EWM27870.1, cds2803 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27870.1 vs. NCBI_GenBank
Match: gi|585110200|gb|EWM27870.1| (cof-like hydrolase [Nannochloropsis gaditana]) HSP 1 Score: 841.647 bits (2173), Expect = 0.000e+0 Identity = 419/419 (100.00%), Postives = 419/419 (100.00%), Query Frame = 0
Query: 1 MHGYMSITIFLTVMMANSSFRAVARTNLHVHVVRSTAWLAHRPSSMRPTDRLKSSSISSAAPSPFSSASHPYTSPIVLVASDVDGTLLGSSHTISPRTIASIRALRKKGILFVPATGKSRGGVRNALGALGEELTSSMATGGVYLQGLIVYKGGEVIYERMLDPQVALDVMRFARERNVSLIAFNGDRILCEKMDATIASVTQQHEPMPVVVSLEAFLLASCHSLGPASAPSSSSTPSVKVSVTTSTSSPTSTASSVQPPPPVAATAVYASSRTPHSPQAPAPSSSNRTESTSIHKLILLGPPPLMASLRPALESFLGPRASITKAQDDMLEVLPSGGSKGLGLRKLLEALDVPTSRILAIGDQENDLEMLKMAGTAVAMGNAPRHVKAVAGHSTRSNDEDGAARAFERFCLQELSGLI 419
MHGYMSITIFLTVMMANSSFRAVARTNLHVHVVRSTAWLAHRPSSMRPTDRLKSSSISSAAPSPFSSASHPYTSPIVLVASDVDGTLLGSSHTISPRTIASIRALRKKGILFVPATGKSRGGVRNALGALGEELTSSMATGGVYLQGLIVYKGGEVIYERMLDPQVALDVMRFARERNVSLIAFNGDRILCEKMDATIASVTQQHEPMPVVVSLEAFLLASCHSLGPASAPSSSSTPSVKVSVTTSTSSPTSTASSVQPPPPVAATAVYASSRTPHSPQAPAPSSSNRTESTSIHKLILLGPPPLMASLRPALESFLGPRASITKAQDDMLEVLPSGGSKGLGLRKLLEALDVPTSRILAIGDQENDLEMLKMAGTAVAMGNAPRHVKAVAGHSTRSNDEDGAARAFERFCLQELSGLI
Sbjct: 1 MHGYMSITIFLTVMMANSSFRAVARTNLHVHVVRSTAWLAHRPSSMRPTDRLKSSSISSAAPSPFSSASHPYTSPIVLVASDVDGTLLGSSHTISPRTIASIRALRKKGILFVPATGKSRGGVRNALGALGEELTSSMATGGVYLQGLIVYKGGEVIYERMLDPQVALDVMRFARERNVSLIAFNGDRILCEKMDATIASVTQQHEPMPVVVSLEAFLLASCHSLGPASAPSSSSTPSVKVSVTTSTSSPTSTASSVQPPPPVAATAVYASSRTPHSPQAPAPSSSNRTESTSIHKLILLGPPPLMASLRPALESFLGPRASITKAQDDMLEVLPSGGSKGLGLRKLLEALDVPTSRILAIGDQENDLEMLKMAGTAVAMGNAPRHVKAVAGHSTRSNDEDGAARAFERFCLQELSGLI 419
BLAST of EWM27870.1 vs. NCBI_GenBank
Match: gi|553195446|ref|XP_005856148.1| (cof-like hydrolase [Nannochloropsis gaditana CCMP526] >gi|422292915|gb|EKU20216.1| cof-like hydrolase [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 747.273 bits (1928), Expect = 0.000e+0 Identity = 374/374 (100.00%), Postives = 374/374 (100.00%), Query Frame = 0
Query: 46 MRPTDRLKSSSISSAAPSPFSSASHPYTSPIVLVASDVDGTLLGSSHTISPRTIASIRALRKKGILFVPATGKSRGGVRNALGALGEELTSSMATGGVYLQGLIVYKGGEVIYERMLDPQVALDVMRFARERNVSLIAFNGDRILCEKMDATIASVTQQHEPMPVVVSLEAFLLASCHSLGPASAPSSSSTPSVKVSVTTSTSSPTSTASSVQPPPPVAATAVYASSRTPHSPQAPAPSSSNRTESTSIHKLILLGPPPLMASLRPALESFLGPRASITKAQDDMLEVLPSGGSKGLGLRKLLEALDVPTSRILAIGDQENDLEMLKMAGTAVAMGNAPRHVKAVAGHSTRSNDEDGAARAFERFCLQELSGLI 419
MRPTDRLKSSSISSAAPSPFSSASHPYTSPIVLVASDVDGTLLGSSHTISPRTIASIRALRKKGILFVPATGKSRGGVRNALGALGEELTSSMATGGVYLQGLIVYKGGEVIYERMLDPQVALDVMRFARERNVSLIAFNGDRILCEKMDATIASVTQQHEPMPVVVSLEAFLLASCHSLGPASAPSSSSTPSVKVSVTTSTSSPTSTASSVQPPPPVAATAVYASSRTPHSPQAPAPSSSNRTESTSIHKLILLGPPPLMASLRPALESFLGPRASITKAQDDMLEVLPSGGSKGLGLRKLLEALDVPTSRILAIGDQENDLEMLKMAGTAVAMGNAPRHVKAVAGHSTRSNDEDGAARAFERFCLQELSGLI
Sbjct: 1 MRPTDRLKSSSISSAAPSPFSSASHPYTSPIVLVASDVDGTLLGSSHTISPRTIASIRALRKKGILFVPATGKSRGGVRNALGALGEELTSSMATGGVYLQGLIVYKGGEVIYERMLDPQVALDVMRFARERNVSLIAFNGDRILCEKMDATIASVTQQHEPMPVVVSLEAFLLASCHSLGPASAPSSSSTPSVKVSVTTSTSSPTSTASSVQPPPPVAATAVYASSRTPHSPQAPAPSSSNRTESTSIHKLILLGPPPLMASLRPALESFLGPRASITKAQDDMLEVLPSGGSKGLGLRKLLEALDVPTSRILAIGDQENDLEMLKMAGTAVAMGNAPRHVKAVAGHSTRSNDEDGAARAFERFCLQELSGLI 374
BLAST of EWM27870.1 vs. NCBI_GenBank
Match: gi|873239482|emb|CEL94356.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 171.785 bits (434), Expect = 1.371e-45 Identity = 117/343 (34.11%), Postives = 168/343 (48.98%), Query Frame = 0
Query: 73 TSPIVLVASDVDGTLLGSSHTISPRTIASIRALRKKGILFVPATGKSRGGVRNALG-ALGEELTSSMATGGVYLQGLIVY--KG-GEVIYERMLDPQVALDVMRFARERNVSLIAFNGDRILCEKMDATIASVTQQHEPMPVVVSLEAFLLASCHSLGPASAPSSSSTPSVKVSVTTSTSSPTSTASSVQPPPPVAATAVYASSRTPHSPQAPAPSSSNRTESTSIHKLILLGPPPLMASLRPALESFLGPRASITKAQDDMLEVLPSGGSKGLGLRKLLEALDVPTSRILAIGDQENDLEMLKMAGTAVAMGNAPRHVKAVAGHSTRSNDEDGAARAFERFC 411
TS I +A+D DGT L SSH SP + + R ++G PATG+SR G NA+G LGEEL + GVYL GL+VY G ++++ R +D + V+ R S +A++GD ILCE+ + EP P H +GP T +++ T+ SS T + Q ++K I+L + +LR +E L +A+IT+A MLE+LP G SKG G+R+L+E + + +LA+GD END EML +AG +VA NA V++VA H SND+DG + A ER C
Sbjct: 77 TSVIRAIATDFDGTFLNSSHGCSPANVWAYREAMRRGYAIFPATGRSRPGAFNAMGQVLGEELRRE-GSPGVYLNGLLVYGPDGPNDLVFTRTMDAATSESVVEMCRSLEASFVAYSGDAILCEQRTHHTDRLATYKEPRP-------------HPIGPL-------TDALRGRDTSRESSGTRGVRNGQG-------------------------------ELLVNKFIILDEAERIDALRGWVEGRLAGKATITQALPTMLEILPLGASKGDGVRRLMEHMQMDLRHMLALGDAENDKEMLTLAGHSVATANAHASVRSVAQHLVSSNDQDGFSEALERLC 367
BLAST of EWM27870.1 vs. NCBI_GenBank
Match: gi|1026769833|gb|OAE29726.1| (hypothetical protein AXG93_3884s1220 [Marchantia polymorpha subsp. ruderalis]) HSP 1 Score: 157.147 bits (396), Expect = 1.035e-38 Identity = 115/367 (31.34%), Postives = 178/367 (48.50%), Query Frame = 0
Query: 54 SSSISSAAPSPFSSASHPYTSPIVLVASDVDGTLLGSSHTISPRTIASIRALRKKGILFVPATGKSRGGVRNAL---GALGEELTSSMATGGVYLQGLIVY-KGGEVIYERMLDPQVALDVMRFARERNVSLIAFNGDRILCEKMDATIASVTQQHEPMPVV--VSLEAFLLASCHSLGPASAPSSSSTPSVKVSVTTSTSSPTSTASSVQPPPPVAATAVYASSRTPHSPQAPAPSSSNRTESTSIHKLILL--GPPPLMASLRPALESFLGPRASITKAQDDMLEVLPSGGSKGLGLRKLLEALDVPTSRILAIGDQENDLEMLKMAGTAVAMGNAPRHVKAVAGHSTRSNDEDGAARAFERFCL 412
+ S +S S P + ++ D+DGTLL S IS T ++ A+ KG+ + ATGK+R G AL G +GE S+ GV+ QGL VY +GG VI+ +LDP+V + + ++ E+++ + F+ +RI+ +H V+ V LE P V + T+ + + P+ V+ ++ + ++ T + + + +L P + +RP + RA++ +A DDMLE+LP G SKG G++ LL+ L V I+AIGD END+EML++AG VAM N + K VA T SNDEDGAA AF R+ L
Sbjct: 283 NGSTTSGGRSLDGKIRRPPKAGFKILFCDMDGTLLNSKSRISDATRDALNAVLAKGVQVIIATGKTRHGAMAALDPVGLVGENGVISLKHPGVFTQGLQVYGRGGSVIHSAVLDPEVVQEALTYSLEKSIPSVGFSDNRIV----------TLFRHSLTDVLHTVYLE---------------------PKVNL---IRTAEVIPSLRDLMESCPIQGMHVHQGHQSRVRSRVYCMCRADGTVTVVLEQKLLFYSTPEDIKYKIRPYWAENVRGRATLVQALDDMLEILPPGQSKGAGVKLLLDNLGVHPEEIMAIGDGENDIEMLELAGWGVAMANGSKRTKEVADAQTSSNDEDGAAEAFHRYIL 615
BLAST of EWM27870.1 vs. NCBI_GenBank
Match: gi|1004138756|gb|KXZ46768.1| (hypothetical protein GPECTOR_41g733 [Gonium pectorale]) HSP 1 Score: 137.887 bits (346), Expect = 5.106e-34 Identity = 109/340 (32.06%), Postives = 155/340 (45.59%), Query Frame = 0
Query: 76 IVLVASDVDGTLLGSSHTISPRTIASIRALRKKGILFVPATGKSRG-GVRNALGALGEELTSSMATGGVYLQGLIVYKG-GEVIYERMLDPQVALDVMRFARERNVSLIAFNGDRILCEKMDATIASVTQQHEPMPVVVSLEAFLLASCHSLGPASAPSSSSTPSVKVSVTTSTSSPTSTASSVQPPPPVAATAVYASSRTPHSPQAPAPSSSNRTESTSIHKLILLGPPPLMASLRPALESFLGPRASITKAQDDMLEVLPSGGSKGLGLRKLLEALDVPTSRILAIGDQENDLEMLKMAGTAVAMGNAPRHVKAVAGHS-TRSNDEDGAARAFERFCL 412
I L+A+DVDGTLL ++ +++ G+ V ATGK+RG + + L L + T GV+LQGL+VY G G V++E+ L +VA D +R L +++D T L+A C + + +T + T + + PPP P +HK+I + + +RP +ES LG RAS+T A MLEVLP G SKG GLR LL+ L V + ++A+GD END+EML M G VAMGNA KA A +ND+DG ARA E + +
Sbjct: 8 IRLIATDVDGTLLNHRQELTSGVEYAVKQAAALGVPLVFATGKARGPWIHDVLPRL------DLDTPGVFLQGLVVYDGQGAVLHEQRLPDEVATDCIR-----------------LAKELDVT--------------------LVAYCG----------------ERILCAATDAHTERFNFYREPPP-----------------EPVGDLGAILGRVPVHKMIFMAEQARIDEIRPGVESLLGGRASLTTALSGMLEVLPLGASKGAGLRWLLDHLGVDPAHVMALGDGENDVEMLAMVGLGVAMGNAAPKAKASADVVLEETNDQDGVARAIEEYVV 271
BLAST of EWM27870.1 vs. NCBI_GenBank
Match: gi|159476616|ref|XP_001696407.1| (haloacid dehalogenase-like hydrolase [Chlamydomonas reinhardtii] >gi|158282632|gb|EDP08384.1| haloacid dehalogenase-like hydrolase [Chlamydomonas reinhardtii] >gi|294845973|gb|ADF43132.1| HDH1p [Chlamydomonas reinhardtii]) HSP 1 Score: 134.42 bits (337), Expect = 2.247e-32 Identity = 113/340 (33.24%), Postives = 155/340 (45.59%), Query Frame = 0
Query: 76 IVLVASDVDGTLLGSSHTISPRTIASIRALRKKGILFVPATGKSRG-GVRNALGALGEELTSSMATGGVYLQGLIVYKGGEVIYERMLDPQVALDVMRFARERNVSLIAFNGDRILCEKMDATIASVTQQHEPMPVVVSLEAFLLASCHSLGPASAPSSSSTPSVKVSVTTSTSSPTSTASSVQPPPPVAATAVYASSRTPHSPQAPAPSSSNRTESTSIHKLILLGPPPLMASLRPALESFLGPRASITKAQDDMLEVLPSGGSKGLGLRKLLEALDVPTSRILAIGDQENDLEMLKMAGTAVAMGNAPRHVKAVAGHS-TRSNDEDGAARAFERFCLQ 413
I L+ +DVDGTLL SS +SPR A+++ R G+ V ATGK+RG + L LG +L T GV++QGL ++Y+ D R ER LCE + + + + + L A C + +T T + PPP P A A +HK+I + + +LRPA E+ L RAS+T A MLEVLP GGSKG GL LL+ L V ++LA+GD END+EML++AG VAMGNA +A A +ND+DG A A +RF L+
Sbjct: 42 IRLIVTDVDGTLLDSSQQLSPRVEAAVKEARAHGVPLVIATGKARGPWTADVL--LGLQLD----TPGVFMQGL-------IVYD---------DQGRVLHERR-----------LCEDV---------ARDCITLAADVGVTLTAYCGDR----------------ILCAATDVHTDRLLFYKEPPP-----------EPVGDLAAALGGGG----VPVHKMIFMADQDRIDALRPAAEALLDGRASLTTALTGMLEVLPLGGSKGAGLSWLLDWLGVAPEQVLALGDGENDVEMLQLAGLGVAMGNAGPKARAAADVVLAATNDQDGVAEAIQRFVLE 308
BLAST of EWM27870.1 vs. NCBI_GenBank
Match: gi|970045907|ref|XP_015084443.1| (PREDICTED: uncharacterized protein LOC107027907 isoform X1 [Solanum pennellii]) HSP 1 Score: 138.658 bits (348), Expect = 3.138e-32 Identity = 111/346 (32.08%), Postives = 156/346 (45.09%), Query Frame = 0
Query: 72 YTSPIVLVASDVDGTLLGSSHTISPRTIASIRALRKKGILFVPATGKSRGG---VRNALGALGEELTSSMATGGVYLQGLIVY-KGGEVIYERMLDPQVALDVMRFARERNVSLIAFNGDRILCEKMDATIASVTQQHEPMPVVVSLEAFLLASCHSLGPASAPSSSSTPSVKVSVTTSTSSPTSTASSVQPPPPVAATAVYASSRTPHSPQAPAPSSSNRTESTSIHKLILLGPPPLMAS-LRPALESFLGPRASITKAQDDMLEVLPSGGSKGLGLRKLLEALDVPTSRILAIGDQENDLEMLKMAGTAVAMGNAPRHVKAVAGHSTRSNDEDGAARAFERFCL 412
Y + D+DGTLL S IS T ++R +G+ V ATGK+R + ++G G++ S + GV++QGL+VY + G I LDP V + ++ E + L AF+ DRI T H P L+ S H++ + P + PSV+ +T T I K+I ++S LRP E LG AS+ +AQ DMLE++P G SKG G++ LL+ L V I+AIGD END+EMLK+A VA+ N KAVA SNDE+GAA A R+
Sbjct: 311 YRPKFSYIFCDMDGTLLNSKSQISSATAEALREATSRGVKVVIATGKTRPAAITLLKSVGLAGKDGIVSEISPGVFVQGLLVYGRQGREISRTNLDPVVCREACLYSLEHKIPLAAFSEDRIF-----------TLFHHP----------LVDSLHTI--YNEPKAEIIPSVEQLLT----------------------------------------------GTDIQKVIFFDTVEGVSSTLRPYWEESLGDNASVVQAQPDMLEIVPPGSSKGSGVKILLDHLGVSPKEIMAIGDGENDVEMLKLASLGVALSNGSEKAKAVADVIGASNDENGAADAIYRYAF 587
BLAST of EWM27870.1 vs. NCBI_GenBank
Match: gi|294846015|gb|ADF43173.1| (HDH1m [Chlamydomonas reinhardtii]) HSP 1 Score: 134.035 bits (336), Expect = 3.353e-32 Identity = 117/340 (34.41%), Postives = 158/340 (46.47%), Query Frame = 0
Query: 76 IVLVASDVDGTLLGSSHTISPRTIASIRALRKKGILFVPATGKSRG-GVRNALGALGEELTSSMATGGVYLQGLIVYKGGEVIYERMLDPQVALDVMRFARERNVSLIAFNGDRILCEKMDATIASVTQQHEPMPVVVSLEAFLLASCHSLGPASAPSSSSTPSVKVSVTTSTSSPTSTASSVQPPPPVAATAVYASSRTPHSPQAPAPSSSNRTESTSIHKLILLGPPPLMASLRPALESFLGPRASITKAQDDMLEVLPSGGSKGLGLRKLLEALDVPTSRILAIGDQENDLEMLKMAGTAVAMGNAPRHVKAVAGHS-TRSNDEDGAARAFERFCLQ 413
I L+ +DVDGTLL SS +SPR A+++ R G+ V ATGK+RG + L LG +L T GV++QGL ++Y+ D R ER LCE D +T + V V+L A+ C + +T T + PPP P A A +HK+I + + +LRPA E+ L RAS+T A MLEVLP GGSKG GL LL+ L V ++LA+GD END+EML++AG VAMGNA +A A +ND+DG A A +RF L+
Sbjct: 42 IRLIVTDVDGTLLDSSQQLSPRVEAAVKEARALGVPLVIATGKARGPWTADVL--LGLQLD----TPGVFMQGL-------IVYD---------DQGRVLHERR-----------LCE--DVARDCITLAAD---VGVTLTAY----CGDR----------------ILCAATDVHTDRLLFYKEPPP-----------EPVGDLAAALGGGG----VPVHKMIFMADQDRIDALRPAAEALLDGRASLTTALTGMLEVLPLGGSKGAGLSWLLDWLGVAPEQVLALGDGENDVEMLQLAGLGVAMGNAGPKARAAADVVLAATNDQDGVAEAIQRFVLE 308
BLAST of EWM27870.1 vs. NCBI_GenBank
Match: gi|255086611|ref|XP_002509272.1| (predicted protein [Micromonas commoda] >gi|226524550|gb|ACO70530.1| predicted protein [Micromonas commoda]) HSP 1 Score: 122.094 bits (305), Expect = 1.583e-27 Identity = 110/337 (32.64%), Postives = 157/337 (46.59%), Query Frame = 0
Query: 82 DVDGTLLGSSHTISPRTIASIRALRKKGILFVPATGKSRGGVRNAL---GALGEELTSSMATGGVYLQGLIVY-KGGEVIYERMLDPQVALDVMRFARERNVSLIAFNGDRILCEKMDATIASVTQQHEPMPVVVSLEAFLLASCHSLGPASAPSSSSTPSVKVSVTTSTSSPTSTASSVQPPPPVAATAVYASSRTPHSPQAPAPSSSNRTESTSIHKLILLGP-PPLMASLRPALESFLGPRASITKAQDDMLEVLPSGGSKGLGLRKLLEALDVPTSRILAIGDQENDLEMLKMAGTAVAMGNAPRHVKAVAGHS-TRSNDEDGAARAFERFCL 412
D+DGTLL I+PRT ++R G++ ATGK+R A G G++ S + GV++QGL VY + G+ IY+ ++ DV+R A L+ G + V+L AF C +L AS P S+ P VA V + H+ A ++ ++ + KL+L+ + RP E+ G RA +T+A +MLE+LP G K G+R LL LDV SR++A+GD ENDL ML++ G VAMGNA VKA A + +NDEDG A A +RF L
Sbjct: 89 DLDGTLLNRECVITPRTAEALRECAAAGVVVFIATGKARPAAIRAAATAGLDGDDGVVSRKSPGVFIQGLDVYGREGDPIYK----AEMPHDVVREA----FGLVYGQG---------------------LSTKVALTAFCGDECATL--ASHPLLDELSSL-----------------YHEPKSVAWDDV---DQLVHAANAAFGGNAT---ASGVQKLLLMAETAEEIDDARPRWEALFGSRAEVTQAVPNMLEILPLGNDKARGVRTLLTHLDVDVSRVVAVGDGENDLGMLRLVGRGVAMGNAGAKVKAAARETLAATNDEDGVAEAIQRFVL 371
BLAST of EWM27870.1 vs. NCBI_GenBank
Match: gi|922869849|gb|KOO35873.1| (haloacid dehalogenase-like hydrolase [Chrysochromulina sp. CCMP291]) HSP 1 Score: 117.472 bits (293), Expect = 4.853e-27 Identity = 69/151 (45.70%), Postives = 95/151 (62.91%), Query Frame = 0
Query: 266 TAVYASSRTPHSPQAPAPSSSNRTESTSIHKLILLGPPPLMASLRPALESFLGPRASITKAQDDMLEVLPSGGSKGLGLRKLLEALDVPTSRILAIGDQENDLEMLKMAGTAVAMGNAPRHVKAVAGHSTRSNDEDGAARAFERFCLQELS 416
T + + R P +P A P + ++KLI+L P + LRP L + LG ASIT+A +MLEVLP GGSKG G+R LLE + + ++A+GD END+ ML++AG +VAMGNA VKA+A H T +N +DGAA A E+ L+ S
Sbjct: 84 TDILVAYRDP-TPIAAGPWQRIAADE-PVNKLIILAPRERVLELRPLLAARLGDSASITQAVPEMLEVLPRGGSKGTGVRALLERTGIAAADMMAMGDAENDIGMLELAGLSVAMGNAADAVKAIAQHVTATNVDDGAADAIEKHVLRYFS 232 HSP 2 Score: 78.9518 bits (193), Expect = 2.962e-13 Identity = 43/96 (44.79%), Postives = 57/96 (59.38%), Query Frame = 0
Query: 117 GKSRGGVRNALGALGEELTSSMATGGVYLQGLIVYK--GGEVIYERMLDPQVALDVMRFARERNVSLIAFNGDRILCEKMDATIASVTQQHEPMPV 210
G+ R G ALG +G+ L A G V+L GL+VY G E+I+E+ L P+V LDV FA E+ SL AF+GDRILC K D + +P P+
Sbjct: 2 GRGRAGAYRALGPIGDRLMREGAAG-VFLNGLLVYGPGGEELIFEQRLPPEVVLDVADFAAEQKGSLTAFSGDRILCNKRDQYTDILVAYRDPTPI 96 The following BLAST results are available for this feature:
BLAST of EWM27870.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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