EWM27975.1, cds2677 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27975.1 vs. NCBI_GenBank
Match: gi|585110316|gb|EWM27975.1| (hypothetical protein Naga_100008g55 [Nannochloropsis gaditana]) HSP 1 Score: 348.206 bits (892), Expect = 1.687e-121 Identity = 165/165 (100.00%), Postives = 165/165 (100.00%), Query Frame = 0 Query: 1 MKTGKAHAYAQRWCWALVPNTGRNGSIGALSSKLCGFALAMLMMVVMMVAINRSIRVSTPANKPDAWFTAFEHDKEGMREWLHDCRYIYLDVGSNRGIQVRKIFEPDKYPNAAVLPVYREVFGKDWERRPEVSLHVCDMLSDDVLLLDHSRCVNSNLCHSFIFYV 165 MKTGKAHAYAQRWCWALVPNTGRNGSIGALSSKLCGFALAMLMMVVMMVAINRSIRVSTPANKPDAWFTAFEHDKEGMREWLHDCRYIYLDVGSNRGIQVRKIFEPDKYPNAAVLPVYREVFGKDWERRPEVSLHVCDMLSDDVLLLDHSRCVNSNLCHSFIFYV Sbjct: 1 MKTGKAHAYAQRWCWALVPNTGRNGSIGALSSKLCGFALAMLMMVVMMVAINRSIRVSTPANKPDAWFTAFEHDKEGMREWLHDCRYIYLDVGSNRGIQVRKIFEPDKYPNAAVLPVYREVFGKDWERRPEVSLHVCDMLSDDVLLLDHSRCVNSNLCHSFIFYV 165
BLAST of EWM27975.1 vs. NCBI_GenBank
Match: gi|1129173228|gb|OLP82652.1| (hypothetical protein AK812_SmicGene36688 [Symbiodinium microadriaticum]) HSP 1 Score: 70.0922 bits (170), Expect = 5.375e-11 Identity = 31/64 (48.44%), Postives = 41/64 (64.06%), Query Frame = 0 Query: 77 GMREWLHDCRYIYLDVGSNRGIQVRKIFEPDKYPNAAVLPVYREVFGKDWERR-PEVSLHVCDM 139 G WL +CR IYLD+GSN G+QVRK FEP++YP A VLP++ FG R+ P +C + Sbjct: 38 GHPPWLRECRKIYLDIGSNIGVQVRKFFEPERYPGAEVLPLFDRSFGPAARRKEPSAQTGLCAL 101
BLAST of EWM27975.1 vs. NCBI_GenBank
Match: gi|929748473|ref|XP_014149220.1| (hypothetical protein SARC_12155 [Sphaeroforma arctica JP610] >gi|906940080|gb|KNC75318.1| hypothetical protein SARC_12155 [Sphaeroforma arctica JP610]) HSP 1 Score: 60.4622 bits (145), Expect = 6.457e-8 Identity = 26/53 (49.06%), Postives = 36/53 (67.92%), Query Frame = 0 Query: 82 LHDCRYIYLDVGSNRGIQVRKIFEPDKYPNAAVLPVYREVFGKDWERRPEVSL 134 L C +IYLD GSNRG+QVRK+++PD YP AA+ ++ FG R+P S+ Sbjct: 50 LDGCYHIYLDCGSNRGVQVRKLYQPDLYPKAAINKIFHNEFGDVHSRKPVCSV 102
BLAST of EWM27975.1 vs. NCBI_GenBank
Match: gi|929769544|ref|XP_014159705.1| (hypothetical protein SARC_02028 [Sphaeroforma arctica JP610] >gi|906957453|gb|KNC85803.1| hypothetical protein SARC_02028 [Sphaeroforma arctica JP610]) HSP 1 Score: 60.077 bits (144), Expect = 8.656e-8 Identity = 25/56 (44.64%), Postives = 39/56 (69.64%), Query Frame = 0 Query: 74 DKEGMREWLHDCRYIYLDVGSNRGIQVRKIFEPDKYPNAAVLPVYREVFGKDWERR 129 D E + L C ++YLD GSNRG+QV+K++EP+ YP+ V ++++FGK +RR Sbjct: 11 DSENVPNELEGCYHVYLDCGSNRGVQVQKLYEPELYPDVPVNTFFKKIFGKVAKRR 66
BLAST of EWM27975.1 vs. NCBI_GenBank
Match: gi|612385035|ref|XP_007508039.1| (unnamed protein product [Bathycoccus prasinos] >gi|412992032|emb|CCO20758.1| unnamed protein product [Bathycoccus prasinos]) HSP 1 Score: 60.077 bits (144), Expect = 9.890e-8 Identity = 25/47 (53.19%), Postives = 35/47 (74.47%), Query Frame = 0 Query: 79 REWLHDCRYIYLDVGSNRGIQVRKIFEPDKYPNAAVLPVYREVFGKD 125 R++ C +YLDVGSN G+QVRK+FEP+KY A +LP++ FGK+ Sbjct: 54 RKYADGCYNVYLDVGSNIGVQVRKLFEPEKYSGALILPIFDIHFGKE 100
BLAST of EWM27975.1 vs. NCBI_GenBank
Match: gi|308799882|ref|XP_003074722.1| (unnamed protein product [Ostreococcus tauri]) HSP 1 Score: 57.7658 bits (138), Expect = 7.724e-7 Identity = 21/41 (51.22%), Postives = 32/41 (78.05%), Query Frame = 0 Query: 83 HDCRYIYLDVGSNRGIQVRKIFEPDKYPNAAVLPVYREVFG 123 H C + YLD+G+N G+Q+RK++EP+KYP+A V V+ + FG Sbjct: 44 HGCEHFYLDMGTNIGVQIRKLYEPEKYPSAPVHAVFEKYFG 84
BLAST of EWM27975.1 vs. NCBI_GenBank
Match: gi|1199286488|gb|OUS41638.1| (hypothetical protein BE221DRAFT_188190 [Ostreococcus tauri]) HSP 1 Score: 57.3806 bits (137), Expect = 9.500e-7 Identity = 21/41 (51.22%), Postives = 32/41 (78.05%), Query Frame = 0 Query: 83 HDCRYIYLDVGSNRGIQVRKIFEPDKYPNAAVLPVYREVFG 123 H C + YLD+G+N G+Q+RK++EP+KYP+A V V+ + FG Sbjct: 69 HGCEHFYLDMGTNIGVQIRKLYEPEKYPSAPVHAVFEKYFG 109 The following BLAST results are available for this feature:
BLAST of EWM27975.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 7
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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