EWM28020.1, cds2737 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28020.1 vs. NCBI_GenBank
Match: gi|585110361|gb|EWM28020.1| (ferredoxin-fold anticodon-binding domain-containing protein 1 [Nannochloropsis gaditana]) HSP 1 Score: 1058.9 bits (2737), Expect = 0.000e+0 Identity = 514/514 (100.00%), Postives = 514/514 (100.00%), Query Frame = 0
Query: 1 MWLAAILSAQKRVSYRGLQLAAATLCLLSGQARRDRLCLFSCAFSTSPSQSPSPPAIPACHPTTFTGQSVRTILVVGDGDFSFSAALLPWLPPNVKLVTTCLQRDEDDLIQRYPAAARNLQMLREQKSGKGSLGNAIGFGLDVMSSTFIASALAHITAPEDLNSPSRWQKIQKIETRSSQNGKDLSYSFNDLALPGKISSKYDRVIFNFPHVPGKSNIKMNRALLSAFLSKSAHILQNPGGEVLLALCRGQSGVEARDKRAYKASWRLPGFAADAGLAIYSNEAFPVRDTRYVKGMYQPSGHRDGGKSSYVYDGKDPKLYTLLRPFPSSSASGPSFLHRKAIYGPVYAHEVHLWISPWLQMKSHSEVASLLKIAIGKCLGPEDARLVAKVTYTESYLSPTPSHQPKNRNSGFSSSELEEEKVDFALQESRAFEVQYAWREGGALTRDRADELRQRVEDGLKQLSSGRCSSERKDMHDTAGQGQRSLVGEILLHKAGLPVGDVTPLAAPTVFQAL 514
MWLAAILSAQKRVSYRGLQLAAATLCLLSGQARRDRLCLFSCAFSTSPSQSPSPPAIPACHPTTFTGQSVRTILVVGDGDFSFSAALLPWLPPNVKLVTTCLQRDEDDLIQRYPAAARNLQMLREQKSGKGSLGNAIGFGLDVMSSTFIASALAHITAPEDLNSPSRWQKIQKIETRSSQNGKDLSYSFNDLALPGKISSKYDRVIFNFPHVPGKSNIKMNRALLSAFLSKSAHILQNPGGEVLLALCRGQSGVEARDKRAYKASWRLPGFAADAGLAIYSNEAFPVRDTRYVKGMYQPSGHRDGGKSSYVYDGKDPKLYTLLRPFPSSSASGPSFLHRKAIYGPVYAHEVHLWISPWLQMKSHSEVASLLKIAIGKCLGPEDARLVAKVTYTESYLSPTPSHQPKNRNSGFSSSELEEEKVDFALQESRAFEVQYAWREGGALTRDRADELRQRVEDGLKQLSSGRCSSERKDMHDTAGQGQRSLVGEILLHKAGLPVGDVTPLAAPTVFQAL
Sbjct: 1 MWLAAILSAQKRVSYRGLQLAAATLCLLSGQARRDRLCLFSCAFSTSPSQSPSPPAIPACHPTTFTGQSVRTILVVGDGDFSFSAALLPWLPPNVKLVTTCLQRDEDDLIQRYPAAARNLQMLREQKSGKGSLGNAIGFGLDVMSSTFIASALAHITAPEDLNSPSRWQKIQKIETRSSQNGKDLSYSFNDLALPGKISSKYDRVIFNFPHVPGKSNIKMNRALLSAFLSKSAHILQNPGGEVLLALCRGQSGVEARDKRAYKASWRLPGFAADAGLAIYSNEAFPVRDTRYVKGMYQPSGHRDGGKSSYVYDGKDPKLYTLLRPFPSSSASGPSFLHRKAIYGPVYAHEVHLWISPWLQMKSHSEVASLLKIAIGKCLGPEDARLVAKVTYTESYLSPTPSHQPKNRNSGFSSSELEEEKVDFALQESRAFEVQYAWREGGALTRDRADELRQRVEDGLKQLSSGRCSSERKDMHDTAGQGQRSLVGEILLHKAGLPVGDVTPLAAPTVFQAL 514
BLAST of EWM28020.1 vs. NCBI_GenBank
Match: gi|533125893|ref|XP_005378145.1| (PREDICTED: ferredoxin-fold anticodon-binding domain-containing protein 1 [Chinchilla lanigera]) HSP 1 Score: 101.293 bits (251), Expect = 5.630e-19 Identity = 81/265 (30.57%), Postives = 117/265 (44.15%), Query Frame = 0
Query: 71 RTILVVGDGDFSFSAALLPWLPPNVKLVTTCLQRDEDDLIQRYPAAARNLQMLREQKSGKGSLGNAIGFGLDVMSSTFIASALAHITAPEDLNSPSRWQKIQKIETRSSQNGKDLSYSFNDLALPGKISSKYDRVIFNFPHVPGKSNIKMNRALLSAFLSKSAHILQNPGGEVLLALCRGQSGVEA-RDKRAYKASWRLPGFAADAGLAI-----YSNEAFPVRDTRYVKGMYQPSGHRDGGKSSYVYDGKDPKLYTLLRPFPSS 329
R +L+VG+G+FSF+AAL + P L TCLQ D + R P A NL+ LRE+ G + FG+D + LA+ P + K+DR+ FNFPH K+ + NR LL+ F A +L GEV +ALCRGQ G A + +R + SW++ AA GL + +S EA P Y+ +G+R KS ++ +G ++T PF S
Sbjct: 4 RRLLLVGEGNFSFAAALSETMDPRSSLTATCLQHPAD--LARDPVAQENLRRLRER-------GTEVRFGVD-------CTQLANAFEPHN--------------------------------------RKFDRIYFNFPHCGRKAGVAKNRELLAKFFQSCADVLSEE-GEVHVALCRGQGGTPADKPQREWHNSWQVVAMAAQGGLILSDVLPFSCEAVP---------GYKCTGYRSQDKSFHI-EGALNHIFTQSLPFEGS 203
BLAST of EWM28020.1 vs. NCBI_GenBank
Match: gi|507565659|ref|XP_004666482.1| (PREDICTED: ferredoxin-fold anticodon-binding domain-containing protein 1 [Jaculus jaculus]) HSP 1 Score: 100.523 bits (249), Expect = 1.025e-18 Identity = 76/242 (31.40%), Postives = 108/242 (44.63%), Query Frame = 0
Query: 71 RTILVVGDGDFSFSAALLPWLPPNVKLVTTCLQRDEDDLIQRYPAAARNLQMLREQKSGKGSLGNAIGFGLDVMSSTFIASALAHITAPEDLNSPSRWQKIQKIETRSSQNGKDLSYSFNDLALPGKISSKYDRVIFNFPHVPGKSNIKMNRALLSAFLSKSAHILQNPGGEVLLALCRGQSGVEARD-KRAYKASWRLPGFAADAGLAIYSNEAFPVRDTRYVKGMYQPSGHRDGGKSSYV 311
R +L+VG+G+FSF+AAL L P+ L TCLQ D + R P A NL LR + G + FG+D + LAH P D ++DR+ FNFPH K+ + NR LL+ F + +L GEV +ALCRGQ G A + +R ++ SW++ AA GL + F D + G Y+ +G+R KS +V
Sbjct: 4 RRLLLVGEGNFSFAAALSDTLDPSTSLTATCLQHPTD--LARDPVAQENLLRLRTR-------GAVVRFGVD-------CTQLAHAFGPHD--------------------------------------RQFDRIYFNFPHCGRKAGVAKNRELLAKFFQSCSDVLAKE-GEVHVALCRGQGGTPADNPQREWQNSWQVVAMAAQGGLILSDVHLF---DCEAMPG-YKCTGYRSQDKSFHV 186
BLAST of EWM28020.1 vs. NCBI_GenBank
Match: gi|507624448|ref|XP_004626167.1| (PREDICTED: ferredoxin-fold anticodon-binding domain-containing protein 1 [Octodon degus]) HSP 1 Score: 97.8265 bits (242), Expect = 5.784e-18 Identity = 81/265 (30.57%), Postives = 116/265 (43.77%), Query Frame = 0
Query: 71 RTILVVGDGDFSFSAALLPWLPPNVKLVTTCLQRDEDDLIQRYPAAARNLQMLREQKSGKGSLGNAIGFGLDVMSSTFIASALAHITAPEDLNSPSRWQKIQKIETRSSQNGKDLSYSFNDLALPGKISSKYDRVIFNFPHVPGKSNIKMNRALLSAFLSKSAHILQNPGGEVLLALCRGQSGVEA-RDKRAYKASWRLPGFAADAGLAI-----YSNEAFPVRDTRYVKGMYQPSGHRDGGKSSYVYDGKDPKLYTLLRPFPSS 329
R +L+VG+G+FSF+AAL P + TCLQ D + R P A NLQ LR++ G + FG+D + LA+ P + K+DR+ FNFPH K+ + NR LL+ F A +L GEV +ALCRGQ G A + +R + SW++ AA GL + +S EA P Y+ +G+R KS +V +G ++T PF S
Sbjct: 4 RRLLLVGEGNFSFAAALSETTDPRSSITATCLQHPAD--LARDPVARENLQRLRKR-------GAEVRFGVD-------CTQLANAFEPHN--------------------------------------RKFDRIYFNFPHCGRKAGVAKNRELLAKFFQSCADVLAEE-GEVHVALCRGQGGTPADKPQREWHNSWQVVAMAAQGGLILSDVLPFSCEAVP---------GYKCTGYRSQDKSFHV-EGALNHIFTQSLPFDGS 203
BLAST of EWM28020.1 vs. NCBI_GenBank
Match: gi|984108033|ref|XP_015345383.1| (PREDICTED: ferredoxin-fold anticodon-binding domain-containing protein 1 [Marmota marmota marmota]) HSP 1 Score: 97.8265 bits (242), Expect = 6.200e-18 Identity = 81/260 (31.15%), Postives = 118/260 (45.38%), Query Frame = 0
Query: 71 RTILVVGDGDFSFSAALLPWLPPNVKLVTTCLQRDEDDLIQRYPAAARNLQMLREQKSGKGSLGNAIGFGLDVMSSTFIASALAHITAPEDLNSPSRWQKIQKIETRSSQNGKDLSYSFNDLALPGKISSKYDRVIFNFPHVPGKSNIKMNRALLSAFLSKSAHILQNPGGEVLLALCRGQSGVEA-RDKRAYKASWRLPGFAADAGLAIYSNEAFPVRDTRYVKGMYQPSGHRDGGKSSYVYDGKDPKLYTLLRPFPSS 329
R +L+VG+G+FSF+AAL L +V L TCLQ + + R P A NLQ LRE+ G I F +D + LA+ P+D ++DR+ FNFPH K+ + NR LL+ F +L GEV +ALCRGQ G A + +R + SW++ AA GL + ++ P R V G Y+ +G+R KS ++ +G ++T PF S
Sbjct: 4 RRLLLVGEGNFSFAAALSETLDSSVCLTATCLQHPAE--LARDPVARENLQRLRER-------GTEIRFCVD-------CTQLANAFEPQD--------------------------------------REFDRIYFNFPHCGRKAGVAKNRKLLAKFFQSCVDVLAEE-GEVHVALCRGQGGTSADKPQREWHNSWQVVAMAALGGLIL--SDVLPFR-CEAVPG-YKCTGYRSQDKSFHI-EGALNHIFTRSLPFEGS 203
BLAST of EWM28020.1 vs. NCBI_GenBank
Match: gi|532097275|ref|XP_005334293.1| (alpha-1,2-mannosyltransferase ALG9 isoform X5 [Ictidomys tridecemlineatus]) HSP 1 Score: 97.0561 bits (240), Expect = 1.099e-17 Identity = 104/377 (27.59%), Postives = 160/377 (42.44%), Query Frame = 0
Query: 71 RTILVVGDGDFSFSAALLPWLPPNVKLVTTCLQRDEDDLIQRYPAAARNLQMLREQKSGKGSLGNAIGFGLDVMSSTFIASALAHITAPEDLNSPSRWQKIQKIETRSSQNGKDLSYSFNDLALPGKISSKYDRVIFNFPHVPGKSNIKMNRALLSAFLSKSAHILQNPGGEVLLALCRGQSGVEA-RDKRAYKASWRLPGFAADAGLAIYSNEAFPVRDTRYVKGMYQPSGHRDGGKSSYV-------------YDGKDPKLYTLLRPFPSSSASGPSFLHRKAIYGPVYAHEVHLWISPWLQMKSHSEVASLLKIAIGKC---LGPEDARLVAKVTYTESYLSPTPSHQPKNRNSGFSSSELEEEKVDFALQESR 430
R +L+VG+G+FSF+AAL L V L TCLQ + + R P A NLQ LRE+ G I FG+D T +A+A +++ R ++DR+ FNFPH K+ + NR LL+ F +L GEV +ALCRGQ G A + +R + SW++ AA GL + ++ P R V G Y+ +G+R KS ++ ++G P+++++ S S P L K G + A H + K E+ + + KC L P + V +S S + N +S F + E+ +E DF + S+
Sbjct: 4 RRLLLVGEGNFSFAAALSETLDSGVCLTATCLQHPAE--LARDPVARENLQRLRER-------GTEIRFGVDC---TQLANAF-------------------ELQDR-----------------------EFDRIYFNFPHCGRKAGVAKNRKLLAKFFQSCVDVLAEE-GEVHVALCRGQGGTSADKPQREWHNSWQVVAMAALGGLIL--SDVLPFR-CEAVPG-YKCTGYRSQDKSFHIEGALNHIFTRSLPFEGSQPRVFSIKLGDQGFSFSEPKALAGKLNRGFLEASSCH--PIKIINEKLIVEMGKIFPLKRLKCSLPLLPLEGTSVLPSWNCDSMSSFWINLHEDNSDSEFLNGEITKEMEDFLVSFSQ 319
BLAST of EWM28020.1 vs. NCBI_GenBank
Match: gi|731280349|ref|XP_010608985.1| (PREDICTED: ferredoxin-fold anticodon-binding domain-containing protein 1 isoform X2 [Fukomys damarensis] >gi|676264259|gb|KFO20733.1| Ferredoxin-fold anticodon-binding domain-containing protein 1 [Fukomys damarensis]) HSP 1 Score: 96.6709 bits (239), Expect = 1.628e-17 Identity = 83/265 (31.32%), Postives = 118/265 (44.53%), Query Frame = 0
Query: 71 RTILVVGDGDFSFSAALLPWLPPNVKLVTTCLQRDEDDLIQRYPAAARNLQMLREQKSGKGSLGNAIGFGLDVMSSTFIASALAHITAPEDLNSPSRWQKIQKIETRSSQNGKDLSYSFNDLALPGKISSKYDRVIFNFPHVPGKSNIKMNRALLSAFLSKSAHILQNPGGEVLLALCRGQSGVEA-RDKRAYKASWRLPGFAADAGLAI-----YSNEAFPVRDTRYVKGMYQPSGHRDGGKSSYVYDGKDPKLYTLLRPFPSS 329
R +L+VG+G+FSF+AAL + P+ L TCLQ + R P A NL+ LRE+ G I FG+D + LA+ P P+R K+DR+ FNFPH K+ + NR LL+ F A +L GEV +ALCRGQ G A + +R + SW++ AA G + +S EA P Y+ +G+R KS +V +G ++T PF S
Sbjct: 4 RRLLLVGEGNFSFAAALSETIDPSSSLTATCLQNAAH--LARDPVAQENLRRLRER-------GTEIRFGVD-------CTQLANAFEP-----PNR---------------------------------KFDRIYFNFPHCGRKAGVAKNRELLAKFFQSCADVLAGE-GEVHVALCRGQGGTPADKPQREWHNSWQVVAMAALGGFILSDVIPFSCEAVP---------GYKCTGYRSQDKSFHV-EGALNHIFTESLPFEGS 203
BLAST of EWM28020.1 vs. NCBI_GenBank
Match: gi|1214250317|ref|XP_021588079.1| (alpha-1,2-mannosyltransferase ALG9 isoform X3 [Ictidomys tridecemlineatus]) HSP 1 Score: 94.7449 bits (234), Expect = 9.193e-17 Identity = 81/260 (31.15%), Postives = 117/260 (45.00%), Query Frame = 0
Query: 71 RTILVVGDGDFSFSAALLPWLPPNVKLVTTCLQRDEDDLIQRYPAAARNLQMLREQKSGKGSLGNAIGFGLDVMSSTFIASALAHITAPEDLNSPSRWQKIQKIETRSSQNGKDLSYSFNDLALPGKISSKYDRVIFNFPHVPGKSNIKMNRALLSAFLSKSAHILQNPGGEVLLALCRGQSGVEA-RDKRAYKASWRLPGFAADAGLAIYSNEAFPVRDTRYVKGMYQPSGHRDGGKSSYVYDGKDPKLYTLLRPFPSS 329
R +L+VG+G+FSF+AAL L V L TCLQ + + R P A NLQ LRE+ G I FG+D + LA+ +D ++DR+ FNFPH K+ + NR LL+ F +L GEV +ALCRGQ G A + +R + SW++ AA GL + ++ P R V G Y+ +G+R KS ++ +G ++T PF S
Sbjct: 4 RRLLLVGEGNFSFAAALSETLDSGVCLTATCLQHPAE--LARDPVARENLQRLRER-------GTEIRFGVD-------CTQLANAFELQD--------------------------------------REFDRIYFNFPHCGRKAGVAKNRKLLAKFFQSCVDVLAEE-GEVHVALCRGQGGTSADKPQREWHNSWQVVAMAALGGLIL--SDVLPFR-CEAVPG-YKCTGYRSQDKSFHI-EGALNHIFTRSLPFEGS 203
BLAST of EWM28020.1 vs. NCBI_GenBank
Match: gi|1111181492|ref|XP_019324743.1| (PREDICTED: ferredoxin-fold anticodon-binding domain-containing protein 1 [Panthera pardus]) HSP 1 Score: 93.5893 bits (231), Expect = 1.403e-16 Identity = 81/265 (30.57%), Postives = 116/265 (43.77%), Query Frame = 0
Query: 71 RTILVVGDGDFSFSAALLPWLPPNVKLVTTCLQRDEDDLIQRYPAAARNLQMLREQKSGKGSLGNAIGFGLDVMSSTFIASALAHITAPEDLNSPSRWQKIQKIETRSSQNGKDLSYSFNDLALPGKISSKYDRVIFNFPHVPGKSNIKMNRALLSAFLSKSAHILQNPGGEVLLALCRGQSGVEA-RDKRAYKASWRLPGFAADAGLAI-----YSNEAFPVRDTRYVKGMYQPSGHRDGGKSSYVYDGKDPKLYTLLRPFPSS 329
R +L+VG+G+FSF+AAL L + + TCLQR D + P A NLQ LRE+ G + FG+D T +A A ++ R ++DR+ FNFPH K+ + NR LL+ F +L P GEV +ALCRGQ G A + R + SW++ AA G + +S EA P Y+ +G+R KS +V +G ++T PF S
Sbjct: 4 RRLLLVGEGNFSFAAALSETLEDSTSVTATCLQRPAD--LAGDPVAQENLQRLRER-------GTEVRFGVDC---TQLADAF-------------------ELHHR-----------------------EFDRIYFNFPHCGRKAGVAKNRELLAKFFQSCKDVLA-PEGEVYVALCRGQGGTPADKPTREWHNSWQVVAMAALGGFILSDVHPFSCEAVP---------GYKCTGYRSQDKSFHV-EGALNHIFTQSLPFEDS 203
BLAST of EWM28020.1 vs. NCBI_GenBank
Match: gi|591295436|ref|XP_007074924.1| (PREDICTED: ferredoxin-fold anticodon-binding domain-containing protein 1 isoform X1 [Panthera tigris altaica]) HSP 1 Score: 93.5893 bits (231), Expect = 1.428e-16 Identity = 81/265 (30.57%), Postives = 116/265 (43.77%), Query Frame = 0
Query: 71 RTILVVGDGDFSFSAALLPWLPPNVKLVTTCLQRDEDDLIQRYPAAARNLQMLREQKSGKGSLGNAIGFGLDVMSSTFIASALAHITAPEDLNSPSRWQKIQKIETRSSQNGKDLSYSFNDLALPGKISSKYDRVIFNFPHVPGKSNIKMNRALLSAFLSKSAHILQNPGGEVLLALCRGQSGVEA-RDKRAYKASWRLPGFAADAGLAI-----YSNEAFPVRDTRYVKGMYQPSGHRDGGKSSYVYDGKDPKLYTLLRPFPSS 329
R +L+VG+G+FSF+AAL L + + TCLQR D + P A NLQ LRE+ G + FG+D T +A A ++ R ++DR+ FNFPH K+ + NR LL+ F +L P GEV +ALCRGQ G A + R + SW++ AA G + +S EA P Y+ +G+R KS +V +G ++T PF S
Sbjct: 4 RRLLLVGEGNFSFAAALSETLEDSTSVTATCLQRPAD--LAGDPVAQENLQRLRER-------GTEVRFGVDC---TQLADAF-------------------ELHHR-----------------------EFDRIYFNFPHCGRKAGVAKNRELLAKFFQSCKDVLA-PEGEVYVALCRGQGGTPADKPTREWHNSWQVVAMAALGGFILSDVHPFSCEAVP---------GYKCTGYRSQDKSFHV-EGALNHIFTQSLPFEDS 203 The following BLAST results are available for this feature:
BLAST of EWM28020.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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