EWM27919.1, cds2750 (CDS) Nannochloropsis gaditana

Overview
NameEWM27919.1
Unique Namecds2750
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002459.1:1134063..1135708 +
Alignment locationCM002459.1:1135864..1136152 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM27919.1
Productabc subfamily abcg
Orig transcript idgnl|cribi|Naga_100285g3.3540.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:1134063..1135708 +
CM002459.1supercontigCM002459.1:1135864..1136152 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0000166nucleotide binding
GO:0016887ATPase activity
GO:0005524ATP binding
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR017871ABC_transporter_CS
IPR003439ABC_transporter-like
IPR013525ABC_2_trans
IPR027417P-loop_NTPase
IPR003593AAA+_ATPase
Homology
BLAST of EWM27919.1 vs. NCBI_GenBank
Match: gi|585110259|gb|EWM27919.1| (abc subfamily abcg [Nannochloropsis gaditana])

HSP 1 Score: 1333.93 bits (3451), Expect = 0.000e+0
Identity = 644/644 (100.00%), Postives = 644/644 (100.00%), Query Frame = 0
Query:    1 MMTHEDYKDASVVDQTPTNNLAVKIQHKLEWHVESFKVQIRRSRAPGKGTASTTTQTTKTILQKVAGCAVSGELTAILGPSGAGKTTLLECISLRNRNFDGCVQYDGQAPEGRFFTLSAFVHQADMLYGFLTPREHLTFHAIARMSGGSRTAARGLPEPGASQTSRGQSWQAEKMSSESMARRVEEVIATVKLEKCADTLIGGSDPVFNVKGISGGERKRLTIATELLQTNEIIFLDEPSSGLDSVMSESIFQTLKDLTTQGRIVIATVHCPSSKTYHLFSNLILLTCDGRLAYSGPAAQALSYFQAALGIECPQHYNPADFVLELVSAEPGVPLQEELRRMDALSLAYAQSFMKIQNPLPADDKHKALHDVRGQGASDWVFFKLNLWRGGLQLARDRITLILWAAVSALIGALFGVLYWQLAASNWRNLMGLIFSAVVGNVFTGCLGVVMRFPMEWTLVVREFSSGANAVGPYMIARFFTTLPLSYGPVLMSSIIYWCTGMDPDAGTYLIFVLIFVSFNWSCFSLGQWISSFSANPLVAMTIMPGFVTPMIMFSGLLIERSSVPVWLAWIEDVSVVNYAFDTLMAQQMHILPGNQGEVVQQFIQFNPRKMGWNVGMLWILTAAFQVLTYVNLRVRLRASRSVK 644
            MMTHEDYKDASVVDQTPTNNLAVKIQHKLEWHVESFKVQIRRSRAPGKGTASTTTQTTKTILQKVAGCAVSGELTAILGPSGAGKTTLLECISLRNRNFDGCVQYDGQAPEGRFFTLSAFVHQADMLYGFLTPREHLTFHAIARMSGGSRTAARGLPEPGASQTSRGQSWQAEKMSSESMARRVEEVIATVKLEKCADTLIGGSDPVFNVKGISGGERKRLTIATELLQTNEIIFLDEPSSGLDSVMSESIFQTLKDLTTQGRIVIATVHCPSSKTYHLFSNLILLTCDGRLAYSGPAAQALSYFQAALGIECPQHYNPADFVLELVSAEPGVPLQEELRRMDALSLAYAQSFMKIQNPLPADDKHKALHDVRGQGASDWVFFKLNLWRGGLQLARDRITLILWAAVSALIGALFGVLYWQLAASNWRNLMGLIFSAVVGNVFTGCLGVVMRFPMEWTLVVREFSSGANAVGPYMIARFFTTLPLSYGPVLMSSIIYWCTGMDPDAGTYLIFVLIFVSFNWSCFSLGQWISSFSANPLVAMTIMPGFVTPMIMFSGLLIERSSVPVWLAWIEDVSVVNYAFDTLMAQQMHILPGNQGEVVQQFIQFNPRKMGWNVGMLWILTAAFQVLTYVNLRVRLRASRSVK
Sbjct:    1 MMTHEDYKDASVVDQTPTNNLAVKIQHKLEWHVESFKVQIRRSRAPGKGTASTTTQTTKTILQKVAGCAVSGELTAILGPSGAGKTTLLECISLRNRNFDGCVQYDGQAPEGRFFTLSAFVHQADMLYGFLTPREHLTFHAIARMSGGSRTAARGLPEPGASQTSRGQSWQAEKMSSESMARRVEEVIATVKLEKCADTLIGGSDPVFNVKGISGGERKRLTIATELLQTNEIIFLDEPSSGLDSVMSESIFQTLKDLTTQGRIVIATVHCPSSKTYHLFSNLILLTCDGRLAYSGPAAQALSYFQAALGIECPQHYNPADFVLELVSAEPGVPLQEELRRMDALSLAYAQSFMKIQNPLPADDKHKALHDVRGQGASDWVFFKLNLWRGGLQLARDRITLILWAAVSALIGALFGVLYWQLAASNWRNLMGLIFSAVVGNVFTGCLGVVMRFPMEWTLVVREFSSGANAVGPYMIARFFTTLPLSYGPVLMSSIIYWCTGMDPDAGTYLIFVLIFVSFNWSCFSLGQWISSFSANPLVAMTIMPGFVTPMIMFSGLLIERSSVPVWLAWIEDVSVVNYAFDTLMAQQMHILPGNQGEVVQQFIQFNPRKMGWNVGMLWILTAAFQVLTYVNLRVRLRASRSVK 644          
BLAST of EWM27919.1 vs. NCBI_GenBank
Match: gi|553189117|ref|XP_005854935.1| (atp-binding cassette [Nannochloropsis gaditana CCMP526] >gi|422294123|gb|EKU21423.1| atp-binding cassette [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 1328.15 bits (3436), Expect = 0.000e+0
Identity = 641/644 (99.53%), Postives = 641/644 (99.53%), Query Frame = 0
Query:    1 MMTHEDYKDASVVDQTPTNNLAVKIQHKLEWHVESFKVQIRRSRAPGKGTASTTTQTTKTILQKVAGCAVSGELTAILGPSGAGKTTLLECISLRNRNFDGCVQYDGQAPEGRFFTLSAFVHQADMLYGFLTPREHLTFHAIARMSGGSRTAARGLPEPGASQTSRGQSWQAEKMSSESMARRVEEVIATVKLEKCADTLIGGSDPVFNVKGISGGERKRLTIATELLQTNEIIFLDEPSSGLDSVMSESIFQTLKDLTTQGRIVIATVHCPSSKTYHLFSNLILLTCDGRLAYSGPAAQALSYFQAALGIECPQHYNPADFVLELVSAEPGVPLQEELRRMDALSLAYAQSFMKIQNPLPADDKHKALHDVRGQGASDWVFFKLNLWRGGLQLARDRITLILWAAVSALIGALFGVLYWQLAASNWRNLMGLIFSAVVGNVFTGCLGVVMRFPMEWTLVVREFSSGANAVGPYMIARFFTTLPLSYGPVLMSSIIYWCTGMDPDAGTYLIFVLIFVSFNWSCFSLGQWISSFSANPLVAMTIMPGFVTPMIMFSGLLIERSSVPVWLAWIEDVSVVNYAFDTLMAQQMHILPGNQGEVVQQFIQFNPRKMGWNVGMLWILTAAFQVLTYVNLRVRLRASRSVK 644
            M THEDY DASVVDQTPTNN AVKIQHKLEWHVESFKVQIRRSRAPGKGTASTTTQTTKTILQKVAGCAVSGELTAILGPSGAGKTTLLECISLRNRNFDGCVQYDGQAPEGRFFTLSAFVHQADMLYGFLTPREHLTFHAIARMSGGSRTAARGLPEPGASQTSRGQSWQAEKMSSESMARRVEEVIATVKLEKCADTLIGGSDPVFNVKGISGGERKRLTIATELLQTNEIIFLDEPSSGLDSVMSESIFQTLKDLTTQGRIVIATVHCPSSKTYHLFSNLILLTCDGRLAYSGPAAQALSYFQAALGIECPQHYNPADFVLELVSAEPGVPLQEELRRMDALSLAYAQSFMKIQNPLPADDKHKALHDVRGQGASDWVFFKLNLWRGGLQLARDRITLILWAAVSALIGALFGVLYWQLAASNWRNLMGLIFSAVVGNVFTGCLGVVMRFPMEWTLVVREFSSGANAVGPYMIARFFTTLPLSYGPVLMSSIIYWCTGMDPDAGTYLIFVLIFVSFNWSCFSLGQWISSFSANPLVAMTIMPGFVTPMIMFSGLLIERSSVPVWLAWIEDVSVVNYAFDTLMAQQMHILPGNQGEVVQQFIQFNPRKMGWNVGMLWILTAAFQVLTYVNLRVRLRASRSVK
Sbjct:    1 MTTHEDYMDASVVDQTPTNNFAVKIQHKLEWHVESFKVQIRRSRAPGKGTASTTTQTTKTILQKVAGCAVSGELTAILGPSGAGKTTLLECISLRNRNFDGCVQYDGQAPEGRFFTLSAFVHQADMLYGFLTPREHLTFHAIARMSGGSRTAARGLPEPGASQTSRGQSWQAEKMSSESMARRVEEVIATVKLEKCADTLIGGSDPVFNVKGISGGERKRLTIATELLQTNEIIFLDEPSSGLDSVMSESIFQTLKDLTTQGRIVIATVHCPSSKTYHLFSNLILLTCDGRLAYSGPAAQALSYFQAALGIECPQHYNPADFVLELVSAEPGVPLQEELRRMDALSLAYAQSFMKIQNPLPADDKHKALHDVRGQGASDWVFFKLNLWRGGLQLARDRITLILWAAVSALIGALFGVLYWQLAASNWRNLMGLIFSAVVGNVFTGCLGVVMRFPMEWTLVVREFSSGANAVGPYMIARFFTTLPLSYGPVLMSSIIYWCTGMDPDAGTYLIFVLIFVSFNWSCFSLGQWISSFSANPLVAMTIMPGFVTPMIMFSGLLIERSSVPVWLAWIEDVSVVNYAFDTLMAQQMHILPGNQGEVVQQFIQFNPRKMGWNVGMLWILTAAFQVLTYVNLRVRLRASRSVK 644          
BLAST of EWM27919.1 vs. NCBI_GenBank
Match: gi|585106190|gb|EWM24668.1| (abc subfamily abcg [Nannochloropsis gaditana])

HSP 1 Score: 673.7 bits (1737), Expect = 0.000e+0
Identity = 316/561 (56.33%), Postives = 406/561 (72.37%), Query Frame = 0
Query:   78 LGPSGAGKTTLLECISLRNRNFDGCVQYDGQAPEGRFFTLSAFVHQADMLYGFLTPREHLTFHAIARMSGGSRTAARGLPEPGASQTSRGQSWQAEKMSSESMARRVEEVIATVKLEKCADTLIGGSDPVFNVKGISGGERKRLTIATELLQTNEIIFLDEPSSGLDSVMSESIFQTLKDLTTQGRIVIATVHCPSSKTYHLFSNLILLTCDGRLAYSGPAAQALSYFQAALGIECPQHYNPADFVLELVSAEPGVPLQEELRRMDALSLAYAQSFMKIQNPLPADDKHKALHDVRGQGASDWVFFKLNLWRGGLQLARDRITLILWAAVSALIGALFGVLYWQLAASNWRNLMGLIFSAVVGNVFTGCLGVVMRFPMEWTLVVREFSSGANAVGPYMIARFFTTLPLSYGPVLMSSIIYWCTGMDPDAGTYLIFVLIFVSFNWSCFSLGQWISSFSANPLVAMTIMPGFVTPMIMFSGLLIERSSVPVWLAWIEDVSVVNYAFDTLMAQQMHILPGNQGEVVQQFIQFNPRKMGWNVGMLWILTAAFQVLTYVNLRVRLR 638
            +GPSGAGKTTLLECISLRNR F+G V YD + P G FFT S  VHQ ++L+GF+TPREHL FHAIARMS                          +  + E +  RVEEV+  VKLEKCADT++GG+DP++  KG+SGGERKRL+IA ELL   ++IFLDEPSSGLDSVMSESIF TLKDLT  GRIV+A+VHCPSS+    F++++LLT DGRLAY G    A+ YF ++L  +CP++YNP+DF L+L+SA PG    +E  RM+ L  AY  S M  + PL  D+ HK    V G  AS W  FK+NLWR  +QL RD +T +LW  VSAL+G LFG+LYWQ A SNWRNL+GL+FS VV N+FT  L V+MRFP++W +VVRE+ SG+NA+GPY++ARF    P+ YGP L+ +++YW TGMD D G ++IF L F+S NW+  S+GQ++SSFSANP + +TI+P FV PMIMFSG+L ERSSVP WL+W++ +S+VNY+F  LM QQ+HILP     +V QF++ NP  MGW++GMLWI+   FQ+LTY+NL +RLR
Sbjct:    1 MGPSGAGKTTLLECISLRNRKFEGAVHYDNRGPTGEFFTCSVLVHQKELLFGFMTPREHLLFHAIARMS--------------------------KNHTIEQINARVEEVLQEVKLEKCADTIVGGTDPIYMRKGLSGGERKRLSIAAELLLAPQLIFLDEPSSGLDSVMSESIFGTLKDLTQSGRIVVASVHCPSSEMCQQFTHVLLLTFDGRLAYHGRQDAAIRYF-SSLSYQCPENYNPSDFYLKLISATPGADPAQEKARMNQLVAAYNASDMVRKTPLAPDETHKQFQMVFGH-ASSWTLFKINLWRAFIQLQRDWVTFVLWGLVSALVGGLFGILYWQQARSNWRNLLGLLFSVVVANLFTSSLAVMMRFPLDWAIVVREYFSGSNAIGPYLVARFIVDAPMGYGPFLLITLLYWMTGMDSDIGKFVIFALTFISGNWASTSMGQYVSSFSANPFIGLTILPAFVAPMIMFSGILYERSSVPAWLSWLQTLSIVNYSFSALMIQQIHILPKPLALLVMQFVELNPDTMGWDIGMLWIMNFGFQILTYINLSLRLR 533          
BLAST of EWM27919.1 vs. NCBI_GenBank
Match: gi|585108726|gb|EWM26638.1| (abc subfamily abcg [Nannochloropsis gaditana])

HSP 1 Score: 667.537 bits (1721), Expect = 0.000e+0
Identity = 328/618 (53.07%), Postives = 433/618 (70.06%), Query Frame = 0
Query:   21 LAVKIQHKLEWHVESFKVQIRRSRAPGKGTASTTTQTTKTILQKVAGCAVSGELTAILGPSGAGKTTLLECISLRNRNFDGCVQYDGQAPEGRFFTLSAFVHQADMLYGFLTPREHLTFHAIARMSGGSRTAARGLPEPGASQTSRGQSWQAEKMSSESMARRVEEVIATVKLEKCADTLIGGSDPVFNVKGISGGERKRLTIATELLQTNEIIFLDEPSSGLDSVMSESIFQTLKDLTTQGRIVIATVHCPSSKTYHLFSNLILLTCDGRLAYSGPAAQALSYFQAALGIECPQHYNPADFVLELVSAEPGVPLQEELRRMDALSLAYAQSFMKIQNPLPADDKHKALHDVRGQGASDWVFFKLNLWRGGLQLARDRITLILWAAVSALIGALFGVLYWQLAASNWRNLMGLIFSAVVGNVFTGCLGVVMRFPMEWTLVVREFSSGANAVGPYMIARFFTTLPLSYGPVLMSSIIYWCTGMDPDAGTYLIFVLIFVSFNWSCFSLGQWISSFSANPLVAMTIMPGFVTPMIMFSGLLIERSSVPVWLAWIEDVSVVNYAFDTLMAQQMHILPGNQGEVVQQFIQFNPRKMGWNVGMLWILTAAFQVLTYVNLRVRLR 638
            ++V I+H LEWHVE++ V      A  KG         + ILQ +AG   SG+LTAI+GPSG GKTTLLECISLRNR FDG V +DG+AP G  FT+S  VHQ ++L+GF+TPRE+LTFH +ARM                   +R Q           + +R++EV++ +KLEKCADTL+GG+DP F  KG+SGGERKRL IA E+L    +IFLDEPSSGLDSVMSESIFQ+LKDL   GRIV+A+VHCPSS+   LFS+L+LLT DGR+AY GP  Q + YF +AL   CP+HYNPADF L+L+S  PG   + E++RMD L+ A+ +S M++  PLP D+KH+ L  V G  AS + F KLN WR  L+L RD+  ++LW  +S ++G L G++Y Q A ++WRNL+GL+FS VV ++F G LGV+MRFP EW ++VRE  SG NAVGPY+ A F+  LP++YGP L+ +++YW TGMDP+   YL F  I++SF+ +C  LGQ++SS S NP+V MTI+P FV PMIMFSG+L ++S+VPVWL+W+  VS++NY+F  LMA+Q+HILP NQ  ++  FI  N    G NV  LWI++AA  +LTY  L VRLR
Sbjct:   18 VSVGIRHTLEWHVEAYMVP-----AGKKGE-------FRNILQGIAGKTESGQLTAIMGPSGCGKTTLLECISLRNRRFDGAVHFDGRAPGGDAFTVSVLVHQKELLFGFMTPREYLTFHGLARME---------------HTHTRAQ-----------IDQRIQEVLSDMKLEKCADTLVGGTDPFFQKKGLSGGERKRLAIAYEMLLAPSMIFLDEPSSGLDSVMSESIFQSLKDLADGGRIVLASVHCPSSEACQLFSHLMLLTYDGRVAYHGPTLQGIGYF-SALKYFCPEHYNPADFYLKLISFTPGAEAEGEVQRMDLLNDAFQKSDMRLMKPLPTDNKHRGLAGVHGIKASTFTFLKLNFWRATLRLRRDKTFVVLWGIISFIVGLLLGIIYLQQAPASWRNLLGLLFSLVVADIFMGSLGVIMRFPSEWAIIVRECYSGVNAVGPYLFASFWGILPMAYGPFLLVTVMYWMTGMDPNFVAYLKFAGIYLSFDIACLELGQFVSSLSGNPMVGMTILPAFVAPMIMFSGVLYQKSTVPVWLSWMHHVSLINYSFSALMAEQIHILPENQANLLAAFIDLNKNSAGLNVLYLWIMSAALLLLTYFTLTVRLR 596          
BLAST of EWM27919.1 vs. NCBI_GenBank
Match: gi|585109266|gb|EWM27089.1| (abc subfamily abcg [Nannochloropsis gaditana])

HSP 1 Score: 467.233 bits (1201), Expect = 8.243e-154
Identity = 262/631 (41.52%), Postives = 381/631 (60.38%), Query Frame = 0
Query:   25 IQHKLEWHVESFKVQIRRSRAPGKGTASTTTQTTKTILQKVAGCAVSGELTAILGPSGAGKTTLLECISLRNRNFDGCVQYDGQAPEGRFFTLSAFVHQADMLYGFLTPREHLTFHAIARMSGGSRTAARGLPEPGASQTSRGQSWQAEKMSSESMARRVEEVIATVKLEKCADTLIGGSDPVFNVKGISGGERKRLTIATELLQTNEIIFLDEPSSGLDSVMSESIFQTLKDLTTQGRI-VIATVHCPSSKTYHLFSNLILLTCDGRLAYSGPAAQALSYFQAALGIECPQHYNPADFVLELVSAEPG--VPLQEELRRM-DALSLAYAQSFMKIQNP-LPA----------DDKHKALHDVRGQGASDWVFFKLNLWRGGLQLARDRITLILWAAVSALIGALFGVLYWQLAASNWRNLMGLIFSAVVGNVFTGCLGVVMRFPMEWTLVVREFSSGANAVGPYMIARFFTTLPLSYGPVLMSSIIYWCTGMDPDAGTYLIFVLIFVSFNWSCFSLGQWISSFSANPLVAMTIMPGFVTPMIMFSGLLIERSSVPVWLAWIEDVSVVNYAFDTLMAQQMHILPGNQGEVVQQFIQFNPRKMGWNVGMLWILTAAFQVLTYVNLRVRLRAS 640
            + ++L WH+ SFKV  +R     K +        K+IL  VAG +V GE+TAI+G SGAGKTTLLEC++LR+R F G V ++G+A  G +FT SA VHQ ++L GFLT  EHL FH  ARMS                          ++ S + +  RV  VI  V L KC  TL+GG     N KG+SGGERKRLTIATELL   + IFLDEP++ LDSVM+  +   L+ L    RI V+AT+H PSS+ + LFS+++LLT DGRLA+ G  + AL Y  + L    P  YNPAD ++ LV ++PG     +EE R+  D L  ++A S     +P LP           ++ H++L  V+GQ AS W  F+LNL RG LQ +R+ ++  L+  V  +IG  FG LY+Q AAS+WRNL+GL+++ VV  ++   L V++R P++W L++RE+ +GANA GPY++A+    LP +YGP+L+ + +YW TG+ P    +L F  +      +  ++   + S SANP++ + I+P F+TPM++FSG L + +++P +LAW+  +S+VNY F  L+  Q  +LP     V  +F+  +P  +G N+ ML  +T  F  LTY+ L +RLR +
Sbjct:   38 LPNQLTWHIRSFKVGSQRCWPWTKRSIQR-----KSILTDVAGQSVGGEITAIMGASGAGKTTLLECLALRSRQFKGRVTWNGEAVRGDYFTASALVHQREVLCGFLTVEEHLLFHGTARMS--------------------------DRFSPKEIEARVRNVIEDVGLSKCRKTLVGGPGAPQNKKGLSGGERKRLTIATELLLCPQAIFLDEPTTSLDSVMAGHVVALLRQLALSRRILVMATIHAPSSQIFSLFSHVLLLTNDGRLAFHGTISNALLYASSCLKRPLPDAYNPADHLVRLVVSKPGGGASAREERRKENDWLVQSFAAS--AYGDPELPERGSHRDKACEENSHRSLRGVQGQHASAWTLFRLNLRRGLLQTSRNSLSFWLYGMVMGVIGLCFGTLYFQQAASSWRNLVGLLYALVVALLYMCPLTVILRAPLDWPLLLREYFAGANAAGPYLLAKILYELPFAYGPLLLVAFLYWMTGLTPSLAAFLQFAGVVALTTQASCAMALMVGSLSANPMLTLGILPAFITPMVLFSGFLYDTATLPSYLAWLPKISIVNYGFAALITLQQSLLPAELRGVALKFVNVDPEALGANLLMLTGMTVIFYALTYMFLTLRLRTA 635          
BLAST of EWM27919.1 vs. NCBI_GenBank
Match: gi|585109183|gb|EWM27013.1| (white [Nannochloropsis gaditana])

HSP 1 Score: 424.091 bits (1089), Expect = 3.660e-137
Identity = 233/599 (38.90%), Postives = 353/599 (58.93%), Query Frame = 0
Query:   54 TTQTTKTILQKVAGCAVSGELTAILGPSGAGKTTLLECISLRNRNFDGCVQYDGQAPEGRFFTLSAFVHQADMLYGFLTPREHLTFHAIARMSGGSRTAARGLPEPGASQTSRGQSWQAEKMSSESMARRVEEVIATVKLEKCADTLIGGSDPVFNVKGISGGERKRLTIATELLQTNEIIFLDEPSSGLDSVMSESIFQTLKDLTTQG-----RIVIATVHCPSSKTYHLFSNLILLTCDGRLAYSGPAAQALSYFQAALGIECPQHYNPADFVLELVSAEPGVPLQEELRRMDALSLAYAQSFMKIQNPLPADDKHKALHDVR---GQGASDWVFFKLNLWRGGLQLARDRITLILWAAVSALIGALFGVLYWQLAASNWRNLMGLIFSAVVGNVFTGCLGVVMRFPMEWTLVVREFSSGANAVGPYMIARFFTTLPLSYGPVLMSSIIYWCTGMDPDAGTYLIFVLIFVSFNWSCFSLGQWISSFSANPLVAMTIMPGFVTPMIMFSGLLIERSSVPVWLAWIEDVSVVNYAFDTLMAQQMHIL-PGNQGEVVQQFIQFNPRKMGWNVGMLWILTAAFQVLTYVNLRVRLRASRSV 643
            +T   K IL  +AG  V+GE TA++GPSGAGKTTL++CI+LR R+F+G +  DG++P+  +FT + +VHQ ++ +  LT REHL FHAI R+ G                          K + +   +RV+EVI  V+L +CADT+IGG +    VKG+SGGERKRL+I TELL   +IIFLDEP+SGLDSVM E +   L  L T       R+++  +H PSS+ +  FS+++LL   G +AY G       YF++ LG + P +YNPADF LE+VSA+PG  +Q +       + A     M+  N LP +  H     V    G GA   +  K+N+WR   Q +RD+ TL     +  ++G +FG+L+   A S+WRNLMG++F+ VV  +    + V ++FP+EW++ +RE+ +GANA+GPY I R    +P     +L+  + YW +G+     +++ +  IF        S G   SSFSA+P++ + I P   TPMI+FSG+L ERSSVP++L WI+++SVVNY F  L+  + + L  G    +V  F+Q +    G  +G L+ L   ++  +++ L++R+R + S+
Sbjct:   60 STPKGKQILHDIAGRTVTGEFTALMGPSGAGKTTLMDCIALRQRSFEGAIHVDGRSPKSDYFTQTGYVHQKELFFSSLTSREHLVFHAINRLGG--------------------------KYTKDQCMKRVDEVINEVELARCADTIIGGGEFAL-VKGLSGGERKRLSIGTELLSHPKIIFLDEPTSGLDSVMGELVTNLLAALATGKNGGPRRVIMCVIHTPSSRMWSHFSHVLLLATGGFMAYHGTREALFPYFKS-LGYDVPPNYNPADFALEVVSAKPGAEVQGKTAVWIVENFA---KRMEKFNRLPPETNHHTFTGVATSGGTGAGYLLQTKMNIWRAVTQSSRDKGTLYALVGMLLILGMVFGLLFLNQAHSSWRNLMGMMFALVVAVLILCSMNVALKFPVEWSIFMREYYTGANALGPYFIGRTIADIPFLALFLLLVIVPYWMSGLTASFASFIRYCFIFFLIINGSASTGYLASSFSADPVLGLAITPVIDTPMILFSGMLYERSSVPLYLKWIQNISVVNYGFAALVINECNSLGDGPMRWLVLHFLQIDLGMFGACIGWLFGLALGYRFASFLVLKLRIRYATSL 627          
BLAST of EWM27919.1 vs. NCBI_GenBank
Match: gi|585106124|gb|EWM24607.1| (abc subfamily abcg [Nannochloropsis gaditana])

HSP 1 Score: 384.415 bits (986), Expect = 2.946e-121
Identity = 221/605 (36.53%), Postives = 337/605 (55.70%), Query Frame = 0
Query:   29 LEWHVESFKVQIRRSRAPGKGTASTTTQTTKTILQKVAGCAVSGELTAILGPSGAGKTTLLECISLRNRNFDGCVQYDGQAPEGRFFTLSAFVHQADMLYGFLTPREHLTFHAIARMSGGSRTAARGLPEPGASQTSRGQSWQAEKMSSESMARRVEEVIATVKLEKCADTLIGGSDPVFNVKGISGGERKRLTIATELLQTNEIIFLDEPSSGLDSVMSESIFQTLKDLTTQG--RIVIATVHCPSSKTYHLFSNLILLTCDGRLAYSGPAAQALSYFQAALGIECPQHYNPADFVLELVSAE---------PGVPLQE-------------ELRRMDALSLAYAQSFMKIQNPLPADDKHKALHDVRGQGASDW-VFFKLNLWRGGLQLARDRITLILWAAVSALIGALFGVLYWQ-LAASNWRNLMGLIFSAVVGNVFTGCLGVVMRFPMEWTLVVREFSSGANAVGPYMIARFFTTLPLSYGPVLMSSIIYWCTGMDPDAGTYLIFVLIFVSFNWSCFSLGQWISSFSANPLVAMTIMPGFVTPMIMFSGLLIERSSVPVWLAWIEDVSVVNYAFDTLMAQQMHILPGNQGEVVQQFIQFN 607
            LEW++  +++++++ +             + T+L+ +AG A +G   A++GPSG GKT+LL+C++LR R+F+G +  +G+A  G +F  + +VHQ ++ +  LT REHL FHA+  +S                             S E    RVE V+  V L K  D  IGG D ++ V GISGGERKRL IATELL    I+ LDEP+SGLDSVM E +   LK +  Q   R+V+A +H PSS+ + L S++ LLT  G LAY GP  + L + +  LG  CP ++NPADF+LEL SA+          GV  QE             E      L  A   +  +   PL  +++HK +  V+G GAS+W V F+ NLWR  L   R+ + L +   ++  +G +FGVLY+Q +   N RN  G +FS +V  +    + V M FP ++ +++RE+ +G N+   Y + R   + P S   ++M  + Y+  G+ P A  +  + L+F   N++  S+G   SSFSANP+V ++I+P F+TPMI+FSG+L ER+SVP  L WI+D+SV+NY+F  ++  Q+  + G     +  F+Q  
Sbjct:   75 LEWNISKYEIKLKKRK-------------SLTVLRSIAGRAENGSFNAVMGPSGCGKTSLLQCLALRTRDFEGSLTLNGKALTGAYFAHTGYVHQKELFFPHLTVREHLVFHALNHLS--------------------------RHKSLEECIARVEAVMEEVDLTKVGDQKIGGGD-LYLVAGISGGERKRLNIATELLGNPRILLLDEPTSGLDSVMGELVCLLLKSIAVQAPRRLVLAAIHTPSSRVFTLVSHVTLLTSHGELAYWGPRDKLLLFLEG-LGYRCPSYFNPADFILELASAKVIAGQAGAPGGVGGQELASPGNVSGSLLVESTSSGKLVAACKSTLSRDLAPLGVNNRHKEVVGVQGPGASNWAVSFRTNLWRSWLSQRREYVGLAVAVLMNTALGLVFGVLYFQQIPHDNGRNTAGYLFSLLVTLLIASSIAVCMNFPFDFAILMREYYAGVNSPLGYFLGRTLASEPPSLAFMIMGILPYFMVGLAPSAVAFGWYCLLFFIVNFAAQSIGYLASSFSANPVVGLSILPLFITPMILFSGMLYERNSVPPSLRWIQDISVMNYSFALMVLNQVGHIDGPARSFLIDFLQIK 638          
BLAST of EWM27919.1 vs. NCBI_GenBank
Match: gi|585102173|gb|EWM21831.1| (abc subfamily abcg [Nannochloropsis gaditana])

HSP 1 Score: 334.724 bits (857), Expect = 1.044e-101
Identity = 204/627 (32.54%), Postives = 336/627 (53.59%), Query Frame = 0
Query:   28 KLEWHVESFKVQIRRSRAPGKGTASTTTQTTKTILQKVAGCAVSGELTAILGPSGAGKTTLLECISLRNRNFDGCVQYDGQAPEGRFFTLSAFVHQADMLYGFLTPREHLTFHAIARMSGGSRTAARGLPEPGASQTSRGQSWQAEKMSSESMARRVEEVIATVKLEKCADTLIGGSDPVFNVKGISGGERKRLTIATELLQTNEIIFLDEPSSGLDSVMSESIFQTLKDLTTQGRIVIATVHCPSSKTYHLFSNLILLTCDGRLAYSGPAAQALSYFQAALGIECPQHYNPADFVLELVSAEPGVPLQEE--LRRMDALSLAYAQSFMKIQN-----PLPADD---KHKALHDVRGQGASDWVFFKLNLWRGGLQLARDRITLILWAAVSALI-GALFGVLYWQLAAS--NWRNLMGLIFSAVVGNVFTGCLGVVMRFPMEWTLVVREFSSGANAVGPYMIARFFTTLPLS-YGPVLMSSIIYWCTGMDPDAGTYLIFVLIFVSFNWSCFSLGQWISSFSANPLVAMTIMPGFVTPMIMFSGLLIERSSVPVWLAWIEDVSVVNYAFDTLMAQQMH----------ILPGNQGEVVQQFIQFNPRKMGWNVGMLWILTAAFQVLTY 630
            +L W    F + ++ ++   K + S +    K IL  VAG   SG++ A++G SGAGK+T L+C+SLRN+ F G V  +G+  + +++ ++ FV+Q D+    +T REHLTFHA+ RM+                            +  E    RVE+V+  V +  C +T+IGG  P    +GISGGE+KRL   TELL    I+F DEP+SGLDS M+  +  T+++L   G+I++  +H PSS+T+ LF++L+LL   GR+ Y+GP A   SYF ++LG+ CP  +NPADF +  +S    VP ++E  + R+ +L  AY  S +   N      +PA+    KHKA+  ++   AS W  F   + R  +Q    R T +    +++L+ G + G +Y+    +  + +N+MGL F  ++        GV+  FP E  + +RE  SGAN V  Y +AR  + LP +   P + ++I+Y    + P AG +  ++   +       S+G  ISS +++  VA  + P F+ PM +F+GLL++ +++PVWL W++  S++ Y +  L+  Q                  G  V  ++  +P+K+G  +G+L  L   F++L +
Sbjct:  122 ELAW---DFSLSVKATKREAKLSGSYS----KEILSNVAGSVKSGQMMAVMGSSGAGKSTFLDCVSLRNQQFSGNVYINGKPADEKYYFMTGFVYQEDLFIPTMTVREHLTFHAMVRMN--------------------------SDIPVEKRLERVEDVLMEVAMSHCPETIIGG--PGTGYRGISGGEKKRLAFGTELLNNPSIVFADEPTSGLDSFMTRGVCMTMRELADDGKIIMCVIHQPSSQTFDLFTHLLLL-AKGRIVYNGPMATLQSYF-SSLGVICPHFHNPADFFINQISI---VPTEQEASMARLQSLWDAYENSNLAAGNMAWKAEMPAEILNLKHKAV-SMKHFHASTWTQFYYTMKR-NIQNEFRRATDVKAKFMNSLVMGMILGTIYFGQTDTQESAKNIMGLFFLIIMFQTMVSMFGVLQAFPSECKVFIRENLSGANRVSSYFLARTLSELPSTIIYPSIFAAIVYGMADLQPTAGRFYFYIFTIILVANCATSVGYMISSMTSHEAVAYALAPLFLMPMALFAGLLLDLNTIPVWLRWLDFFSIIKYGYQLLIINQYTDRELSCVGSLFCRWKTGTAVMNYVGTSPQKVGETMGILVALIIIFRLLAF 706          
BLAST of EWM27919.1 vs. NCBI_GenBank
Match: gi|298713079|emb|CBJ48854.1| (ABC transmembrane transporter [Ectocarpus siliculosus])

HSP 1 Score: 291.582 bits (745), Expect = 9.983e-87
Identity = 195/610 (31.97%), Postives = 308/610 (50.49%), Query Frame = 0
Query:   74 LTAILGPSGAGKTTLLECISLRNRNFDGCVQYDGQAPEGRFFTLS-AFVHQADMLYGFLTPREHLTFHAIARMSGGSRTAARGLPEPGASQTSRGQSWQAEKMSSESMARRVEEVIATVKLEKCADTLIGGSDPVFNVKGISGGERKRLTIATELLQTNEIIFLDEPSSGLDSVMSESIFQTLKDLTTQGRIVIATVHCPSSKTYHLFSNLILLTCDGRLAYSGPAAQALSYFQAALGIECPQHYNPADFVLELVSAEPGVPLQEELRRMDALSLAYAQS--FMKIQNPLPADDKHKALHDVRGQGASD---------------WVFFKLNLWRGGLQLARDRITLILWAAV--------SALIGALFGVLYWQLAAS--NWRNLMGLIFSAVVGNVFTGCLGVVMRFPMEWTLVVREFSSGANAVGPYMIARFFTTLPLS-YGPVLMSSIIYWCTGMDPDAGTYLIFVLIFVSFNWSCFSLGQWISSFSANPLVAMTIMPGFVTPMIMFSGLLIERSSVPVWLAWIEDVSVVNYAFDTL------MAQQMHILPGNQ------GEVVQQFIQFN--PRKMGWNVGMLWILTAAFQVLTYVNLRVRLRAS 640
            + AI+GPSGAGKT+LL C+SLRN+++ G V ++G+ P+     ++ AFV Q D+    LTPREHL FHA  RMS   RT                       +S E   + VE  +  + L KCA+T IGG      ++GISGGE+KRL+ ATE+L    +IF+DEP+SGLDS M+E++   L+ L   GR ++AT+H PSS  + LFS+L LL  +G+  Y GP  +A ++F+ A+G  CP  YNPAD  ++++S +P     E  RR+ A +  Y QS  + + +  LP      A  +V+     D                  ++   WR  +++ +  I +     V        + ++  L G+++ QL  S  + ++ MG++F   +     G +GV+  FP E  + +RE  SGA  V  Y   R    +P+    P + S IIY   G   +A  +L+F++  V  + S  SLG  +S+F+ +  VA+ + P  + P I+F GLLI  S +PV+  W    S + Y +  +        + +   P  +      G+ V  +++F    R++  N   L  L   F++L +  L  R R +
Sbjct:    1 MLAIMGPSGAGKTSLLNCLSLRNQSYSGTVLHNGKPPDMDMVGITTAFVQQEDLFIPTLTPREHLRFHANMRMS---RT-----------------------LSPEQKMQAVETALEGLGLGKCANTPIGGQGS--TIRGISGGEKKRLSFATEVLGDAPVIFVDEPTSGLDSFMAEAVVTKLRALAESGRTIVATIHQPSSHVFSLFSHLHLL-AEGKTIYCGPLDRANAHFE-AIGHPCPNFYNPADHYIKVMSRDPS-SFDESERRITAAADGYRQSAAYTQTEANLPTAVVTAARQEVKSGDREDDGATSARAAVVKPASHKVYQATWWRQAVEVYKRTIIMYRREPVLTKARLGQTVVVAVLVGLIFLQLGNSQRDVQSTMGVLFFVAINQGILGTIGVLQVFPNEMPVFLREHDSGAYRVSSYFFGRTLAEIPIQVVFPTVFSVIIYLLCGFPLEAKPFLLFIVYIVLTSNSAISLGYVVSAFAKSVDVALAVGPMILMPFIIFGGLLINLSEIPVYFMWYSIFSFIQYGYKAISIVIWESKESLDCPPEPEPCVFPTGQDVLDYLEFEGGNRELWLNFVYLVALMVGFRILAFFALLYRSRPT 579          
BLAST of EWM27919.1 vs. NCBI_GenBank
Match: gi|971515294|dbj|GAQ82936.1| (ABC transporter G family [Klebsormidium nitens])

HSP 1 Score: 287.345 bits (734), Expect = 3.598e-84
Identity = 183/574 (31.88%), Postives = 307/574 (53.48%), Query Frame = 0
Query:   22 AVKIQHKLEWHVESFKVQIRRSRAPGKGTASTTTQTTKTILQKVAGCAVSGELTAILGPSGAGKTTLLECISLRNR---NFDGCVQYDGQAPEGRFFTLSAFVHQADMLYGFLTPREHLTFHAIARMSGGSRTAARGLPEPGASQTSRGQSWQAEKMSSESMARRVEEVIATVKLEKCADTLIGGSDPVFNVKGISGGERKRLTIATELLQTNEIIFLDEPSSGLDSVMSESIFQTLKDLTTQGRIVIATVHCPSSKTYHLFSNLILLTCDGRLAYSGPAAQALSYFQAALGIECPQHYNPADFVLELVSAEPGVPLQEELR--RMDALSLAYAQSFMKIQNPLPAD----DKHKALHDVR-GQGASDWVF-FKLNLWRGGLQLARDRITLILWAAVSALIGALFGVLYWQLAASN--WRNLMGLIFSAVVGNVFTGCLGVVMRFPMEWTLVVREFSSGANAVGPYMIARFFTTLPLSY-GPVLMSSIIYWCTGMDPDAGTYLIFVLIFVSFNWSCFSLGQWISSFSANPLVAMTIMPGFVTPMIMFSGLLIERSSVPVWLAWIEDVSVVNYAF 581
            A  ++  LEW   ++ + +++    GKG A    + TK IL+ ++G   +G   AI+GP+G+GKT+LL  ++ R +     DG +  +G+  E  F  ++A+V Q D+LY  LT +E LT  A+ R           LP                KMS +    RV+ +++ + L K  +T+IG +   F  +G+SGGERKR  IA E+L    +IFLDEP+SGLDS  + ++  +L  L  +GR +I+T+H P S  Y LF +L+LL+ +G + Y GPA+QA++YF +  G+ CPQH+NPADF ++ +S +   P +E+    R+  L   + ++  ++  P  AD    D  K L D   G+ AS W+  F++ LWR  +Q +RDR+ L++    S ++  + G L+  +       +N  G+IF   +   F G   ++  FP+E  ++ RE ++ A  V  +  A+     PL     ++  +++YW  G   DAG +  ++LI +    +   +G  +S+ +  P VA+ + P      ++F G  I  +S+PV L WI ++S + +AF
Sbjct:   54 AQTVRVSLEWRQLNYSIVVKK----GKGKAEEG-KVTKRILKNLSGTVRAGTFVAIMGPTGSGKTSLLNALAGRLQRVGTLDGEILVNGKPRENTFKRITAYVMQDDVLYSSLTVQETLTTAALLR-----------LPS---------------KMSPQKKMERVDSIVSELGLGKARNTIIGNA---FR-RGVSGGERKRANIAVEMLSNPSMIFLDEPTSGLDSFQALNVMSSLGALADKGRTIISTIHQPRSSIYALFEDLLLLS-EGEMIYFGPASQAVAYFDSK-GLTCPQHFNPADFFMDKISLDSRDPEREKESTGRVKMLQAEWQKNLPEV-TPAGADVTKGDLSKGLEDSSLGKYASSWILQFRVLLWRAFIQTSRDRLPLMIALVQSIVMSCIVGALFSTVGNDQKALQNRTGVIFFTTIFVAFNGVFQMITTFPVERAVIARERAANAYRVSAFYPAKVIAEWPLRVIATIIFVTVVYWIVGFQHDAGKFFRYLLIGIWEFTAMNGVGLLVSAIAPTPPVALALGPLVTVICMLFGGFYINLNSIPVALRWISNLSPIKWAF 589          
The following BLAST results are available for this feature:
BLAST of EWM27919.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585110259|gb|EWM27919.1|0.000e+0100.00abc subfamily abcg [Nannochloropsis gaditana][more]
gi|553189117|ref|XP_005854935.1|0.000e+099.53atp-binding cassette [Nannochloropsis gaditana CCM... [more]
gi|585106190|gb|EWM24668.1|0.000e+056.33abc subfamily abcg [Nannochloropsis gaditana][more]
gi|585108726|gb|EWM26638.1|0.000e+053.07abc subfamily abcg [Nannochloropsis gaditana][more]
gi|585109266|gb|EWM27089.1|8.243e-15441.52abc subfamily abcg [Nannochloropsis gaditana][more]
gi|585109183|gb|EWM27013.1|3.660e-13738.90white [Nannochloropsis gaditana][more]
gi|585106124|gb|EWM24607.1|2.946e-12136.53abc subfamily abcg [Nannochloropsis gaditana][more]
gi|585102173|gb|EWM21831.1|1.044e-10132.54abc subfamily abcg [Nannochloropsis gaditana][more]
gi|298713079|emb|CBJ48854.1|9.983e-8731.97ABC transmembrane transporter [Ectocarpus siliculo... [more]
gi|971515294|dbj|GAQ82936.1|3.598e-8431.88ABC transporter G family [Klebsormidium nitens][more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2758rna2758Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications