EWM27933.1, cds2720 (CDS) Nannochloropsis gaditana

Overview
NameEWM27933.1
Unique Namecds2720
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002459.1:1055151..1055681 +
Alignment locationCM002459.1:1055738..1055911 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM27933.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100008g101.7825.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:1055151..1055681 +
CM002459.1supercontigCM002459.1:1055738..1055911 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0006950response to stress
GO:0006979response to oxidative stress
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR015946KH_dom-like_a/b
IPR003718OsmC/Ohr_fam
Homology
BLAST of EWM27933.1 vs. NCBI_GenBank
Match: gi|585110274|gb|EWM27933.1| (hypothetical protein Naga_100008g101 [Nannochloropsis gaditana])

HSP 1 Score: 486.493 bits (1251), Expect = 4.671e-174
Identity = 234/234 (100.00%), Postives = 234/234 (100.00%), Query Frame = 0
Query:    1 MILANAALRQSSFALSRSSPVRSRLIIPFRGLAKGSPTQVAAEETREANAGYGIQIVSGRHTLYSDLMPEAGGNDKGPSPKEYALVALSSCTLMTVRMYSDSMIKSGKWPGKSIEKLSVSCSEHGDDQHVPLNIQVELKLRSNLDEEQIKRLVAAAEKCPVKRMMKGGVKNGITTVLVIRKEGSTAGCEKYSGHDKDTFDSTYFYPIFVIRYSMAETPFFLIFTLFVYLVDMIL 234
            MILANAALRQSSFALSRSSPVRSRLIIPFRGLAKGSPTQVAAEETREANAGYGIQIVSGRHTLYSDLMPEAGGNDKGPSPKEYALVALSSCTLMTVRMYSDSMIKSGKWPGKSIEKLSVSCSEHGDDQHVPLNIQVELKLRSNLDEEQIKRLVAAAEKCPVKRMMKGGVKNGITTVLVIRKEGSTAGCEKYSGHDKDTFDSTYFYPIFVIRYSMAETPFFLIFTLFVYLVDMIL
Sbjct:    1 MILANAALRQSSFALSRSSPVRSRLIIPFRGLAKGSPTQVAAEETREANAGYGIQIVSGRHTLYSDLMPEAGGNDKGPSPKEYALVALSSCTLMTVRMYSDSMIKSGKWPGKSIEKLSVSCSEHGDDQHVPLNIQVELKLRSNLDEEQIKRLVAAAEKCPVKRMMKGGVKNGITTVLVIRKEGSTAGCEKYSGHDKDTFDSTYFYPIFVIRYSMAETPFFLIFTLFVYLVDMIL 234          
BLAST of EWM27933.1 vs. NCBI_GenBank
Match: gi|971515070|dbj|GAQ83154.1| (hypothetical protein KFL_001370240 [Klebsormidium nitens])

HSP 1 Score: 103.219 bits (256), Expect = 3.780e-24
Identity = 64/154 (41.56%), Postives = 85/154 (55.19%), Query Frame = 0
Query:   29 FRGLAKGSPTQVAAEETREANAGYGIQIVSGRHTLYSDLMPEAGGNDKGPSPKEYALVALSSCTLMTVRMYSDSMIKSGKWPGKSIEKLSVSCSEHGD-DQHVPLNIQVELKLRS-NLDEEQIKRLVAAAEKCPVKRMMKGGVKNGITTVLVIR 180
             R ++ GSP  V  EE  + +  Y   I SGRH L  DL PE+GG D+GPSPKE  +  L  CT MT+RMY+D      KWP   +E+++V   E      HVP  + V + L    L   Q  RL    ++CPVKRM+KG +  GI++VL  R
Sbjct:    4 VRCMSAGSPEHVTVEEDPD-DVRYHHTIRSGRHVLKGDLAPESGGTDEGPSPKELLMSGLGLCTSMTIRMYADRK----KWP---LERVNVEVREFTKPGAHVPEELLVTVHLTGPQLTYAQRARLHEIGDRCPVKRMIKGEMPKGISSVLAGR 149          
BLAST of EWM27933.1 vs. NCBI_GenBank
Match: gi|647288349|ref|WP_025733138.1| (hypothetical protein [Carnimonas nigrificans])

HSP 1 Score: 88.1965 bits (217), Expect = 1.402e-18
Identity = 45/121 (37.19%), Postives = 77/121 (63.64%), Query Frame = 0
Query:   52 YGIQIVSGRHTLYSDLMPEAGGNDKGPSPKEYALVALSSCTLMTVRMYSDSMIKSGKWPGKSIEKLSVSCSEHGDDQHVPLNIQVELKLRSNLDEEQIKRLVAAAEKCPVKRMMKGGVKNG 172
            + + + S  H   +D+ P++GG D  P+P+ Y L AL +CT MTVRMY++      +WP + ++ ++VS ++H D QHV  +++  + L+  L+++Q +RL+  AEKCPV R++ G V  G
Sbjct:   15 WQVALHSDSHQWQADVDPQSGGGDLAPNPESYLLGALGACTAMTVRMYAERK----QWPLQGVD-VTVSIAQH-DKQHV--HLERHISLQGELNDQQRQRLLEIAEKCPVHRLLTGEVTIG 127          
BLAST of EWM27933.1 vs. NCBI_GenBank
Match: gi|654828955|ref|WP_028281714.1| (osmotically inducible protein C [Olleya marilimosa])

HSP 1 Score: 90.8929 bits (224), Expect = 9.963e-18
Identity = 47/131 (35.88%), Postives = 76/131 (58.02%), Query Frame = 0
Query:   47 EANAGYGIQIVSGRHTLYSDLMPEAGGNDKGPSPKEYALVALSSCTLMTVRMYSDSMIKSGKWPGKSIE------KLSVSCSEHGDDQHVPLN-IQVELKLRSNLDEEQIKRLVAAAEKCPVKRMMKGGVK 170
            +A  G+  Q+  G HT+ +D     GGND GPSP E     LS+CT MTV+MY    +K   W  ++IE      K++    E+G+ + + ++    E+KL+ NLDE+QI+R++  A+KCPV + +   ++
Sbjct:  271 DAEDGFTTQMTVGNHTMMADEPTSYGGNDFGPSPYELVSAGLSACTAMTVQMY----VKRKGWDLQNIEVHTSHTKVTKQAIENGEQKEIKVDTFNREIKLKGNLDEKQIQRMLQIADKCPVHKTLHSAIE 397          
BLAST of EWM27933.1 vs. NCBI_GenBank
Match: gi|1097364304|emb|SFJ20459.1| (putative redox protein [Olleya namhaensis])

HSP 1 Score: 90.1225 bits (222), Expect = 1.913e-17
Identity = 46/130 (35.38%), Postives = 76/130 (58.46%), Query Frame = 0
Query:   47 EANAGYGIQIVSGRHTLYSDLMPEAGGNDKGPSPKEYALVALSSCTLMTVRMYSDSMIKSGKWPGKSIE------KLSVSCSEHGDDQHVPLN-IQVELKLRSNLDEEQIKRLVAAAEKCPVKRMMKGGV 169
            +A  G+  Q+  G HT+ +D     GGND GPSP E+    LS+CT MTV+MY    +K   W  ++IE      K++    E+G+ + + ++    E+KL+ NLD++QI+R++  A+KCPV + +   +
Sbjct:  271 DAEDGFTTQMTVGSHTMMADEPTSFGGNDFGPSPYEFVSAGLSACTAMTVQMY----VKRKGWDLQNIEVHTSHTKVAKQIVENGEQKEIKVDTFNREIKLKGNLDDKQIQRILQIADKCPVHKTLHSDI 396          
BLAST of EWM27933.1 vs. NCBI_GenBank
Match: gi|943607595|ref|WP_055437594.1| (osmotically inducible protein C [Lacinutrix algicola])

HSP 1 Score: 89.7373 bits (221), Expect = 3.291e-17
Identity = 46/130 (35.38%), Postives = 75/130 (57.69%), Query Frame = 0
Query:   47 EANAGYGIQIVSGRHTLYSDLMPEAGGNDKGPSPKEYALVALSSCTLMTVRMYSDSMIKSGKWPGKSIE------KLSVSCSEHGDDQHVPLN-IQVELKLRSNLDEEQIKRLVAAAEKCPVKRMMKGGV 169
            +A  G+  Q+  G HT+ +D     GGND GPSP E     LS+CT MTV+MY    +K   W  ++IE      K++    E+G+ + + ++    ++KL+ NLDE+QI+R++  A+KCPV + +   +
Sbjct:  271 DAEDGFTTQMTVGNHTMMADEPTSYGGNDFGPSPYELVSAGLSACTAMTVQMY----VKRKSWDLQNIEVHTSHTKVAKQVVENGEQKEIKVDTFNRDIKLKGNLDEKQIQRILQIADKCPVHKTLHSDI 396          
BLAST of EWM27933.1 vs. NCBI_GenBank
Match: gi|521062759|ref|WP_020394710.1| (hypothetical protein [Thiothrix disciformis])

HSP 1 Score: 82.4185 bits (202), Expect = 2.038e-16
Identity = 50/128 (39.06%), Postives = 70/128 (54.69%), Query Frame = 0
Query:   51 GYGIQIVSGRHTLYSDLMPEAGGNDKGPSPKEYALVALSSCTLMTVRMYSDSMIKSGKWPGKSIEKLSVSCSEHGDDQHVPLNIQVELKLRSNLDEEQIKRLVAAAEKCPVKRMMKGGVKNGITTVLV 178
            GY   I +G H L +D     GGND GP+P +Y   AL +CT MT++MY++      KWP   +E   VS   H  D +     + ++KL  NLDEEQ +RL+  A++CPV + +  G    I T LV
Sbjct:   19 GYSCTIQAGNHQLIADEPIPLGGNDAGPAPYQYLKAALGACTAMTIKMYAERK----KWP---LENAIVSL-RHSRDANKNSVFERDIKLLGNLDEEQRQRLLDIADRCPVHKTLSQGA--SILTKLV 136          
BLAST of EWM27933.1 vs. NCBI_GenBank
Match: gi|1188376667|ref|WP_085497935.1| (osmotically inducible protein C [Arenibacter troitsensis] >gi|1183561886|emb|SMG25465.1| putative redox protein [Arenibacter troitsensis])

HSP 1 Score: 86.6557 bits (213), Expect = 4.295e-16
Identity = 54/154 (35.06%), Postives = 82/154 (53.25%), Query Frame = 0
Query:   37 PTQVAAEETREANA------GYGIQIVSGRHTLYSDLMPEAGGNDKGPSPKEYALVALSSCTLMTVRMYSDSMIKSGKWPGKSIEKLSVSCSEHGDD-------QHVPLNIQVELKLRSNLDEEQIKRLVAAAEKCPVKRMMKGGVKNGITTVL 177
            P+ +A E  +E  A      G+  Q+  G H + +D     GGN+ GPSP E     LS+CT+MTV+MY    +K  KWP +++E  +     H DD       +      Q  +KL  +LD++QI R++  A+KCPV R +K  + N +TT+L
Sbjct:  255 PSAIALETEKEVVASLDSADGFTTQMKVGSHYITADEPVSYGGNNFGPSPYELVSAGLSACTVMTVQMY----VKRKKWPLENVEVHTSYQKLHADDCQNCDSSESKIDTFQRAIKLTGDLDDKQIARIMEIADKCPVHRTLKSEI-NIVTTLL 403          
BLAST of EWM27933.1 vs. NCBI_GenBank
Match: gi|1194602296|ref|WP_085937541.1| (osmotically inducible protein C [Enhydrobacter aerosaccus] >gi|1152236951|emb|SKA35756.1| putative redox protein [Enhydrobacter aerosaccus])

HSP 1 Score: 81.2629 bits (199), Expect = 5.503e-16
Identity = 42/119 (35.29%), Postives = 66/119 (55.46%), Query Frame = 0
Query:   52 YGIQIVSGRHTLYSDLMPEAGGNDKGPSPKEYALVALSSCTLMTVRMYSDSMIKSGKWPGKSIEKLSVSCSEHGDDQHVPLNIQVELKLRSNLDEEQIKRLVAAAEKCPVKRMMKGGVK 170
            Y   I +G H L +D  PE GG D GP+P +  + AL +CT++T+RMY++      KWP +++    V     GD Q +   +++E      LD+EQ KR+   AE+ PV   +K G++
Sbjct:   13 YATSITTGHHRLTADEGPELGGKDTGPAPYDLLIAALGACTVITLRMYAERK----KWPVEAVHA-DVHFVRDGDSQRIDRTLRIE----GALDDEQRKRMADIAERTPVTLTLKRGLE 122          
BLAST of EWM27933.1 vs. NCBI_GenBank
Match: gi|503393031|ref|WP_013627692.1| (OsmC family protein [Rubinisphaera brasiliensis] >gi|324968183|gb|ADY58961.1| OsmC family protein [Rubinisphaera brasiliensis DSM 5305])

HSP 1 Score: 81.2629 bits (199), Expect = 6.579e-16
Identity = 47/127 (37.01%), Postives = 72/127 (56.69%), Query Frame = 0
Query:   47 EANAGYGIQIVSGRHTLYSDLMPEAGGNDKGPSPKEYALVALSSCTLMTVRMYSDSMIKSGKWPGKSIEKLSVSCSE---HGDDQHVPLNIQVELKLRSNLDEEQIKRLVAAAEKCPVKRMMKGGVK 170
            + N GY  +I +  HT ++D   E  G D GP+P E  L ++ SCT +T+RMY+    +   WP   +E+L V  +    + D + V L IQ E+++   L  EQ KRL+  A++CPV RM+ G +K
Sbjct:   11 DHNEGYAQEIQARDHTFWADEPTELEGLDSGPTPVEMLLASIGSCTTITMRMYA----RRKGWP---LEQLRVHITHEKVNRDGEEVDL-IQKEIEMTGELSNEQRKRLLEIADRCPVHRMITGNLK 129          
The following BLAST results are available for this feature:
BLAST of EWM27933.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585110274|gb|EWM27933.1|4.671e-174100.00hypothetical protein Naga_100008g101 [Nannochlorop... [more]
gi|971515070|dbj|GAQ83154.1|3.780e-2441.56hypothetical protein KFL_001370240 [Klebsormidium ... [more]
gi|647288349|ref|WP_025733138.1|1.402e-1837.19hypothetical protein [Carnimonas nigrificans][more]
gi|654828955|ref|WP_028281714.1|9.963e-1835.88osmotically inducible protein C [Olleya marilimosa... [more]
gi|1097364304|emb|SFJ20459.1|1.913e-1735.38putative redox protein [Olleya namhaensis][more]
gi|943607595|ref|WP_055437594.1|3.291e-1735.38osmotically inducible protein C [Lacinutrix algico... [more]
gi|521062759|ref|WP_020394710.1|2.038e-1639.06hypothetical protein [Thiothrix disciformis][more]
gi|1188376667|ref|WP_085497935.1|4.295e-1635.06osmotically inducible protein C [Arenibacter troit... [more]
gi|1194602296|ref|WP_085937541.1|5.503e-1635.29osmotically inducible protein C [Enhydrobacter aer... [more]
gi|503393031|ref|WP_013627692.1|6.579e-1637.01OsmC family protein [Rubinisphaera brasiliensis] >... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2728rna2728Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications