EWM28019.1, cds2734 (CDS) Nannochloropsis gaditana

Overview
NameEWM28019.1
Unique Namecds2734
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002459.1:1099403..1099499 +
Alignment locationCM002459.1:1099542..1099833 +
Alignment locationCM002459.1:1099876..1099972 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM28019.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100008g118.7911.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:1099403..1099499 +
CM002459.1supercontigCM002459.1:1099542..1099833 +
CM002459.1supercontigCM002459.1:1099876..1099972 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM28019.1 vs. NCBI_GenBank
Match: gi|585110360|gb|EWM28019.1| (hypothetical protein Naga_100008g118 [Nannochloropsis gaditana])

HSP 1 Score: 335.109 bits (858), Expect = 1.789e-116
Identity = 161/161 (100.00%), Postives = 161/161 (100.00%), Query Frame = 0 
Query:    1 MCRVCGPSVVIPTKMESDVAWWSRPGHSFLIFCVLEDTNALDPPLCLIASFDASEKACKILQAANKRKPYEADAKVHLTEGPSKSEWIYVRKGEAKIQVVSQQHLYLSQESATSFKTIRNAAFCSSLVKKRKCACKDMLNRCEVGDKNITRALFSFLFPRV 161
            MCRVCGPSVVIPTKMESDVAWWSRPGHSFLIFCVLEDTNALDPPLCLIASFDASEKACKILQAANKRKPYEADAKVHLTEGPSKSEWIYVRKGEAKIQVVSQQHLYLSQESATSFKTIRNAAFCSSLVKKRKCACKDMLNRCEVGDKNITRALFSFLFPRV
Sbjct:    1 MCRVCGPSVVIPTKMESDVAWWSRPGHSFLIFCVLEDTNALDPPLCLIASFDASEKACKILQAANKRKPYEADAKVHLTEGPSKSEWIYVRKGEAKIQVVSQQHLYLSQESATSFKTIRNAAFCSSLVKKRKCACKDMLNRCEVGDKNITRALFSFLFPRV 161
The following BLAST results are available for this feature:
BLAST of EWM28019.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585110360|gb|EWM28019.1|1.789e-116100.00hypothetical protein Naga_100008g118 [Nannochlorop... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2742rna2742Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications