EWM28039.1, cds2706 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28039.1 vs. NCBI_GenBank
Match: gi|585110380|gb|EWM28039.1| (rossmann-fold nad -binding domain-containing protein [Nannochloropsis gaditana]) HSP 1 Score: 795.808 bits (2054), Expect = 0.000e+0 Identity = 384/384 (100.00%), Postives = 384/384 (100.00%), Query Frame = 0 Query: 1 MPCPKRRRGLLRRSAALSDKFSVPGCFLLFLASLHLMLTRSTVGVFAFVLATPHRSLAKVHSLILDSSISSTVRHTCMDMQASTQEKDLLVVGMGTLGRFLGQSWRESFGNDAIIYGETSTDNRHDDLRSIGVKPFMRSERVGTLAEQGHEAFSHVVFCVPPSKNQDYVEEVKEALKLWTGKGGFVFTSSGGVYAEDEGGTVNESAALSPNPRMSKILAAEEAVIAGGGTVLRLAGLYTQTRGPHTFWLSKGEVGATEEGLINLLHYEDAARATMAALLHHHEKADQNFGRVLLISDNQPLTRKQICEAAVQSPFFRGKYEMPIFKRPSDTPRSLGKVYDTSASRAALGGWTPKYPSFAVFMASSRPSEAEAAKSGHTTNAAVR 384 MPCPKRRRGLLRRSAALSDKFSVPGCFLLFLASLHLMLTRSTVGVFAFVLATPHRSLAKVHSLILDSSISSTVRHTCMDMQASTQEKDLLVVGMGTLGRFLGQSWRESFGNDAIIYGETSTDNRHDDLRSIGVKPFMRSERVGTLAEQGHEAFSHVVFCVPPSKNQDYVEEVKEALKLWTGKGGFVFTSSGGVYAEDEGGTVNESAALSPNPRMSKILAAEEAVIAGGGTVLRLAGLYTQTRGPHTFWLSKGEVGATEEGLINLLHYEDAARATMAALLHHHEKADQNFGRVLLISDNQPLTRKQICEAAVQSPFFRGKYEMPIFKRPSDTPRSLGKVYDTSASRAALGGWTPKYPSFAVFMASSRPSEAEAAKSGHTTNAAVR Sbjct: 1 MPCPKRRRGLLRRSAALSDKFSVPGCFLLFLASLHLMLTRSTVGVFAFVLATPHRSLAKVHSLILDSSISSTVRHTCMDMQASTQEKDLLVVGMGTLGRFLGQSWRESFGNDAIIYGETSTDNRHDDLRSIGVKPFMRSERVGTLAEQGHEAFSHVVFCVPPSKNQDYVEEVKEALKLWTGKGGFVFTSSGGVYAEDEGGTVNESAALSPNPRMSKILAAEEAVIAGGGTVLRLAGLYTQTRGPHTFWLSKGEVGATEEGLINLLHYEDAARATMAALLHHHEKADQNFGRVLLISDNQPLTRKQICEAAVQSPFFRGKYEMPIFKRPSDTPRSLGKVYDTSASRAALGGWTPKYPSFAVFMASSRPSEAEAAKSGHTTNAAVR 384
BLAST of EWM28039.1 vs. NCBI_GenBank
Match: gi|551674787|ref|XP_005840148.1| (hypothetical protein GUITHDRAFT_64569 [Guillardia theta CCMP2712] >gi|428184313|gb|EKX53168.1| hypothetical protein GUITHDRAFT_64569 [Guillardia theta CCMP2712]) HSP 1 Score: 224.172 bits (570), Expect = 9.365e-68 Identity = 123/278 (44.24%), Postives = 173/278 (62.23%), Query Frame = 0 Query: 84 TQEKDLLVVGMGTLGRFLGQSWRESFGNDAIIYGETSTDNRHDDLRSIGVKPFMRSERVGTLAEQGHEAFSHVVFCVPPSKNQDYVEEVKEALKLWTGKGGFVFTSSGGVYAEDEGGTVNESAALSPNPRMSKILAAEEAVIAGGGTVLRLAGLYTQTRGPHTFWLSKGEVGATEEGLINLLHYEDAARATMAALLHHHEKADQNFGRVLLISDNQPLTRKQICEAAVQSPFFRGKYEMPIFKRPSDTPRSLGKVYDTSASRAALGGWTPKYPSFAVF 361 + ++DLLVVG GTLG L Q +E F +A + ET TD +H+ L+S+G + T+++ G E F++VVFC P N +Y EV AL +W+G G FVFTSSGGVYAE GGTVNE + ++ + R K++ AE+ GG+VLRLAGLYT RG H +WL+ G+V +GLI L+ YEDAA A + L EK+ + G V +I D + TR+ ICE+A+++ +R K ++P+F + T +GK YD S+A GW P+YPSF F Sbjct: 2 SHQRDLLVVGAGTLGSLLIQQHKEKF-PEARVVAETRTDAKHEALKSLGAEAR-------TVSQAGDEKFANVVFCAAPGGNDNYAAEVDRALNMWSGAGKFVFTSSGGVYAESSGGTVNEQSPVASSARTQKLIDAEKCTTERGGSVLRLAGLYTLERGAHNYWLNAGKVDGRPDGLIGLVSYEDAAAAALTVL--SSEKSVK--GEVFVICDGKEQTRQDICESALKTAMYRDK-KLPVF---TTTEGPIGKRYDI--SKALELGWKPRYPSFDEF 261
BLAST of EWM28039.1 vs. NCBI_GenBank
Match: gi|727470568|ref|XP_010517243.1| (PREDICTED: uncharacterized protein LOC104792722 [Camelina sativa]) HSP 1 Score: 222.246 bits (565), Expect = 8.433e-66 Identity = 122/307 (39.74%), Postives = 180/307 (58.63%), Query Frame = 0 Query: 67 SSISSTVRHTCMDMQASTQ----EKDLLVVGMGTLGRFLGQSWRESFGNDAIIYGETSTDNRHDDLRSIGVKPFMRSERVGTLAEQGHEAFSHVVFCVPPSKNQDYVEEVKEALKLWTGKGGFVFTSSGGVYAEDEGGTVNESAALSP---NPRMSKILAAEEAVIAGGGTVLRLAGLYTQTRGPHTFWLSKGEVGATEEGLINLLHYEDAARATMAALLHHHEKADQNFGRVLLISDNQPLTRKQICEAAVQSPFFRGKYEMPIFKRPSDTPRSLGKVYDTSASRAALGGWTPKYPSFAVFMASSR 366 SS S+T+ T ++ + DLL+VG G LGR + + WR+ ++ I+G+T+T HD+L + +KPF++ G + FS+V+FC PPS++ DY EV+ A W GKG F+FTSS Y + G NE + + P +PR +L AE+ V+ GG VLRLAGLYT++RG HT+WL+KG + A + ++NL+HYEDAA +A + + GR+ L DN PL+R+++ + QS GKY+ FK + T LGK D S +RA + GW PKYPSFA F+ ++ Sbjct: 72 SSSSTTIDETSDGLKVQSHVSIGAHDLLIVGPGVLGRLVAEQWRQEH-PESQIFGQTATTTHHDELEKLDIKPFLKGTEFG-------DKFSYVIFCAPPSQSADYAGEVRNAASNWNGKGSFLFTSSSAPYDCFDNGECNEDSPVVPLGKSPRTDVLLKAEKVVLECGGKVLRLAGLYTESRGAHTYWLNKGTIDARPDHILNLIHYEDAASLAVAVM------KKKPGGRIFLGCDNHPLSRQEVMDLMDQS----GKYDQK-FKGFTSTSGPLGKKLDNSRTRAEI-GWEPKYPSFAQFLGVTK 358
BLAST of EWM28039.1 vs. NCBI_GenBank
Match: gi|727447915|ref|XP_010505571.1| (PREDICTED: uncharacterized protein LOC104782361 [Camelina sativa]) HSP 1 Score: 223.402 bits (568), Expect = 1.071e-65 Identity = 121/307 (39.41%), Postives = 181/307 (58.96%), Query Frame = 0 Query: 67 SSISSTVRHTCMDMQASTQ----EKDLLVVGMGTLGRFLGQSWRESFGNDAIIYGETSTDNRHDDLRSIGVKPFMRSERVGTLAEQGHEAFSHVVFCVPPSKNQDYVEEVKEALKLWTGKGGFVFTSSGGVYAEDEGGTVNESAALSP---NPRMSKILAAEEAVIAGGGTVLRLAGLYTQTRGPHTFWLSKGEVGATEEGLINLLHYEDAARATMAALLHHHEKADQNFGRVLLISDNQPLTRKQICEAAVQSPFFRGKYEMPIFKRPSDTPRSLGKVYDTSASRAALGGWTPKYPSFAVFMASSR 366 SS ++T+ T ++ + DLL+VG G LGR + + WR+ ++ I+G+T+T HD+L + +KPF++ G + FS+++FC PPS++ DY EV+ A W GKG F+FTSS Y + G NE + + P +PR +L AE+ V+ GGTVLRLAGLYT++RG HT+WL+KG + A + ++NL+HYEDAA +A + ++ GR+ L DN PL+R+ + + QS GKY+ FK + T LGK D S +RA + GW PKYPSFA F+ ++ Sbjct: 114 SSSTTTIDETSDGLKVQSHVSIGANDLLIVGPGVLGRLVAEQWRQEH-PESQIFGQTATTTHHDELEMLDIKPFLKGTEFG-------DKFSYLIFCAPPSQSPDYAGEVRNAASNWNGKGSFLFTSSSAPYDCFDNGECNEDSPVVPLGKSPRTDVLLKAEKVVLECGGTVLRLAGLYTESRGAHTYWLNKGTIDACPDHIVNLIHYEDAASLAVAVM------KKKSGGRIFLGCDNHPLSRQDVMDLMNQS----GKYDQK-FKGFTSTSGPLGKKLDNSRTRAEI-GWKPKYPSFAQFLGVAK 400
BLAST of EWM28039.1 vs. NCBI_GenBank
Match: gi|727454415|ref|XP_010509073.1| (PREDICTED: uncharacterized protein LOC104785539 [Camelina sativa]) HSP 1 Score: 220.705 bits (561), Expect = 2.477e-65 Identity = 117/282 (41.49%), Postives = 170/282 (60.28%), Query Frame = 0 Query: 88 DLLVVGMGTLGRFLGQSWRESFGNDAIIYGETSTDNRHDDLRSIGVKPFMRSERVGTLAEQGHEAFSHVVFCVPPSKNQDYVEEVKEALKLWTGKGGFVFTSSGGVYAEDEGGTVNESAALSP---NPRMSKILAAEEAVIAGGGTVLRLAGLYTQTRGPHTFWLSKGEVGATEEGLINLLHYEDAARATMAALLHHHEKADQNFGRVLLISDNQPLTRKQICEAAVQSPFFRGKYEMPIFKRPSDTPRSLGKVYDTSASRAALGGWTPKYPSFAVFMASSR 366 DLL+VG G LGR + Q WR+ ++ I+G+T+T HD+L + +KPF++ G + FS+V+FC PPS++ DY EV+ A W GKG F+FTSS Y + G NE + + P +PR +L AE+ V+ GGTVLRLAGLYT++RG HT+WL+K + A + ++NL+HYEDAA ++ + + GR+ L DN PL+R+++ + QS GKY+ FK + T LGK D S +RA + GW PKYPSFA F+ ++ Sbjct: 93 DLLIVGPGVLGRLVAQQWRQEH-PESQIFGQTATTTHHDELEKLDIKPFLKGTEFG-------DKFSYVIFCAPPSQSPDYAGEVRNAASNWNGKGSFLFTSSSAPYDCFDNGECNEDSPVVPLGKSPRTDVLLKAEKVVLECGGTVLRLAGLYTESRGAHTYWLNKSTIDARPDHILNLIHYEDAASLAVSVM------KKKPGGRIFLGCDNHPLSRQEVMDLMDQS----GKYDQK-FKGFTSTSGPLGKKLDNSRTRAEI-GWEPKYPSFAQFLGVAK 354
BLAST of EWM28039.1 vs. NCBI_GenBank
Match: gi|1190980993|ref|XP_020885797.1| (uncharacterized protein LOC9317695 [Arabidopsis lyrata subsp. lyrata]) HSP 1 Score: 219.935 bits (559), Expect = 4.394e-65 Identity = 125/308 (40.58%), Postives = 178/308 (57.79%), Query Frame = 0 Query: 65 LDSSISSTVRHTCMDMQASTQ----EKDLLVVGMGTLGRFLGQSWRESFGNDAIIYGETSTDNRHDDLRSIGVKPFMRSERVGTLAEQGHEAFSHVVFCVPPSKNQDYVEEVKEALKLWTGKGGFVFTSSGGVYAEDEGGTVNESAALSP---NPRMSKILAAEEAVIAGGGTVLRLAGLYTQTRGPHTFWLSKGEVGATEEGLINLLHYEDAARATMAALLHHHEKADQNFGRVLLISDNQPLTRKQICEAAVQSPFFRGKYEMPIFKRPSDTPRSLGKVYDTSASRAALGGWTPKYPSFAVFMASS 365 + +S SST+ T ++ + DLL+VG G LGR + + WR+ I+ G+T T N HD+L +G+KP ++ G FS+V+FC PPS++ DY EV+ A W G+G F+FTSS Y + G NE + + P +PR +L AE+ V+ GGTVLRLAGLYT+TRG HT+WLSKG V A + ++NL+HYEDAA +A + + GR+ L DN PL+R+++ + QS GKY+ F+ + T LGK + S +RA + GW PKYPSFA F+ S Sbjct: 62 IQASSSSTIGETSDGLKVQSHVSIGANDLLIVGPGVLGRLVAEQWRQEHPECQIV-GQTVTTNHHDELEKLGIKPSLKGTEYGG-------KFSYVIFCAPPSQSADYAGEVRNAASNWNGEGSFLFTSSSAPYDCFDNGECNEDSPVVPLGKSPRTDVLLKAEKVVLECGGTVLRLAGLYTETRGAHTYWLSKGTVDARPDHILNLIHYEDAASLAVAIM------KKKPGGRIFLGCDNHPLSRQEVMDLMDQS----GKYDKK-FEGFTSTSGPLGKKLNNSKTRAEI-GWEPKYPSFAQFLGVS 349
BLAST of EWM28039.1 vs. NCBI_GenBank
Match: gi|922454465|ref|XP_013629629.1| (PREDICTED: uncharacterized protein LOC106335604 [Brassica oleracea var. oleracea]) HSP 1 Score: 219.55 bits (558), Expect = 6.847e-65 Identity = 133/343 (38.78%), Postives = 189/343 (55.10%), Query Frame = 0 Query: 31 LASLHLMLTRSTVGVFAFVLATPHRSLAKVHSLILDSSISSTVRHTCMDMQASTQ----EKDLLVVGMGTLGRFLGQSWRESFGNDAIIYGETSTDNRHDDLRSIGVKPFMRSERVGTLAEQGHEAFSHVVFCVPPSKNQDYVEEVKEALKLWTGKGGFVFTSSGGVYAEDEGGTVNESAALSP---NPRMSKILAAEEAVIAGGGTVLRLAGLYTQTRGPHTFWLSKGEVGATEEGLINLLHYEDAARATMAALLHHHEKADQNFGRVLLISDNQPLTRKQICEAAVQSPFFRGKYEMPIFKRPSDTPRSLGKVYDTSASRAALGGWTPKYPSFAVFMASSR 366 L SL L L R F+ L+T V + SS SST+ T ++ + DLL+VG G LGR + + WRE + I+G+T T N HD+L +G+KP ++ FS+V+FC PPS++ DY E++ A W G+G F+FTSS Y + G NE + + P +PR +L AE+ V+ GGTVLRLAGLYT+TRG HT+WLSK V A + ++NL+HYEDAA +A + + GR+ + DN PL+R+++ + QS GKY+ FK + T LGK + S +R + GW PKYPSFA F+ S+ Sbjct: 30 LYSLKLALRREDKPSFSLSLSTCSIMATPVQAY---SSSSSTIGETSDGLKVQSHVSIGASDLLIVGPGVLGRLVAEKWREEH-PECQIFGQTVTTNHHDELEKLGIKPSLKQTEFDG-------KFSYVIFCAPPSQSPDYAAELRMAASKWNGEGSFLFTSSSAPYDCFDNGECNEDSPVVPLGKSPRTDVLLRAEQVVLESGGTVLRLAGLYTETRGAHTYWLSKETVDARPDHILNLIHYEDAASLAVAIM------KKKPGGRIFVGCDNHPLSRQEVMDLMDQS----GKYDKK-FKGFTSTSGPLGKKLNNSRTREEI-GWEPKYPSFAQFLGVSK 349
BLAST of EWM28039.1 vs. NCBI_GenBank
Match: gi|1072931926|ref|XP_018476629.1| (PREDICTED: uncharacterized protein LOC108847792 [Raphanus sativus]) HSP 1 Score: 219.164 bits (557), Expect = 9.792e-65 Identity = 129/332 (38.86%), Postives = 185/332 (55.72%), Query Frame = 0 Query: 38 LTRSTVGVFAFVLATPHRSLAKVHSLILDSSISSTVRHTCMDMQASTQEKDLLVVGMGTLGRFLGQSWRESFGNDAIIYGETSTDNRHDDLRSIGVKPFMRSERVGTLAEQGHEAFSHVVFCVPPSKNQDYVEEVKEALKLWTGKGGFVFTSSGGVYAEDEGGTVNESAALSP---NPRMSKILAAEEAVIAGGGTVLRLAGLYTQTRGPHTFWLSKGEVGATEEGLINLLHYEDAARATMAALLHHHEKADQNFGRVLLISDNQPLTRKQICEAAVQSPFFRGKYEMPIFKRPSDTPRSLGKVYDTSASRAALGGWTPKYPSFAVFMASSR 366 L R +F+ L+T + V + S+I T + S DLL+VG G LGR + + WRE D I+G+T+T N HD+L +G+KP ++ S+V+FC PPS++ DY E++ A W G+G F+FTSS Y + G NE + + P +PR +L AE+ V+ GGTVLRLAGLYT+TRG HT+WLSK V A + ++NL+HYEDAA +A + +KA GR+ + DN PL+R+++ + QS GKY+ FK + T LGK + S +R + GW PKYPSFA F+ S+ Sbjct: 37 LRRKDKPIFSLSLSTSSIMASPVQASSSSSTIGETSDGLKVQFHVSIGANDLLIVGPGVLGRLVAEKWREEH-PDCQIFGQTATTNHHDELEKLGIKPSLKETEFDGKC-------SYVIFCAPPSQSPDYAAELRMAASKWNGEGSFLFTSSSAPYDCFDNGECNEDSPVVPLGKSPRTDVLLRAEQVVLESGGTVLRLAGLYTETRGAHTYWLSKETVDARPDHILNLIHYEDAASLAVAIM---KKKAG---GRIFVGCDNHPLSRQEVMDLMDQS----GKYDKK-FKGFTSTSGPLGKKLNNSRTREEI-GWEPKYPSFAQFLGISK 348
BLAST of EWM28039.1 vs. NCBI_GenBank
Match: gi|567214400|ref|XP_006411132.1| (hypothetical protein EUTSA_v10016876mg [Eutrema salsugineum] >gi|557112301|gb|ESQ52585.1| hypothetical protein EUTSA_v10016876mg [Eutrema salsugineum]) HSP 1 Score: 217.238 bits (552), Expect = 4.895e-64 Identity = 137/356 (38.48%), Postives = 193/356 (54.21%), Query Frame = 0 Query: 14 SAALSDKFSVPGCFLLFLASLHLMLTRSTVGVFAFVLATPHRSLAKVHSLILDSSISSTVRHTCMDMQASTQEKDLLVVGMGTLGRFLGQSWRESFGNDAIIYGETSTDNRHDDLRSIGVKPFMRSERVGTLAEQGHEAFSHVVFCVPPSKNQDYVEEVKEALKLWTGKGGFVFTSSGGVYAEDEGGTVNESAALSP---NPRMSKILAAEEAVIAGGGTVLRLAGLYTQTRGPHTFWLSKGEVGATEEGLINLLHYEDAARATMAALLHHHEKADQNFGRVLLISDNQPLTRKQICEAAVQSPFFRGKYEMPIFKRPSDTPRSLGKVYDTSASRAALGGWTPKYPSFAVFMASSR 366 S S + ++P LL A L R F+ L+T + + S+I T + S DLL+VG G LGR + + WRE D I+G+T T N H +L +G+KP ++ GT E FS+V+FC PPS++ DY E++ A W +G F+FTSS Y + G NE + + P +PR +L AE+ V+ GGTVLRLAGLYT+TRG HT+WLSK V A + ++NL+HYEDAA +A + +KA GR+ L DN PL+R+++ + QS GKY+ FK + T LGK + S +R + GW PKYPSFA F+ S+ Sbjct: 18 STHFSKQLTLPSSCLLNFA-----LRREDKPNFSLSLSTSSIMATPIQASSSSSTIDETSDGLKVQPPVSIGANDLLIVGPGVLGRLVAEKWREVHA-DCQIFGQTVTTNHHAELEKLGIKPSLK----GTEFEG---KFSYVIFCAPPSQSPDYAAELRMAASKWNSEGSFLFTSSSAPYNCFDNGECNEESPVVPLGKSPRTDVLLKAEKVVLECGGTVLRLAGLYTETRGAHTYWLSKETVDARPDHILNLIHYEDAASLAVAIM---KKKAG---GRIFLGCDNHPLSRQEVMDLMAQS----GKYDKK-FKGFTSTSGPLGKKLNNSRTREEI-GWEPKYPSFAQFLGVSK 348
BLAST of EWM28039.1 vs. NCBI_GenBank
Match: gi|923861479|ref|XP_013706633.1| (PREDICTED: uncharacterized protein LOC106410635 [Brassica napus]) HSP 1 Score: 216.853 bits (551), Expect = 8.700e-64 Identity = 132/345 (38.26%), Postives = 190/345 (55.07%), Query Frame = 0 Query: 31 LASLHLMLTRSTVGVFAF------VLATPHRSLAKVHSLILDSSISSTVRHTCMDMQASTQEKDLLVVGMGTLGRFLGQSWRESFGNDAIIYGETSTDNRHDDLRSIGVKPFMRSERVGTLAEQGHEAFSHVVFCVPPSKNQDYVEEVKEALKLWTGKGGFVFTSSGGVYAEDEGGTVNESAALSP---NPRMSKILAAEEAVIAGGGTVLRLAGLYTQTRGPHTFWLSKGEVGATEEGLINLLHYEDAARATMAALLHHHEKADQNFGRVLLISDNQPLTRKQICEAAVQSPFFRGKYEMPIFKRPSDTPRSLGKVYDTSASRAALGGWTPKYPSFAVFMASSR 366 L SL L L R F+ ++ATP ++ + S I ++S V+ S DLL+VG G LGR + + WRE + I+G+T T N HD+L +G+KP ++ FS+V+FC PPS++ DY E++ A W G+G F+FTSS Y + G NE + + P +PR +L AE+ V+ GGTVLRLAGLYT+TRG HT+WLSK V A + ++NL+HYEDAA +A + + GR+ + DN PL+R+++ + QS GKY+ FK + T LGK + S +R + GW PKYPSFA F+ S+ Sbjct: 30 LYSLKLALRREDKPSFSLSLSTCSIMATPVQASSSSSSTIGETSDGLKVQS-----HVSIGASDLLIVGPGVLGRLVAEKWREEH-PECQIFGQTVTTNHHDELEKLGIKPSLKQTEFDG-------KFSYVIFCAPPSQSPDYAAELRMAASKWNGEGSFLFTSSSAPYDCFDNGECNEDSPVVPLGKSPRTDVLLRAEQVVLESGGTVLRLAGLYTETRGAHTYWLSKETVDARPDHILNLIHYEDAASLAVAIM------KKKPGGRIFVGCDNHPLSRQEVMDLMDQS----GKYDKK-FKGFTSTSGPLGKKLNNSRTREEI-GWEPKYPSFAQFLGVSK 349 The following BLAST results are available for this feature:
BLAST of EWM28039.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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