EWM27800.1, cds2868 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27800.1 vs. NCBI_GenBank
Match: gi|553177550|ref|XP_005852475.1| (5-hydroxyisourate hydrolase, partial [Nannochloropsis gaditana CCMP526] >gi|553190698|ref|XP_005855242.1| 5-hydroxyisourate hydrolase, partial [Nannochloropsis gaditana CCMP526] >gi|422293818|gb|EKU21118.1| 5-hydroxyisourate hydrolase, partial [Nannochloropsis gaditana CCMP526] >gi|422296058|gb|EKU23357.1| 5-hydroxyisourate hydrolase, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 315.849 bits (808), Expect = 4.499e-109 Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 0 Query: 1 MPASSTTPATSRLTALAAHLSSVSVTSNPKMSPKRSPITSHVLDTTLGKPAQGMPLRLEQQGEHGIGNGNATWTLLGEGLTNADGRVEDLLPSSHTLSPGIYKITFDVAVYFRAINTKSFYPSVTIEFEVERPEEHYHVPLLINPFAYSTYRGS 154 MPASSTTPATSRLTALAAHLSSVSVTSNPKMSPKRSPITSHVLDTTLGKPAQGMPLRLEQQGEHGIGNGNATWTLLGEGLTNADGRVEDLLPSSHTLSPGIYKITFDVAVYFRAINTKSFYPSVTIEFEVERPEEHYHVPLLINPFAYSTYRGS Sbjct: 7 MPASSTTPATSRLTALAAHLSSVSVTSNPKMSPKRSPITSHVLDTTLGKPAQGMPLRLEQQGEHGIGNGNATWTLLGEGLTNADGRVEDLLPSSHTLSPGIYKITFDVAVYFRAINTKSFYPSVTIEFEVERPEEHYHVPLLINPFAYSTYRGS 160
BLAST of EWM27800.1 vs. NCBI_GenBank
Match: gi|585110101|gb|EWM27800.1| (transthyretin family protein [Nannochloropsis gaditana]) HSP 1 Score: 315.464 bits (807), Expect = 6.536e-109 Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 0 Query: 1 MPASSTTPATSRLTALAAHLSSVSVTSNPKMSPKRSPITSHVLDTTLGKPAQGMPLRLEQQGEHGIGNGNATWTLLGEGLTNADGRVEDLLPSSHTLSPGIYKITFDVAVYFRAINTKSFYPSVTIEFEVERPEEHYHVPLLINPFAYSTYRGS 154 MPASSTTPATSRLTALAAHLSSVSVTSNPKMSPKRSPITSHVLDTTLGKPAQGMPLRLEQQGEHGIGNGNATWTLLGEGLTNADGRVEDLLPSSHTLSPGIYKITFDVAVYFRAINTKSFYPSVTIEFEVERPEEHYHVPLLINPFAYSTYRGS Sbjct: 1 MPASSTTPATSRLTALAAHLSSVSVTSNPKMSPKRSPITSHVLDTTLGKPAQGMPLRLEQQGEHGIGNGNATWTLLGEGLTNADGRVEDLLPSSHTLSPGIYKITFDVAVYFRAINTKSFYPSVTIEFEVERPEEHYHVPLLINPFAYSTYRGS 154
BLAST of EWM27800.1 vs. NCBI_GenBank
Match: gi|494030669|ref|WP_006972808.1| (hydroxyisourate hydrolase [Plesiocystis pacifica] >gi|149818610|gb|EDM78056.1| transthyretin family protein [Plesiocystis pacifica SIR-1]) HSP 1 Score: 141.739 bits (356), Expect = 7.066e-41 Identity = 69/120 (57.50%), Postives = 87/120 (72.50%), Query Frame = 0 Query: 35 RSPITSHVLDTTLGKPAQGMPLRLEQQGEHGIGNGNATWTLLGEGLTNADGRVEDLLPSSHTLSPGIYKITFDVAVYFRAINTKSFYPSVTIEFEVERPEEHYHVPLLINPFAYSTYRGS 154 RSPIT+H+LDT LG+PA G+ L L+++ A WT LGEG+TN DGRV DLL + +L G+Y+I F+VA YF +SFYPSV++EFEV +EHYHVPLL+NPF YSTYRGS Sbjct: 3 RSPITTHILDTALGRPAAGVTLTLDRRD-------GAAWTRLGEGVTNDDGRVTDLL-APGSLEAGVYRIEFEVAAYFARTARESFYPSVSVEFEVRATDEHYHVPLLLNPFGYSTYRGS 114
BLAST of EWM27800.1 vs. NCBI_GenBank
Match: gi|1124671823|ref|WP_074950822.1| (hydroxyisourate hydrolase [Myxococcus fulvus] >gi|1095413827|emb|SET52942.1| 5-hydroxyisourate hydrolase [Myxococcus fulvus]) HSP 1 Score: 140.584 bits (353), Expect = 2.623e-40 Identity = 62/119 (52.10%), Postives = 83/119 (69.75%), Query Frame = 0 Query: 36 SPITSHVLDTTLGKPAQGMPLRLEQQGEHGIGNGNATWTLLGEGLTNADGRVEDLLPSSHTLSPGIYKITFDVAVYFRAINTKSFYPSVTIEFEVERPEEHYHVPLLINPFAYSTYRGS 154 S +++HVLDT G+PA G+P+ LE QG HG W L G+TN DGRV D LP+ + G+Y+++FD YFR++ K FYPSV++ FE+ P+EHYHVPLL++PF YSTYRGS Sbjct: 2 STLSTHVLDTHRGRPASGVPITLEAQGAHG------DWKELARGVTNDDGRVRDFLPAGARVETGVYRMSFDTGAYFRSLGVKGFYPSVSVVFELAAPDEHYHVPLLLSPFGYSTYRGS 114
BLAST of EWM27800.1 vs. NCBI_GenBank
Match: gi|819035628|ref|WP_046715761.1| (hydroxyisourate hydrolase [Myxococcus fulvus] >gi|817714135|gb|AKF83336.1| 5-hydroxyisourate hydrolase [Myxococcus fulvus 124B02]) HSP 1 Score: 139.428 bits (350), Expect = 5.516e-40 Identity = 62/119 (52.10%), Postives = 83/119 (69.75%), Query Frame = 0 Query: 36 SPITSHVLDTTLGKPAQGMPLRLEQQGEHGIGNGNATWTLLGEGLTNADGRVEDLLPSSHTLSPGIYKITFDVAVYFRAINTKSFYPSVTIEFEVERPEEHYHVPLLINPFAYSTYRGS 154 S +++HVLDT G+PA G+P+ LE QG HG W L G+TN DGRV D LP+ + G+Y+++FD YFR++ K FYPSV++ FE+ P+EHYHVPLL++PF YSTYRGS Sbjct: 2 STLSTHVLDTHRGRPASGVPITLELQGAHG------DWKELARGVTNDDGRVRDFLPAGARVETGVYRMSFDTGAYFRSLGVKGFYPSVSVVFELAAPDEHYHVPLLLSPFGYSTYRGS 114
BLAST of EWM27800.1 vs. NCBI_GenBank
Match: gi|488716592|ref|WP_002640468.1| (hydroxyisourate hydrolase [Myxococcus hansupus] >gi|891159415|gb|AKQ64100.1| 5-Hydroxyisourate Hydrolase (HIUase) [Myxococcus hansupus]) HSP 1 Score: 139.428 bits (350), Expect = 5.954e-40 Identity = 63/119 (52.94%), Postives = 81/119 (68.07%), Query Frame = 0 Query: 36 SPITSHVLDTTLGKPAQGMPLRLEQQGEHGIGNGNATWTLLGEGLTNADGRVEDLLPSSHTLSPGIYKITFDVAVYFRAINTKSFYPSVTIEFEVERPEEHYHVPLLINPFAYSTYRGS 154 S +++HVLDT G+PA G+P+ LE QG G W L G+TN DGRV D LP + G+Y++TFD YFRA+ + FYPSVT+ FE+ P+EHYHVPLL++PF YSTYRGS Sbjct: 2 STLSTHVLDTNRGRPASGVPITLELQG------GAGEWKELARGVTNDDGRVRDFLPQGSRVETGVYRMTFDTGAYFRALGVRGFYPSVTVLFELTAPDEHYHVPLLLSPFGYSTYRGS 114
BLAST of EWM27800.1 vs. NCBI_GenBank
Match: gi|503704342|ref|WP_013938418.1| (hydroxyisourate hydrolase [Myxococcus fulvus] >gi|337259110|gb|AEI65270.1| transthyretin family protein [Myxococcus fulvus HW-1]) HSP 1 Score: 137.887 bits (346), Expect = 2.750e-39 Identity = 62/119 (52.10%), Postives = 80/119 (67.23%), Query Frame = 0 Query: 36 SPITSHVLDTTLGKPAQGMPLRLEQQGEHGIGNGNATWTLLGEGLTNADGRVEDLLPSSHTLSPGIYKITFDVAVYFRAINTKSFYPSVTIEFEVERPEEHYHVPLLINPFAYSTYRGS 154 S +++HVLDT G+PA G+P+ LE Q + W L G+TN DGRV D LP + PGIY++ FD YFRA+ + FYPSVT+ FE+ P+EHYHVPLL++PF YSTYRGS Sbjct: 2 STLSTHVLDTHRGRPASGVPITLELQ------EASGEWKALARGVTNDDGRVRDFLPQGSRVEPGIYRMAFDTGAYFRALGVRGFYPSVTVVFELTAPDEHYHVPLLLSPFGYSTYRGS 114
BLAST of EWM27800.1 vs. NCBI_GenBank
Match: gi|747219334|gb|KIG18857.1| (5-Hydroxyisourate Hydrolase (HIUase) [Enhygromyxa salina]) HSP 1 Score: 136.732 bits (343), Expect = 1.087e-38 Identity = 70/125 (56.00%), Postives = 86/125 (68.80%), Query Frame = 0 Query: 31 MSPKRSPITSHVLDTTLGKPAQGMPLRLEQQGEHGIGNGNATWTLLGEGLTNADGRVEDLLPSSHTLSPGIYKITFDVAVYFRAINT-KSFYPSVTIEFEVERPEEHYHVPLLINPFAYSTYRGS 154 M+ RSPIT+HVLDT LG+PA G+P+ L + G TW LLG+G TNADGRV DLL ++ +LS G+++I FD AVYF + T + FYP I F V P HYHVPLL+NPF YSTYRGS Sbjct: 1 MTDLRSPITTHVLDTALGRPAAGVPVTLYSVSGVDLDAGEPTWELLGKGTTNADGRVTDLL-AAGSLSEGVHRIRFDTAVYFEQLETPEFFYPWAEIVFLVSDPSAHYHVPLLLNPFGYSTYRGS 124
BLAST of EWM27800.1 vs. NCBI_GenBank
Match: gi|752368754|gb|KIO26543.1| (hypothetical protein M407DRAFT_243663 [Tulasnella calospora MUT 4182]) HSP 1 Score: 134.035 bits (336), Expect = 8.670e-38 Identity = 62/124 (50.00%), Postives = 87/124 (70.16%), Query Frame = 0 Query: 31 MSPKRSPITSHVLDTTLGKPAQGMPLRLEQQGEHGIGNGNATWTLLGEGLTNADGRVEDLLPSSHTLSPGIYKITFDVAVYFRAINTKSFYPSVTIEFEVERPEEHYHVPLLINPFAYSTYRGS 154 M+P RSPIT HVLD LG+PA + +RLEQ E G + +++L G+T++DGR +LL SS LS G+YK+ F+ YF A NT++FYP V I F + P +HYH+PLL++P++Y+TYRGS Sbjct: 1 MAPTRSPITCHVLDAALGRPAANVAVRLEQLQE-----GGSAFSVLANGVTDSDGRCSNLLDSSLRLSTGVYKMIFETGPYFAASNTQTFYPFVEITFNLSDPSQHYHIPLLLSPWSYTTYRGS 119
BLAST of EWM27800.1 vs. NCBI_GenBank
Match: gi|913455041|ref|WP_050434450.1| (hydroxyisourate hydrolase [Chondromyces crocatus] >gi|908360319|gb|AKT42894.1| hydroxyisourate hydrolase [Chondromyces crocatus]) HSP 1 Score: 130.954 bits (328), Expect = 1.685e-36 Identity = 63/120 (52.50%), Postives = 85/120 (70.83%), Query Frame = 0 Query: 35 RSPITSHVLDTTLGKPAQGMPLRLEQQGEHGIGNGNATWTLLGEGLTNADGRVEDLLPSSHTLSPGIYKITFDVAVYFRAINTKSFYPSVTIEFEVERPEEHYHVPLLINPFAYSTYRGS 154 +SPIT+H+LDT+ G+PA G+ + LE + G G TLLG G+T+ADGR+ DLLP S G Y++TF A YF + ++FYPSV++ F++ PEEH+HVPLL+NPF YSTYRGS Sbjct: 3 QSPITTHILDTSRGRPAAGVHVTLEHLNDAGEG------TLLGRGVTDADGRLRDLLPGGVRPSVGTYRLTFATAAYFAELGVEAFYPSVSVVFQLRAPEEHHHVPLLLNPFGYSTYRGS 116 The following BLAST results are available for this feature:
BLAST of EWM27800.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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