EWM27935.1, cds2680 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27935.1 vs. NCBI_GenBank
Match: gi|585110276|gb|EWM27935.1| (heat shock protein 70 [Nannochloropsis gaditana]) HSP 1 Score: 539.265 bits (1388), Expect = 0.000e+0 Identity = 268/268 (100.00%), Postives = 268/268 (100.00%), Query Frame = 0 Query: 1 METGSKEEEGVLPENVAAAQEKKELGNTAFAAKKYDEAIAKYSEAIELDPESHVYYSNRSACHWAKREWALAAADAKTCIEKDPAFLKGYYRLTLAQMEQEDFDGALETIKACLKRQPDNAEMRKQLQLVNAKKKAAEFVRNADSTGAAGRGMSGEELAEIQEQYIAANKELKEVRAKGVAATGEKRRTELTLAELSKVGDDTRLFRSVGKAFMLAARPELLNDLEERVSEAEKRATSMEARHAYLEARLSSHEAILKEAAKAGRASA 268 METGSKEEEGVLPENVAAAQEKKELGNTAFAAKKYDEAIAKYSEAIELDPESHVYYSNRSACHWAKREWALAAADAKTCIEKDPAFLKGYYRLTLAQMEQEDFDGALETIKACLKRQPDNAEMRKQLQLVNAKKKAAEFVRNADSTGAAGRGMSGEELAEIQEQYIAANKELKEVRAKGVAATGEKRRTELTLAELSKVGDDTRLFRSVGKAFMLAARPELLNDLEERVSEAEKRATSMEARHAYLEARLSSHEAILKEAAKAGRASA Sbjct: 1 METGSKEEEGVLPENVAAAQEKKELGNTAFAAKKYDEAIAKYSEAIELDPESHVYYSNRSACHWAKREWALAAADAKTCIEKDPAFLKGYYRLTLAQMEQEDFDGALETIKACLKRQPDNAEMRKQLQLVNAKKKAAEFVRNADSTGAAGRGMSGEELAEIQEQYIAANKELKEVRAKGVAATGEKRRTELTLAELSKVGDDTRLFRSVGKAFMLAARPELLNDLEERVSEAEKRATSMEARHAYLEARLSSHEAILKEAAKAGRASA 268
BLAST of EWM27935.1 vs. NCBI_GenBank
Match: gi|397616937|gb|EJK64205.1| (hypothetical protein THAOC_15084 [Thalassiosira oceanica]) HSP 1 Score: 182.185 bits (461), Expect = 5.298e-52 Identity = 96/258 (37.21%), Postives = 160/258 (62.02%), Query Frame = 0 Query: 19 AQEKKELGNTAFAAKKYDEAIAKYSEAIELDPESHVYYSNRSACHWAKREWALAAADAKTCIEKDPAFLKGYYRLTLAQMEQEDFDGALETIKACLKRQPDNAEMRKQLQLVNAK----KKAAEFVRNADSTGAAGRG-------MSGEELAEIQEQYIAANKELKEVRAKGVAATGEKRRTELTLAELSKV--GDDTRLFRSVGKAFMLAARPELLNDLEERVSEAEKRATSMEARHAYLEARLSSHEAILKEAAKA 263 A+ KKELGN AF+ K YDEAI +Y+ AI +D ++ VY+SNRSACH K++W A DAK CI+ +P F+KGYYRL AQ EQ +FD AL TIK + + DN ++ K + + A+ K+A ++A + G G G +E+A++Q+Q+++ +KE ++VRAK E++ E+T E+ K+ D++ + VGK +ML +R ++++ L+E ++++ K + + +YLE R++ + ++E K+ Sbjct: 84 AEAKKELGNKAFSVKDYDEAIKQYTAAIAIDSKNCVYFSNRSACHAGKKDWENAVKDAKECIKANPTFIKGYYRLASAQSEQNEFDLALSTIKQGMAIEADNNQLVKLQRQIKARKASSKRAKSLAKSASAAGEPGAGGLNLMDSSVSKEVADLQQQFVSTSKEYQQVRAKISYQQRERKSNEITKREMEKLPASSDSKTYMCVGKMYMLTSRDDVMSQLDESITKSTKEEEDLSGKLSYLERRMNGQKQNIQELTKS 341
BLAST of EWM27935.1 vs. NCBI_GenBank
Match: gi|1210528767|dbj|GAX12637.1| (STIP1 homology and U-box containing protein 1 [Fistulifera solaris]) HSP 1 Score: 147.132 bits (370), Expect = 2.388e-39 Identity = 90/256 (35.16%), Postives = 150/256 (58.59%), Query Frame = 0 Query: 16 VAAAQEKKELGNTAFAAKKYDEAIAKYSEAIELDPESHVYYSNRSACHWAKREWALAAADAKTCIEKDPAFLKGYYRLTLAQMEQEDFDGALETIKACLKRQ---PDNAEMRKQLQLVNAKKKAAEFVRNAD-------STGAAGRGMSGEELAEIQEQYIAANKELKEVRAKGVAATGEKRRTELTLAELSKVGDDTRLFRSVGKAFML--AARPELLNDLEERVSEAEKRATSMEARHAYLEARLSSHEAILKE 259 ++ A + KELGN AF+AK Y +A+ YS+AI++DP +HV +SNRSA H W A+ DAK C+ +PAFLKGYYRL +AQ E E+F+ A++T++ L + D A ++K LQ+V K K NA+ ++ + +ELA+++EQ + +EL+ V + ++A + R +E+T +EL ++ D +++VGKAF++ ++ + L+E+ K T + + YLE RL + ++E Sbjct: 1 MSTAAQLKELGNAAFSAKDYAKALELYSQAIKMDPSNHVLFSNRSATHAGLENWEDASKDAKECLRLNPAFLKGYYRLAMAQNELEEFETAIQTLQHGLAQSDGASDVAPLKKLLQIVQQKMKQKAAKSNANNMTSIPVTSAVTLDEATQKELADLREQQLRTAQELQSVEQQIISAQRQVRISEVTESELLELPADRHCYKAVGKAFVMKWLSKEGAIEYLKEQAESGSKLQTDLGQKKEYLERRLQNQRQNIQE 256
BLAST of EWM27935.1 vs. NCBI_GenBank
Match: gi|635362617|emb|CCI48646.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 144.821 bits (364), Expect = 1.319e-38 Identity = 86/232 (37.07%), Postives = 128/232 (55.17%), Query Frame = 0 Query: 16 VAAAQEKKELGNTAFAAKKYDEAIAKYSEAIELDPESHVYYSNRSACHWAKREWALAAADAKTCIEKDPAFLKGYYRLTLAQMEQEDFDGALETIKACLKRQPDNAEMRKQLQLVNAKKKAAEFVRNADSTGAAGRGMSGEELAEIQEQYIAANKELKEVRAKGVAATGEKRRTELTLAELSKVGDDTRLFRSVGKAFMLAARPELLNDLEERVSEAEKRATSMEARHAYLE 247 + AA+E+K LGN F AK +D+AI YSEAI LDPE+H+YYSNRSA + A +W A DAK C++K P+F KGY+RL AQ + A+ T++A Q N L + + K E + + S +EL E+Q Q ++ +EL +A + +KRR L EL + ++T+ ++SVGK F+ P +EE VS K ++E++ +YLE Sbjct: 5 IDAAEEQKTLGNEEFNAKNFDKAIKYYSEAIRLDPENHIYYSNRSAAYGACSQWERAEEDAKVCVQKKPSFAKGYHRLANAQKYLGKREEAIATLRAA---QSANKSAEDALSMRRSSNKVQESMPSKGSGSTVLTPAVMKELQELQPQLVSIQRELDMSKASLTSLEQQKRRLALVAKELETLPEETKTYQSVGKMFVRTDMPSNFKHIEEEVSSIGKTIHTVESQKSYLE 233
BLAST of EWM27935.1 vs. NCBI_GenBank
Match: gi|325190187|emb|CCA24666.1| (conserved hypothetical protein [Albugo laibachii Nc14]) HSP 1 Score: 136.346 bits (342), Expect = 1.092e-35 Identity = 83/226 (36.73%), Postives = 123/226 (54.42%), Query Frame = 0 Query: 16 VAAAQEKKELGNTAFAAKKYDEAIAKYSEAIELDPESHVYYSNRSACHWAKREWALAAADAKTCIEKDPAFLKGYYRLTLAQMEQEDFDGALETIKACLKRQPDNAEMRKQLQLVNAKKKAAEFVRNADSTGAAGRGMSGEELAEIQEQYIAANKELKEVRAKGVAATGEKRRTELTLAELSKVGDDTRLFRSVGKAFMLAARPELLNDLEERVSEAEKRATSMEA 241 + AA+++K LGN F AK +D+AI YSEAI LDPE+H+YYSNRSA + A +W A DAK C++K+P+F KGY+RL AQ + G E A L+ P + K+ Q + K R + +EL ++Q Q ++ +EL+ +A + +KRR L EL + + T+ ++SVGK F+ A P L L+E S EK + +E Sbjct: 5 IDAAEQQKILGNDEFNAKNFDKAIEHYSEAIRLDPENHIYYSNRSAAYGASGQWERAEEDAKLCVQKNPSFAKGYHRLANAQ----KYLGKPEEASATLRSAPPTRRLSKEDQ----ESKTNLMPRKGSGPSVLTPAVM-DELRDLQPQLVSIQRELEMSKASLTSLEQQKRRLALVAKELEALPEQTKTYQSVGKMFVRADMPSNLKHLQEENSSIEKTISKVEV 221
BLAST of EWM27935.1 vs. NCBI_GenBank
Match: gi|675185737|ref|XP_008901753.1| (hypothetical protein PPTG_08783 [Phytophthora parasitica INRA-310] >gi|566029462|gb|ETI52373.1| hypothetical protein F443_04464 [Phytophthora parasitica P1569] >gi|567967074|gb|ETK92260.1| hypothetical protein L915_04337 [Phytophthora parasitica] >gi|568055233|gb|ETM51984.1| hypothetical protein L914_04282 [Phytophthora parasitica] >gi|568097972|gb|ETN12707.1| hypothetical protein PPTG_08783 [Phytophthora parasitica INRA-310] >gi|570992627|gb|ETP50095.1| hypothetical protein F442_04496 [Phytophthora parasitica P10297] >gi|970661310|gb|KUF98789.1| Heat shock protein STI1 [Phytophthora nicotianae]) HSP 1 Score: 134.035 bits (336), Expect = 2.053e-34 Identity = 86/238 (36.13%), Postives = 133/238 (55.88%), Query Frame = 0 Query: 18 AAQEKKELGNTAFAAKKYDEAIAKYSEAIELDPESHVYYSNRSACHWAKREWALAAADAKTCIEKDPAFLKGYYRLTLAQMEQEDFDGALETIK------ACLKRQPDNAEMRKQLQLVNAKKKAAEFVRNADSTGAAGRGMS---GEELAEIQEQYIAANKELKEVRAKGVAATGEKRRTELTLAELSKVGDDTRLFRSVGKAFMLAARPELLNDLEERVSEAEKRATSMEARHAYL 246 AA+ +K LGN F K +D+AI YSEAI L P++HVYYSNRSA + A +W LA DA+ C++++P F KGY+RL AQ + A+ET+K + P ++ +QL A K AA ST GR + +EL E+Q Q+ +EL+++ AK A + +K+R L E++ + + T+ +RS+GK F+ E + L+ +++ +S+EAR YL Sbjct: 7 AAEAQKTLGNEEFNEKNFDKAIECYSEAIRLGPDNHVYYSNRSAAYGAVGKWELAEKDAQECVKRNPKFAKGYHRLANAQQQLGRKKEAIETLKTAQTTATDTDKVPGIKKLLRQLNQEVAPKSAA-------STQGGGRQVPMHVAKELQELQPQFQKIQRELEQIEAKLAAYSRQKKRLALVEREVADLPEGTKTYRSIGKMFLQTDSEENVATLKNDEKHVDEQVSSLEARKNYL 237
BLAST of EWM27935.1 vs. NCBI_GenBank
Match: gi|567995509|gb|ETL45644.1| (hypothetical protein L916_04301 [Phytophthora parasitica] >gi|568024793|gb|ETL98819.1| hypothetical protein L917_04181 [Phytophthora parasitica] >gi|570333198|gb|ETO81146.1| hypothetical protein F444_04484 [Phytophthora parasitica P1976] >gi|570957219|gb|ETP22198.1| hypothetical protein F441_04433 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 132.494 bits (332), Expect = 6.911e-34 Identity = 86/238 (36.13%), Postives = 132/238 (55.46%), Query Frame = 0 Query: 18 AAQEKKELGNTAFAAKKYDEAIAKYSEAIELDPESHVYYSNRSACHWAKREWALAAADAKTCIEKDPAFLKGYYRLTLAQMEQEDFDGALETIK------ACLKRQPDNAEMRKQLQLVNAKKKAAEFVRNADSTGAAGRGMS---GEELAEIQEQYIAANKELKEVRAKGVAATGEKRRTELTLAELSKVGDDTRLFRSVGKAFMLAARPELLNDLEERVSEAEKRATSMEARHAYL 246 AA+ +K LGN F K +D+AI YSEAI L P++HVYYSNRSA + A +W LA DA+ C++++P F KGY+RL AQ + A+ET+K + P ++ +QL A K AA ST GR + +EL E+Q Q+ +EL+++ AK A + +K+R L E++ + + T+ +RS+GK F+ E L+ +++ +S+EAR YL Sbjct: 7 AAEAQKTLGNEEFNEKNFDKAIECYSEAIRLGPDNHVYYSNRSAAYGAVGKWELAEKDAQECVKRNPKFAKGYHRLANAQQQLGRKKEAIETLKTAQTTATDTDKVPGIKKLLRQLNQEVAPKSAA-------STQGGGRQVPMHVAKELQELQPQFQKIQRELEQIEAKLAAYSRQKKRLALVEREVADLPEGTKTYRSIGKMFLQTDSEENAATLKNDEKHVDEQVSSLEARKNYL 237
BLAST of EWM27935.1 vs. NCBI_GenBank
Match: gi|301106336|ref|XP_002902251.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262098871|gb|EEY56923.1| conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 132.494 bits (332), Expect = 8.642e-34 Identity = 86/238 (36.13%), Postives = 135/238 (56.72%), Query Frame = 0 Query: 18 AAQEKKELGNTAFAAKKYDEAIAKYSEAIELDPESHVYYSNRSACHWAKREWALAAADAKTCIEKDPAFLKGYYRLTLAQMEQEDFDGALETIKACLKR--QPDNAE-MRKQLQLVN---AKKKAAEFVRNADSTGAAGRGMS---GEELAEIQEQYIAANKELKEVRAKGVAATGEKRRTELTLAELSKVGDDTRLFRSVGKAFMLAARPELLNDLEERVSEAEKRATSMEARHAYL 246 AA+ +K LGN F K +D+A+ YSEAI LDP+++VYYSNRSA + A +W LA DA+ C++++P F KGY+RL AQ + A+ET+K PD ++K L+ +N A K AA ST GR + +EL E+Q Q+ +EL+++ AK A + +K+R L E++ + + T+ +RS+GK F+ E + ++ +++ +S EAR YL Sbjct: 7 AAEAQKTLGNEEFNEKNFDKAVECYSEAIRLDPDNYVYYSNRSAAYGAVGKWELAEKDAQECVKRNPKFAKGYHRLANAQQQLGRKQEAIETLKTAQTSATDPDKVPGIKKLLRQLNQEVAPKSAA-------STQGGGRQVPMHIAKELQELQPQFQKIQRELEQIEAKLAAYSRQKKRLALVEREMADLPERTKTYRSIGKMFLQTDSEENVATMKSDEKHVDEQVSSYEARKNYL 237
BLAST of EWM27935.1 vs. NCBI_GenBank
Match: gi|695400661|ref|XP_009522571.1| (hypothetical protein PHYSODRAFT_328029 [Phytophthora sojae] >gi|348680038|gb|EGZ19854.1| hypothetical protein PHYSODRAFT_328029 [Phytophthora sojae]) HSP 1 Score: 124.79 bits (312), Expect = 8.945e-31 Identity = 82/227 (36.12%), Postives = 130/227 (57.27%), Query Frame = 0 Query: 23 KELGNTAFAAKKYDEAIAKYSEAIELDPESHVYYSNRSACHWAKREWALAAADAKTCIEKDPAFLKGYYRLTLAQMEQEDFDGALETIKACLKRQPDNAE---MRKQLQLVNAKKKAAEFVRNADSTGAAGRGMSGEELAEIQEQYIAANKELKEVRAKGVAATGEKRRTELTLAELSKVGDDTRLFRSVGKAFMLAARPELLNDLEERVSEAEKRATSMEARHAYL 246 ++LGN F K +D+A+ YSEAI LDPESHVYYSNRSA + A +W LA DA+ C++++P F KGY+RL AQ + A+ET+K L D + ++K L+ +N ++ AA+ A G +EL E+Q Q+ +EL+++ AK A +K+R L E++ + + T+ +RS+GK F+ E ++ +++ +S+EAR YL Sbjct: 23 RKLGNQEFNEKNFDKAVECYSEAIRLDPESHVYYSNRSAAYGALFKWELAEKDAQECVKRNPKFAKGYHRLANAQSQLGRKKEAIETLKTALTTATDPEKAPGIKKLLRQLN-QELAAKSAAPAQGGGRQVPAHIAKELQELQPQFQKIQRELEQIEAKLAAYARQKKRLALVEREVADLPEGTKTYRSIGKMFLQTTSDENTASMKGEDKRVDEQVSSLEARKNYL 248
BLAST of EWM27935.1 vs. NCBI_GenBank
Match: gi|813133644|ref|XP_012197889.1| (hypothetical protein SPRG_03906 [Saprolegnia parasitica CBS 223.65] >gi|641537437|gb|KDO31290.1| hypothetical protein SPRG_03906 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 122.865 bits (307), Expect = 1.996e-30 Identity = 85/250 (34.00%), Postives = 128/250 (51.20%), Query Frame = 0 Query: 19 AQEKKELGNTAFAAKKYDEAIAKYSEAIELDPESHVYYSNRSACHWAKREWALAAADAKTCIEKDPAFLKGYYRLTLAQMEQEDFDGALETIKACLKRQPDNAEMRKQLQLVNAKKKAAEFVRNADSTGAAGRGMSGEELAEIQEQYIAANKELKEVRAKGVAATGEKRRTELTLAELSKVGDDTRLFRSVGKAFMLAARPELLNDLEERVSEAEKRATSMEARHAYLEARLSSHEAILKEAAKAGRASA 268 A+++K LGN F AK YD+AI YSEAI L P +H+YYSNRSA + A +W A DAK C+ +P+F KG RL AQ + D A+ T + L N A+ + ++ A +EL E+Q Q+ ++EL+ + AK A + EK+R +LT ELS + T + S+GK F+ E + L ++ + + ++EAR YLE + +S E + E + SA Sbjct: 5 AEQEKNLGNEEFNAKNYDQAIVHYSEAIRLAPGNHIYYSNRSAAYGAINQWEKAEQDAKECVRLNPSFKKGLLRLANAQRQLGKNDDAVAT-----------------MALANGGAAPAKRPKQENAPLPAS---VQKELQELQPQFQTLHRELETIEAKLGAFSREKKRIQLTKEELSALPSGTHTYASIGKMFLEMTTEENVARLTTNAAKMDDQVAALEARKQYLERQKTSLETNIAELLAQCKTSA 234 The following BLAST results are available for this feature:
BLAST of EWM27935.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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