EWM30419.1, cds279 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM30419.1 vs. NCBI_GenBank
Match: gi|585113079|gb|EWM30419.1| (sorting nexin-16 [Nannochloropsis gaditana]) HSP 1 Score: 712.605 bits (1838), Expect = 0.000e+0 Identity = 351/351 (100.00%), Postives = 351/351 (100.00%), Query Frame = 0
Query: 1 MDAIIVKYDQGQASFIRYTILVTLGDQSWSILRRFNDFSHLHEALCRSFPHFPGRLPPKKWFGRFNPEFLQERKVELQQYLDSVTSLPGFLERSQEGCVFFEVDRHLAGQDAEDKVHQDASALGSPYVPLVSLAIAPPLLSHSLRAPPPHMALVPSSLPSSFLLSLLLSPVFFLDDCRAQVEEARISSILWEASHAFINTSSPLHQVSIEQMDPEELAQQRNKLLQRTSGLRVLTATVPRLISATHLQQAHRQGQPQPGHDVVGRGKSARLRTGGRGVHGSDGRECSRGSIEEGGVGVIDVLSAPSRMTLGAQADLLEQQGLSVADKLREARLIRTTDDKDLIYRVGEERA 351
MDAIIVKYDQGQASFIRYTILVTLGDQSWSILRRFNDFSHLHEALCRSFPHFPGRLPPKKWFGRFNPEFLQERKVELQQYLDSVTSLPGFLERSQEGCVFFEVDRHLAGQDAEDKVHQDASALGSPYVPLVSLAIAPPLLSHSLRAPPPHMALVPSSLPSSFLLSLLLSPVFFLDDCRAQVEEARISSILWEASHAFINTSSPLHQVSIEQMDPEELAQQRNKLLQRTSGLRVLTATVPRLISATHLQQAHRQGQPQPGHDVVGRGKSARLRTGGRGVHGSDGRECSRGSIEEGGVGVIDVLSAPSRMTLGAQADLLEQQGLSVADKLREARLIRTTDDKDLIYRVGEERA
Sbjct: 1 MDAIIVKYDQGQASFIRYTILVTLGDQSWSILRRFNDFSHLHEALCRSFPHFPGRLPPKKWFGRFNPEFLQERKVELQQYLDSVTSLPGFLERSQEGCVFFEVDRHLAGQDAEDKVHQDASALGSPYVPLVSLAIAPPLLSHSLRAPPPHMALVPSSLPSSFLLSLLLSPVFFLDDCRAQVEEARISSILWEASHAFINTSSPLHQVSIEQMDPEELAQQRNKLLQRTSGLRVLTATVPRLISATHLQQAHRQGQPQPGHDVVGRGKSARLRTGGRGVHGSDGRECSRGSIEEGGVGVIDVLSAPSRMTLGAQADLLEQQGLSVADKLREARLIRTTDDKDLIYRVGEERA 351
BLAST of EWM30419.1 vs. NCBI_GenBank
Match: gi|553181384|ref|XP_005853558.1| (hypothetical protein NGA_0473010 [Nannochloropsis gaditana CCMP526] >gi|422295508|gb|EKU22807.1| hypothetical protein NGA_0473010 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 101.679 bits (252), Expect = 2.072e-23 Identity = 61/114 (53.51%), Postives = 61/114 (53.51%), Query Frame = 0
Query: 89 GFLERSQEGCVFFEVDRHLAGQDAEDKVHQDASALGSPYVPLVSLAIAPPLLSHSLRAPPPHMALVPSSLPSSFLLSLLLSPVFFLDDCRAQVEEARISSILWEASHAFINTSS 202
GF ERSQEGCVFFEVDRHLAGQDAEDKVHQDASALGSP AQVEEARISSILWEASHAFINTSS
Sbjct: 11 GFPERSQEGCVFFEVDRHLAGQDAEDKVHQDASALGSP----------------------------------------------------AQVEEARISSILWEASHAFINTSS 72
BLAST of EWM30419.1 vs. NCBI_GenBank
Match: gi|635365408|emb|CCI46201.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 85.5001 bits (210), Expect = 3.421e-15 Identity = 44/108 (40.74%), Postives = 63/108 (58.33%), Query Frame = 0
Query: 1 MDAIIVKYDQGQASFIRYTILVTLGDQSWSILRRFNDFSHLHEALCRSFPHF-PGRLPPKKWFGRFNPEFLQERKVELQQYLDSVTSLPGFLERSQEGCVFFEVDRHL 107
++A+I Y + Y I + SW I RRF+DF HLH L R F +LP K+WFGRF+ +FL +RK +LQQYL + ++PG L+ C F +V++HL
Sbjct: 4 LNALIAGY-ETVGDHTEYIIQINCQMGSWMISRRFSDFDHLHARLNRRFGDLIEAKLPEKQWFGRFDSQFLAKRKEKLQQYLAKLLNVPGILD-DVSLCRFLDVEKHL 109
BLAST of EWM30419.1 vs. NCBI_GenBank
Match: gi|325181442|emb|CCA15858.1| (conserved hypothetical protein [Albugo laibachii Nc14]) HSP 1 Score: 83.5741 bits (205), Expect = 1.503e-14 Identity = 43/108 (39.81%), Postives = 63/108 (58.33%), Query Frame = 0
Query: 1 MDAIIVKYDQGQASFIRYTILVTLGDQSWSILRRFNDFSHLHEALCRSFPHF-PGRLPPKKWFGRFNPEFLQERKVELQQYLDSVTSLPGFLERSQEGCVFFEVDRHL 107
++A+I Y + Y I + SW I RRF+DF HLH L R F +LP K+WFGRF+ +FL +R+ +LQQYL + ++PG L+ C F +V++HL
Sbjct: 4 LNALIAGY-ETVGDHTEYIIQINCQMGSWMISRRFSDFDHLHSRLNRRFGDLIDAKLPEKQWFGRFDSQFLAKRQDKLQQYLVKLLNVPGILD-DISLCRFLDVEKHL 109
BLAST of EWM30419.1 vs. NCBI_GenBank
Match: gi|1214702054|gb|OWZ14315.1| (hypothetical protein PHMEG_00012227 [Phytophthora megakarya]) HSP 1 Score: 78.9518 bits (193), Expect = 5.757e-13 Identity = 40/108 (37.04%), Postives = 59/108 (54.63%), Query Frame = 0
Query: 1 MDAIIVKYDQGQASFIRYTILVTLGDQSWSILRRFNDFSHLHEALCRSFPHF-PGRLPPKKWFGRFNPEFLQERKVELQQYLDSVTSLPGFLERSQEGCVFFEVDRHL 107
+ A+I YD + + ++ W I RRF+DF LH L R F LP K+WFGRF+P FL +R+ LQ+YLD + +PG L+ + F E+++HL
Sbjct: 6 VSALITSYDT-VGDHTEFIVEISCNGGLWRISRRFSDFDQLHSRLVRRFGDLIEASLPEKQWFGRFDPNFLIKRQASLQEYLDGLLQVPGILDDASLQH-FLELEKHL 111
BLAST of EWM30419.1 vs. NCBI_GenBank
Match: gi|675187057|ref|XP_008902413.1| (hypothetical protein PPTG_09272 [Phytophthora parasitica INRA-310] >gi|567966076|gb|ETK91534.1| hypothetical protein L915_04927 [Phytophthora parasitica] >gi|568097701|gb|ETN12443.1| hypothetical protein PPTG_09272 [Phytophthora parasitica INRA-310]) HSP 1 Score: 77.411 bits (189), Expect = 1.870e-12 Identity = 40/108 (37.04%), Postives = 59/108 (54.63%), Query Frame = 0
Query: 1 MDAIIVKYDQGQASFIRYTILVTLGDQSWSILRRFNDFSHLHEALCRSFPHF-PGRLPPKKWFGRFNPEFLQERKVELQQYLDSVTSLPGFLERSQEGCVFFEVDRHL 107
+ A+I YD + + ++ W I RRF+DF LH L R F LP K+WFGRF+P FL +R+ LQ+YLD + +PG L+ + F E+++HL
Sbjct: 6 VSALITGYDT-VGDHTEFIVEISCNGGLWRISRRFSDFDQLHSRLVRRFGDLIEVSLPEKQWFGRFDPNFLIKRQASLQEYLDGLLQVPGILDDASLQH-FLELEKHL 111
BLAST of EWM30419.1 vs. NCBI_GenBank
Match: gi|568054485|gb|ETM51265.1| (hypothetical protein L914_04877 [Phytophthora parasitica]) HSP 1 Score: 77.411 bits (189), Expect = 1.888e-12 Identity = 40/108 (37.04%), Postives = 59/108 (54.63%), Query Frame = 0
Query: 1 MDAIIVKYDQGQASFIRYTILVTLGDQSWSILRRFNDFSHLHEALCRSFPHF-PGRLPPKKWFGRFNPEFLQERKVELQQYLDSVTSLPGFLERSQEGCVFFEVDRHL 107
+ A+I YD + + ++ W I RRF+DF LH L R F LP K+WFGRF+P FL +R+ LQ+YLD + +PG L+ + F E+++HL
Sbjct: 6 VSALITGYDT-VGDHTEFIVEISCNGGLWRISRRFSDFDQLHSRLVRRFGDLIEVSLPEKQWFGRFDPNFLIKRQASLQEYLDGLLQVPGILDDASLQH-FLELEKHL 111
BLAST of EWM30419.1 vs. NCBI_GenBank
Match: gi|566028798|gb|ETI51709.1| (hypothetical protein F443_05056 [Phytophthora parasitica P1569] >gi|567994795|gb|ETL44945.1| hypothetical protein L916_04874 [Phytophthora parasitica] >gi|568024057|gb|ETL98099.1| hypothetical protein L917_04773 [Phytophthora parasitica] >gi|570332513|gb|ETO80461.1| hypothetical protein F444_05105 [Phytophthora parasitica P1976] >gi|570956499|gb|ETP21493.1| hypothetical protein F441_05062 [Phytophthora parasitica CJ01A1] >gi|970663539|gb|KUG00686.1| Serine/threonine-protein kinase Sgk3 [Phytophthora nicotianae]) HSP 1 Score: 77.411 bits (189), Expect = 1.888e-12 Identity = 40/108 (37.04%), Postives = 59/108 (54.63%), Query Frame = 0
Query: 1 MDAIIVKYDQGQASFIRYTILVTLGDQSWSILRRFNDFSHLHEALCRSFPHF-PGRLPPKKWFGRFNPEFLQERKVELQQYLDSVTSLPGFLERSQEGCVFFEVDRHL 107
+ A+I YD + + ++ W I RRF+DF LH L R F LP K+WFGRF+P FL +R+ LQ+YLD + +PG L+ + F E+++HL
Sbjct: 6 VSALITGYDT-VGDHTEFIVEISCNGGLWRISRRFSDFDQLHSRLVRRFGDLIEVSLPEKQWFGRFDPNFLIKRQASLQEYLDGLLQVPGILDDASLQH-FLELEKHL 111
BLAST of EWM30419.1 vs. NCBI_GenBank
Match: gi|570991652|gb|ETP49343.1| (hypothetical protein F442_05123 [Phytophthora parasitica P10297]) HSP 1 Score: 77.411 bits (189), Expect = 1.999e-12 Identity = 40/108 (37.04%), Postives = 59/108 (54.63%), Query Frame = 0
Query: 1 MDAIIVKYDQGQASFIRYTILVTLGDQSWSILRRFNDFSHLHEALCRSFPHF-PGRLPPKKWFGRFNPEFLQERKVELQQYLDSVTSLPGFLERSQEGCVFFEVDRHL 107
+ A+I YD + + ++ W I RRF+DF LH L R F LP K+WFGRF+P FL +R+ LQ+YLD + +PG L+ + F E+++HL
Sbjct: 6 VSALITGYDT-VGDHTEFIVEISCNGGLWRISRRFSDFDQLHSRLVRRFGDLIEVSLPEKQWFGRFDPNFLIKRQASLQEYLDGLLQVPGILDDASLQH-FLELEKHL 111
BLAST of EWM30419.1 vs. NCBI_GenBank
Match: gi|695416580|ref|XP_009526877.1| (hypothetical protein PHYSODRAFT_255667 [Phytophthora sojae] >gi|348678002|gb|EGZ17819.1| hypothetical protein PHYSODRAFT_255667 [Phytophthora sojae]) HSP 1 Score: 77.0258 bits (188), Expect = 2.421e-12 Identity = 40/108 (37.04%), Postives = 59/108 (54.63%), Query Frame = 0
Query: 1 MDAIIVKYDQGQASFIRYTILVTLGDQSWSILRRFNDFSHLHEALCRSFPHF-PGRLPPKKWFGRFNPEFLQERKVELQQYLDSVTSLPGFLERSQEGCVFFEVDRHL 107
+ A+I YD + + ++ W I RRF+DF LH L R F LP K+WFGRF+P FL +R+ LQ+YLD + +PG L+ + F E+++HL
Sbjct: 6 VSALITGYDT-VGDHTEFIVEISCNGGLWRISRRFSDFDQLHSRLVRRFGDLIEVSLPEKQWFGRFDPNFLIKRQASLQEYLDGLLQVPGILDDASLQH-FLELEKHL 111 The following BLAST results are available for this feature:
BLAST of EWM30419.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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