EWM30645.1, cds27 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM30645.1 vs. NCBI_GenBank
Match: gi|585113335|gb|EWM30645.1| (hypothetical protein Naga_101463g3, partial [Nannochloropsis gaditana]) HSP 1 Score: 347.436 bits (890), Expect = 5.143e-121 Identity = 173/173 (100.00%), Postives = 173/173 (100.00%), Query Frame = 0
Query: 1 MEDSPGHQDGESSGLRDSSQPVCTFKKPVFKKKGAKQQNKRARKQASDSGSGSSSEEAEESVLLRKQQSNNTRGVISTTATKSSVLHTYASTGTASPLAVAGGATYTSEIDTEHDRDNRAMMEMALRAQQEEEDASGAGGEKIYRGQVRREGGREVGREVGREGEREGGREGG 173
MEDSPGHQDGESSGLRDSSQPVCTFKKPVFKKKGAKQQNKRARKQASDSGSGSSSEEAEESVLLRKQQSNNTRGVISTTATKSSVLHTYASTGTASPLAVAGGATYTSEIDTEHDRDNRAMMEMALRAQQEEEDASGAGGEKIYRGQVRREGGREVGREVGREGEREGGREGG
Sbjct: 1 MEDSPGHQDGESSGLRDSSQPVCTFKKPVFKKKGAKQQNKRARKQASDSGSGSSSEEAEESVLLRKQQSNNTRGVISTTATKSSVLHTYASTGTASPLAVAGGATYTSEIDTEHDRDNRAMMEMALRAQQEEEDASGAGGEKIYRGQVRREGGREVGREVGREGEREGGREGG 173
BLAST of EWM30645.1 vs. NCBI_GenBank
Match: gi|1153712101|ref|XP_020277889.1| (RING finger protein 113A [Pseudomyrmex gracilis]) HSP 1 Score: 60.077 bits (144), Expect = 1.550e-7 Identity = 55/146 (37.67%), Postives = 79/146 (54.11%), Query Frame = 0
Query: 20 QP--VCTFKKPVFKKKGAKQQNKRARKQASDSGSGSSSEEAEESVLLRKQQSNNTRG-VISTTATK---------------SSVLHTYASTGTASPLAVAG-GATYTSEIDTEHDRDNRAMMEMALRAQQEEEDASGAGGEKIYRG 146
QP CTF +FKK+ K ++ R RK+AS GS SSE+ E+ ++RKQ+ + R +I +T+TK SV +Y S TA P+ + GAT E +TE DRD +A+ E +AQ+ E+ G +KIYRG
Sbjct: 7 QPEKTCTF---LFKKR--KIRSTRQRKEAS--GSNDSSED--ETTVVRKQKKRDNRNPMIQSTSTKEYQEKTNHSDDSSEEDSVTVSYKSNRTALPVGPSDQGATAVLETETEKDRDAQALFE---KAQKINEELEGKEDDKIYRG 140 The following BLAST results are available for this feature:
BLAST of EWM30645.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 2
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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