EWM27818.1, cds2855 (CDS) Nannochloropsis gaditana

Overview
NameEWM27818.1
Unique Namecds2855
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002460.1:102837..103084 +
Alignment locationCM002460.1:103243..103261 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM27818.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101639g1.6549.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002460.1supercontigCM002460.1:102837..103084 +
CM002460.1supercontigCM002460.1:103243..103261 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM27818.1 vs. NCBI_GenBank
Match: gi|585110130|gb|EWM27818.1| (hypothetical protein Naga_101639g1 [Nannochloropsis gaditana])

HSP 1 Score: 169.474 bits (428), Expect = 2.795e-53
Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 0 
Query:    1 MLPSPAAPSPSALQTLLVLMIKHVWELYQQDMKEGGKEGGAEGTSEGGKEGGSAFLSLIDLLELLGGTLGDLPTGGPSPPSRPQLPGY 88
            MLPSPAAPSPSALQTLLVLMIKHVWELYQQDMKEGGKEGGAEGTSEGGKEGGSAFLSLIDLLELLGGTLGDLPTGGPSPPSRPQLPGY
Sbjct:    1 MLPSPAAPSPSALQTLLVLMIKHVWELYQQDMKEGGKEGGAEGTSEGGKEGGSAFLSLIDLLELLGGTLGDLPTGGPSPPSRPQLPGY 88
The following BLAST results are available for this feature:
BLAST of EWM27818.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585110130|gb|EWM27818.1|2.795e-53100.00hypothetical protein Naga_101639g1 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2863rna2863Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications