EWM30378.1, cds277 (CDS) Nannochloropsis gaditana

Overview
NameEWM30378.1
Unique Namecds277
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002455.1:700306..700442 +
Alignment locationCM002455.1:700484..700669 +
Alignment locationCM002455.1:700711..700858 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM30378.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100026g39.10632.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:700306..700442 +
CM002455.1supercontigCM002455.1:700484..700669 +
CM002455.1supercontigCM002455.1:700711..700858 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM30378.1 vs. NCBI_GenBank
Match: gi|585113038|gb|EWM30378.1| (hypothetical protein Naga_100026g39 [Nannochloropsis gaditana])

HSP 1 Score: 314.309 bits (804), Expect = 1.998e-108
Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 0 
Query:    1 MTLLGSGPSEGLWIGSWRSTDGKCCRSEGGIMARESPGGDGMGLILEGELKRASDREEEIGGGVHCSWNVSVREYLHSTYKLCPRSWGMGLAGPQQIRPSVLRYRIIQATIEVITMSCLILRRVGGKARVRDADASRRRWPHPSASGKEKKKKKQN 156
            MTLLGSGPSEGLWIGSWRSTDGKCCRSEGGIMARESPGGDGMGLILEGELKRASDREEEIGGGVHCSWNVSVREYLHSTYKLCPRSWGMGLAGPQQIRPSVLRYRIIQATIEVITMSCLILRRVGGKARVRDADASRRRWPHPSASGKEKKKKKQN
Sbjct:    1 MTLLGSGPSEGLWIGSWRSTDGKCCRSEGGIMARESPGGDGMGLILEGELKRASDREEEIGGGVHCSWNVSVREYLHSTYKLCPRSWGMGLAGPQQIRPSVLRYRIIQATIEVITMSCLILRRVGGKARVRDADASRRRWPHPSASGKEKKKKKQN 156
The following BLAST results are available for this feature:
BLAST of EWM30378.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585113038|gb|EWM30378.1|1.998e-108100.00hypothetical protein Naga_100026g39 [Nannochlorops... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna277rna277Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications