EWM27825.1, cds2848 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27825.1 vs. NCBI_GenBank
Match: gi|585110147|gb|EWM27825.1| (chlorophyll synthase [Nannochloropsis gaditana]) HSP 1 Score: 291.967 bits (746), Expect = 7.440e-100 Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 0
Query: 1 MVVSGDLAGLGIAIVNDFKSIEGDRAMGLQSLPVAFGIDAAKWICVGTIDVTQLGVAGYLAYIGETAYALALLGLILPQIFFQFKYFLKDPIEYDVKYQASAQPFLVLGILTTALAVDKRRGDRKPIYDTGRAPREAIVSLMTRRA 146
MVVSGDLAGLGIAIVNDFKSIEGDRAMGLQSLPVAFGIDAAKWICVGTIDVTQLGVAGYLAYIGETAYALALLGLILPQIFFQFKYFLKDPIEYDVKYQASAQPFLVLGILTTALAVDKRRGDRKPIYDTGRAPREAIVSLMTRRA
Sbjct: 1 MVVSGDLAGLGIAIVNDFKSIEGDRAMGLQSLPVAFGIDAAKWICVGTIDVTQLGVAGYLAYIGETAYALALLGLILPQIFFQFKYFLKDPIEYDVKYQASAQPFLVLGILTTALAVDKRRGDRKPIYDTGRAPREAIVSLMTRRA 146
BLAST of EWM27825.1 vs. NCBI_GenBank
Match: gi|1150730893|ref|XP_020276245.1| (chlorophyll synthase, chloroplastic [Asparagus officinalis]) HSP 1 Score: 186.422 bits (472), Expect = 7.771e-57 Identity = 91/114 (79.82%), Postives = 100/114 (87.72%), Query Frame = 0
Query: 6 DLAGLGIAIVNDFKSIEGDRAMGLQSLPVAFGIDAAKWICVGTIDVTQLGVAGYLAYIGETAYALALLGLILPQIFFQFKYFLKDPIEYDVKYQASAQPFLVLGILTTALAVDK 119
+AGLGIAIVNDFKSIEGDRA+GLQSLPVAFG + AKWICVG ID+TQL +AGYL G+ YALALLGLILPQIFFQFKYFLKDP++YDVKYQASAQPFLVLG+L TALA
Sbjct: 135 SIAGLGIAIVNDFKSIEGDRALGLQSLPVAFGAETAKWICVGAIDITQLSIAGYLLGAGKPYYALALLGLILPQIFFQFKYFLKDPVKYDVKYQASAQPFLVLGLLVTALATSH 248
BLAST of EWM27825.1 vs. NCBI_GenBank
Match: gi|1141981433|gb|ONK62656.1| (uncharacterized protein A4U43_C07F6500 [Asparagus officinalis]) HSP 1 Score: 187.963 bits (476), Expect = 5.339e-56 Identity = 91/114 (79.82%), Postives = 100/114 (87.72%), Query Frame = 0
Query: 6 DLAGLGIAIVNDFKSIEGDRAMGLQSLPVAFGIDAAKWICVGTIDVTQLGVAGYLAYIGETAYALALLGLILPQIFFQFKYFLKDPIEYDVKYQASAQPFLVLGILTTALAVDK 119
+AGLGIAIVNDFKSIEGDRA+GLQSLPVAFG + AKWICVG ID+TQL +AGYL G+ YALALLGLILPQIFFQFKYFLKDP++YDVKYQASAQPFLVLG+L TALA
Sbjct: 252 SIAGLGIAIVNDFKSIEGDRALGLQSLPVAFGAETAKWICVGAIDITQLSIAGYLLGAGKPYYALALLGLILPQIFFQFKYFLKDPVKYDVKYQASAQPFLVLGLLVTALATSH 365
BLAST of EWM27825.1 vs. NCBI_GenBank
Match: gi|1109228752|ref|XP_019189084.1| (PREDICTED: chlorophyll synthase, chloroplastic-like [Ipomoea nil]) HSP 1 Score: 187.578 bits (475), Expect = 8.261e-56 Identity = 91/114 (79.82%), Postives = 99/114 (86.84%), Query Frame = 0
Query: 6 DLAGLGIAIVNDFKSIEGDRAMGLQSLPVAFGIDAAKWICVGTIDVTQLGVAGYLAYIGETAYALALLGLILPQIFFQFKYFLKDPIEYDVKYQASAQPFLVLGILTTALAVDK 119
+AGLGIAIVNDFKSIEGDRAMGLQSLPVAFG + AKWICVG ID+TQL VAGYL +G+ YALALLGL PQIFFQFKYFLKDP++YDVKYQASAQPFLVLG+L TALA
Sbjct: 259 SIAGLGIAIVNDFKSIEGDRAMGLQSLPVAFGSETAKWICVGAIDLTQLSVAGYLFSVGKPYYALALLGLTAPQIFFQFKYFLKDPVKYDVKYQASAQPFLVLGLLVTALATSH 372
BLAST of EWM27825.1 vs. NCBI_GenBank
Match: gi|1040866511|ref|XP_017243789.1| (PREDICTED: chlorophyll synthase, chloroplastic [Daucus carota subsp. sativus] >gi|1021039463|gb|KZM97244.1| hypothetical protein DCAR_015394 [Daucus carota subsp. sativus]) HSP 1 Score: 187.578 bits (475), Expect = 9.573e-56 Identity = 90/114 (78.95%), Postives = 99/114 (86.84%), Query Frame = 0
Query: 6 DLAGLGIAIVNDFKSIEGDRAMGLQSLPVAFGIDAAKWICVGTIDVTQLGVAGYLAYIGETAYALALLGLILPQIFFQFKYFLKDPIEYDVKYQASAQPFLVLGILTTALAVDK 119
+AGLGIAIVNDFKS+EGDRAMGLQSLPVAFG + AKWICVG IDVTQL VAGYL G+ YALALLGLI PQ+FFQFKYFLKDP++YDVKYQASAQPFL+LG+L TALA
Sbjct: 261 SIAGLGIAIVNDFKSVEGDRAMGLQSLPVAFGFETAKWICVGAIDVTQLSVAGYLLGAGKPYYALALLGLIAPQVFFQFKYFLKDPVKYDVKYQASAQPFLILGLLVTALATSH 374
BLAST of EWM27825.1 vs. NCBI_GenBank
Match: gi|338173751|gb|AEI83422.1| (chlorophyll synthase [Camellia sinensis]) HSP 1 Score: 187.578 bits (475), Expect = 1.150e-55 Identity = 90/114 (78.95%), Postives = 100/114 (87.72%), Query Frame = 0
Query: 6 DLAGLGIAIVNDFKSIEGDRAMGLQSLPVAFGIDAAKWICVGTIDVTQLGVAGYLAYIGETAYALALLGLILPQIFFQFKYFLKDPIEYDVKYQASAQPFLVLGILTTALAVDK 119
+AGLGIAIVNDFKS+EGDRA+GLQSLPVAFG + AKWICVG IDVTQL VAGYL G+ YALALLGLILPQ+FFQFKYFLKDP++YDVKYQASAQPFL+LG+L TALA
Sbjct: 261 SIAGLGIAIVNDFKSVEGDRALGLQSLPVAFGSETAKWICVGAIDVTQLSVAGYLLGAGKPFYALALLGLILPQVFFQFKYFLKDPVKYDVKYQASAQPFLILGLLVTALATSH 374
BLAST of EWM27825.1 vs. NCBI_GenBank
Match: gi|743066343|gb|AJB84630.1| (chlorophyll synthase [Camellia sinensis]) HSP 1 Score: 187.578 bits (475), Expect = 1.175e-55 Identity = 90/114 (78.95%), Postives = 100/114 (87.72%), Query Frame = 0
Query: 6 DLAGLGIAIVNDFKSIEGDRAMGLQSLPVAFGIDAAKWICVGTIDVTQLGVAGYLAYIGETAYALALLGLILPQIFFQFKYFLKDPIEYDVKYQASAQPFLVLGILTTALAVDK 119
+AGLGIAIVNDFKS+EGDRA+GLQSLPVAFG + AKWICVG IDVTQL VAGYL G+ YALALLGLILPQ+FFQFKYFLKDP++YDVKYQASAQPFL+LG+L TALA
Sbjct: 261 SIAGLGIAIVNDFKSVEGDRALGLQSLPVAFGSETAKWICVGAIDVTQLSVAGYLLGAGKPFYALALLGLILPQVFFQFKYFLKDPVKYDVKYQASAQPFLILGLLVTALATSH 374
BLAST of EWM27825.1 vs. NCBI_GenBank
Match: gi|1025181798|ref|XP_016473005.1| (PREDICTED: chlorophyll synthase, chloroplastic-like [Nicotiana tabacum]) HSP 1 Score: 187.193 bits (474), Expect = 1.376e-55 Identity = 90/114 (78.95%), Postives = 100/114 (87.72%), Query Frame = 0
Query: 6 DLAGLGIAIVNDFKSIEGDRAMGLQSLPVAFGIDAAKWICVGTIDVTQLGVAGYLAYIGETAYALALLGLILPQIFFQFKYFLKDPIEYDVKYQASAQPFLVLGILTTALAVDK 119
+AGLGIAIVNDFKSIEGDRAMGLQSLPVAFG +AAKWICVG ID+TQ+ VAGYL G+ YALALLGLI PQ+FFQFKYFLKDP++YDVKYQASAQPFL+LG+L TALA
Sbjct: 260 SVAGLGIAIVNDFKSIEGDRAMGLQSLPVAFGSEAAKWICVGAIDITQISVAGYLLGAGKPYYALALLGLIAPQVFFQFKYFLKDPVKYDVKYQASAQPFLILGLLVTALATSH 373
BLAST of EWM27825.1 vs. NCBI_GenBank
Match: gi|697106201|ref|XP_009606938.1| (PREDICTED: chlorophyll synthase, chloroplastic [Nicotiana tomentosiformis]) HSP 1 Score: 187.193 bits (474), Expect = 1.376e-55 Identity = 90/114 (78.95%), Postives = 100/114 (87.72%), Query Frame = 0
Query: 6 DLAGLGIAIVNDFKSIEGDRAMGLQSLPVAFGIDAAKWICVGTIDVTQLGVAGYLAYIGETAYALALLGLILPQIFFQFKYFLKDPIEYDVKYQASAQPFLVLGILTTALAVDK 119
+AGLGIAIVNDFKSIEGDRAMGLQSLPVAFG +AAKWICVG ID+TQ+ VAGYL G+ YALALLGLI PQ+FFQFKYFLKDP++YDVKYQASAQPFL+LG+L TALA
Sbjct: 260 SVAGLGIAIVNDFKSIEGDRAMGLQSLPVAFGSEAAKWICVGAIDITQISVAGYLLGAGKPYYALALLGLIAPQVFFQFKYFLKDPVKYDVKYQASAQPFLILGLLVTALATSH 373
BLAST of EWM27825.1 vs. NCBI_GenBank
Match: gi|228535376|gb|ACQ44245.1| (chlorophyll synthase [Nicotiana tabacum]) HSP 1 Score: 186.808 bits (473), Expect = 1.783e-55 Identity = 90/114 (78.95%), Postives = 100/114 (87.72%), Query Frame = 0
Query: 6 DLAGLGIAIVNDFKSIEGDRAMGLQSLPVAFGIDAAKWICVGTIDVTQLGVAGYLAYIGETAYALALLGLILPQIFFQFKYFLKDPIEYDVKYQASAQPFLVLGILTTALAVDK 119
+AGLGIAIVNDFKSIEGDRAMGLQSLPVAFG +AAKWICVG ID+TQ+ VAGYL G+ YALALLGLI PQ+FFQFKYFLKDP++YDVKYQASAQPFL+LG+L TALA
Sbjct: 260 SVAGLGIAIVNDFKSIEGDRAMGLQSLPVAFGSEAAKWICVGAIDITQISVAGYLLGAGKPYYALALLGLIAPQVFFQFKYFLKDPVKYDVKYQASAQPFLILGLLVTALATSH 373 The following BLAST results are available for this feature:
BLAST of EWM27825.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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