EWM27933.1, cds2720 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27933.1 vs. NCBI_GenBank
Match: gi|585110274|gb|EWM27933.1| (hypothetical protein Naga_100008g101 [Nannochloropsis gaditana]) HSP 1 Score: 486.493 bits (1251), Expect = 4.671e-174 Identity = 234/234 (100.00%), Postives = 234/234 (100.00%), Query Frame = 0
Query: 1 MILANAALRQSSFALSRSSPVRSRLIIPFRGLAKGSPTQVAAEETREANAGYGIQIVSGRHTLYSDLMPEAGGNDKGPSPKEYALVALSSCTLMTVRMYSDSMIKSGKWPGKSIEKLSVSCSEHGDDQHVPLNIQVELKLRSNLDEEQIKRLVAAAEKCPVKRMMKGGVKNGITTVLVIRKEGSTAGCEKYSGHDKDTFDSTYFYPIFVIRYSMAETPFFLIFTLFVYLVDMIL 234
MILANAALRQSSFALSRSSPVRSRLIIPFRGLAKGSPTQVAAEETREANAGYGIQIVSGRHTLYSDLMPEAGGNDKGPSPKEYALVALSSCTLMTVRMYSDSMIKSGKWPGKSIEKLSVSCSEHGDDQHVPLNIQVELKLRSNLDEEQIKRLVAAAEKCPVKRMMKGGVKNGITTVLVIRKEGSTAGCEKYSGHDKDTFDSTYFYPIFVIRYSMAETPFFLIFTLFVYLVDMIL
Sbjct: 1 MILANAALRQSSFALSRSSPVRSRLIIPFRGLAKGSPTQVAAEETREANAGYGIQIVSGRHTLYSDLMPEAGGNDKGPSPKEYALVALSSCTLMTVRMYSDSMIKSGKWPGKSIEKLSVSCSEHGDDQHVPLNIQVELKLRSNLDEEQIKRLVAAAEKCPVKRMMKGGVKNGITTVLVIRKEGSTAGCEKYSGHDKDTFDSTYFYPIFVIRYSMAETPFFLIFTLFVYLVDMIL 234
BLAST of EWM27933.1 vs. NCBI_GenBank
Match: gi|971515070|dbj|GAQ83154.1| (hypothetical protein KFL_001370240 [Klebsormidium nitens]) HSP 1 Score: 103.219 bits (256), Expect = 3.780e-24 Identity = 64/154 (41.56%), Postives = 85/154 (55.19%), Query Frame = 0
Query: 29 FRGLAKGSPTQVAAEETREANAGYGIQIVSGRHTLYSDLMPEAGGNDKGPSPKEYALVALSSCTLMTVRMYSDSMIKSGKWPGKSIEKLSVSCSEHGD-DQHVPLNIQVELKLRS-NLDEEQIKRLVAAAEKCPVKRMMKGGVKNGITTVLVIR 180
R ++ GSP V EE + + Y I SGRH L DL PE+GG D+GPSPKE + L CT MT+RMY+D KWP +E+++V E HVP + V + L L Q RL ++CPVKRM+KG + GI++VL R
Sbjct: 4 VRCMSAGSPEHVTVEEDPD-DVRYHHTIRSGRHVLKGDLAPESGGTDEGPSPKELLMSGLGLCTSMTIRMYADRK----KWP---LERVNVEVREFTKPGAHVPEELLVTVHLTGPQLTYAQRARLHEIGDRCPVKRMIKGEMPKGISSVLAGR 149
BLAST of EWM27933.1 vs. NCBI_GenBank
Match: gi|647288349|ref|WP_025733138.1| (hypothetical protein [Carnimonas nigrificans]) HSP 1 Score: 88.1965 bits (217), Expect = 1.402e-18 Identity = 45/121 (37.19%), Postives = 77/121 (63.64%), Query Frame = 0
Query: 52 YGIQIVSGRHTLYSDLMPEAGGNDKGPSPKEYALVALSSCTLMTVRMYSDSMIKSGKWPGKSIEKLSVSCSEHGDDQHVPLNIQVELKLRSNLDEEQIKRLVAAAEKCPVKRMMKGGVKNG 172
+ + + S H +D+ P++GG D P+P+ Y L AL +CT MTVRMY++ +WP + ++ ++VS ++H D QHV +++ + L+ L+++Q +RL+ AEKCPV R++ G V G
Sbjct: 15 WQVALHSDSHQWQADVDPQSGGGDLAPNPESYLLGALGACTAMTVRMYAERK----QWPLQGVD-VTVSIAQH-DKQHV--HLERHISLQGELNDQQRQRLLEIAEKCPVHRLLTGEVTIG 127
BLAST of EWM27933.1 vs. NCBI_GenBank
Match: gi|654828955|ref|WP_028281714.1| (osmotically inducible protein C [Olleya marilimosa]) HSP 1 Score: 90.8929 bits (224), Expect = 9.963e-18 Identity = 47/131 (35.88%), Postives = 76/131 (58.02%), Query Frame = 0
Query: 47 EANAGYGIQIVSGRHTLYSDLMPEAGGNDKGPSPKEYALVALSSCTLMTVRMYSDSMIKSGKWPGKSIE------KLSVSCSEHGDDQHVPLN-IQVELKLRSNLDEEQIKRLVAAAEKCPVKRMMKGGVK 170
+A G+ Q+ G HT+ +D GGND GPSP E LS+CT MTV+MY +K W ++IE K++ E+G+ + + ++ E+KL+ NLDE+QI+R++ A+KCPV + + ++
Sbjct: 271 DAEDGFTTQMTVGNHTMMADEPTSYGGNDFGPSPYELVSAGLSACTAMTVQMY----VKRKGWDLQNIEVHTSHTKVTKQAIENGEQKEIKVDTFNREIKLKGNLDEKQIQRMLQIADKCPVHKTLHSAIE 397
BLAST of EWM27933.1 vs. NCBI_GenBank
Match: gi|1097364304|emb|SFJ20459.1| (putative redox protein [Olleya namhaensis]) HSP 1 Score: 90.1225 bits (222), Expect = 1.913e-17 Identity = 46/130 (35.38%), Postives = 76/130 (58.46%), Query Frame = 0
Query: 47 EANAGYGIQIVSGRHTLYSDLMPEAGGNDKGPSPKEYALVALSSCTLMTVRMYSDSMIKSGKWPGKSIE------KLSVSCSEHGDDQHVPLN-IQVELKLRSNLDEEQIKRLVAAAEKCPVKRMMKGGV 169
+A G+ Q+ G HT+ +D GGND GPSP E+ LS+CT MTV+MY +K W ++IE K++ E+G+ + + ++ E+KL+ NLD++QI+R++ A+KCPV + + +
Sbjct: 271 DAEDGFTTQMTVGSHTMMADEPTSFGGNDFGPSPYEFVSAGLSACTAMTVQMY----VKRKGWDLQNIEVHTSHTKVAKQIVENGEQKEIKVDTFNREIKLKGNLDDKQIQRILQIADKCPVHKTLHSDI 396
BLAST of EWM27933.1 vs. NCBI_GenBank
Match: gi|943607595|ref|WP_055437594.1| (osmotically inducible protein C [Lacinutrix algicola]) HSP 1 Score: 89.7373 bits (221), Expect = 3.291e-17 Identity = 46/130 (35.38%), Postives = 75/130 (57.69%), Query Frame = 0
Query: 47 EANAGYGIQIVSGRHTLYSDLMPEAGGNDKGPSPKEYALVALSSCTLMTVRMYSDSMIKSGKWPGKSIE------KLSVSCSEHGDDQHVPLN-IQVELKLRSNLDEEQIKRLVAAAEKCPVKRMMKGGV 169
+A G+ Q+ G HT+ +D GGND GPSP E LS+CT MTV+MY +K W ++IE K++ E+G+ + + ++ ++KL+ NLDE+QI+R++ A+KCPV + + +
Sbjct: 271 DAEDGFTTQMTVGNHTMMADEPTSYGGNDFGPSPYELVSAGLSACTAMTVQMY----VKRKSWDLQNIEVHTSHTKVAKQVVENGEQKEIKVDTFNRDIKLKGNLDEKQIQRILQIADKCPVHKTLHSDI 396
BLAST of EWM27933.1 vs. NCBI_GenBank
Match: gi|521062759|ref|WP_020394710.1| (hypothetical protein [Thiothrix disciformis]) HSP 1 Score: 82.4185 bits (202), Expect = 2.038e-16 Identity = 50/128 (39.06%), Postives = 70/128 (54.69%), Query Frame = 0
Query: 51 GYGIQIVSGRHTLYSDLMPEAGGNDKGPSPKEYALVALSSCTLMTVRMYSDSMIKSGKWPGKSIEKLSVSCSEHGDDQHVPLNIQVELKLRSNLDEEQIKRLVAAAEKCPVKRMMKGGVKNGITTVLV 178
GY I +G H L +D GGND GP+P +Y AL +CT MT++MY++ KWP +E VS H D + + ++KL NLDEEQ +RL+ A++CPV + + G I T LV
Sbjct: 19 GYSCTIQAGNHQLIADEPIPLGGNDAGPAPYQYLKAALGACTAMTIKMYAERK----KWP---LENAIVSL-RHSRDANKNSVFERDIKLLGNLDEEQRQRLLDIADRCPVHKTLSQGA--SILTKLV 136
BLAST of EWM27933.1 vs. NCBI_GenBank
Match: gi|1188376667|ref|WP_085497935.1| (osmotically inducible protein C [Arenibacter troitsensis] >gi|1183561886|emb|SMG25465.1| putative redox protein [Arenibacter troitsensis]) HSP 1 Score: 86.6557 bits (213), Expect = 4.295e-16 Identity = 54/154 (35.06%), Postives = 82/154 (53.25%), Query Frame = 0
Query: 37 PTQVAAEETREANA------GYGIQIVSGRHTLYSDLMPEAGGNDKGPSPKEYALVALSSCTLMTVRMYSDSMIKSGKWPGKSIEKLSVSCSEHGDD-------QHVPLNIQVELKLRSNLDEEQIKRLVAAAEKCPVKRMMKGGVKNGITTVL 177
P+ +A E +E A G+ Q+ G H + +D GGN+ GPSP E LS+CT+MTV+MY +K KWP +++E + H DD + Q +KL +LD++QI R++ A+KCPV R +K + N +TT+L
Sbjct: 255 PSAIALETEKEVVASLDSADGFTTQMKVGSHYITADEPVSYGGNNFGPSPYELVSAGLSACTVMTVQMY----VKRKKWPLENVEVHTSYQKLHADDCQNCDSSESKIDTFQRAIKLTGDLDDKQIARIMEIADKCPVHRTLKSEI-NIVTTLL 403
BLAST of EWM27933.1 vs. NCBI_GenBank
Match: gi|1194602296|ref|WP_085937541.1| (osmotically inducible protein C [Enhydrobacter aerosaccus] >gi|1152236951|emb|SKA35756.1| putative redox protein [Enhydrobacter aerosaccus]) HSP 1 Score: 81.2629 bits (199), Expect = 5.503e-16 Identity = 42/119 (35.29%), Postives = 66/119 (55.46%), Query Frame = 0
Query: 52 YGIQIVSGRHTLYSDLMPEAGGNDKGPSPKEYALVALSSCTLMTVRMYSDSMIKSGKWPGKSIEKLSVSCSEHGDDQHVPLNIQVELKLRSNLDEEQIKRLVAAAEKCPVKRMMKGGVK 170
Y I +G H L +D PE GG D GP+P + + AL +CT++T+RMY++ KWP +++ V GD Q + +++E LD+EQ KR+ AE+ PV +K G++
Sbjct: 13 YATSITTGHHRLTADEGPELGGKDTGPAPYDLLIAALGACTVITLRMYAERK----KWPVEAVHA-DVHFVRDGDSQRIDRTLRIE----GALDDEQRKRMADIAERTPVTLTLKRGLE 122
BLAST of EWM27933.1 vs. NCBI_GenBank
Match: gi|503393031|ref|WP_013627692.1| (OsmC family protein [Rubinisphaera brasiliensis] >gi|324968183|gb|ADY58961.1| OsmC family protein [Rubinisphaera brasiliensis DSM 5305]) HSP 1 Score: 81.2629 bits (199), Expect = 6.579e-16 Identity = 47/127 (37.01%), Postives = 72/127 (56.69%), Query Frame = 0
Query: 47 EANAGYGIQIVSGRHTLYSDLMPEAGGNDKGPSPKEYALVALSSCTLMTVRMYSDSMIKSGKWPGKSIEKLSVSCSE---HGDDQHVPLNIQVELKLRSNLDEEQIKRLVAAAEKCPVKRMMKGGVK 170
+ N GY +I + HT ++D E G D GP+P E L ++ SCT +T+RMY+ + WP +E+L V + + D + V L IQ E+++ L EQ KRL+ A++CPV RM+ G +K
Sbjct: 11 DHNEGYAQEIQARDHTFWADEPTELEGLDSGPTPVEMLLASIGSCTTITMRMYA----RRKGWP---LEQLRVHITHEKVNRDGEEVDL-IQKEIEMTGELSNEQRKRLLEIADRCPVHRMITGNLK 129 The following BLAST results are available for this feature:
BLAST of EWM27933.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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