EWM27935.1, cds2680 (CDS) Nannochloropsis gaditana

Overview
NameEWM27935.1
Unique Namecds2680
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002459.1:965364..965434 -
Alignment locationCM002459.1:964524..965259 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM27935.1
Productheat shock protein 70
Orig transcript idgnl|cribi|Naga_100008g57.7827.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:965364..965434 -
CM002459.1supercontigCM002459.1:964524..965259 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0006457protein folding
Vocabulary: Cellular Component
TermDefinition
GO:0005575cellular_component
GO:0016272prefoldin complex
Vocabulary: Molecular Function
TermDefinition
GO:0051082unfolded protein binding
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR013026TPR-contain_dom
IPR009053Prefoldin
IPR002777PFD_beta-like
IPR011990TPR-like_helical_dom
IPR001440TPR_1
IPR019734TPR_repeat
Homology
BLAST of EWM27935.1 vs. NCBI_GenBank
Match: gi|585110276|gb|EWM27935.1| (heat shock protein 70 [Nannochloropsis gaditana])

HSP 1 Score: 539.265 bits (1388), Expect = 0.000e+0
Identity = 268/268 (100.00%), Postives = 268/268 (100.00%), Query Frame = 0
Query:    1 METGSKEEEGVLPENVAAAQEKKELGNTAFAAKKYDEAIAKYSEAIELDPESHVYYSNRSACHWAKREWALAAADAKTCIEKDPAFLKGYYRLTLAQMEQEDFDGALETIKACLKRQPDNAEMRKQLQLVNAKKKAAEFVRNADSTGAAGRGMSGEELAEIQEQYIAANKELKEVRAKGVAATGEKRRTELTLAELSKVGDDTRLFRSVGKAFMLAARPELLNDLEERVSEAEKRATSMEARHAYLEARLSSHEAILKEAAKAGRASA 268
            METGSKEEEGVLPENVAAAQEKKELGNTAFAAKKYDEAIAKYSEAIELDPESHVYYSNRSACHWAKREWALAAADAKTCIEKDPAFLKGYYRLTLAQMEQEDFDGALETIKACLKRQPDNAEMRKQLQLVNAKKKAAEFVRNADSTGAAGRGMSGEELAEIQEQYIAANKELKEVRAKGVAATGEKRRTELTLAELSKVGDDTRLFRSVGKAFMLAARPELLNDLEERVSEAEKRATSMEARHAYLEARLSSHEAILKEAAKAGRASA
Sbjct:    1 METGSKEEEGVLPENVAAAQEKKELGNTAFAAKKYDEAIAKYSEAIELDPESHVYYSNRSACHWAKREWALAAADAKTCIEKDPAFLKGYYRLTLAQMEQEDFDGALETIKACLKRQPDNAEMRKQLQLVNAKKKAAEFVRNADSTGAAGRGMSGEELAEIQEQYIAANKELKEVRAKGVAATGEKRRTELTLAELSKVGDDTRLFRSVGKAFMLAARPELLNDLEERVSEAEKRATSMEARHAYLEARLSSHEAILKEAAKAGRASA 268          
BLAST of EWM27935.1 vs. NCBI_GenBank
Match: gi|397616937|gb|EJK64205.1| (hypothetical protein THAOC_15084 [Thalassiosira oceanica])

HSP 1 Score: 182.185 bits (461), Expect = 5.298e-52
Identity = 96/258 (37.21%), Postives = 160/258 (62.02%), Query Frame = 0
Query:   19 AQEKKELGNTAFAAKKYDEAIAKYSEAIELDPESHVYYSNRSACHWAKREWALAAADAKTCIEKDPAFLKGYYRLTLAQMEQEDFDGALETIKACLKRQPDNAEMRKQLQLVNAK----KKAAEFVRNADSTGAAGRG-------MSGEELAEIQEQYIAANKELKEVRAKGVAATGEKRRTELTLAELSKV--GDDTRLFRSVGKAFMLAARPELLNDLEERVSEAEKRATSMEARHAYLEARLSSHEAILKEAAKA 263
            A+ KKELGN AF+ K YDEAI +Y+ AI +D ++ VY+SNRSACH  K++W  A  DAK CI+ +P F+KGYYRL  AQ EQ +FD AL TIK  +  + DN ++ K  + + A+    K+A    ++A + G  G G          +E+A++Q+Q+++ +KE ++VRAK      E++  E+T  E+ K+    D++ +  VGK +ML +R ++++ L+E ++++ K    +  + +YLE R++  +  ++E  K+
Sbjct:   84 AEAKKELGNKAFSVKDYDEAIKQYTAAIAIDSKNCVYFSNRSACHAGKKDWENAVKDAKECIKANPTFIKGYYRLASAQSEQNEFDLALSTIKQGMAIEADNNQLVKLQRQIKARKASSKRAKSLAKSASAAGEPGAGGLNLMDSSVSKEVADLQQQFVSTSKEYQQVRAKISYQQRERKSNEITKREMEKLPASSDSKTYMCVGKMYMLTSRDDVMSQLDESITKSTKEEEDLSGKLSYLERRMNGQKQNIQELTKS 341          
BLAST of EWM27935.1 vs. NCBI_GenBank
Match: gi|1210528767|dbj|GAX12637.1| (STIP1 homology and U-box containing protein 1 [Fistulifera solaris])

HSP 1 Score: 147.132 bits (370), Expect = 2.388e-39
Identity = 90/256 (35.16%), Postives = 150/256 (58.59%), Query Frame = 0
Query:   16 VAAAQEKKELGNTAFAAKKYDEAIAKYSEAIELDPESHVYYSNRSACHWAKREWALAAADAKTCIEKDPAFLKGYYRLTLAQMEQEDFDGALETIKACLKRQ---PDNAEMRKQLQLVNAKKKAAEFVRNAD-------STGAAGRGMSGEELAEIQEQYIAANKELKEVRAKGVAATGEKRRTELTLAELSKVGDDTRLFRSVGKAFML--AARPELLNDLEERVSEAEKRATSMEARHAYLEARLSSHEAILKE 259
            ++ A + KELGN AF+AK Y +A+  YS+AI++DP +HV +SNRSA H     W  A+ DAK C+  +PAFLKGYYRL +AQ E E+F+ A++T++  L +     D A ++K LQ+V  K K      NA+       ++       + +ELA+++EQ +   +EL+ V  + ++A  + R +E+T +EL ++  D   +++VGKAF++   ++   +  L+E+     K  T +  +  YLE RL +    ++E
Sbjct:    1 MSTAAQLKELGNAAFSAKDYAKALELYSQAIKMDPSNHVLFSNRSATHAGLENWEDASKDAKECLRLNPAFLKGYYRLAMAQNELEEFETAIQTLQHGLAQSDGASDVAPLKKLLQIVQQKMKQKAAKSNANNMTSIPVTSAVTLDEATQKELADLREQQLRTAQELQSVEQQIISAQRQVRISEVTESELLELPADRHCYKAVGKAFVMKWLSKEGAIEYLKEQAESGSKLQTDLGQKKEYLERRLQNQRQNIQE 256          
BLAST of EWM27935.1 vs. NCBI_GenBank
Match: gi|635362617|emb|CCI48646.1| (unnamed protein product [Albugo candida])

HSP 1 Score: 144.821 bits (364), Expect = 1.319e-38
Identity = 86/232 (37.07%), Postives = 128/232 (55.17%), Query Frame = 0
Query:   16 VAAAQEKKELGNTAFAAKKYDEAIAKYSEAIELDPESHVYYSNRSACHWAKREWALAAADAKTCIEKDPAFLKGYYRLTLAQMEQEDFDGALETIKACLKRQPDNAEMRKQLQLVNAKKKAAEFVRNADSTGAAGRGMSGEELAEIQEQYIAANKELKEVRAKGVAATGEKRRTELTLAELSKVGDDTRLFRSVGKAFMLAARPELLNDLEERVSEAEKRATSMEARHAYLE 247
            + AA+E+K LGN  F AK +D+AI  YSEAI LDPE+H+YYSNRSA + A  +W  A  DAK C++K P+F KGY+RL  AQ      + A+ T++A    Q  N      L +  +  K  E + +  S          +EL E+Q Q ++  +EL   +A   +   +KRR  L   EL  + ++T+ ++SVGK F+    P     +EE VS   K   ++E++ +YLE
Sbjct:    5 IDAAEEQKTLGNEEFNAKNFDKAIKYYSEAIRLDPENHIYYSNRSAAYGACSQWERAEEDAKVCVQKKPSFAKGYHRLANAQKYLGKREEAIATLRAA---QSANKSAEDALSMRRSSNKVQESMPSKGSGSTVLTPAVMKELQELQPQLVSIQRELDMSKASLTSLEQQKRRLALVAKELETLPEETKTYQSVGKMFVRTDMPSNFKHIEEEVSSIGKTIHTVESQKSYLE 233          
BLAST of EWM27935.1 vs. NCBI_GenBank
Match: gi|325190187|emb|CCA24666.1| (conserved hypothetical protein [Albugo laibachii Nc14])

HSP 1 Score: 136.346 bits (342), Expect = 1.092e-35
Identity = 83/226 (36.73%), Postives = 123/226 (54.42%), Query Frame = 0
Query:   16 VAAAQEKKELGNTAFAAKKYDEAIAKYSEAIELDPESHVYYSNRSACHWAKREWALAAADAKTCIEKDPAFLKGYYRLTLAQMEQEDFDGALETIKACLKRQPDNAEMRKQLQLVNAKKKAAEFVRNADSTGAAGRGMSGEELAEIQEQYIAANKELKEVRAKGVAATGEKRRTELTLAELSKVGDDTRLFRSVGKAFMLAARPELLNDLEERVSEAEKRATSMEA 241
            + AA+++K LGN  F AK +D+AI  YSEAI LDPE+H+YYSNRSA + A  +W  A  DAK C++K+P+F KGY+RL  AQ     + G  E   A L+  P    + K+ Q    + K     R           +  +EL ++Q Q ++  +EL+  +A   +   +KRR  L   EL  + + T+ ++SVGK F+ A  P  L  L+E  S  EK  + +E 
Sbjct:    5 IDAAEQQKILGNDEFNAKNFDKAIEHYSEAIRLDPENHIYYSNRSAAYGASGQWERAEEDAKLCVQKNPSFAKGYHRLANAQ----KYLGKPEEASATLRSAPPTRRLSKEDQ----ESKTNLMPRKGSGPSVLTPAVM-DELRDLQPQLVSIQRELEMSKASLTSLEQQKRRLALVAKELEALPEQTKTYQSVGKMFVRADMPSNLKHLQEENSSIEKTISKVEV 221          
BLAST of EWM27935.1 vs. NCBI_GenBank
Match: gi|675185737|ref|XP_008901753.1| (hypothetical protein PPTG_08783 [Phytophthora parasitica INRA-310] >gi|566029462|gb|ETI52373.1| hypothetical protein F443_04464 [Phytophthora parasitica P1569] >gi|567967074|gb|ETK92260.1| hypothetical protein L915_04337 [Phytophthora parasitica] >gi|568055233|gb|ETM51984.1| hypothetical protein L914_04282 [Phytophthora parasitica] >gi|568097972|gb|ETN12707.1| hypothetical protein PPTG_08783 [Phytophthora parasitica INRA-310] >gi|570992627|gb|ETP50095.1| hypothetical protein F442_04496 [Phytophthora parasitica P10297] >gi|970661310|gb|KUF98789.1| Heat shock protein STI1 [Phytophthora nicotianae])

HSP 1 Score: 134.035 bits (336), Expect = 2.053e-34
Identity = 86/238 (36.13%), Postives = 133/238 (55.88%), Query Frame = 0
Query:   18 AAQEKKELGNTAFAAKKYDEAIAKYSEAIELDPESHVYYSNRSACHWAKREWALAAADAKTCIEKDPAFLKGYYRLTLAQMEQEDFDGALETIK------ACLKRQPDNAEMRKQLQLVNAKKKAAEFVRNADSTGAAGRGMS---GEELAEIQEQYIAANKELKEVRAKGVAATGEKRRTELTLAELSKVGDDTRLFRSVGKAFMLAARPELLNDLEERVSEAEKRATSMEARHAYL 246
            AA+ +K LGN  F  K +D+AI  YSEAI L P++HVYYSNRSA + A  +W LA  DA+ C++++P F KGY+RL  AQ +      A+ET+K          + P   ++ +QL    A K AA       ST   GR +     +EL E+Q Q+    +EL+++ AK  A + +K+R  L   E++ + + T+ +RS+GK F+     E +  L+      +++ +S+EAR  YL
Sbjct:    7 AAEAQKTLGNEEFNEKNFDKAIECYSEAIRLGPDNHVYYSNRSAAYGAVGKWELAEKDAQECVKRNPKFAKGYHRLANAQQQLGRKKEAIETLKTAQTTATDTDKVPGIKKLLRQLNQEVAPKSAA-------STQGGGRQVPMHVAKELQELQPQFQKIQRELEQIEAKLAAYSRQKKRLALVEREVADLPEGTKTYRSIGKMFLQTDSEENVATLKNDEKHVDEQVSSLEARKNYL 237          
BLAST of EWM27935.1 vs. NCBI_GenBank
Match: gi|567995509|gb|ETL45644.1| (hypothetical protein L916_04301 [Phytophthora parasitica] >gi|568024793|gb|ETL98819.1| hypothetical protein L917_04181 [Phytophthora parasitica] >gi|570333198|gb|ETO81146.1| hypothetical protein F444_04484 [Phytophthora parasitica P1976] >gi|570957219|gb|ETP22198.1| hypothetical protein F441_04433 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 132.494 bits (332), Expect = 6.911e-34
Identity = 86/238 (36.13%), Postives = 132/238 (55.46%), Query Frame = 0
Query:   18 AAQEKKELGNTAFAAKKYDEAIAKYSEAIELDPESHVYYSNRSACHWAKREWALAAADAKTCIEKDPAFLKGYYRLTLAQMEQEDFDGALETIK------ACLKRQPDNAEMRKQLQLVNAKKKAAEFVRNADSTGAAGRGMS---GEELAEIQEQYIAANKELKEVRAKGVAATGEKRRTELTLAELSKVGDDTRLFRSVGKAFMLAARPELLNDLEERVSEAEKRATSMEARHAYL 246
            AA+ +K LGN  F  K +D+AI  YSEAI L P++HVYYSNRSA + A  +W LA  DA+ C++++P F KGY+RL  AQ +      A+ET+K          + P   ++ +QL    A K AA       ST   GR +     +EL E+Q Q+    +EL+++ AK  A + +K+R  L   E++ + + T+ +RS+GK F+     E    L+      +++ +S+EAR  YL
Sbjct:    7 AAEAQKTLGNEEFNEKNFDKAIECYSEAIRLGPDNHVYYSNRSAAYGAVGKWELAEKDAQECVKRNPKFAKGYHRLANAQQQLGRKKEAIETLKTAQTTATDTDKVPGIKKLLRQLNQEVAPKSAA-------STQGGGRQVPMHVAKELQELQPQFQKIQRELEQIEAKLAAYSRQKKRLALVEREVADLPEGTKTYRSIGKMFLQTDSEENAATLKNDEKHVDEQVSSLEARKNYL 237          
BLAST of EWM27935.1 vs. NCBI_GenBank
Match: gi|301106336|ref|XP_002902251.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262098871|gb|EEY56923.1| conserved hypothetical protein [Phytophthora infestans T30-4])

HSP 1 Score: 132.494 bits (332), Expect = 8.642e-34
Identity = 86/238 (36.13%), Postives = 135/238 (56.72%), Query Frame = 0
Query:   18 AAQEKKELGNTAFAAKKYDEAIAKYSEAIELDPESHVYYSNRSACHWAKREWALAAADAKTCIEKDPAFLKGYYRLTLAQMEQEDFDGALETIKACLKR--QPDNAE-MRKQLQLVN---AKKKAAEFVRNADSTGAAGRGMS---GEELAEIQEQYIAANKELKEVRAKGVAATGEKRRTELTLAELSKVGDDTRLFRSVGKAFMLAARPELLNDLEERVSEAEKRATSMEARHAYL 246
            AA+ +K LGN  F  K +D+A+  YSEAI LDP+++VYYSNRSA + A  +W LA  DA+ C++++P F KGY+RL  AQ +      A+ET+K        PD    ++K L+ +N   A K AA       ST   GR +     +EL E+Q Q+    +EL+++ AK  A + +K+R  L   E++ + + T+ +RS+GK F+     E +  ++      +++ +S EAR  YL
Sbjct:    7 AAEAQKTLGNEEFNEKNFDKAVECYSEAIRLDPDNYVYYSNRSAAYGAVGKWELAEKDAQECVKRNPKFAKGYHRLANAQQQLGRKQEAIETLKTAQTSATDPDKVPGIKKLLRQLNQEVAPKSAA-------STQGGGRQVPMHIAKELQELQPQFQKIQRELEQIEAKLAAYSRQKKRLALVEREMADLPERTKTYRSIGKMFLQTDSEENVATMKSDEKHVDEQVSSYEARKNYL 237          
BLAST of EWM27935.1 vs. NCBI_GenBank
Match: gi|695400661|ref|XP_009522571.1| (hypothetical protein PHYSODRAFT_328029 [Phytophthora sojae] >gi|348680038|gb|EGZ19854.1| hypothetical protein PHYSODRAFT_328029 [Phytophthora sojae])

HSP 1 Score: 124.79 bits (312), Expect = 8.945e-31
Identity = 82/227 (36.12%), Postives = 130/227 (57.27%), Query Frame = 0
Query:   23 KELGNTAFAAKKYDEAIAKYSEAIELDPESHVYYSNRSACHWAKREWALAAADAKTCIEKDPAFLKGYYRLTLAQMEQEDFDGALETIKACLKRQPDNAE---MRKQLQLVNAKKKAAEFVRNADSTGAAGRGMSGEELAEIQEQYIAANKELKEVRAKGVAATGEKRRTELTLAELSKVGDDTRLFRSVGKAFMLAARPELLNDLEERVSEAEKRATSMEARHAYL 246
            ++LGN  F  K +D+A+  YSEAI LDPESHVYYSNRSA + A  +W LA  DA+ C++++P F KGY+RL  AQ +      A+ET+K  L    D  +   ++K L+ +N ++ AA+    A   G        +EL E+Q Q+    +EL+++ AK  A   +K+R  L   E++ + + T+ +RS+GK F+     E    ++      +++ +S+EAR  YL
Sbjct:   23 RKLGNQEFNEKNFDKAVECYSEAIRLDPESHVYYSNRSAAYGALFKWELAEKDAQECVKRNPKFAKGYHRLANAQSQLGRKKEAIETLKTALTTATDPEKAPGIKKLLRQLN-QELAAKSAAPAQGGGRQVPAHIAKELQELQPQFQKIQRELEQIEAKLAAYARQKKRLALVEREVADLPEGTKTYRSIGKMFLQTTSDENTASMKGEDKRVDEQVSSLEARKNYL 248          
BLAST of EWM27935.1 vs. NCBI_GenBank
Match: gi|813133644|ref|XP_012197889.1| (hypothetical protein SPRG_03906 [Saprolegnia parasitica CBS 223.65] >gi|641537437|gb|KDO31290.1| hypothetical protein SPRG_03906 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 122.865 bits (307), Expect = 1.996e-30
Identity = 85/250 (34.00%), Postives = 128/250 (51.20%), Query Frame = 0
Query:   19 AQEKKELGNTAFAAKKYDEAIAKYSEAIELDPESHVYYSNRSACHWAKREWALAAADAKTCIEKDPAFLKGYYRLTLAQMEQEDFDGALETIKACLKRQPDNAEMRKQLQLVNAKKKAAEFVRNADSTGAAGRGMSGEELAEIQEQYIAANKELKEVRAKGVAATGEKRRTELTLAELSKVGDDTRLFRSVGKAFMLAARPELLNDLEERVSEAEKRATSMEARHAYLEARLSSHEAILKEAAKAGRASA 268
            A+++K LGN  F AK YD+AI  YSEAI L P +H+YYSNRSA + A  +W  A  DAK C+  +P+F KG  RL  AQ +    D A+ T                 + L N     A+  +  ++   A      +EL E+Q Q+   ++EL+ + AK  A + EK+R +LT  ELS +   T  + S+GK F+     E +  L    ++ + +  ++EAR  YLE + +S E  + E     + SA
Sbjct:    5 AEQEKNLGNEEFNAKNYDQAIVHYSEAIRLAPGNHIYYSNRSAAYGAINQWEKAEQDAKECVRLNPSFKKGLLRLANAQRQLGKNDDAVAT-----------------MALANGGAAPAKRPKQENAPLPAS---VQKELQELQPQFQTLHRELETIEAKLGAFSREKKRIQLTKEELSALPSGTHTYASIGKMFLEMTTEENVARLTTNAAKMDDQVAALEARKQYLERQKTSLETNIAELLAQCKTSA 234          
The following BLAST results are available for this feature:
BLAST of EWM27935.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585110276|gb|EWM27935.1|0.000e+0100.00heat shock protein 70 [Nannochloropsis gaditana][more]
gi|397616937|gb|EJK64205.1|5.298e-5237.21hypothetical protein THAOC_15084 [Thalassiosira oc... [more]
gi|1210528767|dbj|GAX12637.1|2.388e-3935.16STIP1 homology and U-box containing protein 1 [Fis... [more]
gi|635362617|emb|CCI48646.1|1.319e-3837.07unnamed protein product [Albugo candida][more]
gi|325190187|emb|CCA24666.1|1.092e-3536.73conserved hypothetical protein [Albugo laibachii N... [more]
gi|675185737|ref|XP_008901753.1|2.053e-3436.13hypothetical protein PPTG_08783 [Phytophthora para... [more]
gi|567995509|gb|ETL45644.1|6.911e-3436.13hypothetical protein L916_04301 [Phytophthora para... [more]
gi|301106336|ref|XP_002902251.1|8.642e-3436.13conserved hypothetical protein [Phytophthora infes... [more]
gi|695400661|ref|XP_009522571.1|8.945e-3136.12hypothetical protein PHYSODRAFT_328029 [Phytophtho... [more]
gi|813133644|ref|XP_012197889.1|1.996e-3034.00hypothetical protein SPRG_03906 [Saprolegnia paras... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2688rna2688Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications