EWM27950.1, cds2688 (CDS) Nannochloropsis gaditana

Overview
NameEWM27950.1
Unique Namecds2688
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002459.1:990385..992103 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM27950.1
ProductRibonuclease Zc3h12a-like protein
Orig transcript idgnl|cribi|Naga_100008g67.7842.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:990385..992103 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0006139nucleobase-containing compound metabolic process
Vocabulary: Cellular Component
TermDefinition
GO:0005739mitochondrion
Vocabulary: INTERPRO
TermDefinition
IPR021869RNase_Zc3h12
IPR002885Pentatricopeptide_repeat
Homology
BLAST of EWM27950.1 vs. NCBI_GenBank
Match: gi|585110291|gb|EWM27950.1| (Ribonuclease Zc3h12a-like protein [Nannochloropsis gaditana])

HSP 1 Score: 1178.7 bits (3048), Expect = 0.000e+0
Identity = 572/572 (100.00%), Postives = 572/572 (100.00%), Query Frame = 0
Query:    1 MALKRVYEAAPLNEDVGSKPSASVPPSQSILSESSSSPNAPPQDHNDGSLRQTKRMKRLLASDPAAAERMDYRRRLGLARRDDDIPTALQLFADVQARDIDIGSEGFNALIALLTTFERLEDADQVLTHMRRKHFSLTEATYVCIMRALALGGRQPEAAEDLLREMLAGGLRPRLRSYSPIIVGYAEQGKLENAFALYDKMLAQDIEPTETELVALLRGCSGEGGGNVEVDNFYRTLADLQDLVLEPGEGAWEAVAGWFEKRRERGDWAVGHDQAAKSGGRGKDRKAALPQTPSPEMSVRRGVVVDEAGVCSGCGTVLESIQLSSEAADELMTKVEELVLADRAREAEWARFKAWLRGPGGGGRAPEFDTVIDGANVGYFQMNYAQAPPHVNYEQISWVVEHFVGMGKKPLLVLHARHVDSRRVPPGYAALVQKWRERQLLLVVPYRNNDDWFWLFATVFKGGRTLLVTNDEMRDHHFQMLSQRTFLRWKERHQVHFSFGGYEKGGGRSVQIQVPAVYSKCIQGPGNGKAAGGREDENWHLPRAGDDKWLCVQVRRGGATHAQNDGGMTEKS 572
            MALKRVYEAAPLNEDVGSKPSASVPPSQSILSESSSSPNAPPQDHNDGSLRQTKRMKRLLASDPAAAERMDYRRRLGLARRDDDIPTALQLFADVQARDIDIGSEGFNALIALLTTFERLEDADQVLTHMRRKHFSLTEATYVCIMRALALGGRQPEAAEDLLREMLAGGLRPRLRSYSPIIVGYAEQGKLENAFALYDKMLAQDIEPTETELVALLRGCSGEGGGNVEVDNFYRTLADLQDLVLEPGEGAWEAVAGWFEKRRERGDWAVGHDQAAKSGGRGKDRKAALPQTPSPEMSVRRGVVVDEAGVCSGCGTVLESIQLSSEAADELMTKVEELVLADRAREAEWARFKAWLRGPGGGGRAPEFDTVIDGANVGYFQMNYAQAPPHVNYEQISWVVEHFVGMGKKPLLVLHARHVDSRRVPPGYAALVQKWRERQLLLVVPYRNNDDWFWLFATVFKGGRTLLVTNDEMRDHHFQMLSQRTFLRWKERHQVHFSFGGYEKGGGRSVQIQVPAVYSKCIQGPGNGKAAGGREDENWHLPRAGDDKWLCVQVRRGGATHAQNDGGMTEKS
Sbjct:    1 MALKRVYEAAPLNEDVGSKPSASVPPSQSILSESSSSPNAPPQDHNDGSLRQTKRMKRLLASDPAAAERMDYRRRLGLARRDDDIPTALQLFADVQARDIDIGSEGFNALIALLTTFERLEDADQVLTHMRRKHFSLTEATYVCIMRALALGGRQPEAAEDLLREMLAGGLRPRLRSYSPIIVGYAEQGKLENAFALYDKMLAQDIEPTETELVALLRGCSGEGGGNVEVDNFYRTLADLQDLVLEPGEGAWEAVAGWFEKRRERGDWAVGHDQAAKSGGRGKDRKAALPQTPSPEMSVRRGVVVDEAGVCSGCGTVLESIQLSSEAADELMTKVEELVLADRAREAEWARFKAWLRGPGGGGRAPEFDTVIDGANVGYFQMNYAQAPPHVNYEQISWVVEHFVGMGKKPLLVLHARHVDSRRVPPGYAALVQKWRERQLLLVVPYRNNDDWFWLFATVFKGGRTLLVTNDEMRDHHFQMLSQRTFLRWKERHQVHFSFGGYEKGGGRSVQIQVPAVYSKCIQGPGNGKAAGGREDENWHLPRAGDDKWLCVQVRRGGATHAQNDGGMTEKS 572          
BLAST of EWM27950.1 vs. NCBI_GenBank
Match: gi|1173949943|gb|OQR97935.1| (hypothetical protein ACHHYP_09428 [Achlya hypogyna])

HSP 1 Score: 268.855 bits (686), Expect = 3.965e-80
Identity = 177/532 (33.27%), Postives = 256/532 (48.12%), Query Frame = 0
Query:   35 SSSPNAPPQDHNDGSLRQTKRMKRLLASDPAAAERMDYRRRLGLARRDDDIPTALQLFADVQARDIDIGSEGFNALIALL-----TTFERLEDADQVLTHMRR------KHFSLTEATYVCIMRALALGGRQPEAAEDLLREMLAGGLRPRLRSYSPIIVGYAEQGKLENAFALYDKMLAQDIEPTETELVALLRGCSGEGGGNVEVDNFYRTLADLQDLVLEPGEGAWEAVAGWFEKRRERGDWAVGHDQAAKSGGRGKDRKAALPQTPSPEMSVRRGVVVDEAGVCSGCGTVLESIQLSSEAADELMTKVEELVLADRAREAEWARFKAWLRGPGGGGRAPEFDTVIDGANVGYFQMNYAQAPPHVNYEQISWVVEHFVGMGKKPLLVLHARHVDSRRVPPGYAALVQKWRERQLLLVVPYRNNDDWFWLFATVFKGGRTLLVTNDEMRDHHFQMLSQRTFLRWKERHQVHFSFGGYEKGGGRSVQIQVPAVYSKCIQGPGNGKAAGGREDENWHLPRAGDDKWLCVQVR 555
            + S    P++ +  + +  KRM+R+    P   E M YR+R+    +  D   AL +F ++Q + +   +  +  ++ L       +   LEDA  VL +M++      K   + E  Y  + R L       + AE +L E+    + P+LR++SP+++ YA   +L +A+ +Y+K+++  +E TETE  ALL   +       + D  Y+ L    D++LEP E  WE +  WF                                  S   +V  G V DE+GVCS  G+ LES++LS      LMTKVE LV     R  +WA FK WL   G       FD ++D AN+GYF  NY       +Y QI  V+  +   GKK L+VLH R    R+VP     LVQ WR+  ++      NNDDW+WL+A V  GGRTL+V+NDEMRDHHFQM+    F RWKERH VH     Y+K  GR +    P VYSK  Q             ++WH P    + WL    +
Sbjct:    2 AESTEKRPREESKMAKQAAKRMRRM---SPHEVELMGYRKRIEACMQSGDAKEALAVFRELQEKGLSGQAYIYQMVLNLCGQAPADSGISLEDAFGVLEYMKKTLVPNGKKHPVDETCYSALAR-LCAQQHATDRAEGVLAELEEAQVLPKLRTFSPLLIEYAASDRLADAWRIYEKIVSHGLEATETEYAALLHAAARVK----DADMVYKILDIFMDVILEPQESTWEVLREWF---------------------------------TSDGWTVETGTV-DESGVCSVTGSTLESVELSEAKQAALMTKVEGLVCTSDERTEQWAAFKEWLDTNGP------FDVILDAANIGYFSQNYEGGG--FSYRQIQRVLSAYQARGKKVLIVLHKRRTSDRQVPEDLRPLVQAWRDDGVMYNCLPGNNDDWYWLYAAVKLGGRTLVVSNDEMRDHHFQMIHNVDFHRWKERHLVH-----YDKDAGRFI-FDEPRVYSKRSQHLA----------KSWHFPTPDKETWLVAHSK 467          
BLAST of EWM27950.1 vs. NCBI_GenBank
Match: gi|669139272|ref|XP_008605204.1| (hypothetical protein SDRG_01457 [Saprolegnia diclina VS20] >gi|530743248|gb|EQC41490.1| hypothetical protein SDRG_01457 [Saprolegnia diclina VS20])

HSP 1 Score: 266.929 bits (681), Expect = 1.621e-79
Identity = 172/517 (33.27%), Postives = 250/517 (48.36%), Query Frame = 0
Query:   42 PQDHNDGSLRQTKRMKRLLASDPAAAERMDYRRRLGLARRDDDIPTALQLFADVQARDIDIGSEGFNALIALLTTFER--LEDADQVLTHMRR------KHFSLTEATYVCIMRALALGGRQPEAAEDLLREMLAGGLRPRLRSYSPIIVGYAEQGKLENAFALYDKMLAQDIEPTETELVALLRGCSGEGGGNVEVDNFYRTLADLQDLVLEPGEGAWEAVAGWFEKRRERGDWAVGHDQAAKSGGRGKDRKAALPQTPSPEMSVRRGVVVDEAGVCSGCGTVLESIQLSSEAADELMTKVEELVLADRAREAEWARFKAWLRGPGGGGRAPEFDTVIDGANVGYFQMNYAQAPPHVNYEQISWVVEHFVGMGKKPLLVLHARHVDSRRVPPGYAALVQKWRERQLLLVVPYRNNDDWFWLFATVFKGGRTLLVTNDEMRDHHFQMLSQRTFLRWKERHQVHFSFGGYEKGGGRSVQIQVPAVYSKCIQGPGNGKAAGGREDENWHLPRAGDDKWL 550
            P+D    + +  KRM+R+    P   E M YR+R+    +  ++  AL +F ++Q +D+ + +  +  L+ L    E   L+DA  VL HM+       K   + E  Y  ++R L       + AE LL E+ A  +  +LR++SP+++ YA   +L +A+ +Y+ + ++ ++ TE E  ALLR    E    +    FY+ LA   D +LEP       +  +F           G+  A  +                          VD  GVCS  G  L+SI+LS E    LM KVE LV  +  R  +WA FK WL   G       FD ++D AN+GYF  N+        Y QI  V++ +  +GKK L+VLH R    R VP    A+VQ W++  ++      NNDDW+WL+A V  GGRTL+V+NDEMRDHHF M++   F RWKERH VH     YEK  G+      P+VYSK  Q   +          +WH P    D WL
Sbjct:    8 PRDDEAAAKKMNKRMRRM---SPEELELMGYRKRMEACMQSANVVEALAIFREMQEKDVKMQAYIYQMLLTLCGQAEANILDDAFAVLNHMKERLGATSKKHPVDEPCYSALVR-LCAKHHATDRAEALLAEVEAAHVLTKLRTFSPLLLEYASTKRLTDAWRIYETIKSKALDVTEIEFTALLRAAHVESNAAM----FYKILAIFMDEILEPSNETQVVLESFFTSN--------GYTCATGT--------------------------VDPNGVCSITGAQLQSIELSDEKQAALMAKVEGLVCTNDERTEQWAAFKEWLDANGP------FDVLLDAANIGYFSQNFEGGG--FKYTQIQRVLQAYQALGKKVLIVLHKRRTKDREVPEALRAMVQSWKDDGVMFNCRPGNNDDWYWLYAAVKLGGRTLVVSNDEMRDHHFSMIANVDFQRWKERHLVH-----YEKVNGK-FSFDEPSVYSKRSQQLTH----------SWHFPSPNKDTWL 458          
BLAST of EWM27950.1 vs. NCBI_GenBank
Match: gi|698784329|ref|XP_009825208.1| (hypothetical protein H257_03015 [Aphanomyces astaci] >gi|574119711|gb|ETV85190.1| hypothetical protein H257_03015 [Aphanomyces astaci])

HSP 1 Score: 265.774 bits (678), Expect = 8.332e-79
Identity = 164/525 (31.24%), Postives = 256/525 (48.76%), Query Frame = 0
Query:   47 DGSLRQTKRMKRLLASDPAAAERMDYRRRLGLARRDDDIPTALQLFADVQARDIDIGSEGFNALIALLTTFERLED----ADQVLTHM--------RRKHFSLTEATYVCIMRALALGGRQPEAAEDLLREMLAGGLRPRLRSYSPIIVGYAEQGKLENAFALYDKMLAQDIEPTETELVALLRGCSGEGGGNVEVDNFYRTLADLQDLVLEPGEGAWEAVAGWFEKRR-ERGDWAVGHDQAAKSGGRGKDRKAALPQTPSPEMSVRRGVVVDEAGVCSGCGTVLESIQLSSEAADELMTKVEELVLADRAREAEWARFKAWLRGPGGGGRAPEFDTVIDGANVGYFQMNYAQAPPHVNYEQISWVVEHFVGMGKKPLLVLHARHVDSRRVPPGYAALVQKWRERQLLLVVPYRNNDDWFWLFATVFKGGRTLLVTNDEMRDHHFQMLSQRTFLRWKERHQVHFSFGGYEKGGGRSVQIQVPAVYSKCIQGPGNGKAAGGREDENWHLPRAGDDKWLCVQVRRGG 558
            +G  +  K+MK+L    P  A +++YR++L       + P AL +F +++  DI + +  +  ++ +       ED    A  V  HM        R K   + E++Y  +++ L       + A  L+ E+ A  + P+LR+++P++  +A    L+ A+ +++K+L  +I+ TE E +ALL   S     ++    FY+ L    D VL P    W+ +  +F K    +GD        A     G+                     V++ G+CS  G+ L+S++LS E  D L+ KVE LV     R  +W  FK WL   G       FD +ID ANVGYF  N+       +Y QI  V++ +   G+KPL+VLH R     +VP  + A+VQ+W+   ++    Y NNDDW+WL+A V   GRTL+V+NDEMRDHHFQM+  + F RWKERH VH+   G++      + +  P+VYS   Q   +G         +WH P      WL    RR  
Sbjct:   15 NGDAQTKKKMKKLT---PEQATQLEYRKKLEACAAASNAPQALAVFREMKDNDIPLQTYLYQMILNICGQSTTQEDIVGAAFDVYEHMKTHASSTPRSKKHPVDESSYSALIK-LCSKHHITDRALALIAELEAHKVSPKLRTFAPLLAEFASTLDLKQAWWVFEKLLEHEIDATEGEYIALLTASSALNDASM----FYKVLGLFCDQVLVPSPSTWDVLKAFFGKSELHKGD--------AWQCNIGE---------------------VNDQGICSVTGSTLQSVELSREKEDALLAKVENLVCTSDERIEQWTAFKTWLDEHGP------FDVIIDAANVGYFNQNFEGGG--FSYPQIQTVLKAYQDKGQKPLIVLHKRRTKDHQVPEPHRAMVQQWKHDNVMFNCQYGNNDDWYWLYAAVKLSGRTLVVSNDEMRDHHFQMIHNQDFHRWKERHLVHYEVRGHK------LDLHEPSVYSMRSQHLESG---------SWHFPSTASSDWLVFHRRRSS 479          
BLAST of EWM27950.1 vs. NCBI_GenBank
Match: gi|673027442|ref|XP_008867682.1| (hypothetical protein H310_04913 [Aphanomyces invadans] >gi|574476455|gb|ETW03453.1| hypothetical protein H310_04913 [Aphanomyces invadans])

HSP 1 Score: 264.618 bits (675), Expect = 1.964e-78
Identity = 164/512 (32.03%), Postives = 252/512 (49.22%), Query Frame = 0
Query:   64 PAAAERMDYRRRLGLARRDDDIPTALQLFADVQARDIDIGSEGFNALIALL----TTFERLEDADQVLTHMR----------RKHFSLTEATYVCIMRALALGGRQPEAAEDLLREMLAGGLRPRLRSYSPIIVGYAEQGKLENAFALYDKMLAQDIEPTETELVALLRGCSGEGGGNVEVDNFYRTLADLQDLVLEPGEGAWEAVAGWFEKRRERGDWAVGHDQAAKSGGRGKDRKAALPQTPSPEMSVRRGVVVDEAGVCSGCGTVLESIQLSSEAADELMTKVEELVLADRAREAEWARFKAWL--RGPGGGGRAPEFDTVIDGANVGYFQMNYAQAPPHVNYEQISWVVEHFVGMGKKPLLVLHARHVDSRRVPPGYAALVQKWRERQLLLVVPYRNNDDWFWLFATVFKGGRTLLVTNDEMRDHHFQMLSQRTFLRWKERHQVHFSFGGYEKGGGRSVQIQVPAVYSKCIQGPGNGKAAGGREDENWHLPRAGDDKWLCVQVRRGGA 559
            P    +++YR+RL       + P AL LF +++   + + +  +  ++ +          + DA +V  HM+          +KH  + E++Y  +++ L       E A  L+ E+    + P+LR+++P++V +     L+ A+ +Y+K++   I+ TE E  ALL    G      ++D FY+ L    D +L P    W+ +  +F      G   +  D+   + G                        V++AG+CS  G+ L+S++LS+E    L+TKVE LV     R A+WA FKAWL   GP        FD +ID ANVGYF  N+       NY QI  VV+ +   G  PL+VLH R     +VP  + A+VQ+W++ + +    Y NNDDW+WL+A V  GGRTL+V+NDEMRDHHFQM+  + F RWKERH VH+   G+      +V +  P+VYSK  Q   +          +WH P      WL    RR  A
Sbjct:   30 PEQLTQLEYRKRLEACAASSNAPEALALFHEMKQMGVPLHTYLYQVILNICGQSTAANNLVADAFEVYEHMKIHAAAAMPKSKKH-PVDESSYSALIK-LCSKQHMTERALALITELEDNKVAPKLRTFAPLLVEFTSILDLKQAWWVYEKLVHHGIDATEAEYAALL----GASSALNDLDMFYKVLGIFCDEILVPSPSTWQILKEFF------GKPGIHKDKWLCNVGE-----------------------VNKAGICSVTGSTLQSVELSAEKQQALLTKVENLVCTSDERVAQWAAFKAWLDEHGP--------FDVIIDAANVGYFNQNFEGGG--FNYGQIQTVVQAYQSKGLTPLIVLHKRRTKDNQVPAQHRAMVQQWKDEKTMFNCEYGNNDDWYWLYAAVKLGGRTLVVSNDEMRDHHFQMIHNQDFHRWKERHLVHYEVRGH------NVVLHEPSVYSKRSQHLAS----------SWHFPTTSSSDWLVFHRRRQPA 480          
BLAST of EWM27950.1 vs. NCBI_GenBank
Match: gi|675204125|ref|XP_008910947.1| (hypothetical protein, variant 1 [Phytophthora parasitica INRA-310] >gi|568088866|gb|ETN03720.1| hypothetical protein, variant 1 [Phytophthora parasitica INRA-310])

HSP 1 Score: 265.003 bits (676), Expect = 2.695e-78
Identity = 165/519 (31.79%), Postives = 254/519 (48.94%), Query Frame = 0
Query:   67 AERMDYRRRLGLAR--RDDDIPTALQLFADVQARDIDIGSEGFNALIALLT-----------TFERLEDADQV-LTHMRRKHFSLTEATYVCIMRALALGGRQPEAAEDLLREMLAGGLRPRLRSYSPIIVGYAEQGKLENAFALYDKMLAQDIEPTETELVALLRGCSGEGGGNVEVDNFYRTLADLQDLVLEPGEGAWEAVAGWFEKRRERGDWAVGHDQAAKSGGRGKDRKAALPQTPSPEMSVRRGVVVDEAGVCSGCGTVLESIQLSSEAADELMTKVEELVLADRAREAEWARFKAWLRGPGGGGRAPEFDTVIDGANVGYFQMNYAQAPPHVNYEQISWVVEHFVGMGKKPLLVLHARHVDSRRVPPGYAALVQKWRERQLLLVVPYRNNDDWFWLFATVFKGGRTLLVTNDEMRDHHFQMLSQRTFLRWKERHQVHFSFGGYEKGGGRSVQIQVPAVYSKCIQGPGNGKAAGGREDENWHLPRA-----------------GDDKWLCVQV 554
            AE+++Y+ R+ +    +++D   AL+++  +++  +++    +N +I + +            ++  +D  Q   +  +RK     E  Y  +++ L    +  +A E ++ EM A  + P+LR++ P++  +++ G L+    +++K+L+ ++E TE + VALLR C   G      + FY  L    D + +P    W+ +  WF            + +AA+  GR              +  +  G V  E GVCS  G  L+S++LS+E   EL+ K+E+LV  D  R A+W  FK WL   G       FD VID ANVGY   N+       NY QI  +V+H+    KK L+VLH R      VP  + A + +WR    +    Y NNDDW+WL+  V  GGRTL+V+NDEMRDHHFQM+  R F RWKERHQVH     Y+  G R V +  P  YS   Q  G+          NWH P A                  D KWLCV++
Sbjct:   40 AEKLEYQYRIQVQNCAQENDATRALEVYEQMKSEGMNVAPYIYNVVINVCSKANDPAAFKDGAYKVYQDMKQANASSKQRKKSDSGEPIYSAMIK-LCSKAQDFDACETIIAEMEAAKVEPKLRTFGPLLQAHSDAGNLDKCIWVHEKLLSYELELTEDDYVALLRACVKTGNS----ERFYAFLESFIDEIWQPNLSTWDVLNDWF------------NSEAAQVDGR--------------KWRITEGTVSKE-GVCSVTGDQLQSVELSAEVTTELLAKIEKLVRTDEKRMAQWDEFKQWLEEFGP------FDVVIDAANVGYCNQNFDGGG--FNYAQIELMVQHYEVQDKKVLIVLHERRTSDEEVPAEHRAQIAEWRASHKMFNCQYGNNDDWYWLYTAVKLGGRTLMVSNDEMRDHHFQMIHNRAFRRWKERHQVH-----YQVHGSR-VTVDEPLPYSARPQRVGD----------NWHFPAADTAADDSGTTETASAQVADRKWLCVEL 502          
BLAST of EWM27950.1 vs. NCBI_GenBank
Match: gi|570319981|gb|ETO67929.1| (hypothetical protein, variant 1 [Phytophthora parasitica P1976])

HSP 1 Score: 264.618 bits (675), Expect = 2.950e-78
Identity = 164/519 (31.60%), Postives = 255/519 (49.13%), Query Frame = 0
Query:   67 AERMDYRRRLGLAR--RDDDIPTALQLFADVQARDIDIGSEGFNALIALLT-----------TFERLEDADQV-LTHMRRKHFSLTEATYVCIMRALALGGRQPEAAEDLLREMLAGGLRPRLRSYSPIIVGYAEQGKLENAFALYDKMLAQDIEPTETELVALLRGCSGEGGGNVEVDNFYRTLADLQDLVLEPGEGAWEAVAGWFEKRRERGDWAVGHDQAAKSGGRGKDRKAALPQTPSPEMSVRRGVVVDEAGVCSGCGTVLESIQLSSEAADELMTKVEELVLADRAREAEWARFKAWLRGPGGGGRAPEFDTVIDGANVGYFQMNYAQAPPHVNYEQISWVVEHFVGMGKKPLLVLHARHVDSRRVPPGYAALVQKWRERQLLLVVPYRNNDDWFWLFATVFKGGRTLLVTNDEMRDHHFQMLSQRTFLRWKERHQVHFSFGGYEKGGGRSVQIQVPAVYSKCIQGPGNGKAAGGREDENWHLPRA-----------------GDDKWLCVQV 554
            AE+++Y+ R+ + +  ++++   AL+++  +++  +++    +N +I + +            ++  +D  Q   +  +RK     E  Y  +++ L    +  +A E ++ EM A  + P+LR++ P++  +++ G L+    +++K+L+ ++E TE + VALLR C   G      + FY  L    D + +P    W+ +  WF            + +AA+  GR              +  +  G V  E GVCS  G  L+S++LS+E   EL+ K+E+LV  D  R A+W  FK WL   G       FD VID ANVGY   N+       NY QI  +V+H+    KK L+VLH R      VP  + A + +WR    +    Y NNDDW+WL+  V  GGRTL+V+NDEMRDHHFQM+  R F RWKERHQVH     Y+  G R V +  P  YS          A   R  +NWH P A                  D KWLCV++
Sbjct:   31 AEKLEYQYRIQVQKCAQENNATRALEVYEQMKSEGVNVAPYIYNVVINVCSKANDPAAFKDGAYKVYQDMKQANASSKQRKKSDSGEPIYSAMIK-LCSKAQDFDACETIIAEMEAAKVEPKLRTFGPLLQAHSDAGNLDKCIWVHEKLLSYELELTEDDYVALLRACVKTGNS----ERFYAFLESFIDEIWQPNLSTWDVLNDWF------------NSEAAQVDGR--------------KWRITEGTVSKE-GVCSVTGDQLQSVELSAEVTTELLAKIEKLVRTDEKRMAQWDEFKQWLEEFGP------FDVVIDAANVGYCNQNFDGGG--FNYAQIELMVQHYEVQDKKVLIVLHERRTSDEEVPAEHRAQIAEWRASHKMFNCQYGNNDDWYWLYTAVKLGGRTLMVSNDEMRDHHFQMIHNRAFRRWKERHQVH-----YQVHGSR-VTVDEPLPYS----------ARPQRVGDNWHFPAADTAADDSGTTETASAQVADRKWLCVEL 493          
BLAST of EWM27950.1 vs. NCBI_GenBank
Match: gi|568011890|gb|ETL86068.1| (hypothetical protein, variant 1 [Phytophthora parasitica] >gi|570319980|gb|ETO67928.1| hypothetical protein F444_15196 [Phytophthora parasitica P1976])

HSP 1 Score: 265.003 bits (676), Expect = 3.092e-78
Identity = 164/519 (31.60%), Postives = 255/519 (49.13%), Query Frame = 0
Query:   67 AERMDYRRRLGLAR--RDDDIPTALQLFADVQARDIDIGSEGFNALIALLT-----------TFERLEDADQV-LTHMRRKHFSLTEATYVCIMRALALGGRQPEAAEDLLREMLAGGLRPRLRSYSPIIVGYAEQGKLENAFALYDKMLAQDIEPTETELVALLRGCSGEGGGNVEVDNFYRTLADLQDLVLEPGEGAWEAVAGWFEKRRERGDWAVGHDQAAKSGGRGKDRKAALPQTPSPEMSVRRGVVVDEAGVCSGCGTVLESIQLSSEAADELMTKVEELVLADRAREAEWARFKAWLRGPGGGGRAPEFDTVIDGANVGYFQMNYAQAPPHVNYEQISWVVEHFVGMGKKPLLVLHARHVDSRRVPPGYAALVQKWRERQLLLVVPYRNNDDWFWLFATVFKGGRTLLVTNDEMRDHHFQMLSQRTFLRWKERHQVHFSFGGYEKGGGRSVQIQVPAVYSKCIQGPGNGKAAGGREDENWHLPRA-----------------GDDKWLCVQV 554
            AE+++Y+ R+ + +  ++++   AL+++  +++  +++    +N +I + +            ++  +D  Q   +  +RK     E  Y  +++ L    +  +A E ++ EM A  + P+LR++ P++  +++ G L+    +++K+L+ ++E TE + VALLR C   G      + FY  L    D + +P    W+ +  WF            + +AA+  GR              +  +  G V  E GVCS  G  L+S++LS+E   EL+ K+E+LV  D  R A+W  FK WL   G       FD VID ANVGY   N+       NY QI  +V+H+    KK L+VLH R      VP  + A + +WR    +    Y NNDDW+WL+  V  GGRTL+V+NDEMRDHHFQM+  R F RWKERHQVH     Y+  G R V +  P  YS   Q  G+          NWH P A                  D KWLCV++
Sbjct:   40 AEKLEYQYRIQVQKCAQENNATRALEVYEQMKSEGVNVAPYIYNVVINVCSKANDPAAFKDGAYKVYQDMKQANASSKQRKKSDSGEPIYSAMIK-LCSKAQDFDACETIIAEMEAAKVEPKLRTFGPLLQAHSDAGNLDKCIWVHEKLLSYELELTEDDYVALLRACVKTGNS----ERFYAFLESFIDEIWQPNLSTWDVLNDWF------------NSEAAQVDGR--------------KWRITEGTVSKE-GVCSVTGDQLQSVELSAEVTTELLAKIEKLVRTDEKRMAQWDEFKQWLEEFGP------FDVVIDAANVGYCNQNFDGGG--FNYAQIELMVQHYEVQDKKVLIVLHERRTSDEEVPAEHRAQIAEWRASHKMFNCQYGNNDDWYWLYTAVKLGGRTLMVSNDEMRDHHFQMIHNRAFRRWKERHQVH-----YQVHGSR-VTVDEPLPYSARPQRVGD----------NWHFPAADTAADDSGTTETASAQVADRKWLCVEL 502          
BLAST of EWM27950.1 vs. NCBI_GenBank
Match: gi|675204123|ref|XP_008910946.1| (hypothetical protein PPTG_15930 [Phytophthora parasitica INRA-310] >gi|568088865|gb|ETN03719.1| hypothetical protein PPTG_15930 [Phytophthora parasitica INRA-310])

HSP 1 Score: 265.003 bits (676), Expect = 3.186e-78
Identity = 165/519 (31.79%), Postives = 254/519 (48.94%), Query Frame = 0
Query:   67 AERMDYRRRLGL--ARRDDDIPTALQLFADVQARDIDIGSEGFNALIALLT-----------TFERLEDADQV-LTHMRRKHFSLTEATYVCIMRALALGGRQPEAAEDLLREMLAGGLRPRLRSYSPIIVGYAEQGKLENAFALYDKMLAQDIEPTETELVALLRGCSGEGGGNVEVDNFYRTLADLQDLVLEPGEGAWEAVAGWFEKRRERGDWAVGHDQAAKSGGRGKDRKAALPQTPSPEMSVRRGVVVDEAGVCSGCGTVLESIQLSSEAADELMTKVEELVLADRAREAEWARFKAWLRGPGGGGRAPEFDTVIDGANVGYFQMNYAQAPPHVNYEQISWVVEHFVGMGKKPLLVLHARHVDSRRVPPGYAALVQKWRERQLLLVVPYRNNDDWFWLFATVFKGGRTLLVTNDEMRDHHFQMLSQRTFLRWKERHQVHFSFGGYEKGGGRSVQIQVPAVYSKCIQGPGNGKAAGGREDENWHLPRA-----------------GDDKWLCVQV 554
            AE+++Y+ R+ +    +++D   AL+++  +++  +++    +N +I + +            ++  +D  Q   +  +RK     E  Y  +++ L    +  +A E ++ EM A  + P+LR++ P++  +++ G L+    +++K+L+ ++E TE + VALLR C   G      + FY  L    D + +P    W+ +  WF            + +AA+  GR              +  +  G V  E GVCS  G  L+S++LS+E   EL+ K+E+LV  D  R A+W  FK WL   G       FD VID ANVGY   N+       NY QI  +V+H+    KK L+VLH R      VP  + A + +WR    +    Y NNDDW+WL+  V  GGRTL+V+NDEMRDHHFQM+  R F RWKERHQVH     Y+  G R V +  P  YS          A   R  +NWH P A                  D KWLCV++
Sbjct:   46 AEKLEYQYRIQVQNCAQENDATRALEVYEQMKSEGMNVAPYIYNVVINVCSKANDPAAFKDGAYKVYQDMKQANASSKQRKKSDSGEPIYSAMIK-LCSKAQDFDACETIIAEMEAAKVEPKLRTFGPLLQAHSDAGNLDKCIWVHEKLLSYELELTEDDYVALLRACVKTGNS----ERFYAFLESFIDEIWQPNLSTWDVLNDWF------------NSEAAQVDGR--------------KWRITEGTVSKE-GVCSVTGDQLQSVELSAEVTTELLAKIEKLVRTDEKRMAQWDEFKQWLEEFGP------FDVVIDAANVGYCNQNFDGGG--FNYAQIELMVQHYEVQDKKVLIVLHERRTSDEEVPAEHRAQIAEWRASHKMFNCQYGNNDDWYWLYTAVKLGGRTLMVSNDEMRDHHFQMIHNRAFRRWKERHQVH-----YQVHGSR-VTVDEPLPYS----------ARPQRVGDNWHFPAADTAADDSGTTETASAQVADRKWLCVEL 508          
BLAST of EWM27950.1 vs. NCBI_GenBank
Match: gi|567953742|gb|ETK79388.1| (hypothetical protein L915_14751 [Phytophthora parasitica] >gi|567982379|gb|ETL32800.1| hypothetical protein L916_14666 [Phytophthora parasitica] >gi|570943817|gb|ETP09074.1| hypothetical protein F441_15025 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 264.618 bits (675), Expect = 3.861e-78
Identity = 164/519 (31.60%), Postives = 255/519 (49.13%), Query Frame = 0
Query:   67 AERMDYRRRLGLAR--RDDDIPTALQLFADVQARDIDIGSEGFNALIALLT-----------TFERLEDADQV-LTHMRRKHFSLTEATYVCIMRALALGGRQPEAAEDLLREMLAGGLRPRLRSYSPIIVGYAEQGKLENAFALYDKMLAQDIEPTETELVALLRGCSGEGGGNVEVDNFYRTLADLQDLVLEPGEGAWEAVAGWFEKRRERGDWAVGHDQAAKSGGRGKDRKAALPQTPSPEMSVRRGVVVDEAGVCSGCGTVLESIQLSSEAADELMTKVEELVLADRAREAEWARFKAWLRGPGGGGRAPEFDTVIDGANVGYFQMNYAQAPPHVNYEQISWVVEHFVGMGKKPLLVLHARHVDSRRVPPGYAALVQKWRERQLLLVVPYRNNDDWFWLFATVFKGGRTLLVTNDEMRDHHFQMLSQRTFLRWKERHQVHFSFGGYEKGGGRSVQIQVPAVYSKCIQGPGNGKAAGGREDENWHLPRA-----------------GDDKWLCVQV 554
            AE+++Y+ R+ + +  ++++   AL+++  +++  +++    +N +I + +            ++  +D  Q   +  +RK     E  Y  +++ L    +  +A E ++ EM A  + P+LR++ P++  +++ G L+    +++K+L+ ++E TE + VALLR C   G      + FY  L    D + +P    W+ +  WF            + +AA+  GR              +  +  G V  E GVCS  G  L+S++LS+E   EL+ K+E+LV  D  R A+W  FK WL   G       FD VID ANVGY   N+       NY QI  +V+H+    KK L+VLH R      VP  + A + +WR    +    Y NNDDW+WL+  V  GGRTL+V+NDEMRDHHFQM+  R F RWKERHQVH     Y+  G R V +  P  YS   Q  G+          NWH P A                  D KWLCV++
Sbjct:   40 AEKLEYQYRIQVQKCAQENNATRALEVYEQMKSEGMNVAPYIYNVVINVCSKANDPAAFKDGAYKVYQDMKQANASSKQRKKSDSGEPIYSAMIK-LCSKAQDFDACETIIAEMEAAKVEPKLRTFGPLLQAHSDAGNLDKCIWVHEKLLSYELELTEDDYVALLRACVKTGNS----ERFYAFLESFIDEIWQPNLSTWDVLKDWF------------NSEAAQVDGR--------------KWRITEGTVSKE-GVCSVTGDQLQSVELSAEVTTELLAKIEKLVRTDEKRMAQWDEFKQWLEEFGP------FDVVIDAANVGYCNQNFDGGG--FNYAQIELMVQHYEVQDKKVLIVLHERRTSDEEVPAEHRAQIAEWRASHKMFNCQYGNNDDWYWLYTAVKLGGRTLMVSNDEMRDHHFQMIHNRAFRRWKERHQVH-----YQVHGSR-VTVDEPLPYSARPQRVGD----------NWHFPAADTAADDSGTTETASAQVADRKWLCVEL 502          
The following BLAST results are available for this feature:
BLAST of EWM27950.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585110291|gb|EWM27950.1|0.000e+0100.00Ribonuclease Zc3h12a-like protein [Nannochloropsis... [more]
gi|1173949943|gb|OQR97935.1|3.965e-8033.27hypothetical protein ACHHYP_09428 [Achlya hypogyna... [more]
gi|669139272|ref|XP_008605204.1|1.621e-7933.27hypothetical protein SDRG_01457 [Saprolegnia dicli... [more]
gi|698784329|ref|XP_009825208.1|8.332e-7931.24hypothetical protein H257_03015 [Aphanomyces astac... [more]
gi|673027442|ref|XP_008867682.1|1.964e-7832.03hypothetical protein H310_04913 [Aphanomyces invad... [more]
gi|675204125|ref|XP_008910947.1|2.695e-7831.79hypothetical protein, variant 1 [Phytophthora para... [more]
gi|570319981|gb|ETO67929.1|2.950e-7831.60hypothetical protein, variant 1 [Phytophthora para... [more]
gi|568011890|gb|ETL86068.1|3.092e-7831.60hypothetical protein, variant 1 [Phytophthora para... [more]
gi|675204123|ref|XP_008910946.1|3.186e-7831.79hypothetical protein PPTG_15930 [Phytophthora para... [more]
gi|567953742|gb|ETK79388.1|3.861e-7831.60hypothetical protein L915_14751 [Phytophthora para... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2696rna2696Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications