EWM27968.1, cds2717 (CDS) Nannochloropsis gaditana

Overview
NameEWM27968.1
Unique Namecds2717
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002459.1:1051261..1052037 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM27968.1
Productnudix hydrolase 3
Orig transcript idgnl|cribi|Naga_100008g98.7860.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:1051261..1052037 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
Vocabulary: INTERPRO
TermDefinition
IPR000086NUDIX_hydrolase_dom
IPR015797NUDIX_hydrolase_dom-like
Homology
BLAST of EWM27968.1 vs. NCBI_GenBank
Match: gi|585110309|gb|EWM27968.1| (nudix hydrolase 3 [Nannochloropsis gaditana])

HSP 1 Score: 527.324 bits (1357), Expect = 0.000e+0
Identity = 258/258 (100.00%), Postives = 258/258 (100.00%), Query Frame = 0
Query:    1 MITNYTLPALAAGLRDREETLQFCARLLEDGNLEQLERVLHPYQAELITRRRRKTRSLDLAGGLTSKHLNMLRKYLQRSPRQLTRAVSLRASVVIPLCNVNGVASVLFERRSPFVRSFKSQVCFPGGMVEESLDVNIIETSLREMEEEIGFPARSVDVLGVLRCDWSEVHKITGIGVTPVVGFLGDLTEKELSPNPKEVAECFTIPLATLLDVEHWNREEEKGTVVFVGGPHVIWGLTAHLLDIFLKDILMRYKVQVQ 258
            MITNYTLPALAAGLRDREETLQFCARLLEDGNLEQLERVLHPYQAELITRRRRKTRSLDLAGGLTSKHLNMLRKYLQRSPRQLTRAVSLRASVVIPLCNVNGVASVLFERRSPFVRSFKSQVCFPGGMVEESLDVNIIETSLREMEEEIGFPARSVDVLGVLRCDWSEVHKITGIGVTPVVGFLGDLTEKELSPNPKEVAECFTIPLATLLDVEHWNREEEKGTVVFVGGPHVIWGLTAHLLDIFLKDILMRYKVQVQ
Sbjct:    1 MITNYTLPALAAGLRDREETLQFCARLLEDGNLEQLERVLHPYQAELITRRRRKTRSLDLAGGLTSKHLNMLRKYLQRSPRQLTRAVSLRASVVIPLCNVNGVASVLFERRSPFVRSFKSQVCFPGGMVEESLDVNIIETSLREMEEEIGFPARSVDVLGVLRCDWSEVHKITGIGVTPVVGFLGDLTEKELSPNPKEVAECFTIPLATLLDVEHWNREEEKGTVVFVGGPHVIWGLTAHLLDIFLKDILMRYKVQVQ 258          
BLAST of EWM27968.1 vs. NCBI_GenBank
Match: gi|553187702|ref|XP_005854662.1| (nudix hydrolase 3 [Nannochloropsis gaditana CCMP526] >gi|422294396|gb|EKU21696.1| nudix hydrolase 3 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 525.783 bits (1353), Expect = 0.000e+0
Identity = 257/258 (99.61%), Postives = 258/258 (100.00%), Query Frame = 0
Query:    1 MITNYTLPALAAGLRDREETLQFCARLLEDGNLEQLERVLHPYQAELITRRRRKTRSLDLAGGLTSKHLNMLRKYLQRSPRQLTRAVSLRASVVIPLCNVNGVASVLFERRSPFVRSFKSQVCFPGGMVEESLDVNIIETSLREMEEEIGFPARSVDVLGVLRCDWSEVHKITGIGVTPVVGFLGDLTEKELSPNPKEVAECFTIPLATLLDVEHWNREEEKGTVVFVGGPHVIWGLTAHLLDIFLKDILMRYKVQVQ 258
            MITNYTLPALAAGLRDREETLQFCARLLEDGNLEQL+RVLHPYQAELITRRRRKTRSLDLAGGLTSKHLNMLRKYLQRSPRQLTRAVSLRASVVIPLCNVNGVASVLFERRSPFVRSFKSQVCFPGGMVEESLDVNIIETSLREMEEEIGFPARSVDVLGVLRCDWSEVHKITGIGVTPVVGFLGDLTEKELSPNPKEVAECFTIPLATLLDVEHWNREEEKGTVVFVGGPHVIWGLTAHLLDIFLKDILMRYKVQVQ
Sbjct:    1 MITNYTLPALAAGLRDREETLQFCARLLEDGNLEQLKRVLHPYQAELITRRRRKTRSLDLAGGLTSKHLNMLRKYLQRSPRQLTRAVSLRASVVIPLCNVNGVASVLFERRSPFVRSFKSQVCFPGGMVEESLDVNIIETSLREMEEEIGFPARSVDVLGVLRCDWSEVHKITGIGVTPVVGFLGDLTEKELSPNPKEVAECFTIPLATLLDVEHWNREEEKGTVVFVGGPHVIWGLTAHLLDIFLKDILMRYKVQVQ 258          
BLAST of EWM27968.1 vs. NCBI_GenBank
Match: gi|298709248|emb|CBJ31187.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 266.929 bits (681), Expect = 8.210e-83
Identity = 132/254 (51.97%), Postives = 177/254 (69.69%), Query Frame = 0
Query:    1 MITNYTLPALAAGLRDREETLQFCARLLEDGNLEQLERVLHPYQAELITRRRRKTRSLDL-AGGLTSKHLNMLRKYLQRSPRQLTRAVSLRASVVIPLCNVNGVASVLFERRSPFVRSFKSQVCFPGGMVEESLDVNIIETSLREMEEEIGFPARSVDVLGVLRCDWSEVHKITGIGVTPVVGFLGDLTEKELSPNPKEVAECFTIPLATLLDVEHWNREEEKGTVVFVGGPHVIWGLTAHLLDIFLKDILMRY 253
            ++ ++T PALAA LRDRE  L  CA LLE G+L  + RVL P+ A+ +   RR    LDL   G T  H+  LRK LQR PR +T     RASV++PLCNV+GVASVLF +RS  +R++K+ VCFPGG V+   D +IIET++REM EEIG    SVDVLGVLRCDWSEV  + G+ VTPVVGFLG+L+++++ PNP EV+ CFTIP+  LL+ + W + ++     FVGGP+ IWGLT ++L   + D+L ++
Sbjct:  295 LVESFTAPALAAALRDRETALHMCAHLLEQGDLSGVRRVLLPFTAKQVAESRRALGRLDLEPEGFTKTHMYALRKVLQRLPRHVTTLTEQRASVMVPLCNVDGVASVLFTKRSGNMRAYKNDVCFPGGKVDIGQDQHIIETAVREMGEEIGILESSVDVLGVLRCDWSEVASLIGVAVTPVVGFLGNLSQEQIHPNPDEVSHCFTIPVRFLLEEDRW-QVDKYAAPAFVGGPYQIWGLTGYILHRLVNDVLRQH 547          
BLAST of EWM27968.1 vs. NCBI_GenBank
Match: gi|695438243|ref|XP_009532415.1| (hypothetical protein PHYSODRAFT_515572 [Phytophthora sojae] >gi|348672262|gb|EGZ12082.1| hypothetical protein PHYSODRAFT_515572 [Phytophthora sojae])

HSP 1 Score: 253.062 bits (645), Expect = 5.519e-81
Identity = 131/250 (52.40%), Postives = 165/250 (66.00%), Query Frame = 0
Query:    1 MITNYTLPALAAGLRDREETLQFCARLLEDGNLEQLERVLHPYQAELITRRRRKTRSLDLAGGLTSKHLNMLRKYLQRSPRQLTRAVSLRASVVIPLCNVNGVASVLFERRSPFVRSFKSQVCFPGGMVEESLDVNIIETSLREMEEEIGFPARSVDVLGVLRCDWSEVHKITGIGVTPVVGFLGDLTEKELSPNPKEVAECFTIPLATLLDVEHWNREEEKGTVVFVGGPHVIWGLTAHLLDIFLKDIL 250
            ++ NYT PALAA  +DRE TL  CA LL +G L++LE VL PY  +         RS  LA     +HL  +RK L R PRQ+T+A S RA+VVIPLC   G  SVLF  RS  V   K +VCFPGGMV+ + D  I  T LREM EE+G   + VDVLGVLRCDWS V  ITGI VTPVVGF+G+++++ ++ N +EV   FT+PL  L++ ++W R     T VF GGPHVIWGLTA+LLDI L ++L
Sbjct:    6 LVNNYTAPALAAAYQDREYTLWLCAELLSEGKLDELEAVLKPYH-DFAQHDMNAQRSTPLAKAFGQRHLERIRKRLSRLPRQITKAYSARAAVVIPLCTFEGEPSVLFTLRSLTVGKHKGEVCFPGGMVDPT-DSCIEGTCLREMNEEVGLAPQGVDVLGVLRCDWSSVTSITGIAVTPVVGFIGEMSDQTVAINEQEVESLFTVPLRDLMNQDNWVR-HSNATPVFTGGPHVIWGLTAYLLDICLSEVL 252          
BLAST of EWM27968.1 vs. NCBI_GenBank
Match: gi|301102392|ref|XP_002900283.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262102024|gb|EEY60076.1| conserved hypothetical protein [Phytophthora infestans T30-4])

HSP 1 Score: 250.751 bits (639), Expect = 4.626e-80
Identity = 131/250 (52.40%), Postives = 161/250 (64.40%), Query Frame = 0
Query:    1 MITNYTLPALAAGLRDREETLQFCARLLEDGNLEQLERVLHPYQAELITRRRRKTRSLDLAGGLTSKHLNMLRKYLQRSPRQLTRAVSLRASVVIPLCNVNGVASVLFERRSPFVRSFKSQVCFPGGMVEESLDVNIIETSLREMEEEIGFPARSVDVLGVLRCDWSEVHKITGIGVTPVVGFLGDLTEKELSPNPKEVAECFTIPLATLLDVEHWNREEEKGTVVFVGGPHVIWGLTAHLLDIFLKDIL 250
            ++ NYT PALAA  +DRE TL  CA LL +G L++LE VL PY  +         R   LA     +HL  +RK L R PRQ+T+A S RA+VVIPLC   G  SVLF  RS  V   K +VCFPGGMV+   D  I  T LREM EE+G     VDVLGVLRCDWS V  ITGI VTPVVGF+G+++++ ++ N  EV   FT+P+  L++ ++W R     T VF GGPHVIWGLTA+LLDI L DIL
Sbjct:    6 LVNNYTAPALAAAYQDREYTLWLCAELLSEGKLDELEAVLKPYH-DFAQHDMNTLRQTPLANAFGKRHLERIRKRLSRLPRQITKAYSARAAVVIPLCTFEGEPSVLFTLRSLTVGKHKGEVCFPGGMVDPD-DSCIEGTCLREMNEEVGLAPEGVDVLGVLRCDWSSVTSITGIAVTPVVGFIGEMSDRTVAINEDEVESLFTVPVRDLMNQDNWIR-HSNATPVFTGGPHVIWGLTAYLLDICLSDIL 252          
BLAST of EWM27968.1 vs. NCBI_GenBank
Match: gi|970662556|gb|KUF99933.1| (hypothetical protein AM588_10009239 [Phytophthora nicotianae])

HSP 1 Score: 247.669 bits (631), Expect = 1.583e-78
Identity = 129/250 (51.60%), Postives = 162/250 (64.80%), Query Frame = 0
Query:    1 MITNYTLPALAAGLRDREETLQFCARLLEDGNLEQLERVLHPYQAELITRRRRKTRSLDLAGGLTSKHLNMLRKYLQRSPRQLTRAVSLRASVVIPLCNVNGVASVLFERRSPFVRSFKSQVCFPGGMVEESLDVNIIETSLREMEEEIGFPARSVDVLGVLRCDWSEVHKITGIGVTPVVGFLGDLTEKELSPNPKEVAECFTIPLATLLDVEHWNREEEKGTVVFVGGPHVIWGLTAHLLDIFLKDIL 250
            ++ NYT PALAA  +DRE TL  CA LL +G L++LE VL PY  +         R   LA   + +HL  +RK L R PRQ+T+A S RA+VVIPLC      SVLF  RS  V   K +VCFPGGMV+ + D  I  T LREM EE+G     VDVLGVLRCDWS V  ITGI VTPVVGF+G+++++ ++ N  EV   FT+PL  L++ ++W R     T VF GGPHVIWGLTA+LLDI L ++L
Sbjct:   38 LVNNYTAPALAAAYQDREYTLWLCAELLSEGKLDELEAVLKPYH-DFAQHDINAQRRTPLANAFSKRHLERIRKRLSRLPRQITKAYSARAAVVIPLCTFESEPSVLFTLRSLTVGKHKGEVCFPGGMVDPN-DSCIEGTCLREMNEEVGLAPEGVDVLGVLRCDWSSVTSITGIAVTPVVGFIGEMSDRTVAINEDEVESLFTVPLRDLMNQDNWIR-HSNATPVFTGGPHVIWGLTAYLLDICLSEVL 284          
BLAST of EWM27968.1 vs. NCBI_GenBank
Match: gi|566010191|gb|ETI33102.1| (hypothetical protein F443_20211 [Phytophthora parasitica P1569] >gi|568005817|gb|ETL80097.1| hypothetical protein L917_19399 [Phytophthora parasitica] >gi|568035715|gb|ETM33347.1| hypothetical protein L914_19429 [Phytophthora parasitica] >gi|570967977|gb|ETP31096.1| hypothetical protein F442_20030 [Phytophthora parasitica P10297])

HSP 1 Score: 248.44 bits (633), Expect = 8.391e-78
Identity = 129/250 (51.60%), Postives = 162/250 (64.80%), Query Frame = 0
Query:    1 MITNYTLPALAAGLRDREETLQFCARLLEDGNLEQLERVLHPYQAELITRRRRKTRSLDLAGGLTSKHLNMLRKYLQRSPRQLTRAVSLRASVVIPLCNVNGVASVLFERRSPFVRSFKSQVCFPGGMVEESLDVNIIETSLREMEEEIGFPARSVDVLGVLRCDWSEVHKITGIGVTPVVGFLGDLTEKELSPNPKEVAECFTIPLATLLDVEHWNREEEKGTVVFVGGPHVIWGLTAHLLDIFLKDIL 250
            ++ NYT PALAA  +DRE TL  CA LL +G L++LE VL PY  +         R   LA   + +HL  +RK L R PRQ+T+A S RA+VVIPLC      SVLF  RS  V   K +VCFPGGMV+ + D  I  T LREM EE+G     VDVLGVLRCDWS V  ITGI VTPVVGF+G+++++ ++ N  EV   FT+PL  L++ ++W R     T VF GGPHVIWGLTA+LLDI L ++L
Sbjct:  110 LVNNYTAPALAAAYQDREYTLWLCAELLSEGKLDELEAVLKPYH-DFAQHDINAQRRTPLANAFSKRHLERIRKRLSRLPRQITKAYSARAAVVIPLCTFESEPSVLFTLRSLTVGKHKGEVCFPGGMVDPN-DSCIEGTCLREMNEEVGLAPEGVDVLGVLRCDWSSVTSITGIAVTPVVGFIGEMSDRTVAINEDEVESLFTVPLRDLMNQDNWIR-HSNATPVFTGGPHVIWGLTAYLLDICLSEVL 356          
BLAST of EWM27968.1 vs. NCBI_GenBank
Match: gi|567947655|gb|ETK73431.1| (hypothetical protein L915_19658 [Phytophthora parasitica])

HSP 1 Score: 248.44 bits (633), Expect = 9.152e-78
Identity = 129/250 (51.60%), Postives = 162/250 (64.80%), Query Frame = 0
Query:    1 MITNYTLPALAAGLRDREETLQFCARLLEDGNLEQLERVLHPYQAELITRRRRKTRSLDLAGGLTSKHLNMLRKYLQRSPRQLTRAVSLRASVVIPLCNVNGVASVLFERRSPFVRSFKSQVCFPGGMVEESLDVNIIETSLREMEEEIGFPARSVDVLGVLRCDWSEVHKITGIGVTPVVGFLGDLTEKELSPNPKEVAECFTIPLATLLDVEHWNREEEKGTVVFVGGPHVIWGLTAHLLDIFLKDIL 250
            ++ NYT PALAA  +DRE TL  CA LL +G L++LE VL PY  +         R   LA   + +HL  +RK L R PRQ+T+A S RA+VVIPLC      SVLF  RS  V   K +VCFPGGMV+ + D  I  T LREM EE+G     VDVLGVLRCDWS V  ITGI VTPVVGF+G+++++ ++ N  EV   FT+PL  L++ ++W R     T VF GGPHVIWGLTA+LLDI L ++L
Sbjct:  110 LVNNYTAPALAAAYQDREYTLWLCAELLSEGKLDELEAVLKPYH-DFAQHDINAQRRTPLANAFSKRHLERIRKRLSRLPRQITKAYSARAAVVIPLCTFESEPSVLFTLRSLTVGKHKGEVCFPGGMVDPN-DSCIEGTCLREMNEEVGLAPEGVDVLGVLRCDWSSVTSITGIAVTPVVGFIGEMSDRTVAINEDEVESLFTVPLRDLMNQDNWIR-HSNATPVFTGGPHVIWGLTAYLLDICLSEVL 356          
BLAST of EWM27968.1 vs. NCBI_GenBank
Match: gi|567976334|gb|ETL26861.1| (hypothetical protein L916_19546 [Phytophthora parasitica] >gi|570937654|gb|ETP02911.1| hypothetical protein F441_20091 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 248.054 bits (632), Expect = 1.009e-77
Identity = 129/250 (51.60%), Postives = 162/250 (64.80%), Query Frame = 0
Query:    1 MITNYTLPALAAGLRDREETLQFCARLLEDGNLEQLERVLHPYQAELITRRRRKTRSLDLAGGLTSKHLNMLRKYLQRSPRQLTRAVSLRASVVIPLCNVNGVASVLFERRSPFVRSFKSQVCFPGGMVEESLDVNIIETSLREMEEEIGFPARSVDVLGVLRCDWSEVHKITGIGVTPVVGFLGDLTEKELSPNPKEVAECFTIPLATLLDVEHWNREEEKGTVVFVGGPHVIWGLTAHLLDIFLKDIL 250
            ++ NYT PALAA  +DRE TL  CA LL +G L++LE VL PY  +         R   LA   + +HL  +RK L R PRQ+T+A S RA+VVIPLC      SVLF  RS  V   K +VCFPGGMV+ + D  I  T LREM EE+G     VDVLGVLRCDWS V  ITGI VTPVVGF+G+++++ ++ N  EV   FT+PL  L++ ++W R     T VF GGPHVIWGLTA+LLDI L ++L
Sbjct:  110 LVNNYTAPALAAAYQDREYTLWLCAELLSEGKLDELEAVLKPYH-DFAQHDINAQRRTPLANAFSKRHLERIRKRLSRLPRQITKAYSARAAVVIPLCTFESEPSVLFTLRSLTVGKHKGEVCFPGGMVDPN-DSCIEGTCLREMNEEVGLAPEGVDVLGVLRCDWSSVTSITGIAVTPVVGFIGEMSDRTVAINEDEVESLFTVPLRDLMNQDNWIR-HSNATPVFTGGPHVIWGLTAYLLDICLSEVL 356          
BLAST of EWM27968.1 vs. NCBI_GenBank
Match: gi|675210833|ref|XP_008914301.1| (hypothetical protein PPTG_18137 [Phytophthora parasitica INRA-310] >gi|568085556|gb|ETN00461.1| hypothetical protein PPTG_18137 [Phytophthora parasitica INRA-310] >gi|570313888|gb|ETO61836.1| hypothetical protein F444_20226 [Phytophthora parasitica P1976])

HSP 1 Score: 247.669 bits (631), Expect = 1.367e-77
Identity = 129/250 (51.60%), Postives = 162/250 (64.80%), Query Frame = 0
Query:    1 MITNYTLPALAAGLRDREETLQFCARLLEDGNLEQLERVLHPYQAELITRRRRKTRSLDLAGGLTSKHLNMLRKYLQRSPRQLTRAVSLRASVVIPLCNVNGVASVLFERRSPFVRSFKSQVCFPGGMVEESLDVNIIETSLREMEEEIGFPARSVDVLGVLRCDWSEVHKITGIGVTPVVGFLGDLTEKELSPNPKEVAECFTIPLATLLDVEHWNREEEKGTVVFVGGPHVIWGLTAHLLDIFLKDIL 250
            ++ NYT PALAA  +DRE TL  CA LL +G L++LE VL PY  +         R   LA   + +HL  +RK L R PRQ+T+A S RA+VVIPLC      SVLF  RS  V   K +VCFPGGMV+ + D  I  T LREM EE+G     VDVLGVLRCDWS V  ITGI VTPVVGF+G+++++ ++ N  EV   FT+PL  L++ ++W R     T VF GGPHVIWGLTA+LLDI L ++L
Sbjct:  110 LVNNYTAPALAAAYQDREYTLWLCAELLSEGKLDELEAVLKPYH-DFAQHDINAQRRTPLANAFSKRHLERIRKRLSRLPRQITKAYSARAAVVIPLCTFESEPSVLFTLRSLTVGKHKGEVCFPGGMVDPN-DSCIEGTCLREMNEEVGLAPEGVDVLGVLRCDWSSVTSITGIAVTPVVGFIGEMSDRTVAINEDEVESLFTVPLRDLMNQDNWIR-HSNATPVFTGGPHVIWGLTAYLLDICLSEVL 356          
The following BLAST results are available for this feature:
BLAST of EWM27968.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585110309|gb|EWM27968.1|0.000e+0100.00nudix hydrolase 3 [Nannochloropsis gaditana][more]
gi|553187702|ref|XP_005854662.1|0.000e+099.61nudix hydrolase 3 [Nannochloropsis gaditana CCMP52... [more]
gi|298709248|emb|CBJ31187.1|8.210e-8351.97conserved unknown protein [Ectocarpus siliculosus][more]
gi|695438243|ref|XP_009532415.1|5.519e-8152.40hypothetical protein PHYSODRAFT_515572 [Phytophtho... [more]
gi|301102392|ref|XP_002900283.1|4.626e-8052.40conserved hypothetical protein [Phytophthora infes... [more]
gi|970662556|gb|KUF99933.1|1.583e-7851.60hypothetical protein AM588_10009239 [Phytophthora ... [more]
gi|566010191|gb|ETI33102.1|8.391e-7851.60hypothetical protein F443_20211 [Phytophthora para... [more]
gi|567947655|gb|ETK73431.1|9.152e-7851.60hypothetical protein L915_19658 [Phytophthora para... [more]
gi|567976334|gb|ETL26861.1|1.009e-7751.60hypothetical protein L916_19546 [Phytophthora para... [more]
gi|675210833|ref|XP_008914301.1|1.367e-7751.60hypothetical protein PPTG_18137 [Phytophthora para... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2725rna2725Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications