EWM27812.1, cds2861 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27812.1 vs. NCBI_GenBank
Match: gi|585110116|gb|EWM27812.1| (Autophagy-related protein [Nannochloropsis gaditana]) HSP 1 Score: 706.442 bits (1822), Expect = 0.000e+0 Identity = 344/344 (100.00%), Postives = 344/344 (100.00%), Query Frame = 0
Query: 1 MVRKRGRWRQAVGIRTHPNGNREVGSQGGAEGAPSVMVPSKEWAQGKIVVIEMHERVVGNGKHRSRKMQERERHQMKKKASLYLVSRSWCSLGRQVIRMFYMFKASSTPCDRFQCMKMPDACDPYILTITGDKITYPRRSQKIFLTFQSPLTFRTIVLYDSSFGVDMMEQDHAHAEQREEKSAVEASSNGTALSSASERTTSNPKTPSSFLSYAPRDASEGLAEGLKSIALGVGAGVAGLVAMPVVGAREKGVSGFFKGLGQGVLGAVVLPTVGVVNGVVEIGAGIVNTPESVNARMEGRSWDEKQRKWIRGGDSHRGRDQESVLQEGSGLPSGSPPGGCRGAR 344
MVRKRGRWRQAVGIRTHPNGNREVGSQGGAEGAPSVMVPSKEWAQGKIVVIEMHERVVGNGKHRSRKMQERERHQMKKKASLYLVSRSWCSLGRQVIRMFYMFKASSTPCDRFQCMKMPDACDPYILTITGDKITYPRRSQKIFLTFQSPLTFRTIVLYDSSFGVDMMEQDHAHAEQREEKSAVEASSNGTALSSASERTTSNPKTPSSFLSYAPRDASEGLAEGLKSIALGVGAGVAGLVAMPVVGAREKGVSGFFKGLGQGVLGAVVLPTVGVVNGVVEIGAGIVNTPESVNARMEGRSWDEKQRKWIRGGDSHRGRDQESVLQEGSGLPSGSPPGGCRGAR
Sbjct: 1 MVRKRGRWRQAVGIRTHPNGNREVGSQGGAEGAPSVMVPSKEWAQGKIVVIEMHERVVGNGKHRSRKMQERERHQMKKKASLYLVSRSWCSLGRQVIRMFYMFKASSTPCDRFQCMKMPDACDPYILTITGDKITYPRRSQKIFLTFQSPLTFRTIVLYDSSFGVDMMEQDHAHAEQREEKSAVEASSNGTALSSASERTTSNPKTPSSFLSYAPRDASEGLAEGLKSIALGVGAGVAGLVAMPVVGAREKGVSGFFKGLGQGVLGAVVLPTVGVVNGVVEIGAGIVNTPESVNARMEGRSWDEKQRKWIRGGDSHRGRDQESVLQEGSGLPSGSPPGGCRGAR 344
BLAST of EWM27812.1 vs. NCBI_GenBank
Match: gi|553188957|ref|XP_005854901.1| (dnaj dnaj protein, partial [Nannochloropsis gaditana CCMP526] >gi|422294160|gb|EKU21460.1| dnaj dnaj protein, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 280.026 bits (715), Expect = 9.258e-92 Identity = 143/145 (98.62%), Postives = 143/145 (98.62%), Query Frame = 0
Query: 167 MMEQDHAHAEQREEKSAVEASSNGTALSSASERTTSNPKTPSSFLSYAPRDASEGLAEGLKSIALGVGAGVAGLVAMPVVGAREKGVSGFFKGLGQGVLGAVVLPTVGVVNGVVEIGAGIVNTPESVNARMEGRSWDEKQRKWIR 311
MMEQDHAHAEQREEKSAVEASSN ALSSASERTTSNPKTPSSFLSYAPRDASEGLAEGLKSIALGVGAGVAGLVAMPVVGAREKGVSGFFKGLGQGVLGAVVLPTVGVVNGVVEIGAGIVNTPESVNARMEGRSWDEKQRKWIR
Sbjct: 1 MMEQDHAHAEQREEKSAVEASSN--ALSSASERTTSNPKTPSSFLSYAPRDASEGLAEGLKSIALGVGAGVAGLVAMPVVGAREKGVSGFFKGLGQGVLGAVVLPTVGVVNGVVEIGAGIVNTPESVNARMEGRSWDEKQRKWIR 143
BLAST of EWM27812.1 vs. NCBI_GenBank
Match: gi|873222138|emb|CEM31897.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 117.472 bits (293), Expect = 2.482e-25 Identity = 55/101 (54.46%), Postives = 72/101 (71.29%), Query Frame = 0
Query: 210 FLSYAPRDASEGLAEGLKSIALGVGAGVAGLVAMPVVGAREKGVSGFFKGLGQGVLGAVVLPTVGVVNGVVEIGAGIVNTPESVNARMEGRSWDEKQRKWI 310
F + P+DA G+A G+KS+ GV AGVA LVA P++GARE+GVSGFFKG GV AV+LP GV +IG GI+NTPE + R +GR WD+K+R+W+
Sbjct: 69 FSTRKPKDAIAGVASGVKSVGKGVLAGVASLVANPIMGAREEGVSGFFKGCAAGVASAVILPVTGVGVACYQIGRGIINTPECIAERTQGRKWDKKKREWV 169
BLAST of EWM27812.1 vs. NCBI_GenBank
Match: gi|159476466|ref|XP_001696332.1| (DnaJ-like protein [Chlamydomonas reinhardtii] >gi|158282557|gb|EDP08309.1| DnaJ-like protein [Chlamydomonas reinhardtii]) HSP 1 Score: 112.849 bits (281), Expect = 6.753e-24 Identity = 55/96 (57.29%), Postives = 70/96 (72.92%), Query Frame = 0
Query: 215 PRDASEGLAEGLKSIALGVGAGVAGLVAMPVVGAREKGVSGFFKGLGQGVLGAVVLPTVGVVNGVVEIGAGIVNTPESVNARMEGRSWDEKQRKWI 310
PRDA GLA GLKSIA G+ G AGLVA P+VGA + GV+GF KGL GV+GAVVLP GV G V++ G++NTPE+V +G+ WDE +R+W+
Sbjct: 37 PRDAGAGLASGLKSIAKGILGGAAGLVAAPIVGASQGGVTGFAKGLASGVVGAVVLPVTGVGVGAVQLVRGVINTPEAVMQSSQGKLWDESRREWV 132
BLAST of EWM27812.1 vs. NCBI_GenBank
Match: gi|1004144167|gb|KXZ52148.1| (hypothetical protein GPECTOR_10g777 [Gonium pectorale]) HSP 1 Score: 108.227 bits (269), Expect = 2.515e-22 Identity = 55/96 (57.29%), Postives = 68/96 (70.83%), Query Frame = 0
Query: 215 PRDASEGLAEGLKSIALGVGAGVAGLVAMPVVGAREKGVSGFFKGLGQGVLGAVVLPTVGVVNGVVEIGAGIVNTPESVNARMEGRSWDEKQRKWI 310
PRDA GLA GLKSIA GV G AGLVA P+VGA+ GV+GF KGL GV+GAVVLP GV G V++ G++NTPE+V + WDE++R W+
Sbjct: 30 PRDAKAGLASGLKSIAKGVLGGAAGLVAAPIVGAQRDGVTGFAKGLASGVVGAVVLPVTGVGVGAVQMVRGVINTPEAVMQASKDMLWDEERRVWV 125
BLAST of EWM27812.1 vs. NCBI_GenBank
Match: gi|760448443|ref|XP_011401290.1| (Chaperone protein dnaJ 10 [Auxenochlorella protothecoides] >gi|675355836|gb|KFM28276.1| Chaperone protein dnaJ 10 [Auxenochlorella protothecoides]) HSP 1 Score: 107.071 bits (266), Expect = 2.533e-22 Identity = 51/103 (49.51%), Postives = 72/103 (69.90%), Query Frame = 0
Query: 208 SSFLSYAPRDASEGLAEGLKSIALGVGAGVAGLVAMPVVGAREKGVSGFFKGLGQGVLGAVVLPTVGVVNGVVEIGAGIVNTPESVNARMEGRSWDEKQRKWI 310
S F P+DA GL+ GLKS+A GV AG GLVA P +GA++ G+ GF KG G G++GAVVLP G+V G ++ G+ NTPE+++A G++WDE++R W+
Sbjct: 20 SVFSLRKPKDARAGLSSGLKSVAKGVLAGTVGLVAAPTIGAQQDGLMGFAKGAGAGLMGAVVLPVAGLVVGTTQLVRGLANTPEAISAARAGKAWDEERRTWV 122
BLAST of EWM27812.1 vs. NCBI_GenBank
Match: gi|1098425633|gb|OII73758.1| (hypothetical protein cubi_03556 [Cryptosporidium ubiquitum]) HSP 1 Score: 108.227 bits (269), Expect = 2.620e-22 Identity = 50/101 (49.50%), Postives = 68/101 (67.33%), Query Frame = 0
Query: 210 FLSYAPRDASEGLAEGLKSIALGVGAGVAGLVAMPVVGAREKGVSGFFKGLGQGVLGAVVLPTVGVVNGVVEIGAGIVNTPESVNARMEGRSWDEKQRKWI 310
F + PRDA G + G+K++ GV AGVA LVA PVVGA +GVSGFFKG+G G++ AV LP V ++ G+ NTPE+++ +GR WD+K R+WI
Sbjct: 96 FSTRRPRDAMAGFSSGMKTVGKGVAAGVATLVAAPVVGAATEGVSGFFKGMGAGIVAAVALPVTAVGVAGYQMARGVANTPEAISESNKGRKWDKKNRQWI 196
BLAST of EWM27812.1 vs. NCBI_GenBank
Match: gi|302829206|ref|XP_002946170.1| (molecular chaperone [Volvox carteri f. nagariensis] >gi|300268985|gb|EFJ53165.1| molecular chaperone [Volvox carteri f. nagariensis]) HSP 1 Score: 107.842 bits (268), Expect = 3.235e-22 Identity = 55/90 (61.11%), Postives = 65/90 (72.22%), Query Frame = 0
Query: 215 PRDASEGLAEGLKSIALGVGAGVAGLVAMPVVGAREKGVSGFFKGLGQGVLGAVVLPTVGVVNGVVEIGAGIVNTPESVNARMEGRSWDE 304
PRDA GLA GLKSIA GV G AGLVA P+VGAR +G++GF KGL QGV+GAVVLP GV G V+ G++NTPE+V G+ WDE
Sbjct: 31 PRDARAGLASGLKSIAKGVLGGAAGLVAAPIVGARSEGLAGFAKGLTQGVIGAVVLPVTGVGVGTVQFVRGVINTPEAVVQAQNGKLWDE 120
BLAST of EWM27812.1 vs. NCBI_GenBank
Match: gi|66360219|ref|XP_627223.1| (DNAJ'DNAJ protein' [Cryptosporidium parvum Iowa II] >gi|46228629|gb|EAK89499.1| DNAJ'DNAJ protein' [Cryptosporidium parvum Iowa II]) HSP 1 Score: 107.457 bits (267), Expect = 4.976e-22 Identity = 50/101 (49.50%), Postives = 67/101 (66.34%), Query Frame = 0
Query: 210 FLSYAPRDASEGLAEGLKSIALGVGAGVAGLVAMPVVGAREKGVSGFFKGLGQGVLGAVVLPTVGVVNGVVEIGAGIVNTPESVNARMEGRSWDEKQRKWI 310
F + PRDA G + G+K++ GV AGVA LVA PVVGA +GVSGFFKG+G G++ AV LP V ++ G+ NTPE++ +GR WD+K R+WI
Sbjct: 96 FSTRRPRDAMAGFSSGMKTVGKGVAAGVATLVAAPVVGAATEGVSGFFKGMGAGLVAAVALPVTAVGVAGYQMARGVANTPEAITESNKGRKWDKKNRQWI 196
BLAST of EWM27812.1 vs. NCBI_GenBank
Match: gi|67624473|ref|XP_668519.1| (hypothetical protein [Cryptosporidium hominis TU502] >gi|961502474|emb|CUV07878.1| unnamed protein product [Cryptosporidium hominis] >gi|1129249154|gb|OLQ17340.1| X-domain of DnaJ-containing [Cryptosporidium hominis]) HSP 1 Score: 107.457 bits (267), Expect = 5.895e-22 Identity = 50/101 (49.50%), Postives = 67/101 (66.34%), Query Frame = 0
Query: 210 FLSYAPRDASEGLAEGLKSIALGVGAGVAGLVAMPVVGAREKGVSGFFKGLGQGVLGAVVLPTVGVVNGVVEIGAGIVNTPESVNARMEGRSWDEKQRKWI 310
F + PRDA G + G+K++ GV AGVA LVA PVVGA +GVSGFFKG+G G++ AV LP V ++ G+ NTPE++ +GR WD+K R+WI
Sbjct: 96 FSTRRPRDAMAGFSSGMKTVGKGVAAGVATLVAAPVVGAATEGVSGFFKGMGAGLVAAVALPVTAVGVAGYQMARGVANTPEAITESNKGRKWDKKNRQWI 196 The following BLAST results are available for this feature:
BLAST of EWM27812.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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