EWM27881.1, cds2792 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27881.1 vs. NCBI_GenBank
Match: gi|585110212|gb|EWM27881.1| (hypothetical protein Naga_100323g2 [Nannochloropsis gaditana]) HSP 1 Score: 923.309 bits (2385), Expect = 0.000e+0 Identity = 443/443 (100.00%), Postives = 443/443 (100.00%), Query Frame = 0
Query: 1 MNTGYRQLSLQFPFHLIVCQRNNSGSLLHWLRPLFPFRVMGRLYVLIAGSFLAGFLVACTSSTPTSPPPHRLRRALEAFSLIPDAKVRMGELEAPFAAKEHDVGSEGEIKNTVNEHYNPAGGRGAAASQTTEEVYKVTTENSEPTIEHVRLVPRYITLAEESERPARVVLPDNYPADQSEDGSEDQAGAKLWPLIMMLHGYGSDASYHDHFLGLSARINQHGGFLALLPNGTVNSEGKHFWNGIRCCDFDHQGPDDVTYLTSLVKEAIRTLDVDPRRVYMLGHSNGGAMTQILACEHGELFAAIASVTPGEIPSVCAPSHPISVLEVCASEDVIVKAELCASVVGNWTTVDRCPAAPHLETSRDYDCDPSRPFDDNEGYDQWRDHNCKLEGRETEVTGWVCKGGSQVEFWWMRGAAHNPALSPQWSDDVVAWLLSKDYVAADS 443
MNTGYRQLSLQFPFHLIVCQRNNSGSLLHWLRPLFPFRVMGRLYVLIAGSFLAGFLVACTSSTPTSPPPHRLRRALEAFSLIPDAKVRMGELEAPFAAKEHDVGSEGEIKNTVNEHYNPAGGRGAAASQTTEEVYKVTTENSEPTIEHVRLVPRYITLAEESERPARVVLPDNYPADQSEDGSEDQAGAKLWPLIMMLHGYGSDASYHDHFLGLSARINQHGGFLALLPNGTVNSEGKHFWNGIRCCDFDHQGPDDVTYLTSLVKEAIRTLDVDPRRVYMLGHSNGGAMTQILACEHGELFAAIASVTPGEIPSVCAPSHPISVLEVCASEDVIVKAELCASVVGNWTTVDRCPAAPHLETSRDYDCDPSRPFDDNEGYDQWRDHNCKLEGRETEVTGWVCKGGSQVEFWWMRGAAHNPALSPQWSDDVVAWLLSKDYVAADS
Sbjct: 1 MNTGYRQLSLQFPFHLIVCQRNNSGSLLHWLRPLFPFRVMGRLYVLIAGSFLAGFLVACTSSTPTSPPPHRLRRALEAFSLIPDAKVRMGELEAPFAAKEHDVGSEGEIKNTVNEHYNPAGGRGAAASQTTEEVYKVTTENSEPTIEHVRLVPRYITLAEESERPARVVLPDNYPADQSEDGSEDQAGAKLWPLIMMLHGYGSDASYHDHFLGLSARINQHGGFLALLPNGTVNSEGKHFWNGIRCCDFDHQGPDDVTYLTSLVKEAIRTLDVDPRRVYMLGHSNGGAMTQILACEHGELFAAIASVTPGEIPSVCAPSHPISVLEVCASEDVIVKAELCASVVGNWTTVDRCPAAPHLETSRDYDCDPSRPFDDNEGYDQWRDHNCKLEGRETEVTGWVCKGGSQVEFWWMRGAAHNPALSPQWSDDVVAWLLSKDYVAADS 443
BLAST of EWM27881.1 vs. NCBI_GenBank
Match: gi|1175601748|ref|WP_082131632.1| (hypothetical protein [Cellulomonas sp. FA1]) HSP 1 Score: 155.992 bits (393), Expect = 1.895e-40 Identity = 96/311 (30.87%), Postives = 144/311 (46.30%), Query Frame = 0
Query: 139 TENSEPTIEHVRLVPRYITLAEESERPARVVLPDNYPADQSEDGSEDQAGAKLWPLIMMLHGYGSDASYHDHFLGLSARINQHGGFLALLPNGTVNSEGKHFWNGI-RCCDFDHQGPDDVTYLTSLVKEAIRTLDVDPRRVYMLGHSNGGAMTQILACEHGELFAAIASVTPGE--IPSVCAPSHPISVLEVCASEDVIVKAELCA-----------SVVGNWTTVDRCPAAPHLETSRDYDCDPSRPFDDNEGYDQWRDHNCKLEGRETEVTGWVCKGGSQVEFWWMRGAAHNPALSPQWSDDVVAWLLS 435
++ + PT R+ P + +R + +P Y AD+ PL++ LHGY + +LGL + + G FL P G V+ GK +WN CC FD PDD ++T +++ VDP+RV+++GHSNG M +AC H +L AA SV PS CAP P+SVL+V A D +++ E + V +W +D C A+P L T+ D++ L G ET + W C G++V W + G AH P S ++ DV AW+L+
Sbjct: 27 SDAAAPTPTPTRVAPGSSGTVDLDDRSFTLDVPSGYDADEPA------------PLVVSLHGYSEVGASTATYLGLRDQSEEQG-FLLAYPEGLVDRAGKQYWNATPACCSFDGADPDDDGFVTRVIETVQAQYAVDPKRVFVIGHSNGAFMALRMACHHPDLIAAAVSVAGANDADPSACAPGRPVSVLQVQADTDEVIRYEGGSVGPGAPYPGAEQTVADWRAIDECDASPTLGTA---------------------DYDSTLAGPETVTSSWSCSHGTEVGLWTIVGGAHGPTWSDAFAPDVTAWMLA 303
BLAST of EWM27881.1 vs. NCBI_GenBank
Match: gi|1177650618|ref|WP_082740278.1| (hypothetical protein [Cellulomonas iranensis]) HSP 1 Score: 154.451 bits (389), Expect = 7.423e-40 Identity = 95/311 (30.55%), Postives = 145/311 (46.62%), Query Frame = 0
Query: 139 TENSEPTIEHVRLVPRYITLAEESERPARVVLPDNYPADQSEDGSEDQAGAKLWPLIMMLHGYGSDASYHDHFLGLSARINQHGGFLALLPNGTVNSEGKHFWNGI-RCCDFDHQGPDDVTYLTSLVKEAIRTLDVDPRRVYMLGHSNGGAMTQILACEHGELFAAIASVTPGE--IPSVCAPSHPISVLEVCASEDVIVKAELCA-----------SVVGNWTTVDRCPAAPHLETSRDYDCDPSRPFDDNEGYDQWRDHNCKLEGRETEVTGWVCKGGSQVEFWWMRGAAHNPALSPQWSDDVVAWLLS 435
++ + PT R+ P + +R + +P Y AD+ PL++ LHGY + +LGL + ++ G+L P G V+ GK +WN CC FD PDD ++T +++ VDP+RV+++GHSNG M +AC H +L AA SV PS CAP P+SVL+V A D +++ E + V +W +D C A+P L T+ D++ L G ET + W C G++V W + G AH P S ++ DV AW+L+
Sbjct: 27 SDAAAPTPTPTRVAPGSSGTVDLDDRTFTLDVPSGYDADEPA------------PLVVSLHGYSEVGASTATYLGLRDQ-SEEKGYLLAYPEGLVDRAGKQYWNATPACCSFDGADPDDDGFVTRVIETVQAQYAVDPKRVFVIGHSNGAFMALRMACHHPDLIAAAVSVAGANDADPSACAPGRPVSVLQVQADTDEVIRYEGGSVGPGAPYPGAEQTVADWRAIDECDASPTLGTA---------------------DYDSTLPGPETVTSSWSCSHGTEVGLWTIVGGAHGPTWSDAFAPDVTAWMLA 303
BLAST of EWM27881.1 vs. NCBI_GenBank
Match: gi|816960203|gb|AKF09709.1| (Putative LIPOPROTEIN LPQP [Sandaracinus amylolyticus]) HSP 1 Score: 149.828 bits (377), Expect = 3.147e-38 Identity = 97/278 (34.89%), Postives = 131/278 (47.12%), Query Frame = 0
Query: 162 SERPARVVLPDNYPADQSEDGSEDQAGAKLWPLIMMLHGYGSDASYHDHFLGLSARINQHGGFLALLPNGTVNSEGKHFWNGIR-CCDFDHQGPDDVTYLTSLVKEAIRTLDVDPRRVYMLGHSNGGAMTQILACEHGELFAAIASVTPGEI--PSVCAPSHPISVLEVCASEDVIVKAELCASVVGNWTTVDRCPAAPHLETSRDYDCDPSRPFDDNEGYDQWRDHNCKLEGRETEVTGWV--CKGGSQVEFWWMRGAAHNPALSPQWSDDVVAWLL 434
+ERPAR+V+PD + G PL+++LHGY + A D + + + + GF LLPNGT +S G FWN CCDFD G DDV YLTSL+ EA + VD RVY +GHSNG M+ +ACE + AAI + + + C P+HP+SVL V D V A T V+R + + +P D L+G ET V W C G E W + G +H P+ W + +V WLL
Sbjct: 42 AERPARLVVPDAHD------------GTTPLPLVVLLHGYSASAPLQDTYW-RATQAARSMGFYLLLPNGTTDSRGNRFWNATTACCDFDMTGVDDVAYLTSLLDEAESVVPVDTSRVYFIGHSNGSYMSFRMACELSDRVAAIGGLAGADFLNDTDCEPAHPVSVLHVHGDADETVSFTGTAYYPSARTAVERWAGRAGCDVAAVETLEP-------------IDLVTSLDGAETTVERWSTGCAEGHDAELWTIAGGSHVPSFQSTWMEKLVGWLL 293
BLAST of EWM27881.1 vs. NCBI_GenBank
Match: gi|921301527|ref|WP_053236735.1| (hypothetical protein [Sandaracinus amylolyticus]) HSP 1 Score: 149.828 bits (377), Expect = 3.928e-38 Identity = 97/278 (34.89%), Postives = 131/278 (47.12%), Query Frame = 0
Query: 162 SERPARVVLPDNYPADQSEDGSEDQAGAKLWPLIMMLHGYGSDASYHDHFLGLSARINQHGGFLALLPNGTVNSEGKHFWNGIR-CCDFDHQGPDDVTYLTSLVKEAIRTLDVDPRRVYMLGHSNGGAMTQILACEHGELFAAIASVTPGEI--PSVCAPSHPISVLEVCASEDVIVKAELCASVVGNWTTVDRCPAAPHLETSRDYDCDPSRPFDDNEGYDQWRDHNCKLEGRETEVTGWV--CKGGSQVEFWWMRGAAHNPALSPQWSDDVVAWLL 434
+ERPAR+V+PD + G PL+++LHGY + A D + + + + GF LLPNGT +S G FWN CCDFD G DDV YLTSL+ EA + VD RVY +GHSNG M+ +ACE + AAI + + + C P+HP+SVL V D V A T V+R + + +P D L+G ET V W C G E W + G +H P+ W + +V WLL
Sbjct: 51 AERPARLVVPDAHD------------GTTPLPLVVLLHGYSASAPLQDTYW-RATQAARSMGFYLLLPNGTTDSRGNRFWNATTACCDFDMTGVDDVAYLTSLLDEAESVVPVDTSRVYFIGHSNGSYMSFRMACELSDRVAAIGGLAGADFLNDTDCEPAHPVSVLHVHGDADETVSFTGTAYYPSARTAVERWAGRAGCDVAAVETLEP-------------IDLVTSLDGAETTVERWSTGCAEGHDAELWTIAGGSHVPSFQSTWMEKLVGWLL 302
BLAST of EWM27881.1 vs. NCBI_GenBank
Match: gi|1127355889|gb|APR77292.1| (Putative CONSERVED LIPOPROTEIN LPQP [Minicystis rosea]) HSP 1 Score: 146.362 bits (368), Expect = 2.531e-37 Identity = 91/263 (34.60%), Postives = 131/263 (49.81%), Query Frame = 0
Query: 193 PLIMMLHGYGSDASYHDHFLGLSARINQHGGFLALLPNGTVNSEGKHFWNGI-RCCDFDHQGPDDVTYLTSLVKEAIRTLDVDPRRVYMLGHSNGGAMTQILACEHGELFAAIASVTPGEI---PSVCAPSHPISVLEV--CASEDVIVKAELCAS------------VVGNWTTVDRCPAAPHLETSRDYDCDPSRPFDDNEGYDQWRDHNCKLEGRETEVTGWV--CKGGSQVEFWWMRGAAHNPALSPQWSDDVVAWLLS 435
PL+++LHGYG D ++GL++ G F A P GTV+ G +FWN CC+F+ DD YLTS++ E I VDP+RVY++GHSNGG M+ +AC+H + AAIAS+ G + S C PS P+ VL++ A E+V+ E S VG+W +D C D ++P D + KL G ET VT + CK G E W + G +H P + + V+ +L +
Sbjct: 13 PLVLLLHGYGVSGLVEDLYMGLTSSAKTRGFFYAH-PTGTVDGSGSYFWNATDACCNFNGSTVDDSAYLTSVIDEIIARYPVDPKRVYLIGHSNGGYMSYRMACDHADKIAAIASLA-GAMWLDTSKCQPSGPVHVLQIHGTADEEVLYDGETTGSGSGLVGYPSAETTVGDWAEIDGCAKT----------ADTTQPP---------LDLDVKLAGAETTVTRYADQCKAGGSAELWTIEGGSHIPQIGDGFRTSVIDFLFA 254
BLAST of EWM27881.1 vs. NCBI_GenBank
Match: gi|521977473|ref|WP_020488744.1| (hypothetical protein [Dehalobacter sp. FTH1]) HSP 1 Score: 145.976 bits (367), Expect = 2.441e-36 Identity = 100/284 (35.21%), Postives = 134/284 (47.18%), Query Frame = 0
Query: 164 RPARVVLPDNYPADQSEDGSEDQAGAKLWPLIMMLHGYGSDASYHDHFLGLSARINQHGGFLALLPNGTVNSEGKHFWNG-IRCCDFDHQGPDDVTYLTSLVKEAIRTLDVDPRRVYMLGHSNGGAMTQILACEHGELFAAIASVTPGEIPS--VCAPSHPISVLEVCASEDVIVKAE----------LCASVVGNWTTVDRCPAAPHLETSRDYDCDPSRPFDDNEGYDQWRDHNCKLEGRETEVTGWV-CKGGSQVEFWWMRGAAHNPALSPQWSDDVVAWL 433
RPA + P + PA Q L+++LHGY S A+ F GL A +Q G F L P GT ++EGK FWN CC+FD DD YL+ L+ A+ +DP RVYM+GHSNGG M AC+H + AAIAS+ G + S CAPS P+SVL+V + D + + VG W D C SR SRP D D + + G + T W C G++V W + H P L+P +S ++ WL
Sbjct: 77 RPATLYTPPSRPAGQPA------------ALVVVLHGYTSHAADAIDFFGLRALADQRG-FAILAPQGTTDAEGKTFWNASASCCNFDGSTVDDSGYLSRLIAAAVERQGLDPARVYMVGHSNGGFMALTFACQHADQVAAIASLA-GALDSDPQCAPSEPVSVLQVHGTADPTISYDGGTIAGKPYTSAVQTVGVWRQADHC--------SRG-----SRPGDR-------LDADADVPGSDLRQTTWAGCAAGAEVSLWTITDGTHVPTLTPAFSVALIDWL 326
BLAST of EWM27881.1 vs. NCBI_GenBank
Match: gi|960440080|gb|KSW21507.1| (hypothetical protein ATM99_14260 [Cellulomonas sp. B6]) HSP 1 Score: 139.813 bits (351), Expect = 1.654e-34 Identity = 82/257 (31.91%), Postives = 122/257 (47.47%), Query Frame = 0
Query: 193 PLIMMLHGYGSDASYHDHFLGLSARINQHGGFLALLPNGTVNSEGKHFWNGI-RCCDFDHQGPDDVTYLTSLVKEAIRTLDVDPRRVYMLGHSNGGAMTQILACEHGELFAAIASVTPGE--IPSVCAPSHPISVLEVCASEDVIVKAELCA-----------SVVGNWTTVDRCPAAPHLETSRDYDCDPSRPFDDNEGYDQWRDHNCKLEGRETEVTGWVCKGGSQVEFWWMRGAAHNPALSPQWSDDVVAWLLS 435
PL++ LHGY + +LGL + ++ G+L P G V+ GK +WN CC FD PDD +LT +++ VDP+RV+++GHSNG M +AC H +L AA SV PS C P P+SVL+V A D ++ + + V +W +D C + L T+ D++ L G ET + W C G++V W + G H P S ++ DV AW+L+
Sbjct: 54 PLVVSLHGYSEVGASTATYLGLRDQ-SEEKGYLLASPEGLVDRAGKQYWNATPACCSFDGADPDDDGFLTRVIETVQAQYAVDPKRVFVIGHSNGAFMALRMACHHPDLIAAAVSVAGANDADPSACTPGRPVSVLQVHADTDEVISYQGGSVGPGAPYPGAEQTVADWRAIDECDDSATLGTA---------------------DYDSTLAGPETVTSSWSCSQGTEVGLWTIVGGTHGPTWSDAFAPDVTAWMLA 288
BLAST of EWM27881.1 vs. NCBI_GenBank
Match: gi|1177369091|ref|WP_082659613.1| (hypothetical protein [Cellulomonas sp. B6]) HSP 1 Score: 139.813 bits (351), Expect = 2.124e-34 Identity = 82/257 (31.91%), Postives = 122/257 (47.47%), Query Frame = 0
Query: 193 PLIMMLHGYGSDASYHDHFLGLSARINQHGGFLALLPNGTVNSEGKHFWNGI-RCCDFDHQGPDDVTYLTSLVKEAIRTLDVDPRRVYMLGHSNGGAMTQILACEHGELFAAIASVTPGE--IPSVCAPSHPISVLEVCASEDVIVKAELCA-----------SVVGNWTTVDRCPAAPHLETSRDYDCDPSRPFDDNEGYDQWRDHNCKLEGRETEVTGWVCKGGSQVEFWWMRGAAHNPALSPQWSDDVVAWLLS 435
PL++ LHGY + +LGL + ++ G+L P G V+ GK +WN CC FD PDD +LT +++ VDP+RV+++GHSNG M +AC H +L AA SV PS C P P+SVL+V A D ++ + + V +W +D C + L T+ D++ L G ET + W C G++V W + G H P S ++ DV AW+L+
Sbjct: 69 PLVVSLHGYSEVGASTATYLGLRDQ-SEEKGYLLASPEGLVDRAGKQYWNATPACCSFDGADPDDDGFLTRVIETVQAQYAVDPKRVFVIGHSNGAFMALRMACHHPDLIAAAVSVAGANDADPSACTPGRPVSVLQVHADTDEVISYQGGSVGPGAPYPGAEQTVADWRAIDECDDSATLGTA---------------------DYDSTLAGPETVTSSWSCSQGTEVGLWTIVGGTHGPTWSDAFAPDVTAWMLA 303
BLAST of EWM27881.1 vs. NCBI_GenBank
Match: gi|1209269426|ref|WP_088318722.1| (hypothetical protein [Kineosporia sp. R_H_3]) HSP 1 Score: 138.658 bits (348), Expect = 1.393e-33 Identity = 97/278 (34.89%), Postives = 138/278 (49.64%), Query Frame = 0
Query: 172 DNYPADQSEDGSEDQAGAKLWPLIMMLHGYGSDASYHDHFLGLSARINQHGGFLALLPNGTVNSEGKHFWNGI-RCCDFDHQGPDDVTYLTSLVKEAIRTLDVDPRRVYMLGHSNGGAMTQILACEHGELFAAIASVTPG--EIPSVCAPSHPISVLEVCASEDVIVKAE----------LCASVVGNWTTVDRCPAAPHLETSRDYDCDPSRPFDDNEGYDQWRDHNCKLEGRETEVTGWV-CKGGSQVEFWWMRGAAHNPALSPQWSDDVVAWLLS 435
D P D S ++ G PL+++LHGY S+++ D + GL R G L + PNGTV+ G FWN CCD G DD YL L+ R +DPRR+Y++GHSNGG M +AC+H + AA+ SV + C P+ P+SVL+V ++D +V E A V +W T+D C AP SR+ D D D + +L G ET V +V C G+ V+ W +R H P P + +DV+ +LL+
Sbjct: 72 DRRPPDISVPSGGNRRGP--MPLLLLLHGYTSNSAEVDLYFGLRERAAA-AGILYVRPNGTVDGRGAQFWNATDACCDLFDTGVDDSGYLLGLIDTLAREYPIDPRRIYVMGHSNGGFMAYRMACDHADRVAAVVSVAGAMHADRADCTPAAPVSVLQVHGTDDELVPYEGGQIQGDEVPPAARTVKDWATLDACDPAP----SRESDVDVVDRADLR--------GSTRLAGAETGVQVYVGCARGTSVQLWTVRDGRHVPTFLPAFGEDVLDFLLA 334 The following BLAST results are available for this feature:
BLAST of EWM27881.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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