EWM30412.1, cds280 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM30412.1 vs. NCBI_GenBank
Match: gi|585113072|gb|EWM30412.1| (sugar transporter [Nannochloropsis gaditana]) HSP 1 Score: 310.071 bits (793), Expect = 1.107e-106 Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 0
Query: 1 MDRAAEPDSSFARYQDLQMLDFVFAHFSGIFLASSSFFLLALLLHALAGAYSRRGGKKGPSGFSPTAFRPFELYPAALLPAFLAGLVWAVAMVAWFVANQRLTSLAVTFPIITATPGLVASLWGVVVFGEIRGRRNLGVLAAAFGLTATSCGLIAASR 158
MDRAAEPDSSFARYQDLQMLDFVFAHFSGIFLASSSFFLLALLLHALAGAYSRRGGKKGPSGFSPTAFRPFELYPAALLPAFLAGLVWAVAMVAWFVANQRLTSLAVTFPIITATPGLVASLWGVVVFGEIRGRRNLGVLAAAFGLTATSCGLIAASR
Sbjct: 1 MDRAAEPDSSFARYQDLQMLDFVFAHFSGIFLASSSFFLLALLLHALAGAYSRRGGKKGPSGFSPTAFRPFELYPAALLPAFLAGLVWAVAMVAWFVANQRLTSLAVTFPIITATPGLVASLWGVVVFGEIRGRRNLGVLAAAFGLTATSCGLIAASR 158
BLAST of EWM30412.1 vs. NCBI_GenBank
Match: gi|696974099|ref|XP_009556754.1| (PREDICTED: transmembrane protein 144-like [Cuculus canorus]) HSP 1 Score: 109.768 bits (273), Expect = 7.566e-27 Identity = 57/127 (44.88%), Postives = 82/127 (64.57%), Query Frame = 0
Query: 20 LDFVFAHFSGIFLASSSFFLLALLLHALAGAYSRRGGKKGPSGFSPTAFRPFELYPAALLPAFLAGLVWAVAMVAWFVANQRLTSLAVTFPIITATPGLVASLWGVVVFGEIRGRRNLGVLAAAFGL 146
LD+VFAHFSGIFL S+ +FL+ + K P+ +YP A+LP F++G++WA+A WF+AN L+++ V+FPIITA PGLVA++WGV+VF EI+G RN +L+ AF +
Sbjct: 112 LDYVFAHFSGIFLTSTVYFLIYCAVR-----------KNKPN-----------VYPQAILPGFVSGVLWAIANCCWFIANHYLSAV-VSFPIITAGPGLVAAMWGVLVFKEIKGLRNYALLSVAFCI 215
BLAST of EWM30412.1 vs. NCBI_GenBank
Match: gi|1101612578|ref|XP_018970691.1| (PREDICTED: transmembrane protein 144-like [Cyprinus carpio]) HSP 1 Score: 112.849 bits (281), Expect = 8.569e-27 Identity = 65/157 (41.40%), Postives = 94/157 (59.87%), Query Frame = 0
Query: 2 DRAAEPDSSFARYQDLQMLDFVFAHFSGIFLASSSFFLLALLLHALAGAYSRRGGKKGPSGFSPTAFRPFELYPAALLPAFLAGLVWAVAMVAWFVANQRLTSLAVTFPIITATPGLVASLWGVVVFGEIRGRRNLGVLAAAFGLTATSCGLIAASR 158
+ A++PDS ++ LD+VFA +SGIFL S+ +F+L + KK RP +++P A+LP FL+G++W VA WF+AN L+++ V+FPIIT PGL+A+LWGVVVF E++G RN VL AF L + L A S+
Sbjct: 258 NHASDPDSQYSGASQFD-LDYVFAQYSGIFLTSTVYFILYCAI------------KKN---------RP-QVFPKAVLPGFLSGIMWGVATCCWFLANHYLSAV-VSFPIITTVPGLIAALWGVVVFKEVKGWRNYIVLVVAFCLVLSGALLTAFSK 390
BLAST of EWM30412.1 vs. NCBI_GenBank
Match: gi|1020491998|ref|XP_016084431.1| (PREDICTED: transmembrane protein 144-like [Sinocyclocheilus grahami]) HSP 1 Score: 112.849 bits (281), Expect = 1.119e-26 Identity = 64/157 (40.76%), Postives = 94/157 (59.87%), Query Frame = 0
Query: 2 DRAAEPDSSFARYQDLQMLDFVFAHFSGIFLASSSFFLLALLLHALAGAYSRRGGKKGPSGFSPTAFRPFELYPAALLPAFLAGLVWAVAMVAWFVANQRLTSLAVTFPIITATPGLVASLWGVVVFGEIRGRRNLGVLAAAFGLTATSCGLIAASR 158
+ A++PDS ++ LD+VFA +SGIFL S+ +F+L + KK RP +++P A+LP FL+G++W +A WF+AN L+++ V+FPIIT PGL+A+LWGVVVF E++G RN VL AF L + L A S+
Sbjct: 257 NHASDPDSQYSGASQFD-LDYVFAQYSGIFLTSTVYFILYCAI------------KKN---------RP-QVFPKAVLPGFLSGIMWGIATCCWFLANHYLSAV-VSFPIITTVPGLIAALWGVVVFKEVKGWRNYIVLVVAFCLVLSGALLTAFSK 389
BLAST of EWM30412.1 vs. NCBI_GenBank
Match: gi|1025130022|ref|XP_016414386.1| (PREDICTED: transmembrane protein 144-like [Sinocyclocheilus rhinocerous]) HSP 1 Score: 112.464 bits (280), Expect = 1.154e-26 Identity = 64/157 (40.76%), Postives = 94/157 (59.87%), Query Frame = 0
Query: 2 DRAAEPDSSFARYQDLQMLDFVFAHFSGIFLASSSFFLLALLLHALAGAYSRRGGKKGPSGFSPTAFRPFELYPAALLPAFLAGLVWAVAMVAWFVANQRLTSLAVTFPIITATPGLVASLWGVVVFGEIRGRRNLGVLAAAFGLTATSCGLIAASR 158
+ A++PDS ++ LD+VFA +SGIFL S+ +F+L + KK RP +++P A+LP FL+G++W +A WF+AN L+++ V+FPIIT PGL+A+LWGVVVF E++G RN VL AF L + L A S+
Sbjct: 257 NHASDPDSQYSGASQFD-LDYVFAQYSGIFLTSTVYFILYCAI------------KKN---------RP-QVFPKAVLPGFLSGIMWGIATCCWFLANHYLSAV-VSFPIITTVPGLIAALWGVVVFKEVKGWRNYIVLVVAFCLVLSGALLTAFSK 389
BLAST of EWM30412.1 vs. NCBI_GenBank
Match: gi|1024929438|ref|XP_016300312.1| (PREDICTED: transmembrane protein 144-like [Sinocyclocheilus anshuiensis]) HSP 1 Score: 112.464 bits (280), Expect = 1.324e-26 Identity = 64/157 (40.76%), Postives = 94/157 (59.87%), Query Frame = 0
Query: 2 DRAAEPDSSFARYQDLQMLDFVFAHFSGIFLASSSFFLLALLLHALAGAYSRRGGKKGPSGFSPTAFRPFELYPAALLPAFLAGLVWAVAMVAWFVANQRLTSLAVTFPIITATPGLVASLWGVVVFGEIRGRRNLGVLAAAFGLTATSCGLIAASR 158
+ A++PDS ++ LD+VFA +SGIFL S+ +F+L + KK RP +++P A+LP FL+G++W +A WF+AN L+++ V+FPIIT PGL+A+LWGVVVF E++G RN VL AF L + L A S+
Sbjct: 258 NHASDPDSQYSGASQFD-LDYVFAQYSGIFLTSTMYFILYCAI------------KKN---------RP-QVFPKAVLPGFLSGIMWGIATCCWFLANHYLSAV-VSFPIITTVPGLIAALWGVVVFKEVKGWRNYIVLVVAFCLVLSGALLTAFSK 390
BLAST of EWM30412.1 vs. NCBI_GenBank
Match: gi|1121963217|ref|XP_019469975.1| (PREDICTED: transmembrane protein 144 isoform X2 [Meleagris gallopavo]) HSP 1 Score: 111.694 bits (278), Expect = 2.471e-26 Identity = 60/145 (41.38%), Postives = 89/145 (61.38%), Query Frame = 0
Query: 2 DRAAEPDSSFARYQDLQMLDFVFAHFSGIFLASSSFFLLALLLHALAGAYSRRGGKKGPSGFSPTAFRPFELYPAALLPAFLAGLVWAVAMVAWFVANQRLTSLAVTFPIITATPGLVASLWGVVVFGEIRGRRNLGVLAAAFGL 146
D ++++AR LD+VFAHFSGIFL S+ +FL+ + K P+ +YP A+LP F++GL+WAVA WF+AN L+++ V+FPIITA PGL+A++WGV+VF EI+G +N +L+ AF +
Sbjct: 255 DHGRRNETTYARASQFD-LDYVFAHFSGIFLTSTIYFLIYCAVR-----------KNKPN-----------VYPQAILPGFVSGLLWAVANCCWFIANHYLSAV-VSFPIITAGPGLIAAMWGVLVFKEIKGLKNYVLLSVAFCI 375
BLAST of EWM30412.1 vs. NCBI_GenBank
Match: gi|733884098|ref|XP_010707740.1| (PREDICTED: transmembrane protein 144 isoform X1 [Meleagris gallopavo]) HSP 1 Score: 111.694 bits (278), Expect = 2.616e-26 Identity = 60/145 (41.38%), Postives = 89/145 (61.38%), Query Frame = 0
Query: 2 DRAAEPDSSFARYQDLQMLDFVFAHFSGIFLASSSFFLLALLLHALAGAYSRRGGKKGPSGFSPTAFRPFELYPAALLPAFLAGLVWAVAMVAWFVANQRLTSLAVTFPIITATPGLVASLWGVVVFGEIRGRRNLGVLAAAFGL 146
D ++++AR LD+VFAHFSGIFL S+ +FL+ + K P+ +YP A+LP F++GL+WAVA WF+AN L+++ V+FPIITA PGL+A++WGV+VF EI+G +N +L+ AF +
Sbjct: 257 DHGRRNETTYARASQFD-LDYVFAHFSGIFLTSTIYFLIYCAVR-----------KNKPN-----------VYPQAILPGFVSGLLWAVANCCWFIANHYLSAV-VSFPIITAGPGLIAAMWGVLVFKEIKGLKNYVLLSVAFCI 377
BLAST of EWM30412.1 vs. NCBI_GenBank
Match: gi|326918275|ref|XP_003205415.1| (PREDICTED: transmembrane protein 144 isoform X4 [Meleagris gallopavo] >gi|1121963220|ref|XP_019469976.1| PREDICTED: transmembrane protein 144 isoform X4 [Meleagris gallopavo]) HSP 1 Score: 110.923 bits (276), Expect = 2.774e-26 Identity = 60/145 (41.38%), Postives = 89/145 (61.38%), Query Frame = 0
Query: 2 DRAAEPDSSFARYQDLQMLDFVFAHFSGIFLASSSFFLLALLLHALAGAYSRRGGKKGPSGFSPTAFRPFELYPAALLPAFLAGLVWAVAMVAWFVANQRLTSLAVTFPIITATPGLVASLWGVVVFGEIRGRRNLGVLAAAFGL 146
D ++++AR LD+VFAHFSGIFL S+ +FL+ + K P+ +YP A+LP F++GL+WAVA WF+AN L+++ V+FPIITA PGL+A++WGV+VF EI+G +N +L+ AF +
Sbjct: 224 DHGRRNETTYARASQFD-LDYVFAHFSGIFLTSTIYFLIYCAVR-----------KNKPN-----------VYPQAILPGFVSGLLWAVANCCWFIANHYLSAV-VSFPIITAGPGLIAAMWGVLVFKEIKGLKNYVLLSVAFCI 344
BLAST of EWM30412.1 vs. NCBI_GenBank
Match: gi|966652525|gb|KTF87427.1| (hypothetical protein cypCar_00019904 [Cyprinus carpio]) HSP 1 Score: 111.309 bits (277), Expect = 3.652e-26 Identity = 63/157 (40.13%), Postives = 92/157 (58.60%), Query Frame = 0
Query: 2 DRAAEPDSSFARYQDLQMLDFVFAHFSGIFLASSSFFLLALLLHALAGAYSRRGGKKGPSGFSPTAFRPFELYPAALLPAFLAGLVWAVAMVAWFVANQRLTSLAVTFPIITATPGLVASLWGVVVFGEIRGRRNLGVLAAAFGLTATSCGLIAASR 158
+ A++PDS ++ LD+VFA +SGIFL S+ +F+L + K P +++P A+LP FL+G++W VA WF+AN L+++ V+FPIIT PGL+A+LWGVVVF E++G RN VL AF L + L A S+
Sbjct: 258 NHASDPDSQYSGASQFD-LDYVFAQYSGIFLTSTVYFVLYCAIK-----------KNKP-----------QVFPKAVLPGFLSGIMWGVATCCWFLANNYLSAV-VSFPIITTVPGLIAALWGVVVFKEVKGWRNYIVLIVAFCLVLSGALLTAFSK 390 The following BLAST results are available for this feature:
BLAST of EWM30412.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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