EWM27968.1, cds2717 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27968.1 vs. NCBI_GenBank
Match: gi|585110309|gb|EWM27968.1| (nudix hydrolase 3 [Nannochloropsis gaditana]) HSP 1 Score: 527.324 bits (1357), Expect = 0.000e+0 Identity = 258/258 (100.00%), Postives = 258/258 (100.00%), Query Frame = 0
Query: 1 MITNYTLPALAAGLRDREETLQFCARLLEDGNLEQLERVLHPYQAELITRRRRKTRSLDLAGGLTSKHLNMLRKYLQRSPRQLTRAVSLRASVVIPLCNVNGVASVLFERRSPFVRSFKSQVCFPGGMVEESLDVNIIETSLREMEEEIGFPARSVDVLGVLRCDWSEVHKITGIGVTPVVGFLGDLTEKELSPNPKEVAECFTIPLATLLDVEHWNREEEKGTVVFVGGPHVIWGLTAHLLDIFLKDILMRYKVQVQ 258
MITNYTLPALAAGLRDREETLQFCARLLEDGNLEQLERVLHPYQAELITRRRRKTRSLDLAGGLTSKHLNMLRKYLQRSPRQLTRAVSLRASVVIPLCNVNGVASVLFERRSPFVRSFKSQVCFPGGMVEESLDVNIIETSLREMEEEIGFPARSVDVLGVLRCDWSEVHKITGIGVTPVVGFLGDLTEKELSPNPKEVAECFTIPLATLLDVEHWNREEEKGTVVFVGGPHVIWGLTAHLLDIFLKDILMRYKVQVQ
Sbjct: 1 MITNYTLPALAAGLRDREETLQFCARLLEDGNLEQLERVLHPYQAELITRRRRKTRSLDLAGGLTSKHLNMLRKYLQRSPRQLTRAVSLRASVVIPLCNVNGVASVLFERRSPFVRSFKSQVCFPGGMVEESLDVNIIETSLREMEEEIGFPARSVDVLGVLRCDWSEVHKITGIGVTPVVGFLGDLTEKELSPNPKEVAECFTIPLATLLDVEHWNREEEKGTVVFVGGPHVIWGLTAHLLDIFLKDILMRYKVQVQ 258
BLAST of EWM27968.1 vs. NCBI_GenBank
Match: gi|553187702|ref|XP_005854662.1| (nudix hydrolase 3 [Nannochloropsis gaditana CCMP526] >gi|422294396|gb|EKU21696.1| nudix hydrolase 3 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 525.783 bits (1353), Expect = 0.000e+0 Identity = 257/258 (99.61%), Postives = 258/258 (100.00%), Query Frame = 0
Query: 1 MITNYTLPALAAGLRDREETLQFCARLLEDGNLEQLERVLHPYQAELITRRRRKTRSLDLAGGLTSKHLNMLRKYLQRSPRQLTRAVSLRASVVIPLCNVNGVASVLFERRSPFVRSFKSQVCFPGGMVEESLDVNIIETSLREMEEEIGFPARSVDVLGVLRCDWSEVHKITGIGVTPVVGFLGDLTEKELSPNPKEVAECFTIPLATLLDVEHWNREEEKGTVVFVGGPHVIWGLTAHLLDIFLKDILMRYKVQVQ 258
MITNYTLPALAAGLRDREETLQFCARLLEDGNLEQL+RVLHPYQAELITRRRRKTRSLDLAGGLTSKHLNMLRKYLQRSPRQLTRAVSLRASVVIPLCNVNGVASVLFERRSPFVRSFKSQVCFPGGMVEESLDVNIIETSLREMEEEIGFPARSVDVLGVLRCDWSEVHKITGIGVTPVVGFLGDLTEKELSPNPKEVAECFTIPLATLLDVEHWNREEEKGTVVFVGGPHVIWGLTAHLLDIFLKDILMRYKVQVQ
Sbjct: 1 MITNYTLPALAAGLRDREETLQFCARLLEDGNLEQLKRVLHPYQAELITRRRRKTRSLDLAGGLTSKHLNMLRKYLQRSPRQLTRAVSLRASVVIPLCNVNGVASVLFERRSPFVRSFKSQVCFPGGMVEESLDVNIIETSLREMEEEIGFPARSVDVLGVLRCDWSEVHKITGIGVTPVVGFLGDLTEKELSPNPKEVAECFTIPLATLLDVEHWNREEEKGTVVFVGGPHVIWGLTAHLLDIFLKDILMRYKVQVQ 258
BLAST of EWM27968.1 vs. NCBI_GenBank
Match: gi|298709248|emb|CBJ31187.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 266.929 bits (681), Expect = 8.210e-83 Identity = 132/254 (51.97%), Postives = 177/254 (69.69%), Query Frame = 0
Query: 1 MITNYTLPALAAGLRDREETLQFCARLLEDGNLEQLERVLHPYQAELITRRRRKTRSLDL-AGGLTSKHLNMLRKYLQRSPRQLTRAVSLRASVVIPLCNVNGVASVLFERRSPFVRSFKSQVCFPGGMVEESLDVNIIETSLREMEEEIGFPARSVDVLGVLRCDWSEVHKITGIGVTPVVGFLGDLTEKELSPNPKEVAECFTIPLATLLDVEHWNREEEKGTVVFVGGPHVIWGLTAHLLDIFLKDILMRY 253
++ ++T PALAA LRDRE L CA LLE G+L + RVL P+ A+ + RR LDL G T H+ LRK LQR PR +T RASV++PLCNV+GVASVLF +RS +R++K+ VCFPGG V+ D +IIET++REM EEIG SVDVLGVLRCDWSEV + G+ VTPVVGFLG+L+++++ PNP EV+ CFTIP+ LL+ + W + ++ FVGGP+ IWGLT ++L + D+L ++
Sbjct: 295 LVESFTAPALAAALRDRETALHMCAHLLEQGDLSGVRRVLLPFTAKQVAESRRALGRLDLEPEGFTKTHMYALRKVLQRLPRHVTTLTEQRASVMVPLCNVDGVASVLFTKRSGNMRAYKNDVCFPGGKVDIGQDQHIIETAVREMGEEIGILESSVDVLGVLRCDWSEVASLIGVAVTPVVGFLGNLSQEQIHPNPDEVSHCFTIPVRFLLEEDRW-QVDKYAAPAFVGGPYQIWGLTGYILHRLVNDVLRQH 547
BLAST of EWM27968.1 vs. NCBI_GenBank
Match: gi|695438243|ref|XP_009532415.1| (hypothetical protein PHYSODRAFT_515572 [Phytophthora sojae] >gi|348672262|gb|EGZ12082.1| hypothetical protein PHYSODRAFT_515572 [Phytophthora sojae]) HSP 1 Score: 253.062 bits (645), Expect = 5.519e-81 Identity = 131/250 (52.40%), Postives = 165/250 (66.00%), Query Frame = 0
Query: 1 MITNYTLPALAAGLRDREETLQFCARLLEDGNLEQLERVLHPYQAELITRRRRKTRSLDLAGGLTSKHLNMLRKYLQRSPRQLTRAVSLRASVVIPLCNVNGVASVLFERRSPFVRSFKSQVCFPGGMVEESLDVNIIETSLREMEEEIGFPARSVDVLGVLRCDWSEVHKITGIGVTPVVGFLGDLTEKELSPNPKEVAECFTIPLATLLDVEHWNREEEKGTVVFVGGPHVIWGLTAHLLDIFLKDIL 250
++ NYT PALAA +DRE TL CA LL +G L++LE VL PY + RS LA +HL +RK L R PRQ+T+A S RA+VVIPLC G SVLF RS V K +VCFPGGMV+ + D I T LREM EE+G + VDVLGVLRCDWS V ITGI VTPVVGF+G+++++ ++ N +EV FT+PL L++ ++W R T VF GGPHVIWGLTA+LLDI L ++L
Sbjct: 6 LVNNYTAPALAAAYQDREYTLWLCAELLSEGKLDELEAVLKPYH-DFAQHDMNAQRSTPLAKAFGQRHLERIRKRLSRLPRQITKAYSARAAVVIPLCTFEGEPSVLFTLRSLTVGKHKGEVCFPGGMVDPT-DSCIEGTCLREMNEEVGLAPQGVDVLGVLRCDWSSVTSITGIAVTPVVGFIGEMSDQTVAINEQEVESLFTVPLRDLMNQDNWVR-HSNATPVFTGGPHVIWGLTAYLLDICLSEVL 252
BLAST of EWM27968.1 vs. NCBI_GenBank
Match: gi|301102392|ref|XP_002900283.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262102024|gb|EEY60076.1| conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 250.751 bits (639), Expect = 4.626e-80 Identity = 131/250 (52.40%), Postives = 161/250 (64.40%), Query Frame = 0
Query: 1 MITNYTLPALAAGLRDREETLQFCARLLEDGNLEQLERVLHPYQAELITRRRRKTRSLDLAGGLTSKHLNMLRKYLQRSPRQLTRAVSLRASVVIPLCNVNGVASVLFERRSPFVRSFKSQVCFPGGMVEESLDVNIIETSLREMEEEIGFPARSVDVLGVLRCDWSEVHKITGIGVTPVVGFLGDLTEKELSPNPKEVAECFTIPLATLLDVEHWNREEEKGTVVFVGGPHVIWGLTAHLLDIFLKDIL 250
++ NYT PALAA +DRE TL CA LL +G L++LE VL PY + R LA +HL +RK L R PRQ+T+A S RA+VVIPLC G SVLF RS V K +VCFPGGMV+ D I T LREM EE+G VDVLGVLRCDWS V ITGI VTPVVGF+G+++++ ++ N EV FT+P+ L++ ++W R T VF GGPHVIWGLTA+LLDI L DIL
Sbjct: 6 LVNNYTAPALAAAYQDREYTLWLCAELLSEGKLDELEAVLKPYH-DFAQHDMNTLRQTPLANAFGKRHLERIRKRLSRLPRQITKAYSARAAVVIPLCTFEGEPSVLFTLRSLTVGKHKGEVCFPGGMVDPD-DSCIEGTCLREMNEEVGLAPEGVDVLGVLRCDWSSVTSITGIAVTPVVGFIGEMSDRTVAINEDEVESLFTVPVRDLMNQDNWIR-HSNATPVFTGGPHVIWGLTAYLLDICLSDIL 252
BLAST of EWM27968.1 vs. NCBI_GenBank
Match: gi|970662556|gb|KUF99933.1| (hypothetical protein AM588_10009239 [Phytophthora nicotianae]) HSP 1 Score: 247.669 bits (631), Expect = 1.583e-78 Identity = 129/250 (51.60%), Postives = 162/250 (64.80%), Query Frame = 0
Query: 1 MITNYTLPALAAGLRDREETLQFCARLLEDGNLEQLERVLHPYQAELITRRRRKTRSLDLAGGLTSKHLNMLRKYLQRSPRQLTRAVSLRASVVIPLCNVNGVASVLFERRSPFVRSFKSQVCFPGGMVEESLDVNIIETSLREMEEEIGFPARSVDVLGVLRCDWSEVHKITGIGVTPVVGFLGDLTEKELSPNPKEVAECFTIPLATLLDVEHWNREEEKGTVVFVGGPHVIWGLTAHLLDIFLKDIL 250
++ NYT PALAA +DRE TL CA LL +G L++LE VL PY + R LA + +HL +RK L R PRQ+T+A S RA+VVIPLC SVLF RS V K +VCFPGGMV+ + D I T LREM EE+G VDVLGVLRCDWS V ITGI VTPVVGF+G+++++ ++ N EV FT+PL L++ ++W R T VF GGPHVIWGLTA+LLDI L ++L
Sbjct: 38 LVNNYTAPALAAAYQDREYTLWLCAELLSEGKLDELEAVLKPYH-DFAQHDINAQRRTPLANAFSKRHLERIRKRLSRLPRQITKAYSARAAVVIPLCTFESEPSVLFTLRSLTVGKHKGEVCFPGGMVDPN-DSCIEGTCLREMNEEVGLAPEGVDVLGVLRCDWSSVTSITGIAVTPVVGFIGEMSDRTVAINEDEVESLFTVPLRDLMNQDNWIR-HSNATPVFTGGPHVIWGLTAYLLDICLSEVL 284
BLAST of EWM27968.1 vs. NCBI_GenBank
Match: gi|566010191|gb|ETI33102.1| (hypothetical protein F443_20211 [Phytophthora parasitica P1569] >gi|568005817|gb|ETL80097.1| hypothetical protein L917_19399 [Phytophthora parasitica] >gi|568035715|gb|ETM33347.1| hypothetical protein L914_19429 [Phytophthora parasitica] >gi|570967977|gb|ETP31096.1| hypothetical protein F442_20030 [Phytophthora parasitica P10297]) HSP 1 Score: 248.44 bits (633), Expect = 8.391e-78 Identity = 129/250 (51.60%), Postives = 162/250 (64.80%), Query Frame = 0
Query: 1 MITNYTLPALAAGLRDREETLQFCARLLEDGNLEQLERVLHPYQAELITRRRRKTRSLDLAGGLTSKHLNMLRKYLQRSPRQLTRAVSLRASVVIPLCNVNGVASVLFERRSPFVRSFKSQVCFPGGMVEESLDVNIIETSLREMEEEIGFPARSVDVLGVLRCDWSEVHKITGIGVTPVVGFLGDLTEKELSPNPKEVAECFTIPLATLLDVEHWNREEEKGTVVFVGGPHVIWGLTAHLLDIFLKDIL 250
++ NYT PALAA +DRE TL CA LL +G L++LE VL PY + R LA + +HL +RK L R PRQ+T+A S RA+VVIPLC SVLF RS V K +VCFPGGMV+ + D I T LREM EE+G VDVLGVLRCDWS V ITGI VTPVVGF+G+++++ ++ N EV FT+PL L++ ++W R T VF GGPHVIWGLTA+LLDI L ++L
Sbjct: 110 LVNNYTAPALAAAYQDREYTLWLCAELLSEGKLDELEAVLKPYH-DFAQHDINAQRRTPLANAFSKRHLERIRKRLSRLPRQITKAYSARAAVVIPLCTFESEPSVLFTLRSLTVGKHKGEVCFPGGMVDPN-DSCIEGTCLREMNEEVGLAPEGVDVLGVLRCDWSSVTSITGIAVTPVVGFIGEMSDRTVAINEDEVESLFTVPLRDLMNQDNWIR-HSNATPVFTGGPHVIWGLTAYLLDICLSEVL 356
BLAST of EWM27968.1 vs. NCBI_GenBank
Match: gi|567947655|gb|ETK73431.1| (hypothetical protein L915_19658 [Phytophthora parasitica]) HSP 1 Score: 248.44 bits (633), Expect = 9.152e-78 Identity = 129/250 (51.60%), Postives = 162/250 (64.80%), Query Frame = 0
Query: 1 MITNYTLPALAAGLRDREETLQFCARLLEDGNLEQLERVLHPYQAELITRRRRKTRSLDLAGGLTSKHLNMLRKYLQRSPRQLTRAVSLRASVVIPLCNVNGVASVLFERRSPFVRSFKSQVCFPGGMVEESLDVNIIETSLREMEEEIGFPARSVDVLGVLRCDWSEVHKITGIGVTPVVGFLGDLTEKELSPNPKEVAECFTIPLATLLDVEHWNREEEKGTVVFVGGPHVIWGLTAHLLDIFLKDIL 250
++ NYT PALAA +DRE TL CA LL +G L++LE VL PY + R LA + +HL +RK L R PRQ+T+A S RA+VVIPLC SVLF RS V K +VCFPGGMV+ + D I T LREM EE+G VDVLGVLRCDWS V ITGI VTPVVGF+G+++++ ++ N EV FT+PL L++ ++W R T VF GGPHVIWGLTA+LLDI L ++L
Sbjct: 110 LVNNYTAPALAAAYQDREYTLWLCAELLSEGKLDELEAVLKPYH-DFAQHDINAQRRTPLANAFSKRHLERIRKRLSRLPRQITKAYSARAAVVIPLCTFESEPSVLFTLRSLTVGKHKGEVCFPGGMVDPN-DSCIEGTCLREMNEEVGLAPEGVDVLGVLRCDWSSVTSITGIAVTPVVGFIGEMSDRTVAINEDEVESLFTVPLRDLMNQDNWIR-HSNATPVFTGGPHVIWGLTAYLLDICLSEVL 356
BLAST of EWM27968.1 vs. NCBI_GenBank
Match: gi|567976334|gb|ETL26861.1| (hypothetical protein L916_19546 [Phytophthora parasitica] >gi|570937654|gb|ETP02911.1| hypothetical protein F441_20091 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 248.054 bits (632), Expect = 1.009e-77 Identity = 129/250 (51.60%), Postives = 162/250 (64.80%), Query Frame = 0
Query: 1 MITNYTLPALAAGLRDREETLQFCARLLEDGNLEQLERVLHPYQAELITRRRRKTRSLDLAGGLTSKHLNMLRKYLQRSPRQLTRAVSLRASVVIPLCNVNGVASVLFERRSPFVRSFKSQVCFPGGMVEESLDVNIIETSLREMEEEIGFPARSVDVLGVLRCDWSEVHKITGIGVTPVVGFLGDLTEKELSPNPKEVAECFTIPLATLLDVEHWNREEEKGTVVFVGGPHVIWGLTAHLLDIFLKDIL 250
++ NYT PALAA +DRE TL CA LL +G L++LE VL PY + R LA + +HL +RK L R PRQ+T+A S RA+VVIPLC SVLF RS V K +VCFPGGMV+ + D I T LREM EE+G VDVLGVLRCDWS V ITGI VTPVVGF+G+++++ ++ N EV FT+PL L++ ++W R T VF GGPHVIWGLTA+LLDI L ++L
Sbjct: 110 LVNNYTAPALAAAYQDREYTLWLCAELLSEGKLDELEAVLKPYH-DFAQHDINAQRRTPLANAFSKRHLERIRKRLSRLPRQITKAYSARAAVVIPLCTFESEPSVLFTLRSLTVGKHKGEVCFPGGMVDPN-DSCIEGTCLREMNEEVGLAPEGVDVLGVLRCDWSSVTSITGIAVTPVVGFIGEMSDRTVAINEDEVESLFTVPLRDLMNQDNWIR-HSNATPVFTGGPHVIWGLTAYLLDICLSEVL 356
BLAST of EWM27968.1 vs. NCBI_GenBank
Match: gi|675210833|ref|XP_008914301.1| (hypothetical protein PPTG_18137 [Phytophthora parasitica INRA-310] >gi|568085556|gb|ETN00461.1| hypothetical protein PPTG_18137 [Phytophthora parasitica INRA-310] >gi|570313888|gb|ETO61836.1| hypothetical protein F444_20226 [Phytophthora parasitica P1976]) HSP 1 Score: 247.669 bits (631), Expect = 1.367e-77 Identity = 129/250 (51.60%), Postives = 162/250 (64.80%), Query Frame = 0
Query: 1 MITNYTLPALAAGLRDREETLQFCARLLEDGNLEQLERVLHPYQAELITRRRRKTRSLDLAGGLTSKHLNMLRKYLQRSPRQLTRAVSLRASVVIPLCNVNGVASVLFERRSPFVRSFKSQVCFPGGMVEESLDVNIIETSLREMEEEIGFPARSVDVLGVLRCDWSEVHKITGIGVTPVVGFLGDLTEKELSPNPKEVAECFTIPLATLLDVEHWNREEEKGTVVFVGGPHVIWGLTAHLLDIFLKDIL 250
++ NYT PALAA +DRE TL CA LL +G L++LE VL PY + R LA + +HL +RK L R PRQ+T+A S RA+VVIPLC SVLF RS V K +VCFPGGMV+ + D I T LREM EE+G VDVLGVLRCDWS V ITGI VTPVVGF+G+++++ ++ N EV FT+PL L++ ++W R T VF GGPHVIWGLTA+LLDI L ++L
Sbjct: 110 LVNNYTAPALAAAYQDREYTLWLCAELLSEGKLDELEAVLKPYH-DFAQHDINAQRRTPLANAFSKRHLERIRKRLSRLPRQITKAYSARAAVVIPLCTFESEPSVLFTLRSLTVGKHKGEVCFPGGMVDPN-DSCIEGTCLREMNEEVGLAPEGVDVLGVLRCDWSSVTSITGIAVTPVVGFIGEMSDRTVAINEDEVESLFTVPLRDLMNQDNWIR-HSNATPVFTGGPHVIWGLTAYLLDICLSEVL 356 The following BLAST results are available for this feature:
BLAST of EWM27968.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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