EWM28043.1, cds2715 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28043.1 vs. NCBI_GenBank
Match: gi|585110384|gb|EWM28043.1| (dehydrogenase reductase sdr family member 13 precursor [Nannochloropsis gaditana]) HSP 1 Score: 771.926 bits (1992), Expect = 0.000e+0 Identity = 374/374 (100.00%), Postives = 374/374 (100.00%), Query Frame = 0
Query: 1 MLTPLHWIWNGPLALGWVTSSAIVFPILRKVGLVPEANKLDFIANDMRGKIVIVTGSNTGIGRATALNICKMGATVILACRSMERAKAARDEMLEELHSLDAGHRFDFPFARKGTLVCMRLDLGSFASIKTFAEDFLGRYKRLDALVLNAGLANGSGRTKEGFEIMFGTNYLGHFYLTKLLMDVVKATPDSRIVSVSSLMHEFGCLDWQGSLSGNYRALKDRIFSSRYNDSKLALVLMTLELRHRLKGTSVRAIAVSPGAVASDIWRSFPLWYRRLVLDPVMSLAFLSNEQGSIPSVYAATHSNVSDEDEDDETNVPYFHPYWSPSPSFLMPWEVMGPFIGFTRARPRLPRNARAVAKELWYESEKQVIQHTKI 374
MLTPLHWIWNGPLALGWVTSSAIVFPILRKVGLVPEANKLDFIANDMRGKIVIVTGSNTGIGRATALNICKMGATVILACRSMERAKAARDEMLEELHSLDAGHRFDFPFARKGTLVCMRLDLGSFASIKTFAEDFLGRYKRLDALVLNAGLANGSGRTKEGFEIMFGTNYLGHFYLTKLLMDVVKATPDSRIVSVSSLMHEFGCLDWQGSLSGNYRALKDRIFSSRYNDSKLALVLMTLELRHRLKGTSVRAIAVSPGAVASDIWRSFPLWYRRLVLDPVMSLAFLSNEQGSIPSVYAATHSNVSDEDEDDETNVPYFHPYWSPSPSFLMPWEVMGPFIGFTRARPRLPRNARAVAKELWYESEKQVIQHTKI
Sbjct: 1 MLTPLHWIWNGPLALGWVTSSAIVFPILRKVGLVPEANKLDFIANDMRGKIVIVTGSNTGIGRATALNICKMGATVILACRSMERAKAARDEMLEELHSLDAGHRFDFPFARKGTLVCMRLDLGSFASIKTFAEDFLGRYKRLDALVLNAGLANGSGRTKEGFEIMFGTNYLGHFYLTKLLMDVVKATPDSRIVSVSSLMHEFGCLDWQGSLSGNYRALKDRIFSSRYNDSKLALVLMTLELRHRLKGTSVRAIAVSPGAVASDIWRSFPLWYRRLVLDPVMSLAFLSNEQGSIPSVYAATHSNVSDEDEDDETNVPYFHPYWSPSPSFLMPWEVMGPFIGFTRARPRLPRNARAVAKELWYESEKQVIQHTKI 374
BLAST of EWM28043.1 vs. NCBI_GenBank
Match: gi|553187712|ref|XP_005854665.1| (short-chain dehydrogenase [Nannochloropsis gaditana CCMP526] >gi|422294399|gb|EKU21699.1| short-chain dehydrogenase [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 650.203 bits (1676), Expect = 0.000e+0 Identity = 315/315 (100.00%), Postives = 315/315 (100.00%), Query Frame = 0
Query: 47 MRGKIVIVTGSNTGIGRATALNICKMGATVILACRSMERAKAARDEMLEELHSLDAGHRFDFPFARKGTLVCMRLDLGSFASIKTFAEDFLGRYKRLDALVLNAGLANGSGRTKEGFEIMFGTNYLGHFYLTKLLMDVVKATPDSRIVSVSSLMHEFGCLDWQGSLSGNYRALKDRIFSSRYNDSKLALVLMTLELRHRLKGTSVRAIAVSPGAVASDIWRSFPLWYRRLVLDPVMSLAFLSNEQGSIPSVYAATHSNVSDEDEDDETNVPYFHPYWSPSPSFLMPWEVMGPFIGFTRARPRLPRNARAVAKELW 361
MRGKIVIVTGSNTGIGRATALNICKMGATVILACRSMERAKAARDEMLEELHSLDAGHRFDFPFARKGTLVCMRLDLGSFASIKTFAEDFLGRYKRLDALVLNAGLANGSGRTKEGFEIMFGTNYLGHFYLTKLLMDVVKATPDSRIVSVSSLMHEFGCLDWQGSLSGNYRALKDRIFSSRYNDSKLALVLMTLELRHRLKGTSVRAIAVSPGAVASDIWRSFPLWYRRLVLDPVMSLAFLSNEQGSIPSVYAATHSNVSDEDEDDETNVPYFHPYWSPSPSFLMPWEVMGPFIGFTRARPRLPRNARAVAKELW
Sbjct: 1 MRGKIVIVTGSNTGIGRATALNICKMGATVILACRSMERAKAARDEMLEELHSLDAGHRFDFPFARKGTLVCMRLDLGSFASIKTFAEDFLGRYKRLDALVLNAGLANGSGRTKEGFEIMFGTNYLGHFYLTKLLMDVVKATPDSRIVSVSSLMHEFGCLDWQGSLSGNYRALKDRIFSSRYNDSKLALVLMTLELRHRLKGTSVRAIAVSPGAVASDIWRSFPLWYRRLVLDPVMSLAFLSNEQGSIPSVYAATHSNVSDEDEDDETNVPYFHPYWSPSPSFLMPWEVMGPFIGFTRARPRLPRNARAVAKELW 315
BLAST of EWM28043.1 vs. NCBI_GenBank
Match: gi|299469969|emb|CBN79146.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 230.335 bits (586), Expect = 7.750e-69 Identity = 138/332 (41.57%), Postives = 197/332 (59.34%), Query Frame = 0
Query: 46 DMRGKIVIVTGSNTGIGRATALNICKMGATVILACRSMERAKAAR----DEMLEELHSLDAGHRFDFPFARKGTLVCMRLDLGSFASIKTFAEDFLGRY-KRLDALVLNA--GLANGSGRTKEGFEIMFGTNYLGHFYLTKLLMDVVKATPDSRIVSVSSLMHEFGCLDWQGSLSGNYRALKDRIFSSRYNDSKLALVLMTLELRHRL--KGTSVRAIAVSPGAVASDIWRSFPLWYRRLVLDPVMSLAFLSNEQGSIPSVYAATHSNVSDEDEDDETNVPYFHPYWSPSPSFLMPWEVMGPFIGFTRARPRLPRNARAVAKELWYESEKQV 368
D+ G++VIVTG+NTGIG TA N+ K GA VI+ACRS+ER ++AR +EM E L ++ G AR+GTL M+ DL S++TFA +F ++ RLD LV NA G+ +G T +G +++FG N++GHF LT L+ ++++TP +R+V +SS+MH G DW+ ++ G+ K R S Y DSKLA+V+ EL+ R G+S A+AV+PGAV SDIWR+ P V D M FL++EQGS SV AA + + Y+ PYW P L P+EV GPF+G P+L ++ A LW E+ +
Sbjct: 42 DLSGRVVIVTGANTGIGSRTAFNLAKAGAKVIMACRSLERGESARQQLEEEMRETLSKVEGGGGAS--AARQGTLEVMKCDLSELESVRTFAREFKVKHGDRLDVLVNNAGVGITDGPRVTADGLDLVFGVNFVGHFCLTNELLPLIQSTPAARVVCLSSVMHHSGGTDWESAVMGHP---KRR--GSTYADSKLAMVIFAKELKKRFAAAGSSATAVAVNPGAVRSDIWRNVPKLVMP-VFDLFMRFLFLTSEQGSYTSVRAAALP------LETVSGSGYYQPYWMPFKRPL-PFEVFGPFVGCAPGLPKLVKDEPAATSALWTTCERVI 358
BLAST of EWM28043.1 vs. NCBI_GenBank
Match: gi|551659645|ref|XP_005832591.1| (hypothetical protein GUITHDRAFT_108486 [Guillardia theta CCMP2712] >gi|428176728|gb|EKX45611.1| hypothetical protein GUITHDRAFT_108486 [Guillardia theta CCMP2712]) HSP 1 Score: 199.519 bits (506), Expect = 1.372e-57 Identity = 127/332 (38.25%), Postives = 187/332 (56.33%), Query Frame = 0
Query: 47 MRGKIVIVTGSNTGIGRATALNICKMGATVILACRSMERAKAARDEMLEELHSLDAGHR-----FDFPFARKGTLVCMRLDLGSFASIKTFAEDFLGRYKRLDALVLNAGLANGSG-----RTKEGFEIMFGTNYLGHFYLTKLLMDVVKATPDSRIVSVSSLMHEFGCLDWQGSLSGNYRALKDRIFSSRYNDSKLALVLMTLELRHRLKGTSVRAIAVSPGAVASDIWRSF-PLWYRRLVLDPVMSLAFLSNEQGSIPSVYAATHSNVSDEDEDDETNVP-YFHPYWSPSPSFLMPWEVMGPFIGFTRARPRLPRNARAVAKELWYESEK 366
M GK VIVTG+N GIG+ TA ++ GA VI+ACRS++R +AAR E+ L S ++ + D P G L+ LD+ S+K FA + + ++D LV NAG+ NG G +T +G +FGTN++GHF LT+LL + + RIV++SS+MH +G D +A+ + +Y +SKLA+V +T EL+ + T V ++AV+PG VASDIWR P + M++ L +QG+ SV AA S ++E + VP Y PYW PS + L P+E+MG F G PR+ +N + ++ ELW E K
Sbjct: 1 MEGKTVIVTGANAGIGKTTAASLYANGACVIMACRSLQRGEAARQEIEAMLASPESSRKQLWIHSDRP--HPGKLLVRELDVSDLESVKRFAISIVKEFSKIDVLVNNAGI-NGMGTDIPSKTPQGIPFIFGTNFVGHFLLTRLLHPNLSKSGGGRIVNLSSVMHHWGSKDVS-------KAVSSGKYPRQYQNSKLAMVHLTAELQRQYAETRVSSVAVNPGFVASDIWRGIRPDSLVGRMFRLAMAVLALDTKQGAATSVAAACMS----DEEICGSKVPLYLVPYWVPSFARL-PFEMMGVFTGVHSCPPRVSKNEKQISMELWKECTK 317
BLAST of EWM28043.1 vs. NCBI_GenBank
Match: gi|657735461|ref|XP_008312876.1| (PREDICTED: dehydrogenase/reductase SDR family member 13-like [Cynoglossus semilaevis]) HSP 1 Score: 184.882 bits (468), Expect = 4.946e-52 Identity = 111/256 (43.36%), Postives = 160/256 (62.50%), Query Frame = 0
Query: 49 GKIVIVTGSNTGIGRATALNICKMGATVILACRSMERAKAARDEMLEELHSLDAGHRFDFPFARKGTLVCMRLDLGSFASIKTFAEDFLGRYKRLDALVLNAGLANGSGRTKEGFEIMFGTNYLGHFYLTKLLMDVVKATPDSRIVSVSSLMHEFGCLDWQGSLSGNYRALKDRIFS----SRYNDSKLALVLMTLELRHRLKGTSVRAIAVSPGAVASDIWRSFPLWYRRLVLDPVMSLAFLSNEQGSIPSVYAA 300
GK VI+TG NTGIG+ATAL++ + GA VILACR+ ++A+AA E+ +E S D+ V M LDL S S+++FAE FL KRLD L+ NAGL G GRT++GF + FG N+LGHF LT LL+ +K T R++++SS+ H++G +D+ SL+ N R L +S Y SKL VL T EL RLKG+ V +V PG V +++ R+ LW +++ ++PV L FL+ E G+ +++ A
Sbjct: 36 GKCVIITGGNTGIGKATALHLARRGARVILACRNRDKAEAAIAEIQQETGSTDS--------------VYMHLDLASLKSVRSFAETFLNTEKRLDLLINNAGLV-GDGRTEDGFGVQFGVNHLGHFLLTCLLLKRMKDTGGGRVITLSSMAHQWGHIDFD-SLALN-RHLGTGSYSWQFFHAYCSSKLCNVLFTYELAKRLKGSDVTCYSVHPGVVRTELSRNVSLW-QKVFIEPVARLLFLTPEDGAQTTLHCA 273
BLAST of EWM28043.1 vs. NCBI_GenBank
Match: gi|734641214|ref|XP_010749478.1| (PREDICTED: dehydrogenase/reductase SDR family member 13 [Larimichthys crocea] >gi|1108923499|ref|XP_019116230.1| PREDICTED: dehydrogenase/reductase SDR family member 13-like [Larimichthys crocea]) HSP 1 Score: 176.407 bits (446), Expect = 8.904e-49 Identity = 114/263 (43.35%), Postives = 160/263 (60.84%), Query Frame = 0
Query: 47 MRGKIVIVTGSNTGIGRATALNICKMGATVILACRSMERAKAARDEMLEELHSLDAGHRFDFPFARKGTLVCMRLDLGSFASIKTFAEDFLGRYKRLDALVLNAGLANGSGRTKEGFEIMFGTNYLGHFYLTKLLMDVVKATPDSRIVSVSSLMHEFGCLDWQGSLSGNYRALKDRI----FSSRYNDSKLALVLMTLELRHRLKGTSVRAIAVSPGAVASDIWRSFPLWYRRLVLDPVMSLAFLSNEQGSIPSVYAATHSNV 305
+RGK IVTGSNTGIG+ATAL++ K GA VILACR E+A+AA ++ E + +V M+LDL SF S++ FAE+FL RLD L+ NAG+ + GRTKEGF + FG N+LGHF LT LL++ ++ SR+V+VS L+ FG +D+ L+ N + D+ F + Y +SKL VL T EL +RL+GTSV ++ PG + +D+ RS LW + L++ P L FL E GS ++Y A +
Sbjct: 34 LRGKTAIVTGSNTGIGKATALDLAKRGARVILACRDKEKAEAAAFDIRRE--------------SGNTQVVFMQLDLSSFKSVRNFAENFLKNEPRLDILINNAGVMS-PGRTKEGFGMAFGVNHLGHFLLTNLLLERLQQCGPSRVVTVSGLLQRFGNIDFP-LLASNKDLVTDQSTWHNFQA-YCNSKLCNVLFTRELANRLEGTSVTCYSLHPGVIYTDLCRSMSLWLQLLMI-PFAKLFFLDPEGGSQTTLYCALQEGI 278
BLAST of EWM28043.1 vs. NCBI_GenBank
Match: gi|928064214|ref|XP_013881680.1| (PREDICTED: dehydrogenase/reductase SDR family member 13-like [Austrofundulus limnaeus]) HSP 1 Score: 175.252 bits (443), Expect = 2.537e-48 Identity = 114/267 (42.70%), Postives = 159/267 (59.55%), Query Frame = 0
Query: 47 MRGKIVIVTGSNTGIGRATALNICKMGATVILACRSMERAKAARDEMLEELHSLDAGHRFDFPFARKGTLVCMRLDLGSFASIKTFAEDFLGRYKRLDALVLNAGLANGSGRTKEGFEIMFGTNYLGHFYLTKLLMDVVKATPDSRIVSVSSLMHEFG-----CLDWQGSL---SGNYRALKDRIFSSRYNDSKLALVLMTLELRHRLKGTSVRAIAVSPGAVASDIWRSFPLWYRRLVLDPVMSLAFLSNEQGSIPSVYAATHSNV 305
+ GK VIVTGSNTGIG+ TA+++ + GA VILACRS +R +AA E+ E S +V M+LDLGS S+++FAE FL RLD L+ NAG+ GRT++GF +MFG N+LGHF LT LL+D +K SRIV+VSSL H FG CL+ +L + N A K Y+DSKL VL T EL RL+GTSV ++ PGA+ +++ R+ ++ +++L PV F + QGS +++ A +
Sbjct: 33 LHGKTVIVTGSNTGIGKTTAIDLAQRGARVILACRSKQRGEAALQEVRRESGS--------------NQVVFMQLDLGSLKSVRSFAETFLKSEPRLDILINNAGVYM-QGRTEDGFGLMFGVNHLGHFLLTNLLLDRLKECGPSRIVNVSSLAHNFGKIDFDCLNSHKTLRIGTSNTEAFKI------YSDSKLCNVLFTHELAKRLQGTSVTCYSLHPGAITTELTRNAS-FFSKIILQPVKLFLFKNVVQGSQTTLHCALQEGI 277
BLAST of EWM28043.1 vs. NCBI_GenBank
Match: gi|966715780|gb|KTG48018.1| (hypothetical protein cypCar_00018687 [Cyprinus carpio]) HSP 1 Score: 174.866 bits (442), Expect = 4.246e-48 Identity = 109/266 (40.98%), Postives = 160/266 (60.15%), Query Frame = 0
Query: 46 DMRGKIVIVTGSNTGIGRATALNICKMGATVILACRSMERAKAARDEMLEELHSLDAGHRFDFPFARKGTLVCMRLDLGSFASIKTFAEDFLGRYKRLDALVLNAGLANGSGRTKEGFEIMFGTNYLGHFYLTKLLMDVVKATPDSRIVSVSSLMHEFGCLDWQGSL------SGNYRALKDRIFSSRYNDSKLALVLMTLELRHRLKGTSVRAIAVSPGAVASDIWRSFPLWYRRLVLDPVMSLAFLSNEQGSIPSVYAATHSNV 305
DM GK I+TG NTGIG+ATAL++ G VILACR+ ++A+AA +++ + S D ++ M LDLGSF S++TFAE+FL +LD L+ NAGL GRT++GF I FG N+LGHF LT LL+D +K +P +R+V++SS+ H +G +D+ + SG Y F Y +SKL VL T EL RLKGT+V +V PG V +++ R LW +++ ++PV L FL + G+ +++ A +
Sbjct: 33 DMTGKTAIITGGNTGIGKATALDLAGRGVRVILACRNQKKAEAAINDIKKATGSND--------------ILFMELDLGSFKSVRTFAENFLKSESKLDLLINNAGLV-ADGRTEDGFGIEFGVNHLGHFLLTCLLLDRLKESPAARVVTLSSMAHSWGKIDFDSLVATKDLGSGRY----SWQFFQAYCNSKLCNVLFTHELAKRLKGTNVTCYSVHPGVVKTELSRHVSLW-QKVFIEPVARLLFLDPKTGAQTTLHCAIQEGI 278
BLAST of EWM28043.1 vs. NCBI_GenBank
Match: gi|1007733534|ref|XP_015807550.1| (PREDICTED: dehydrogenase/reductase SDR family member 13-like [Nothobranchius furzeri]) HSP 1 Score: 174.481 bits (441), Expect = 5.657e-48 Identity = 111/263 (42.21%), Postives = 156/263 (59.32%), Query Frame = 0
Query: 46 DMRGKIVIVTGSNTGIGRATALNICKMGATVILACRSMERAKAARDEMLEELHSLDAGHRFDFPFARKGTLVCMRLDLGSFASIKTFAEDFLGRYKRLDALVLNAGLANGSGRTKEGFEIMFGTNYLGHFYLTKLLMDVVKATPDSRIVSVSSLMHEFGCLDWQGSLSGNYRALKD---RIFSSRYNDSKLALVLMTLELRHRLKGTSVRAIAVSPGAVASDIWRSFPLWYRRLVLDPVMSLAFLSNEQGSIPSVYAATHSNV 305
++ GK VIVTGSNTGIGR TA+N+ + GA VILACR +R +AA++++ E S +V M+LDLGS S+++FAE FL RLD L+ NAG+ GRTK+GF +MFG N+LGHF LT LL++ +K + SRIV+VSS+ H FG +D+ + L R+F Y DSKL VL EL RL+GT V A+ PGA++S++ R+ ++L PV L F + QG +++ A +
Sbjct: 33 ELHGKTVIVTGSNTGIGRTTAINLARRGARVILACRCKQRGEAAQEDIRRESGS--------------NQVVFMQLDLGSLESVRSFAETFLKSEPRLDLLINNAGICM-QGRTKDGFGLMFGVNHLGHFLLTNLLLERLKESAPSRIVNVSSMAHNFGKIDFDSLNTHKCLGLGTSSVRVFQI-YCDSKLCNVLFNHELAKRLQGTRVTCYALHPGAISSELGRNTSSLL-HVLLKPVTVLFFKNTVQGCQTTLHCALQEGI 278
BLAST of EWM28043.1 vs. NCBI_GenBank
Match: gi|929283310|ref|XP_014018630.1| (PREDICTED: dehydrogenase/reductase SDR family member 13-like [Salmo salar] >gi|221219646|gb|ACM08484.1| Dehydrogenase/reductase SDR family member 13 precursor [Salmo salar]) HSP 1 Score: 173.326 bits (438), Expect = 1.456e-47 Identity = 112/263 (42.59%), Postives = 163/263 (61.98%), Query Frame = 0
Query: 47 MRGKIVIVTGSNTGIGRATALNICKMGATVILACRSMERAKAARDEMLEELHSLDAGHRFDFPFARKGTLVCMRLDLGSFASIKTFAEDFLGRYKRLDALVLNAGLANGSGRTKEGFEIMFGTNYLGHFYLTKLLMDVVKATPDSRIVSVSSLMHEFGCLDWQGSLSGNYRAL---KDRIFSSR-YNDSKLALVLMTLELRHRLKGTSVRAIAVSPGAVASDIWRSFPLWYRRLVLDPVMSLAFLSNEQGSIPSVYAATHSNV 305
++GK IVTGSNTGIG+ATAL++ K GA VILACRS ++A+AA ++ E S +V M LDLGS S+++FAE FL RLD L+ NAG+ G G T++GF ++FG N+LGHF LT LL+D +K SR+V+VS+L+H G +D+ +L G ++ L + + R Y SKL VL T EL +RL+GTSV ++ PG + ++ R+ LW +RL L+P+ L F+ E+G+ ++Y A +
Sbjct: 34 LKGKTAIVTGSNTGIGKATALDLAKRGARVILACRSKQKAEAAVYDIRRESGS--------------NEVVFMHLDLGSLKSVRSFAETFLKTELRLDLLINNAGML-GPGYTEDGFGMVFGVNHLGHFLLTCLLLDRLKECGPSRVVNVSALLHRLGSVDF--ALLGTHKDLVPGQSTWHNFRAYCHSKLCNVLFTRELANRLEGTSVTTYSLHPGVIHTEFGRNLKLW-QRLFLEPISKLFFMDAERGAQTTLYCALQEGI 278 The following BLAST results are available for this feature:
BLAST of EWM28043.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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