EWM27781.1, cds2892 (CDS) Nannochloropsis gaditana

Overview
NameEWM27781.1
Unique Namecds2892
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002460.1:207674..208743 -

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Properties
Property NameValue
Start range207674
Start range.
Protein idEWM27781.1
Producthypothetical protein
Partialtrue
Orig transcript idgnl|cribi|Naga_101837g1.4281.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002460.1supercontigCM002460.1:207674..208743 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM27781.1 vs. NCBI_GenBank
Match: gi|585110068|gb|EWM27781.1| (hypothetical protein Naga_101837g1, partial [Nannochloropsis gaditana])

HSP 1 Score: 661.374 bits (1705), Expect = 0.000e+0
Identity = 356/356 (100.00%), Postives = 356/356 (100.00%), Query Frame = 0 
Query:    1 MAEKQAVLGADGGILPSSSGVSAPPSPLPPPVSLRLDEDVRGGLEVLFRERGRRGRASLTNALCGWKEEEMWAWRWWTCFLMDEEGVGGESGVWGGGGGGCQEAFAEFLREWREERQRRWGKEGDVGGVERDGGGGREEEGEVVVWEVDETEDRLRNRRKLRRRPWASVFFEEGEGGEEWWEEEDVEVAVLLRHLEKGRRLGDLKKGDEEGRDERETRPTSGVEGSEKGKKEEEGAKAVEKANVAPHVSCAPERVMEREGGGGKVLERGTEFVEDGPGRGLWKELVAYQKRSTEKGEEGGEEEEEEGSEETEEEEAGEEEGGKRERKREMEEEGEGVGGGKEQEEVKAKMESHTGI 356
            MAEKQAVLGADGGILPSSSGVSAPPSPLPPPVSLRLDEDVRGGLEVLFRERGRRGRASLTNALCGWKEEEMWAWRWWTCFLMDEEGVGGESGVWGGGGGGCQEAFAEFLREWREERQRRWGKEGDVGGVERDGGGGREEEGEVVVWEVDETEDRLRNRRKLRRRPWASVFFEEGEGGEEWWEEEDVEVAVLLRHLEKGRRLGDLKKGDEEGRDERETRPTSGVEGSEKGKKEEEGAKAVEKANVAPHVSCAPERVMEREGGGGKVLERGTEFVEDGPGRGLWKELVAYQKRSTEKGEEGGEEEEEEGSEETEEEEAGEEEGGKRERKREMEEEGEGVGGGKEQEEVKAKMESHTGI
Sbjct:    1 MAEKQAVLGADGGILPSSSGVSAPPSPLPPPVSLRLDEDVRGGLEVLFRERGRRGRASLTNALCGWKEEEMWAWRWWTCFLMDEEGVGGESGVWGGGGGGCQEAFAEFLREWREERQRRWGKEGDVGGVERDGGGGREEEGEVVVWEVDETEDRLRNRRKLRRRPWASVFFEEGEGGEEWWEEEDVEVAVLLRHLEKGRRLGDLKKGDEEGRDERETRPTSGVEGSEKGKKEEEGAKAVEKANVAPHVSCAPERVMEREGGGGKVLERGTEFVEDGPGRGLWKELVAYQKRSTEKGEEGGEEEEEEGSEETEEEEAGEEEGGKRERKREMEEEGEGVGGGKEQEEVKAKMESHTGI 356
The following BLAST results are available for this feature:
BLAST of EWM27781.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585110068|gb|EWM27781.1|0.000e+0100.00hypothetical protein Naga_101837g1, partial [Nanno... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2900rna2900Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications