EWM27934.1, cds2681 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27934.1 vs. NCBI_GenBank
Match: gi|585110275|gb|EWM27934.1| (sf [Nannochloropsis gaditana]) HSP 1 Score: 662.529 bits (1708), Expect = 0.000e+0 Identity = 330/330 (100.00%), Postives = 330/330 (100.00%), Query Frame = 0
Query: 1 METTYTHQPPPPPPPPPSGPSSGFVHSQYRPPSSLRHMAPPPPSGPGGMATTRSETKQKLASIIDNFSHLDLEVKMGTQQRREKDESRLQELRASVLKIDKALSAEIKRGLERNKLLEKWAEDQLAATANQFAARLEERTQEAQDRLGVLQSRVDSLEEYFTREKEQALSLVEERGSALSQALVELQEGMDAERRDRLEREGRMLRLLGDQEEGVALRFEQERTSREAKIVEVRQSLDEFVRARKKVDDRFQAFVTEELGALKGELAREAAARAREDDEIIEALGRYTNKLQHSLKIVNAAALCGGSEGGGALMASYASGSGEGGDGYVL 330
METTYTHQPPPPPPPPPSGPSSGFVHSQYRPPSSLRHMAPPPPSGPGGMATTRSETKQKLASIIDNFSHLDLEVKMGTQQRREKDESRLQELRASVLKIDKALSAEIKRGLERNKLLEKWAEDQLAATANQFAARLEERTQEAQDRLGVLQSRVDSLEEYFTREKEQALSLVEERGSALSQALVELQEGMDAERRDRLEREGRMLRLLGDQEEGVALRFEQERTSREAKIVEVRQSLDEFVRARKKVDDRFQAFVTEELGALKGELAREAAARAREDDEIIEALGRYTNKLQHSLKIVNAAALCGGSEGGGALMASYASGSGEGGDGYVL
Sbjct: 1 METTYTHQPPPPPPPPPSGPSSGFVHSQYRPPSSLRHMAPPPPSGPGGMATTRSETKQKLASIIDNFSHLDLEVKMGTQQRREKDESRLQELRASVLKIDKALSAEIKRGLERNKLLEKWAEDQLAATANQFAARLEERTQEAQDRLGVLQSRVDSLEEYFTREKEQALSLVEERGSALSQALVELQEGMDAERRDRLEREGRMLRLLGDQEEGVALRFEQERTSREAKIVEVRQSLDEFVRARKKVDDRFQAFVTEELGALKGELAREAAARAREDDEIIEALGRYTNKLQHSLKIVNAAALCGGSEGGGALMASYASGSGEGGDGYVL 330
BLAST of EWM27934.1 vs. NCBI_GenBank
Match: gi|298709165|emb|CBJ31109.1| (SF-assemblin [Ectocarpus siliculosus]) HSP 1 Score: 184.496 bits (467), Expect = 4.805e-53 Identity = 102/248 (41.13%), Postives = 158/248 (63.71%), Query Frame = 0
Query: 56 TKQKLASIIDNFSHLDLEVKMGTQQRREKDESRLQELRASVLKIDKALSAEIKRGLERNKLLEKWAEDQLAATANQFAARLEERTQEAQDRLGVLQSRVDSLEEYFTREKEQALSLVEERGSALSQALVELQEGMDAERRDRLEREGRMLRLLGDQEEGVALRFEQERTSREAKIVEVRQSLDEFVRARKKVDDRFQAFVTEELGALKGELAREAAARAREDDEIIEALGRYTNKLQHSLKIVNAAAL 303
TK +L I+++F D ++K GT+ RRE DE R+ +L A + +++K L+ EIKR +E NK ++ W E ++ + Q + + R+ RL + ++D+LE+ F E + +++RG L + L + + +AER RLEREGR+L+ L D E+ VA FE ERTSRE ++R+ LDE VR+R K D++FQ+FV EEL LK ++ E R R+D EI++AL RYT+KLQ SLKI+N++ +
Sbjct: 23 TKARLNGILESFQAFDSDMKTGTRVRRENDEHRIAQLTAELTRLEKTLNQEIKRRVEMNKSVQVWGESEVEKMSEQLQSMVIARSDSIAGRLDDIVGKIDALEDKFDVEMAKIPVDIKQRGEELHKMLTDFENKFEAERMSRLEREGRILKQLADHEQEVATDFETERTSRENTYADLRRILDENVRSRMKGDEKFQSFVREELADLKSAVSLERQTRERDDGEIVDALNRYTSKLQSSLKIINSSEI 270
BLAST of EWM27934.1 vs. NCBI_GenBank
Match: gi|673030466|ref|XP_008869194.1| (hypothetical protein H310_06063 [Aphanomyces invadans] >gi|574475589|gb|ETW02589.1| hypothetical protein H310_06063 [Aphanomyces invadans]) HSP 1 Score: 183.726 bits (465), Expect = 1.429e-52 Identity = 105/258 (40.70%), Postives = 157/258 (60.85%), Query Frame = 0
Query: 43 PSGPGGMATTRSETKQKLASIIDNFSHLDLEVKMGTQQRREKDESRLQELRASVLKIDKALSAEIKRGLERNKLLEKWAEDQLAATANQFAARLEERTQEAQDRLGVLQSRVDSLEEYFTREKEQALSLVEERGSALSQALVELQEGMDAERRDRLEREGRMLRLLGDQEEGVALRFEQERTSREAKIVEVRQSLDEFVRARKKVDDRFQAFVTEELGALKGELAREAAARAREDDEIIEALGRYTNKLQHSLKIVNA 300
P G +ATT +TK KL ++ F+ D +++GT+QRRE+DE RL E+RA + +++KAL+AE KR E NK L+ +D +AA +F A L + + RL L ++ +LE F EK ++E R + L+ L + +AER RLERE +L+ L D E+ VA +F +ER RE K E+++SLD + + R + D +FQ EE+ ++ L +E+ R REDDEII+AL RYT KLQ SLK++N+
Sbjct: 23 PDTIGTLATT--QTKTKLNKMMSAFASFDDNMRIGTRQRRERDEHRLAEMRADMSRLEKALNAETKRRFEMNKSLQALCDDSVAAMTAKFDALLADWMAKVDGRLQALADKIQALEAQFEYEKVHIPQVIEARTNELTAKLSNFMDAFEAERTRRLEREAEILKRLSDHEQLVADQFSKERRDREVKATELKESLDMYTKTRLRGDGKFQHLAQEEIAKIQNLLVQESQTREREDDEIIDALNRYTAKLQDSLKLINS 278
BLAST of EWM27934.1 vs. NCBI_GenBank
Match: gi|669157480|ref|XP_008614302.1| (hypothetical protein SDRG_10108 [Saprolegnia diclina VS20] >gi|530734119|gb|EQC32361.1| hypothetical protein SDRG_10108 [Saprolegnia diclina VS20]) HSP 1 Score: 185.652 bits (470), Expect = 1.584e-52 Identity = 102/254 (40.16%), Postives = 159/254 (62.60%), Query Frame = 0
Query: 47 GGMATTRSETKQKLASIIDNFSHLDLEVKMGTQQRREKDESRLQELRASVLKIDKALSAEIKRGLERNKLLEKWAEDQLAATANQFAARLEERTQEAQDRLGVLQSRVDSLEEYFTREKEQALSLVEERGSALSQALVELQEGMDAERRDRLEREGRMLRLLGDQEEGVALRFEQERTSREAKIVEVRQSLDEFVRARKKVDDRFQAFVTEELGALKGELAREAAARAREDDEIIEALGRYTNKLQHSLKIVNA 300
G +ATT +TK KL +++ F+ D +++GT+QRRE+DE RL E+RA + +++KAL+AEIKR E NK L+ ++ +A ++F + L + + RL L ++ +LE F EK ++EER + L++ L + + ER+ RL+RE +L+ L D E+ VA +F +ER RE K E++ +LD + + R + DD+FQ EE+ ++ L EA R REDDEII+AL RYT KLQ SLK++N+
Sbjct: 89 GSLATT--QTKIKLNKMMNAFASFDDNMRIGTRQRRERDEHRLAEMRAEMTRLEKALNAEIKRRFEMNKSLQALCDESVANMTSRFESLLADSMDKVDARLAGLAEKIQALEAQFEYEKVHIPQMIEERTNELTEKLSAFMDAFETERKRRLDREAEILKRLFDHEQLVADQFSKERRDREVKATELKDALDMYTKTRLRGDDKFQRVAQEEIAKIQNALVHEAQTREREDDEIIDALNRYTAKLQDSLKLINS 340
BLAST of EWM27934.1 vs. NCBI_GenBank
Match: gi|1173936557|gb|OQR87478.1| (SF-assemblin [Achlya hypogyna]) HSP 1 Score: 181.8 bits (460), Expect = 6.466e-51 Identity = 100/255 (39.22%), Postives = 156/255 (61.18%), Query Frame = 0
Query: 47 GGMATTRSETKQKLASIIDNFSHLDLEVKMGTQQRREKDESRLQELRASVLKIDKALSAEIKRGLERNKLLEKWAEDQLAATANQFAARLEERTQEAQDRLGVLQSRVDSLEEYFTREKEQALSLVEERGSALSQALVELQEGMDAERRDRLEREGRMLRLLGDQEEGVALRFEQERTSREAKIVEVRQSLDEFVRARKKVDDRFQAFVTEELGALKGELAREAAARAREDDEIIEALGRYTNKLQHSLKIVNAA 301
G +ATT +TK KL +++ F+ D +++GT+QRRE+DE RL E+RA + +++KAL+AEIKR E NK L+ +D + +F L + + RL L ++ +LE F EK ++E+R + L++ L + + ER+ RL+RE +L+ L D E+ VA +F +ER RE K E++ +LD + + R + DD+FQ EE+ ++ L E+ R REDDEII+AL RYT KLQ SLK++N+
Sbjct: 97 GSLATT--QTKIKLNKMMNAFASFDDNMRIGTRQRRERDEHRLAEMRAEMTRLEKALNAEIKRRFEMNKSLQALCDDSVTLMTTRFEGLLADSMAKVDARLSGLAEKIQALEAQFEYEKVHIPQMIEDRTNELTEKLSAFMDAFETERKRRLDREAEILKRLFDHEQLVADQFSKERRDREVKATELKDALDMYTKTRLRGDDKFQHVAQEEIAKIQNLLVHESQTREREDDEIIDALNRYTAKLQDSLKLINST 349
BLAST of EWM27934.1 vs. NCBI_GenBank
Match: gi|813145457|ref|XP_012199814.1| (hypothetical protein SPRG_05844 [Saprolegnia parasitica CBS 223.65] >gi|641535397|gb|KDO29307.1| hypothetical protein SPRG_05844 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 179.489 bits (454), Expect = 6.938e-51 Identity = 102/272 (37.50%), Postives = 161/272 (59.19%), Query Frame = 0
Query: 30 RPPSSLRHMAPPPPSGPGGMATTRSETKQKLASIIDNFSHLDLEVKMGTQQRREKDESRLQELRASVLKIDKALSAEIKRGLERNKLLEKWAEDQLAATANQFAARLEERTQEAQDRLGVLQSRVDSLEEYFTREKEQALSLVEERGSALSQALVELQEGMDAERRDRLEREGRMLRLLGDQEEGVALRFEQERTSREAKIVEVRQSLDEFVRARKKVDDRFQAFVTEELGALKGELAREAAARAREDDEIIEALGRYTNKLQHSLKIVNAA 301
R P + G +ATT +TK KL +++ F+ D +++GT+QRRE+DE RL E+R + +++KAL+AEIKR E NK L+ ++ +++ ++F L + RL L ++++LE F EK ++EER + L++ L + + ER+ RL+RE +L+ L D E+ VA +F +ER RE K E++ +LD + + R + DD+FQ EE+ ++ L EA R REDDEII+AL RYT KLQ SLK++N+
Sbjct: 16 RDPGNDDEDEDEGRETVGSLATT--QTKIKLNKMMNAFASFDDNMRIGTRQRRERDEHRLAEMRTEMTRLEKALNAEIKRRFEMNKSLQALCDESVSSMTSRFEGLLANSMDKVDARLAGLAEKIEALEAQFEHEKVHIPQMIEERTNELTEKLGAFMDAFETERKRRLDREAEILKRLFDHEQLVADQFSKERRDREVKATELKDALDMYTKTRLRGDDKFQHVAQEEIAKIQNLLVHEAQTREREDDEIIDALNRYTAKLQDSLKLINST 285
BLAST of EWM27934.1 vs. NCBI_GenBank
Match: gi|698787346|ref|XP_009826705.1| (hypothetical protein H257_04040 [Aphanomyces astaci] >gi|574117794|gb|ETV83275.1| hypothetical protein H257_04040 [Aphanomyces astaci]) HSP 1 Score: 177.948 bits (450), Expect = 2.513e-50 Identity = 104/265 (39.25%), Postives = 159/265 (60.00%), Query Frame = 0
Query: 36 RHMAPPPPSGPGGMATTRSETKQKLASIIDNFSHLDLEVKMGTQQRREKDESRLQELRASVLKIDKALSAEIKRGLERNKLLEKWAEDQLAATANQFAARLEERTQEAQDRLGVLQSRVDSLEEYFTREKEQALSLVEERGSALSQALVELQEGMDAERRDRLEREGRMLRLLGDQEEGVALRFEQERTSREAKIVEVRQSLDEFVRARKKVDDRFQAFVTEELGALKGELAREAAARAREDDEIIEALGRYTNKLQHSLKIVNA 300
R+ G +ATT +TK KL +++ F+ D +++GT+QRRE+DE RL E+RA + +++KAL+AE KR E NK L+ +D +AA + +F L + + RL L ++ +LE F EK ++E R + L+ L + +AER RLERE +L+ L D E+ VA +F +ER RE K E+++SLD + + R + D +FQ EE+ ++ L +E+ R REDDEII+AL RYT KLQ SLK++N+
Sbjct: 14 RNQQDESHDAVGTLATT--QTKTKLNKMMNAFASFDDNMRIGTRQRRERDEHRLAEMRADMTRLEKALNAETKRRFEMNKSLQALCDDSVAAMSAKFDGVLADWMAKVDGRLQGLADKILTLEGQFEYEKVHIPEVIEARTNELTAKLSNFMDAFEAERTRRLEREAEILKRLSDHEQLVADQFSKERRDREVKATELKESLDMYTKTRLRGDGKFQLVAQEEIAKIQNLLVQESQTREREDDEIIDALNRYTAKLQDSLKLINS 276
BLAST of EWM27934.1 vs. NCBI_GenBank
Match: gi|1214680623|gb|OWY99759.1| (SF-assemblin [Phytophthora megakarya]) HSP 1 Score: 177.178 bits (448), Expect = 4.063e-50 Identity = 99/251 (39.44%), Postives = 148/251 (58.96%), Query Frame = 0
Query: 48 GMATTRSETKQKLASIIDNFSHLDLEVKMGTQQRREKDESRLQELRASVLKIDKALSAEIKRGLERNKLLEKWAEDQLAATANQFAARLEERTQEAQDRLGVLQSRVDSLEEYFTREKEQALSLVEERGSALSQALVELQEGMDAERRDRLEREGRMLRLLGDQEEGVALRFEQERTSREAKIVEVRQSLDEFVRARKKVDDRFQAFVTEELGALKGELAREAAARAREDDEIIEALGRYTNKLQHSLKIV 298
GM TRS KL I+ F+ D +++GT+QRREKDE RL E+R + +++ L AEIK+ +E NK L+ + ++Q+A F + L R ++ DRL L + L+ +EK + L+E + + L+Q L+ + D ER+ R ++E +L+ L D E A FE+ER RE K E++ +LD + R + D++F AF EE+ ++ L EA AR REDDEI+EAL RYT KLQ SLK +
Sbjct: 25 GMTATRS----KLEKIMSGFTTFDDVMRIGTRQRREKDEYRLAEMRQEMSRLEHKLEAEIKKRIEMNKSLQNYCDEQVATMTTSFESLLSARAKQVDDRLDHLTQEISDLQTLVAKEKREIPLLIENKTNELTQKLIAFMDSFDEERKRRTDQEAMILKRLSDHEHATAEAFERERHDRELKYSELKNALDTYTTTRIRGDEKFHAFAQEEIAKIQNALVAEAQAREREDDEIVEALNRYTAKLQDSLKTL 271
BLAST of EWM27934.1 vs. NCBI_GenBank
Match: gi|566007685|gb|ETI30596.1| (hypothetical protein F443_22269 [Phytophthora parasitica P1569] >gi|567973812|gb|ETL24466.1| hypothetical protein L916_21532 [Phytophthora parasitica] >gi|568003328|gb|ETL77678.1| hypothetical protein L917_21383 [Phytophthora parasitica] >gi|568033201|gb|ETM30922.1| hypothetical protein L914_21392 [Phytophthora parasitica] >gi|570311403|gb|ETO59351.1| hypothetical protein F444_22260 [Phytophthora parasitica P1976] >gi|570935129|gb|ETP00386.1| hypothetical protein F441_22174 [Phytophthora parasitica CJ01A1] >gi|570965437|gb|ETP28556.1| hypothetical protein F442_22147 [Phytophthora parasitica P10297]) HSP 1 Score: 174.096 bits (440), Expect = 7.975e-49 Identity = 95/253 (37.55%), Postives = 152/253 (60.08%), Query Frame = 0
Query: 48 GMATTRSETKQKLASIIDNFSHLDLEVKMGTQQRREKDESRLQELRASVLKIDKALSAEIKRGLERNKLLEKWAEDQLAATANQFAARLEERTQEAQDRLGVLQSRVDSLEEYFTREKEQALSLVEERGSALSQALVELQEGMDAERRDRLEREGRMLRLLGDQEEGVALRFEQERTSREAKIVEVRQSLDEFVRARKKVDDRFQAFVTEELGALKGELAREAAARAREDDEIIEALGRYTNKLQHSLKIVNA 300
GM TRS KL ++ +F+ D +++GT+QRREKDE RL E+R + +++ L AEIK+ +E NK L+ + ++Q+A F L +R ++ DRL +L +++L+ +EK ++E + + L+Q L+ + + ER+ R +E +L+ L D E A FE+ER RE K +++ +LD + R + D++F AF EE+ ++ L EA AR REDDEI+EAL RYT KLQ SLK++ +
Sbjct: 29 GMTATRS----KLEKLMSSFTTFDDVMRIGTRQRREKDEYRLAEMRQEMNRLENKLEAEIKKRIEMNKSLQNYCDEQVAQMTASFEKLLSDRAKQVDDRLDILTHEIENLQALVAKEKHDIPLMIENKTNELTQKLIAFMDSFEDERQRRTNQEAMILKRLSDHEHATAESFERERRDRELKYSDLKNALDTYSSTRIRGDEKFHAFAQEEIAKIQNALVAEAQAREREDDEIVEALNRYTAKLQDSLKVITS 277
BLAST of EWM27934.1 vs. NCBI_GenBank
Match: gi|675213317|ref|XP_008915543.1| (hypothetical protein PPTG_18986 [Phytophthora parasitica INRA-310] >gi|567945213|gb|ETK71024.1| hypothetical protein L915_21660 [Phytophthora parasitica] >gi|568084192|gb|ETM99130.1| hypothetical protein PPTG_18986 [Phytophthora parasitica INRA-310]) HSP 1 Score: 172.555 bits (436), Expect = 3.421e-48 Identity = 94/253 (37.15%), Postives = 151/253 (59.68%), Query Frame = 0
Query: 48 GMATTRSETKQKLASIIDNFSHLDLEVKMGTQQRREKDESRLQELRASVLKIDKALSAEIKRGLERNKLLEKWAEDQLAATANQFAARLEERTQEAQDRLGVLQSRVDSLEEYFTREKEQALSLVEERGSALSQALVELQEGMDAERRDRLEREGRMLRLLGDQEEGVALRFEQERTSREAKIVEVRQSLDEFVRARKKVDDRFQAFVTEELGALKGELAREAAARAREDDEIIEALGRYTNKLQHSLKIVNA 300
GM TRS KL ++ +F+ D +++GT+QRREKDE RL E+R + +++ L AEIK+ +E NK L+ + ++Q+ F L +R ++ DRL +L +++L+ +EK ++E + + L+Q L+ + + ER+ R +E +L+ L D E A FE+ER RE K +++ +LD + R + D++F AF EE+ ++ L EA AR REDDEI+EAL RYT KLQ SLK++ +
Sbjct: 29 GMTATRS----KLEKLMSSFTTFDDVMRIGTRQRREKDEYRLAEMRQEMNRLENKLEAEIKKRIEMNKSLQNYCDEQVVQMTASFEKLLSDRAKQVDDRLDILTHEIENLQALVAKEKHDIPLMIENKTNELTQKLIAFMDSFEDERQRRTNQEAMILKRLSDHEHATAESFERERRDRELKYSDLKNALDTYSSTRIRGDEKFHAFAQEEIAKIQNALVAEAQAREREDDEIVEALNRYTAKLQDSLKVITS 277 The following BLAST results are available for this feature:
BLAST of EWM27934.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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