EWM30366.1, cds269 (CDS) Nannochloropsis gaditana

Overview
NameEWM30366.1
Unique Namecds269
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002455.1:687607..689037 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM30366.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100026g47.10620.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:687607..689037 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0006810transport
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
GO:0005634nucleus
Homology
BLAST of EWM30366.1 vs. NCBI_GenBank
Match: gi|585113026|gb|EWM30366.1| (hypothetical protein Naga_100026g47 [Nannochloropsis gaditana])

HSP 1 Score: 985.712 bits (2547), Expect = 0.000e+0
Identity = 476/476 (100.00%), Postives = 476/476 (100.00%), Query Frame = 0
Query:    1 MQHLTDASPQQRPYPKSKLISSSSSRDKRRSSVLQRQRAARRELTDSLRALHRDTIAEDDVDSMTRSGNGSQLYESDVIQEDDGMMVDGQGQVQAEKIALRRKRARARQATIYANRFAIPEWMIEIPHDLHPTGGGGGWLVMPQPMGKRCLMAATGGLTLTRMTSGEVLHRLASPLPNGSAWAKGPKNGWTLLDCVYQESSRTYYVLDLLCWRKMELYDCACDFRLFFLRSKFAEEMEHRAGAILMHGTDASNETFHLELLPWYECHRTGLQMLRSASFPFEQDGFLFWNKEGYVQAGLTPLILLWKDAHSSHSLYRDSLLPRWSAVLSVRLCEDPGEGKTQDYLLLTLEGLAVGSVTRDEFHRWSRSQEQGEAGSIGGEGDIEGEGFLVCFWYEEATEDETSQEHRLHGLTYRRICVPSSETADCWSKLLFQSRVKRGMEGGAVTFDMLLCDVEREIAHTGTLREGMIQARGSEK 476
            MQHLTDASPQQRPYPKSKLISSSSSRDKRRSSVLQRQRAARRELTDSLRALHRDTIAEDDVDSMTRSGNGSQLYESDVIQEDDGMMVDGQGQVQAEKIALRRKRARARQATIYANRFAIPEWMIEIPHDLHPTGGGGGWLVMPQPMGKRCLMAATGGLTLTRMTSGEVLHRLASPLPNGSAWAKGPKNGWTLLDCVYQESSRTYYVLDLLCWRKMELYDCACDFRLFFLRSKFAEEMEHRAGAILMHGTDASNETFHLELLPWYECHRTGLQMLRSASFPFEQDGFLFWNKEGYVQAGLTPLILLWKDAHSSHSLYRDSLLPRWSAVLSVRLCEDPGEGKTQDYLLLTLEGLAVGSVTRDEFHRWSRSQEQGEAGSIGGEGDIEGEGFLVCFWYEEATEDETSQEHRLHGLTYRRICVPSSETADCWSKLLFQSRVKRGMEGGAVTFDMLLCDVEREIAHTGTLREGMIQARGSEK
Sbjct:    1 MQHLTDASPQQRPYPKSKLISSSSSRDKRRSSVLQRQRAARRELTDSLRALHRDTIAEDDVDSMTRSGNGSQLYESDVIQEDDGMMVDGQGQVQAEKIALRRKRARARQATIYANRFAIPEWMIEIPHDLHPTGGGGGWLVMPQPMGKRCLMAATGGLTLTRMTSGEVLHRLASPLPNGSAWAKGPKNGWTLLDCVYQESSRTYYVLDLLCWRKMELYDCACDFRLFFLRSKFAEEMEHRAGAILMHGTDASNETFHLELLPWYECHRTGLQMLRSASFPFEQDGFLFWNKEGYVQAGLTPLILLWKDAHSSHSLYRDSLLPRWSAVLSVRLCEDPGEGKTQDYLLLTLEGLAVGSVTRDEFHRWSRSQEQGEAGSIGGEGDIEGEGFLVCFWYEEATEDETSQEHRLHGLTYRRICVPSSETADCWSKLLFQSRVKRGMEGGAVTFDMLLCDVEREIAHTGTLREGMIQARGSEK 476          
BLAST of EWM30366.1 vs. NCBI_GenBank
Match: gi|553196049|ref|XP_005856257.1| (snurportin-1, partial [Nannochloropsis gaditana CCMP526] >gi|422292802|gb|EKU20104.1| snurportin-1, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 303.138 bits (775), Expect = 4.268e-99
Identity = 144/145 (99.31%), Postives = 145/145 (100.00%), Query Frame = 0
Query:  217 LYDCACDFRLFFLRSKFAEEMEHRAGAILMHGTDASNETFHLELLPWYECHRTGLQMLRSASFPFEQDGFLFWNKEGYVQAGLTPLILLWKDAHSSHSLYRDSLLPRWSAVLSVRLCEDPGEGKTQDYLLLTLEGLAVGSVTRDE 361
            +YDCACDFRLFFLRSKFAEEMEHRAGAILMHGTDASNETFHLELLPWYECHRTGLQMLRSASFPFEQDGFLFWNKEGYVQAGLTPLILLWKDAHSSHSLYRDSLLPRWSAVLSVRLCEDPGEGKTQDYLLLTLEGLAVGSVTRDE
Sbjct:    1 MYDCACDFRLFFLRSKFAEEMEHRAGAILMHGTDASNETFHLELLPWYECHRTGLQMLRSASFPFEQDGFLFWNKEGYVQAGLTPLILLWKDAHSSHSLYRDSLLPRWSAVLSVRLCEDPGEGKTQDYLLLTLEGLAVGSVTRDE 145          
BLAST of EWM30366.1 vs. NCBI_GenBank
Match: gi|953497077|emb|CEG41386.1| (m3G-cap-specific nuclear import receptor (Snurportin1) [Plasmopara halstedii])

HSP 1 Score: 228.794 bits (582), Expect = 9.413e-67
Identity = 139/427 (32.55%), Postives = 218/427 (51.05%), Query Frame = 0
Query:   29 RRSSVLQRQRAARRELTDSLRAL--HRDTIAEDDVDSMTRSGNGSQLYESDVIQEDDGMMVDGQGQVQAEKIALRRKRARARQATIYANRFAIPEWMIEIPHDLHPTGG--GGGWLVMPQPMGKRCLMAATGGLTLTRMTSGEVLHRLASPLPNGSAWAKGPKNGWTLLDCVYQESSRTYYVLDLLCWRKMELYDCACDFRLFFLRSKFAEEMEHRAGAILMHGTDASNETFHLELLPWYECHRTGLQMLRSASFPFEQDGFLFWNKEGYVQAGLTPLILLWKDAHSSHSLYRDSLLPRWSAVLSVRLCEDPGEGKTQDYLLLTLEGLAVGSVTRDEFHRWSRSQEQGEAGSIGGEGDIEGEGFLVCFWYEEATEDETSQEHRLHGLTYRRICVPSSETADCWSKLLFQSRVKRGMEGGAVTFDMLL 451
            RR + L +QR ARR+LT   R L  H D++A  D D  T              +  D +    + + + +++  RR+         Y+ +   PEW++++P DL+  G   G GW V+P+P GKRCL+ A GG T+ R+ SG +L++  S LP GS       +G+ +LDC+YQE + T+YVLD++CW+   LY+C  +FRL+++R K +E +           T +S   F    +P YEC + G+    S  +PF +DG LF+ K G+ + GL+PL L+WKD+ +S   +  S  P  S VL +           Q+   LTLEG+A+ +  +   H++  S                 EG L  F Y++  ED+  Q   L G+T+ + C P     D W+K+LFQ + +     G VT + +L
Sbjct:   18 RRQTTLVQQRKARRDLTAHARRLAQHEDSLANHDRDEGT--------------EPMDDIASVSKRRTREDRVKQRRE--------YYSKQLMTPEWLLDVPKDLNGMGSALGEGWYVLPRPEGKRCLVVANGGNTIARIPSGNILNKFPSALPCGSYKTNKSSDGYCILDCIYQEQNETFYVLDIMCWKGYLLYNCTSEFRLYWMRDKLSEGLT---------ATVSSANPFRFLPIPCYECDQAGIMAAYSTMYPFHKDGLLFYMKAGHYEMGLSPLALVWKDSMTSR--FFSSTKP--SIVLRLE----------QNNEFLTLEGIALFAADQQYIHQFELS-----------------EGDLASFSYDQY-EDDDKQPPHLTGMTFVKRCSPLRALPDSWTKILFQLKTR----SGGVTIEQIL 377          
BLAST of EWM30366.1 vs. NCBI_GenBank
Match: gi|566012418|gb|ETI35329.1| (hypothetical protein F443_18322 [Phytophthora parasitica P1569] >gi|566012419|gb|ETI35330.1| hypothetical protein, variant 1 [Phytophthora parasitica P1569] >gi|567949859|gb|ETK75584.1| hypothetical protein L915_17835 [Phytophthora parasitica] >gi|567949860|gb|ETK75585.1| hypothetical protein, variant 1 [Phytophthora parasitica] >gi|567949861|gb|ETK75586.1| hypothetical protein, variant 2 [Phytophthora parasitica] >gi|567949862|gb|ETK75587.1| hypothetical protein, variant 3 [Phytophthora parasitica] >gi|568008027|gb|ETL82252.1| hypothetical protein L917_17564 [Phytophthora parasitica] >gi|568008028|gb|ETL82253.1| hypothetical protein, variant 1 [Phytophthora parasitica] >gi|570316125|gb|ETO64073.1| hypothetical protein F444_18343 [Phytophthora parasitica P1976] >gi|570316126|gb|ETO64074.1| hypothetical protein, variant 1 [Phytophthora parasitica P1976] >gi|570970185|gb|ETP33304.1| hypothetical protein F442_18151 [Phytophthora parasitica P10297] >gi|570970186|gb|ETP33305.1| hypothetical protein, variant 1 [Phytophthora parasitica P10297])

HSP 1 Score: 214.927 bits (546), Expect = 1.741e-61
Identity = 137/413 (33.17%), Postives = 207/413 (50.12%), Query Frame = 0
Query:   29 RRSSVLQRQRAARRELTDSLRALHRDTIAEDDVDSMTRSGNGSQLYESDVIQEDDGMMVDGQGQVQAEKIALRRKRARARQATIYANRFAIPEWMIEIPHDLHPTGG--GGGWLVMPQPMGKRCLMAATGGLTLTRMTSGEVLHRLASPLPNGSAWAKGPKNGWTLLDCVYQESSRTYYVLDLLCWRKMELYDCACDFRLFFLRSKFAEEMEHRAGAILMHGTDASNETFHLELLPWYECHRTGLQMLRSASFPFEQDGFLFWNKEGYVQAGLTPLILLWKDAHSSHSLYRDSLLPRWSAVLSVRLCEDPGEGKTQDYLLLTLEGLAVGSVTRDEFHRWSRSQEQGEAGSIGGEGDIEGEGFLVCFWYEEATEDETSQEHRLHGLTYRRICVPSSETADCWSKLLFQSRVKRG 439
            RR   L +QR ARR+LT   R L     A+         G  +Q         D  +    + + + E++  RR+         ++ +   PEW+I+IP DL+  G   G GW V+P+P GKRCL+ A GG T+ R+ SG +L +  S LP GS       +G+ +LDC++QE + T+YVLD++CW+   LY+C  +FRL+++R K +E      GA    G  A    F    +P YE  + G+    S ++PF +DG LF+ K G+ + GL+PL L+WKDA++S           +SA  S+ L     EG   D   +TLEG+A+ +  +D                   E ++  EG L  F +E+   DE+   H L GLT+ + C P     D W+K+LFQ   + G
Sbjct:   19 RRRETLAQQRQARRDLTAHARQL-----AQQQEPPSPHGGEDAQPM-------DGVISATSKRRTREERVKQRREH--------FSKQLMTPEWLIDIPKDLNGNGSLLGEGWYVLPRPEGKRCLVVANGGNTIARIPSGSILKKFPSALPCGSHKTNKSNDGYCILDCIFQEQNETFYVLDVMCWKGYLLYNCTTEFRLYWMRDKLSE------GAT---GMTAPANPFRFLPVPSYESDQEGIMAAYSTTYPFLKDGLLFYMKAGHYEMGLSPLALVWKDANTSRFFV-------YSAKPSIVL---RFEG---DNEFVTLEGIALFTANQDFIQ----------------EHEL-NEGDLASFSFEQTEVDESQTPH-LTGLTFVKRCSPQRALPDSWTKILFQYNARSG 371          
BLAST of EWM30366.1 vs. NCBI_GenBank
Match: gi|970636299|gb|KUF80976.1| (Snurportin-1 [Phytophthora nicotianae])

HSP 1 Score: 214.542 bits (545), Expect = 1.754e-61
Identity = 137/413 (33.17%), Postives = 207/413 (50.12%), Query Frame = 0
Query:   29 RRSSVLQRQRAARRELTDSLRALHRDTIAEDDVDSMTRSGNGSQLYESDVIQEDDGMMVDGQGQVQAEKIALRRKRARARQATIYANRFAIPEWMIEIPHDLHPTGG--GGGWLVMPQPMGKRCLMAATGGLTLTRMTSGEVLHRLASPLPNGSAWAKGPKNGWTLLDCVYQESSRTYYVLDLLCWRKMELYDCACDFRLFFLRSKFAEEMEHRAGAILMHGTDASNETFHLELLPWYECHRTGLQMLRSASFPFEQDGFLFWNKEGYVQAGLTPLILLWKDAHSSHSLYRDSLLPRWSAVLSVRLCEDPGEGKTQDYLLLTLEGLAVGSVTRDEFHRWSRSQEQGEAGSIGGEGDIEGEGFLVCFWYEEATEDETSQEHRLHGLTYRRICVPSSETADCWSKLLFQSRVKRG 439
            RR   L +QR ARR+LT   R L     A+         G  +Q         D  +    + + + E++  RR+         ++ +   PEW+I+IP DL+  G   G GW V+P+P GKRCL+ A GG T+ R+ SG +L +  S LP GS       +G+ +LDC++QE + T+YVLD++CW+   LY+C  +FRL+++R K +E      GA    G  A    F    +P YE  + G+    S ++PF +DG LF+ K G+ + GL+PL L+WKDA++S           +SA  S+ L     EG   D   +TLEG+A+ +  +D                   E ++  EG L  F +E+   DE+   H L GLT+ + C P     D W+K+LFQ   + G
Sbjct:   19 RRRETLAQQRQARRDLTAHARQL-----AQQQEPPSPHGGEDAQ-------PMDGVISATSKRRTREERVKQRREH--------FSKQLMTPEWLIDIPKDLNGNGSLLGEGWYVLPRPEGKRCLVVANGGNTIARIPSGSILKKFPSALPCGSHKTNKSNDGYCILDCIFQEQNETFYVLDVMCWKGYLLYNCTTEFRLYWMRDKLSE------GAT---GMTAPANPFRFLPVPSYESDQEGIMAAYSTTYPFLKDGLLFYMKAGHYEMGLSPLALVWKDANTSRFFV-------YSAKPSIVLR---FEG---DNEFVTLEGIALFTANQDFIQ----------------EHEL-NEGDLASFSFEQTEVDESQTPH-LTGLTFVKRCSPQRALPDSWTKILFQYNARSG 371          
BLAST of EWM30366.1 vs. NCBI_GenBank
Match: gi|675208187|ref|XP_008912978.1| (hypothetical protein PPTG_17099 [Phytophthora parasitica INRA-310] >gi|675208189|ref|XP_008912979.1| hypothetical protein, variant 1 [Phytophthora parasitica INRA-310] >gi|675208191|ref|XP_008912980.1| hypothetical protein, variant 2 [Phytophthora parasitica INRA-310] >gi|675208193|ref|XP_008912981.1| hypothetical protein, variant 3 [Phytophthora parasitica INRA-310] >gi|568086782|gb|ETN01663.1| hypothetical protein PPTG_17099 [Phytophthora parasitica INRA-310] >gi|568086783|gb|ETN01664.1| hypothetical protein, variant 1 [Phytophthora parasitica INRA-310] >gi|568086784|gb|ETN01665.1| hypothetical protein, variant 2 [Phytophthora parasitica INRA-310] >gi|568086785|gb|ETN01666.1| hypothetical protein, variant 3 [Phytophthora parasitica INRA-310])

HSP 1 Score: 214.927 bits (546), Expect = 2.041e-61
Identity = 137/413 (33.17%), Postives = 207/413 (50.12%), Query Frame = 0
Query:   29 RRSSVLQRQRAARRELTDSLRALHRDTIAEDDVDSMTRSGNGSQLYESDVIQEDDGMMVDGQGQVQAEKIALRRKRARARQATIYANRFAIPEWMIEIPHDLHPTGG--GGGWLVMPQPMGKRCLMAATGGLTLTRMTSGEVLHRLASPLPNGSAWAKGPKNGWTLLDCVYQESSRTYYVLDLLCWRKMELYDCACDFRLFFLRSKFAEEMEHRAGAILMHGTDASNETFHLELLPWYECHRTGLQMLRSASFPFEQDGFLFWNKEGYVQAGLTPLILLWKDAHSSHSLYRDSLLPRWSAVLSVRLCEDPGEGKTQDYLLLTLEGLAVGSVTRDEFHRWSRSQEQGEAGSIGGEGDIEGEGFLVCFWYEEATEDETSQEHRLHGLTYRRICVPSSETADCWSKLLFQSRVKRG 439
            RR   L +QR ARR+LT   R L     A+         G  +Q         D  +    + + + E++  RR+         ++ +   PEW+I+IP DL+  G   G GW V+P+P GKRCL+ A GG T+ R+ SG +L +  S LP GS       +G+ +LDC++QE + T+YVLD++CW+   LY+C  +FRL+++R K +E      GA    G  A    F    +P YE  + G+    S ++PF +DG LF+ K G+ + GL+PL L+WKDA++S           +SA  S+ L     EG   D   +TLEG+A+ +  +D                   E ++  EG L  F +E+   DE+   H L GLT+ + C P     D W+K+LFQ   + G
Sbjct:   19 RRRETLAQQRQARRDLTAHARQL-----AQQQEPPSPHGGEDAQPM-------DGVISATSKRRTREERVKQRREH--------FSKQLMTPEWLIDIPKDLNGNGSLLGEGWYVLPRPEGKRCLVVANGGNTIARIPSGSILKKFPSALPCGSHKTNKSNDGYCILDCIFQEQNETFYVLDVMCWKGYLLYNCTTEFRLYWMRDKLSE------GAT---GMTAPANPFRFLPVPSYESDQEGIMAAYSTTYPFLKDGLLFYMKAGHYEMGLSPLALVWKDANTSRFFV-------YSAKPSIVLR---FEG---DNEFVTLEGIALFTANQDFIQ----------------EHEL-NEGDLASFSFEQTEVDESQTPH-LTGLTFVKRCSPQRALPDSWTKILFQYNARSG 371          
BLAST of EWM30366.1 vs. NCBI_GenBank
Match: gi|567978528|gb|ETL29015.1| (hypothetical protein L916_17736 [Phytophthora parasitica] >gi|567978529|gb|ETL29016.1| hypothetical protein, variant 1 [Phytophthora parasitica] >gi|567978530|gb|ETL29017.1| hypothetical protein, variant 2 [Phytophthora parasitica] >gi|567978531|gb|ETL29018.1| hypothetical protein, variant 3 [Phytophthora parasitica] >gi|568037915|gb|ETM35464.1| hypothetical protein L914_17646 [Phytophthora parasitica] >gi|568037916|gb|ETM35465.1| hypothetical protein, variant 1 [Phytophthora parasitica] >gi|570939897|gb|ETP05154.1| hypothetical protein F441_18198 [Phytophthora parasitica CJ01A1] >gi|570939898|gb|ETP05155.1| hypothetical protein, variant 1 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 214.542 bits (545), Expect = 2.152e-61
Identity = 137/413 (33.17%), Postives = 207/413 (50.12%), Query Frame = 0
Query:   29 RRSSVLQRQRAARRELTDSLRALHRDTIAEDDVDSMTRSGNGSQLYESDVIQEDDGMMVDGQGQVQAEKIALRRKRARARQATIYANRFAIPEWMIEIPHDLHPTGG--GGGWLVMPQPMGKRCLMAATGGLTLTRMTSGEVLHRLASPLPNGSAWAKGPKNGWTLLDCVYQESSRTYYVLDLLCWRKMELYDCACDFRLFFLRSKFAEEMEHRAGAILMHGTDASNETFHLELLPWYECHRTGLQMLRSASFPFEQDGFLFWNKEGYVQAGLTPLILLWKDAHSSHSLYRDSLLPRWSAVLSVRLCEDPGEGKTQDYLLLTLEGLAVGSVTRDEFHRWSRSQEQGEAGSIGGEGDIEGEGFLVCFWYEEATEDETSQEHRLHGLTYRRICVPSSETADCWSKLLFQSRVKRG 439
            RR   L +QR ARR+LT   R L     A+         G  +Q         D  +    + + + E++  RR+         ++ +   PEW+I+IP DL+  G   G GW V+P+P GKRCL+ A GG T+ R+ SG +L +  S LP GS       +G+ +LDC++QE + T+YVLD++CW+   LY+C  +FRL+++R K +E      GA    G  A    F    +P YE  + G+    S ++PF +DG LF+ K G+ + GL+PL L+WKDA++S           +SA  S+ L     EG   D   +TLEG+A+ +  +D                   E ++  EG L  F +E+   DE+   H L GLT+ + C P     D W+K+LFQ   + G
Sbjct:   19 RRRETLAQQRQARRDLTAHARQL-----AQQQEPPSPHGGEDAQPM-------DGVISATSKRRTREERVKQRREH--------FSKQLMAPEWLIDIPKDLNGNGSLLGEGWYVLPRPEGKRCLVVANGGNTIARIPSGSILKKFPSALPCGSHKTNKSNDGYCILDCIFQEQNETFYVLDVMCWKGYLLYNCTTEFRLYWMRDKLSE------GAT---GMTAPANPFRFLPVPSYESDQEGIMAAYSTTYPFLKDGLLFYMKAGHYEMGLSPLALVWKDANTSRFFV-------YSAKPSIVLR---FEG---DNEFVTLEGIALFTANQDFIQ----------------EHEL-NEGDLASFSFEQTEVDESQTPH-LTGLTFVKRCSPQRALPDSWTKILFQYNARSG 371          
BLAST of EWM30366.1 vs. NCBI_GenBank
Match: gi|325184984|emb|CCA19475.1| (snurportinlike protein putative [Albugo laibachii Nc14])

HSP 1 Score: 197.593 bits (501), Expect = 7.679e-55
Identity = 132/418 (31.58%), Postives = 193/418 (46.17%), Query Frame = 0
Query:   29 RRSSVLQRQRAARRELTDSLRALHRDTIAEDDVDSMTRSGNGSQLYESDVIQEDDGMMVDGQGQVQAE-KIALRRKRARARQATIYANRFAIPEWMIEIPHDLHPTGG--GGGWLVMPQPMGKRCLMAATGGLTLTRMTSGEVLHRLASPLPNGSAWAKGPKNGWTLLDCVYQESSR---TYYVLDLLCWRKMELYDCACDFRLFFLRSKFAEEMEHRAGAILMHGTDASNETFHLELLPWYECHRTGLQMLRSASFPFEQDGFLFWNKEGYVQAGLTPLILLWKDAHSSHSLYRDSLLPRWSAVLS-VRLCEDPGEGKTQDYLLLTLEGLAVGSVTRDEFHRWSRSQEQGEAGSIGGEGDIEGEGFLVCFWYEEATEDETSQEHRLHGLTYRRICVPSSETADCWSKLLFQSRVKRG 439
            RR   LQ+QR A+RELT   R L      E                      E D M +D    V+++ K   R +R RAR+   Y+ +F IPEWMI+IP DL+  G   G GW V+P+P GKRCL+    G+T+ R T+G  L +  S LPNGS       +G+ +LDC+YQ ++     +YVLD+LCW+   LY+C  +FRL++LR K  E               A    +    +P +EC   GL+     SFP+ +DG LF  K  + + GL+P   +WKD H+S  L      P    VL+  R C              T+EG+ + ++               + G +      EG+     F +   + D+T     L G+ + R C P     D W+K++FQ   + G
Sbjct:   18 RRREALQKQRQAQRELTSHARRLAVGCCEE----------------------ESDRMQIDTINDVKSKLKKKTREERVRARKE-YYSTQFMIPEWMIDIPSDLNGKGSTTGEGWYVLPRPEGKRCLVITNNGVTVARKTNGSTLQKFPSALPNGSRKTTSHSDGYCILDCIYQTNADDQGVFYVLDVLCWKGYLLYNCTTEFRLYWLREKLTEGNA---------AVRAPANPYPFLPIPCFECDCGGLETAYKTSFPYIKDGLLFIMKAAHYELGLSPCCTIWKDTHTSRFLVFTE-KPIIVLVLNDQRQCT-------------TMEGIVLYTIE--------------DKGILAHHELREGDLIQFSFEHNVYSPDQTPS---LSGMQFMRRCSPQRALPDSWTKVVFQYNARYG 372          
BLAST of EWM30366.1 vs. NCBI_GenBank
Match: gi|698813950|ref|XP_009840004.1| (hypothetical protein, variant [Aphanomyces astaci] >gi|574105095|gb|ETV70621.1| hypothetical protein, variant [Aphanomyces astaci])

HSP 1 Score: 196.438 bits (498), Expect = 1.099e-54
Identity = 113/318 (35.53%), Postives = 173/318 (54.40%), Query Frame = 0
Query:   20 ISSSSSRDKRRSSVLQRQRAARRELTDSLRALHRDTIAEDDVDSMTRSGNGSQLYESDVIQEDDGMMVDGQGQVQAEKIALRRKRARARQATIYANRFAIPEWMIEIPHDL---HPTGG----GGGWLVMPQPMGKRCLMAATGGLTLTRMTSGEVLHRLASPLPNGSAWAKGPKNGWTLLDCVYQESSRTYYVLDLLCWRKMELYDCACDFRLFFLRSKFAEEMEHRAGAILMHGTDASNETFHLELLPWYECHRTGLQMLRSASFPFEQDGFLFWNKEGYVQAGLTPLILLWKDAHSSHSLYRDSLLPRWSAVLSV 330
            +S+  S++KRR   + RQ+ ARR+LT     +H  ++A   VD+        +L E  +   D  M +        +K   R  R +AR++  ++N+   PEWM+++P  L     T G      GWL +P+P GKRCL+ ++ G T+ R  SG +L +  S LP GS      ++ + +LDC++ E++ T+YVLD++CW+   LYDC+ DFRL++LR K AE    +          ++   +  E +P YEC   GL    S ++PF +DG LF+ K G    GLTPL+LLW+D H+  SLY + L    S VL V
Sbjct:   22 LSADQSQEKRRQDAMDRQKQARRDLT-----MHVRSLALPSVDN--------ELEELTITMMDAEMEISTAASKSRKKT--REDRVKARRSH-FSNQLMHPEWMVDVPSTLVQASSTSGKLDHDDGWLALPRPDGKRCLVISSNGSTVARTISGSILKKFPSTLPCGSRKTNTGQDQYCVLDCIFHEANDTFYVLDVMCWKGYLLYDCSADFRLYWLRDKLAETTASKV---------SNANPYAFEPVPAYECTLDGLDTAYSTTYPFTKDGLLFYCKAGMYTLGLTPLVLLWRDRHT--SLYENQL----SIVLQV 308          
BLAST of EWM30366.1 vs. NCBI_GenBank
Match: gi|673053711|ref|XP_008880816.1| (hypothetical protein, variant [Aphanomyces invadans] >gi|673053713|ref|XP_008880817.1| hypothetical protein H310_14691 [Aphanomyces invadans] >gi|574463496|gb|ETV90566.1| hypothetical protein H310_14691 [Aphanomyces invadans] >gi|574463497|gb|ETV90567.1| hypothetical protein, variant [Aphanomyces invadans])

HSP 1 Score: 197.208 bits (500), Expect = 1.330e-54
Identity = 142/457 (31.07%), Postives = 218/457 (47.70%), Query Frame = 0
Query:   20 ISSSSSRDKRRSSVLQRQRAARRELTDSLRALHRDTIAEDDVDSMTRSGNGSQLYESDVIQEDDGMMVDGQGQVQAEKIALRRK----RARARQATIYANRFAIPEWMIEIPHDL-HPTGGGG-------GWLVMPQPMGKRCLMAATGGLTLTRMTSGEVLHRLASPLPNGSAWAKGPKNGWTLLDCVYQESSRTYYVLDLLCWRKMELYDCACDFRLFFLRSKFAEEMEHRAGAILMHGTDASNETFHLELLPWYECHRTGLQMLRSASFPFEQDGFLFWNKEGYVQAGLTPLILLWKDAHSSHSLYRDSLLPRWSAVLSVRLCEDPGEGKTQDYLLL---TLEGLAVGSVTRDEFHRWSRSQEQGEAGSIGGEGDIEGEGFLVCFWYEEATEDETSQEHRLHGLTYRRICVPSSETADCWSKLLFQSRVKRGMEGGAVTFDMLLCDVEREIAHT 461
            +S   ++++RR   ++RQ+ ARR+LT     +H  ++A   VDS               +++    M+D + +V       R+K    R +AR++  Y+N+   PEWM++IP  L H +           GWLV+P+P GKRCL+ A+ G T+ R  SG VL +  S LP GS      ++ + +LDC++ E+S T+ VLD++CW+   LYDC  DFR ++LR K AE             T  +   +  E +P Y+C   GL    + +F F +DG LF+ K G    GLTPL+LLW+DA +S   Y + L    S VL V   +D     T D++++   T E      V   +  R S      E+   GG+GD+E                       + G  +++ C P    AD W+KL    +        + +F+MLL  V RE  H 
Sbjct:   13 LSMDQNQERRRQDAMERQKQARRDLT-----MHVRSLALPSVDSE--------------LEDLTATMMDAEMEVSMAASKSRKKTREDRVKARRSH-YSNQLMHPEWMVDIPSTLVHASVSSSRQREFDDGWLVLPRPDGKRCLVIASNGSTVARTVSGSVLKKFPSALPCGSRKTNAGQDQYCVLDCIFHEASETFCVLDVMCWKGYLLYDCTVDFRQYWLRDKLAETTA---------ATITNANPYAFEPVPSYDCTVDGLIAAHATTFSFTKDGLLFYCKAGMYTPGLTPLVLLWRDADTSQ--YENQL----SVVLEVD--DDGLACATSDHVVMYTFTPEQAKAEEVVAGDLVRVSV-----ESIEWGGDGDVE-----------------------VTGAVFQKRCSPQRGVADSWTKLAHVGQT-------SCSFEMLL-SVLREDGHV 396          
The following BLAST results are available for this feature:
BLAST of EWM30366.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585113026|gb|EWM30366.1|0.000e+0100.00hypothetical protein Naga_100026g47 [Nannochlorops... [more]
gi|553196049|ref|XP_005856257.1|4.268e-9999.31snurportin-1, partial [Nannochloropsis gaditana CC... [more]
gi|953497077|emb|CEG41386.1|9.413e-6732.55m3G-cap-specific nuclear import receptor (Snurport... [more]
gi|566012418|gb|ETI35329.1|1.741e-6133.17hypothetical protein F443_18322 [Phytophthora para... [more]
gi|970636299|gb|KUF80976.1|1.754e-6133.17Snurportin-1 [Phytophthora nicotianae][more]
gi|675208187|ref|XP_008912978.1|2.041e-6133.17hypothetical protein PPTG_17099 [Phytophthora para... [more]
gi|567978528|gb|ETL29015.1|2.152e-6133.17hypothetical protein L916_17736 [Phytophthora para... [more]
gi|325184984|emb|CCA19475.1|7.679e-5531.58snurportinlike protein putative [Albugo laibachii ... [more]
gi|698813950|ref|XP_009840004.1|1.099e-5435.53hypothetical protein, variant [Aphanomyces astaci]... [more]
gi|673053711|ref|XP_008880816.1|1.330e-5431.07hypothetical protein, variant [Aphanomyces invadan... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna269rna269Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications