EWM27871.1, cds2797 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27871.1 vs. NCBI_GenBank
Match: gi|585110201|gb|EWM27871.1| (Protein of unknown function DUF2870 [Nannochloropsis gaditana]) HSP 1 Score: 650.203 bits (1676), Expect = 0.000e+0 Identity = 316/316 (100.00%), Postives = 316/316 (100.00%), Query Frame = 0 Query: 1 MVVLHVKRSDGDEFLYETTCETKNEDLIQDLVWVWNARLLLQRLVNMVQSIPQEPDELGVRSNSSEDITPRKDVLVRVAFDAEAYLGSNSTSQEEKKTGDDGTLQVNKPKKPQHAMSRTLLQEQLDNFHGAIESASPSVSSPLATSFNQNVKQSDGTKDVVLAEMSRVIRSGRSPTLLQALSSCEANKANSANNPEQDGSLSGLDPTTARLWAMGKKFVREKTVGEQLGGCRNEKTKIVVKLAGPGQGPPVREPVVREEERLAMLAHYFKRQEELKRLAEAEDDEYLHAEWADGKQLQRGLRGVGDVGAPGIGGVR 316 MVVLHVKRSDGDEFLYETTCETKNEDLIQDLVWVWNARLLLQRLVNMVQSIPQEPDELGVRSNSSEDITPRKDVLVRVAFDAEAYLGSNSTSQEEKKTGDDGTLQVNKPKKPQHAMSRTLLQEQLDNFHGAIESASPSVSSPLATSFNQNVKQSDGTKDVVLAEMSRVIRSGRSPTLLQALSSCEANKANSANNPEQDGSLSGLDPTTARLWAMGKKFVREKTVGEQLGGCRNEKTKIVVKLAGPGQGPPVREPVVREEERLAMLAHYFKRQEELKRLAEAEDDEYLHAEWADGKQLQRGLRGVGDVGAPGIGGVR Sbjct: 1 MVVLHVKRSDGDEFLYETTCETKNEDLIQDLVWVWNARLLLQRLVNMVQSIPQEPDELGVRSNSSEDITPRKDVLVRVAFDAEAYLGSNSTSQEEKKTGDDGTLQVNKPKKPQHAMSRTLLQEQLDNFHGAIESASPSVSSPLATSFNQNVKQSDGTKDVVLAEMSRVIRSGRSPTLLQALSSCEANKANSANNPEQDGSLSGLDPTTARLWAMGKKFVREKTVGEQLGGCRNEKTKIVVKLAGPGQGPPVREPVVREEERLAMLAHYFKRQEELKRLAEAEDDEYLHAEWADGKQLQRGLRGVGDVGAPGIGGVR 316
BLAST of EWM27871.1 vs. NCBI_GenBank
Match: gi|698788526|ref|XP_009827295.1| (hypothetical protein H257_04466 [Aphanomyces astaci] >gi|574118384|gb|ETV83865.1| hypothetical protein H257_04466 [Aphanomyces astaci]) HSP 1 Score: 166.007 bits (419), Expect = 6.319e-46 Identity = 118/320 (36.88%), Postives = 168/320 (52.50%), Query Frame = 0 Query: 1 MVVLHVKRSDGDEFLYETTCETKNEDLIQDLVWVWNARLLLQRLVNMVQSIPQE-----PDELGVRSNSSEDITPRKDVLVRVAFDAEAYLGS---NSTSQEEKKTGDDGTLQVNKPKKPQH--AMSRTLLQEQLDNFHGAIESASPSVSSPLATSFNQNVKQSDGTKDVVLAEMSRVIRSGRSPTLLQALSSCEANKANSANNPEQDGSLSGLD---PTTARLWAMGKKFVREKTVGEQLGGCRNEKTKIVVKLAGPGQGPPVREPVVREEERLAMLAHYFKRQEELKRLAEAEDDEYLHAEWADGKQLQRGLRGVGDV 307 MVV++VK S+ + FL+ETTC T N+ L+++LV V NAR+ L L + QS+ Q P E G+ S +S TP + + F E LG N ++T VN+ K A+S+ +LQE+LDNF G + P + P DVV +++ GR L G+ SG+D TA LW GK+F R++TVG+++G +NEKTK++ KL G P REP V E+ER AM+AHYFK+QEELK+LA+ +DD YLH+ WA+ QL+ LRG ++ Sbjct: 1 MVVINVKLSETEAFLFETTCSTSNDTLVRELVHVHNARVRLASLASHTQSLFQHGVAKHPQEHGLDSYAS---TP----IQKAEFYEEDPLGQRTGNGVCASLRETLTRMVADVNQYLKSNGRVAISQNVLQEKLDNFRGLVMMGFP-MGLP--------------EYDVV-----QLLLDGRDEEAL-------------------GGTQSGMDILNADTAELWWAGKQFFRDETVGDRVG--KNEKTKVIAKLTKKANGAPQREPAVSEDERKAMMAHYFKKQEELKKLADEDDDAYLHSSWANPSQLKNSLRGTNNI 272
BLAST of EWM27871.1 vs. NCBI_GenBank
Match: gi|299470788|emb|CBN79834.1| (Putative: flagellar basal body protein [Chlamydomonas reinhardtii] [Ectocarpus siliculosus]) HSP 1 Score: 164.466 bits (415), Expect = 2.427e-45 Identity = 121/343 (35.28%), Postives = 163/343 (47.52%), Query Frame = 0 Query: 1 MVVLHVKRSDGDEFLYETTCETKNEDLIQDLVWVWNARLLLQRLVNMVQSI--------PQE----------------------PDELGVRSNSSEDITPR-KDVLVRVAFDAEAYLGSNSTSQEEKKTGDDGTLQVNKPKKPQHAMSRTLLQEQLDNFHGAIESASPSVSSPLATSFNQNVKQSDGTKDVVLAEMSRVIRSGRSPTLLQALSSCEANKANSANNPEQDGSLSGLDPTTARLWAMGKKFVREKTVGEQLGGCRNEKTKIVVKLAGPGQGPPVREPVVREEERLAMLAHYFKRQEELKRLAEAEDDEYLHAEWADGKQLQRGLRGVGDVGAPGI 312 MVV+ VKRSD D FL E+T N+ L++ LV +WN RL L +LV + + P E PD G R+ + + P+ + L V DAEA LG + + A+++ L E++DN GA+ A P + P ++ +G E +A + LD TA LW GK+F R++ VG+++G +NEKT+I+ KL PG GPP REP V E+ER AM+A YFKRQEELKRLAEA DD+YL + WAD KQLQR LRG G V APG+ Sbjct: 1 MVVVQVKRSDTDVFLVESTITESNDALVRRLVKIWNTRLRLMQLVESARDMGKYGPSKPPAEHGLDEVKEEYEGASIDKGPYYHPDPTGKRTGNG--VGPQLCETLEGVCVDAEALLGKEQAQR-------------------RVAVTQEALDEKMDNIRGAVTMAFP-MGLPEFDPVRLTIEGGEG---------------------------LEGTQAGTEI----------LDEETAGLWMAGKEFRRDQLVGDRVG--KNEKTRIMCKLQKPGSGPPGREPGVSEDERKAMMAFYFKRQEELKRLAEANDDDYLASAWADPKQLQRSLRGTGTVRAPGV 282
BLAST of EWM27871.1 vs. NCBI_GenBank
Match: gi|673046999|ref|XP_008877460.1| (hypothetical protein H310_12244 [Aphanomyces invadans] >gi|574466874|gb|ETV93900.1| hypothetical protein H310_12244 [Aphanomyces invadans]) HSP 1 Score: 164.081 bits (414), Expect = 3.653e-45 Identity = 119/320 (37.19%), Postives = 168/320 (52.50%), Query Frame = 0 Query: 1 MVVLHVKRSDGDEFLYETTCETKNEDLIQDLVWVWNARLLLQRLVNMVQSIPQE-----PDELGVRSNSSEDITPRKDVLVRVAFDAEAYLGS---NSTSQEEKKTGDDGTLQVNKPKKPQH--AMSRTLLQEQLDNFHGAIESASPSVSSPLATSFNQNVKQSDGTKDVVLAEMSRVIRSGRSPTLLQALSSCEANKANSANNPEQDGSLSGLD---PTTARLWAMGKKFVREKTVGEQLGGCRNEKTKIVVKLAGPGQGPPVREPVVREEERLAMLAHYFKRQEELKRLAEAEDDEYLHAEWADGKQLQRGLRGVGDV 307 MVV++VK S+ + FL+ETTC T N+ +I++LV V NAR+ L LV QS+ Q P E G+ S +S TP + + F E LG N ++T VN+ K A+S+ +LQE+LDNF G + P + P DVV +++ G+ L G+ SG+D TA LW GK+F R++TVG+++G +NEKTK++ KL G P REP V EEER AM+AHYFK+QEELK+LA+ +DD YLH+ WA+ QL+ LRG ++ Sbjct: 1 MVVINVKLSETEGFLFETTCNTPNDTVIRELVHVHNARVRLANLVTHTQSLFQHGVAKHPQEHGLDSYAS---TP----VHKAEFYEEDPLGQRTGNGVCPALRETLTRMVADVNQYLKSNARVAISQNVLQEKLDNFRGLVMMGFP-MGLP--------------EYDVV-----QLLLDGKDEDAL-------------------GGTQSGMDILSADTAELWWAGKQFFRDETVGDRVG--KNEKTKVIAKLTKKANGAPQREPAVSEEERKAMMAHYFKKQEELKKLADEDDDAYLHSSWANPSQLKNSLRGTTNI 272
BLAST of EWM27871.1 vs. NCBI_GenBank
Match: gi|1173954879|gb|OQS02013.1| (hypothetical protein THRCLA_05579 [Thraustotheca clavata]) HSP 1 Score: 153.295 bits (386), Expect = 5.043e-41 Identity = 109/332 (32.83%), Postives = 160/332 (48.19%), Query Frame = 0 Query: 1 MVVLHVKRSDGDEFLYETTCETKNEDLIQDLVWVWNARLLLQRLVNMVQSIPQ-----EPDELGVRSNSSEDITPR--------------------KDVLVRVAFDAEAYLGSNSTSQEEKKTGDDGTLQVNKPKKPQHAMSRTLLQEQLDNFHGAIESASPSVSSPLATSFNQNVKQSDGTKDVVLAEMSRVIRSGRSPTLLQALSSCEANKANSANNPEQDGSLSGLDPTTARLWAMGKKFVREKTVGEQLGGCRNEKTKIVVKLAGPGQGPPVREPVVREEERLAMLAHYFKRQEELKRLAEAEDDEYLHAEWADGKQLQRGLRGVGDV 307 MVV+ +K + D FLYET+C+T N+ L+++LV V NAR+ L L + + Q P G+ S ++E + +D L R+ D + YL SN LQ + +LQE+LDNF G + P + P D+V +++ G L L + S +DP TA LW GK+F RE+TVG+++G +NEKTK++ +LA G P REP V E+ER AM+AHYFK+QEELK+LAE ++D+YLH+ WA+ L+ LRG ++ Sbjct: 1 MVVIQIKLGENDGFLYETSCKTSNDTLVRELVKVHNARIRLASLNSYTPGLFQYGFAKHPQNQGIDSYATEPVRKEEFYEEDPLGQRTGNGVCQSLRDTLQRMTEDVKVYLRSN-------------LLQ---------PVDTRVLQEKLDNFKGIVMMGFP-MGLP--------------EYDIV-----KMLLDGNDEDALAGLQA----------------SQELMDPETAELWWAGKQFFREETVGDRVG--KNEKTKVIARLARKSGGAPQREPAVSEDERKAMMAHYFKKQEELKKLAEEDEDDYLHSSWANPSALKNQLRGTNNI 272
BLAST of EWM27871.1 vs. NCBI_GenBank
Match: gi|1173950972|gb|OQR98902.1| (hypothetical protein ACHHYP_07617 [Achlya hypogyna]) HSP 1 Score: 147.517 bits (371), Expect = 7.253e-39 Identity = 100/332 (30.12%), Postives = 157/332 (47.29%), Query Frame = 0 Query: 1 MVVLHVKRSDGDEFLYETTCETKNEDLIQDLVWVWNARLLLQRLVNMV-----QSIPQEPDELGVRSNSSEDITPR--------------------KDVLVRVAFDAEAYLGSNSTSQEEKKTGDDGTLQVNKPKKPQHAMSRTLLQEQLDNFHGAIESASPSVSSPLATSFNQNVKQSDGTKDVVLAEMSRVIRSGRSPTLLQALSSCEANKANSANNPEQDGSLSGLDPTTARLWAMGKKFVREKTVGEQLGGCRNEKTKIVVKLAGPGQGPPVREPVVREEERLAMLAHYFKRQEELKRLAEAEDDEYLHAEWADGKQLQRGLRGVGDV 307 MVV+ +K + D FL+ETTC T N+ L++ + V NAR+ L L + V + + P G+ + +SE + ++ L R+ D AYL S++ ++P ++ LQE+LDNF G + F + + D + +++ G L L + S +DP TA LW GK+F R+ TVG+++G +NEKTK++ +L G P REP V E+ER AM+AHYFK+QEELK+LA+ ++D+YLH+ WA+ L+ LRG ++ Sbjct: 1 MVVISIKLGEADGFLFETTCATSNDALVRGIAAVHNARIRLASLNSYVPGLFQHGVAKHPQNQGIDTYASEPVHKEEFYEEDPLGQRTGNGVCPSLRETLARMTADVTAYLKSHA-------------------REP---VTMAGLQEKLDNFRGIV-----------MMGFPMGLPEYD---------IVKMLLDGHDEDALAGLQA----------------SQDLMDPATAELWWAGKQFFRDDTVGDRVG--KNEKTKVIARLTKKSAGAPQREPAVSEDERKAMMAHYFKKQEELKKLADEDEDDYLHSSWANPSALKNQLRGTNNL 272
BLAST of EWM27871.1 vs. NCBI_GenBank
Match: gi|669168787|ref|XP_008619742.1| (hypothetical protein SDRG_15351 [Saprolegnia diclina VS20] >gi|530728598|gb|EQC26840.1| hypothetical protein SDRG_15351 [Saprolegnia diclina VS20]) HSP 1 Score: 147.517 bits (371), Expect = 7.488e-39 Identity = 104/332 (31.33%), Postives = 154/332 (46.39%), Query Frame = 0 Query: 1 MVVLHVKRSDGDEFLYETTCETKNEDLIQDLVWVWNARLLLQRLVNMV-----QSIPQEPDELGVRSNSSEDITPR--------------------KDVLVRVAFDAEAYLGSNSTSQEEKKTGDDGTLQVNKPKKPQHAMSRTLLQEQLDNFHGAIESASPSVSSPLATSFNQNVKQSDGTKDVVLAEMSRVIRSGRSPTLLQALSSCEANKANSANNPEQDGSLSGLDPTTARLWAMGKKFVREKTVGEQLGGCRNEKTKIVVKLAGPGQGPPVREPVVREEERLAMLAHYFKRQEELKRLAEAEDDEYLHAEWADGKQLQRGLRGVGDV 307 MVV+ +K + D FLYE TC T N+ L++DLV V NAR+ L L V + + P G+ S +++ + ++ L R+ D +AYL SN + + LQE+LDNF G + P G + + +M + G L L + S +DP TA LW GK+F R+ TVG+++G +NEKTK++ +LA G P REP V E+ER AM+AHYFK+QEELK+LA+ ++D+YLH+ WA+ L+ LRG ++ Sbjct: 1 MVVVQIKLGEQDGFLYEATCATPNDHLVRDLVHVHNARIRLASLNAYVPGLFTHGVAKHPQNQGIDSYATDQVRKEEFYEEDPLGQRTGNGVCPSLRETLGRMVEDVKAYLKSNM----------------------REPVLLPALQEKLDNFRGIVMMGFPM-----------------GLPEYDIVQM---LLDGNDEEALAGLQA----------------SQDLMDPATAELWWAGKQFFRDDTVGDRVG--KNEKTKVIARLARKSGGAPQREPAVSEDERKAMMAHYFKKQEELKKLADEDEDDYLHSSWANPSALKNQLRGTNNL 272
BLAST of EWM27871.1 vs. NCBI_GenBank
Match: gi|325187950|emb|CCA22494.1| (conserved hypothetical protein [Albugo laibachii Nc14]) HSP 1 Score: 136.732 bits (343), Expect = 1.311e-34 Identity = 105/336 (31.25%), Postives = 160/336 (47.62%), Query Frame = 0 Query: 1 MVVLHVKRSDGDEFLYETTCETKNEDLIQDLVWVWNARLLLQRLVNMVQSIPQ----------------------------EPDELGVRSNSSEDITPR-KDVLVRVAFDAEAYLGSNSTSQEEKKTGDDGTLQVNKPKKPQHAMSRTLLQEQLDNFHGAIESASPSVSSPLATSFNQNVKQSDGTKDVVLAEMSRVIRSGRSPTLLQALSSCEANKANSANNPEQDGSLSGLDPTTARLWAMGKKFVREKTVGEQLGGCRNEKTKIVVKLAGPGQGPPVREPVVREEERLAMLAHYFKRQEELKRLAEAEDDEYLHAEWADGKQLQRGLRGVGDV 307 MV+ HVKR D +EFL+E T +T+NEDLI +L ++ N R+ L L + + + + E D LG+R+ E ++P+ ++ + +V+ DA+ +L S Q +K T +R L+E+L N GA+ A P + D K+++ E + E A+ A SL + LW GK+F R++TV + +G NEKTKI+VKL G G P REP V EEE+ AM+A YFK+QEE+K+LAE + ++Y+ + WAD K L+ LRG + Sbjct: 1 MVLFHVKRGDKNEFLHEATVDTRNEDLICELCYLNNTRIRLSALADALPDLGRFGMALKPNEQGLDTFQEVNETKERGQFYEDDPLGLRT--GEGVSPQLRETMAKVSEDAKQFLNSKQQIQMKKCT------------------TRHELEEKLMNIRGAVMMAFP-----------MGLPAHDPIKNLLDRE------------------NVEEALADRA------ASLDVTNIENTELWWAGKQFYRDQTVRDMVGS--NEKTKIIVKLQKKGGGMPSREPGVTEEEQKAMMAFYFKKQEEMKKLAEDDAEDYMASSWADPKALKNSLRGTATI 279
BLAST of EWM27871.1 vs. NCBI_GenBank
Match: gi|224002565|ref|XP_002290954.1| (hypothetical protein THAPSDRAFT_262729 [Thalassiosira pseudonana CCMP1335] >gi|220972730|gb|EED91061.1| hypothetical protein THAPSDRAFT_262729, partial [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 138.272 bits (347), Expect = 1.803e-34 Identity = 109/341 (31.96%), Postives = 159/341 (46.63%), Query Frame = 0 Query: 1 MVVLHVKRS-----DGDEFLYETTCETKNEDLIQDLVWVWNARLLLQRLVNMVQSIP------------------------QEPDELGVRSNSSEDITPRKDVLVRVAFDAEAYLGSNSTSQEEKKTGDDGTLQVNKPKKPQHAMSRTLLQEQLDNFHGAIESASPSVSSPLATSFNQNVKQSDGTKDVVLAEMSRVIRSGRSPTLLQALSSCEANKANSANNPEQDGSLSGLDPTTARLWAMGKKFVREKTVGEQLGGCRNEKTKIVVKLAGPGQGPPVREPVVREEERLAMLAHYFKRQEELKRLAEAEDDEYLHAEWADGKQLQRGLRGVGDVGAPGI 312 MV++ +K + D FL+ETT T +LI LV + NARL +V+ V+++ PD G+R+ + D ++L R E Y+ S Q ++K L ++K ++E L+N GA+ A P +G + LA ++ + + GSL +D A LW K+F+R K V ++LG C NEKTKIV KL G GPP REP+V E ER AM A YFKRQEELK+L++A++D+YL++EWAD K ++R L+G+ DV APG Sbjct: 81 MVLISLKSTLPNTTTNDGFLFETTSSTPVTELIDSLVDIHNARLRCCLVVDAVRALATYGVMKKLEEAGTDEVREVEKGTNYTPDPSGLRTGNPPD-EKMVEILNREVLALEEYV---SKDQVQRKV----VLTIHK------------IEESLNNVRGAVTMAYP-----------------EGLPEWDLARIAL------------------EDPIDKLKGTYLGGSL--IDANDASLWTCNKEFIRGKLVSDRLGSC-NEKTKIVAKLTTKGSGPPAREPIVSEAERNAMTAFYFKRQEELKKLSQADEDDYLNSEWADPKGMKRNLQGLNDVKAPGF 363
BLAST of EWM27871.1 vs. NCBI_GenBank
Match: gi|668455231|gb|KFB43540.1| (AGAP002817-PA-like protein [Anopheles sinensis]) HSP 1 Score: 131.724 bits (330), Expect = 1.422e-32 Identity = 99/312 (31.73%), Postives = 154/312 (49.36%), Query Frame = 0 Query: 1 MVVLHVKRSDGDEFLYETTCETKNEDLIQDLVWVWNARLLLQRLVNMVQSIPQE-----PDELGVRSNSSEDITPRKDVLVRVAFDAEAYLGSNSTSQEEKKTGDDGTLQVNKPKKPQHAMSRTLLQEQLDNFHGAIESASPSVSSPLATSFNQNVKQSDGTKDVVLAEMSRVIRSGRSPTLLQALSSCEANKANSANNPEQDGSLSGLDPTTARLWAMGKKFVREKTVGEQLGGCRNEKTKIVVKLAGPGQGPPVREPVVREEERLAMLAHYFKRQEELKRLAEAEDDEYLHAEWADGKQLQRGLRGVGDV 307 MV+LHVKR + +FLYETT + E L +LV ++N RL + R+ + ++ + + PD LG+ E+ L V A+ + S G Q PQ M L Q A+E A +S L N+ + Q + + + L + I P L +N+ + SL ++P+ A+LW GK + +K +GE +G +NEKTK++VKLA +G P REPV+ EE R M+ H ++RQEELK+L + +DD+YL + W+D + L+R + G+ DV Sbjct: 1 MVLLHVKRGEESQFLYETTTAVRVEQLAYELVTIYNGRLKVSRVCSEIEELAKHGTMLPPDMLGLTDEQVEE-------LHLVDEWADTCIPSGGWRFNRDPVGRRNGHQ------PQPKMGEILTQ--------AVEDAKTMISKKLVNE-NKLLSQRNVQEALDLLRGAVTIVY---PMQLPPHDPIRMEFSNTEDLTGTQASLEVIEPSKAQLWFAGKLMLNDKLLGEIVG--QNEKTKLIVKLAKLNEGAPGREPVITEEARKQMMMHAYRRQEELKKLEQDDDDQYLDSAWSDSRSLKRQVHGLEDV 285 The following BLAST results are available for this feature:
BLAST of EWM27871.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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