EWM27929.1, cds2671 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27929.1 vs. NCBI_GenBank
Match: gi|585110270|gb|EWM27929.1| (hypothetical protein Naga_100008g48 [Nannochloropsis gaditana]) HSP 1 Score: 629.787 bits (1623), Expect = 0.000e+0 Identity = 305/305 (100.00%), Postives = 305/305 (100.00%), Query Frame = 0 Query: 1 MDVFKRALDFNVKGSESVQVRTAMGGLVTMASAGLCFLLLVSELLSFSRVEIVNHMTVDSTAPSLETTIPINFHITFPLVKCKDISFDAESTRGDAVVYLASQDVRKTPATGVESSLRPPEGQTGCTVEGTLFTGKVAGEFRINLGEDVPLQLAPMVAVEFKTNYTAHKIHHFSVGERKENKIYPLDGLETIPDGEGHYLYNLRIIPTVEQPLYGSPEHNFEFAFQESLHKGTRLSPGMTALTLSAPGIHFFYEFYPVMVEYTHQRTPFLQFVTQALAVVGGIFTMSNILDSILYQSARVMKKMA 305 MDVFKRALDFNVKGSESVQVRTAMGGLVTMASAGLCFLLLVSELLSFSRVEIVNHMTVDSTAPSLETTIPINFHITFPLVKCKDISFDAESTRGDAVVYLASQDVRKTPATGVESSLRPPEGQTGCTVEGTLFTGKVAGEFRINLGEDVPLQLAPMVAVEFKTNYTAHKIHHFSVGERKENKIYPLDGLETIPDGEGHYLYNLRIIPTVEQPLYGSPEHNFEFAFQESLHKGTRLSPGMTALTLSAPGIHFFYEFYPVMVEYTHQRTPFLQFVTQALAVVGGIFTMSNILDSILYQSARVMKKMA Sbjct: 1 MDVFKRALDFNVKGSESVQVRTAMGGLVTMASAGLCFLLLVSELLSFSRVEIVNHMTVDSTAPSLETTIPINFHITFPLVKCKDISFDAESTRGDAVVYLASQDVRKTPATGVESSLRPPEGQTGCTVEGTLFTGKVAGEFRINLGEDVPLQLAPMVAVEFKTNYTAHKIHHFSVGERKENKIYPLDGLETIPDGEGHYLYNLRIIPTVEQPLYGSPEHNFEFAFQESLHKGTRLSPGMTALTLSAPGIHFFYEFYPVMVEYTHQRTPFLQFVTQALAVVGGIFTMSNILDSILYQSARVMKKMA 305
BLAST of EWM27929.1 vs. NCBI_GenBank
Match: gi|673028250|ref|XP_008868086.1| (hypothetical protein H310_05207 [Aphanomyces invadans] >gi|574476859|gb|ETW03857.1| hypothetical protein H310_05207 [Aphanomyces invadans]) HSP 1 Score: 144.821 bits (364), Expect = 8.014e-38 Identity = 96/293 (32.76%), Postives = 149/293 (50.85%), Query Frame = 0 Query: 6 RALDFNVKGSESVQVRTAMGGLVTMASAGLCFLLLVSELLSFSRVEIVNHMTVDSTAPSLETTIPINFHITFPLVKCKDISFDAESTRGDAVVYLASQDVRKTPATGVESSLRPPEGQT-GCTVEGTLFTGKVAGEFRINLGEDVPLQL-APMVAVEFKTNYTAHKIHHFSVGERKENKIYPL-DGLETIPDGEGHYLYNLRIIPTVEQPLYGSPEHNFEFAFQESLHKGTRLSPGMTALTLSAPGIHFFYEFYPVMVEYTHQRTPFLQFVTQALAVVGGIFTMSNILDSILY 295 R D KG E +Q +T G L+T+ S + FLL +SEL ++ ++VN M VD T P + + I ITF KCKD++ DA +G+ + LA ++ P P G++ GC + G + KVAG ++ + L + + M +EF +H +H S G N + PL D +++ Y Y + I+PT PLYG P ++++ E + +S PG+ F YEF P+ VEY + FLQFVT A+VGG+F ++ I+DS++Y Sbjct: 6 RQYDVYTKGVEGIQEKTTCGALITVISVAIVFLLFLSELGIYTTTQVVNRMHVD-TVPQ-DAVMHIEVDITFLHEKCKDVAMDASDVKGNKDL-LADSNITAVPV---------PSGESEGCRLTGFVDVHKVAG--VVSFAHEGSLNMFSFMDFLEFNA---SHIVHRLSFGPDIPNMVNPLQDVHKSVEKNVALYKYGVSIVPTQYTPLYGPPIQTYQYSVTEYTSEPNE------GGVMSFPGVSFMYEFSPIKVEYVESKPSFLQFVTSTSAIVGGVFAVARIVDSVIY 275
BLAST of EWM27929.1 vs. NCBI_GenBank
Match: gi|698809856|ref|XP_009837957.1| (hypothetical protein, variant [Aphanomyces astaci] >gi|574107215|gb|ETV72729.1| hypothetical protein, variant [Aphanomyces astaci]) HSP 1 Score: 144.821 bits (364), Expect = 8.632e-38 Identity = 96/298 (32.21%), Postives = 149/298 (50.00%), Query Frame = 0 Query: 6 RALDFNVKGSESVQVRTAMGGLVTMASAGLCFLLLVSELLSFSRVEIVNHMTVDSTAPSLETTIPINFHITFPLVKCKDISFDAESTRGDAVVYLASQDVRKTPATGVESSLRPPEGQTGCTVEGTLFTGKVAGEFRINLGEDVPLQLAPMVAVEFKTNYTAHKIHHFSVGERKENKIYPLDGL-ETIPDGEGHYLYNLRIIPTVEQPLYGSPEHNFEFAFQESLHKGTRLSPGMTALTLSAPGIHFFYEFYPVMVEYTHQRTPFLQFVTQALAVVGGIFTMSNILDSILYQ-SARVM 301 R D KG + +Q +T G ++T+ S + LL +SEL ++ E+VN M VD T P + + I ITF KC D++ DA +G+ + L+ ++ P ES GC + GT+ KVAG ++ L + +F ++H +H S G N + PL+ + +T+ Y Y L I+PT PLYG P ++++ E + + LS PG+ F YEF P+ VEY + FLQFVT A+VGG+F ++ I+DS++Y S+R M Sbjct: 6 RQYDVYTKGVDGIQEKTMGGAIITVISVAIVILLFLSELGLYTTTEVVNRMHVD-TVPQ-DAVMRIEVDITFLHEKCADVAMDASDIKGNKDL-LSDSNIAAVPVVSDESE--------GCRLTGTVDVHKVAG--VVSFAHAGSLNMFSFS--DFLEFNSSHVVHRLSFGPEIPNMVNPLENVHKTVEKNVALYKYGLSIVPTQHTPLYGPPVQTYQYSVTEYTSEPSEEG------ALSFPGVSFMYEFSPIKVEYVESKPSFLQFVTSTSAIVGGVFAVARIVDSLIYSVSSRKM 282
BLAST of EWM27929.1 vs. NCBI_GenBank
Match: gi|698809854|ref|XP_009837956.1| (hypothetical protein H257_12449 [Aphanomyces astaci] >gi|574107214|gb|ETV72728.1| hypothetical protein H257_12449 [Aphanomyces astaci]) HSP 1 Score: 140.584 bits (353), Expect = 5.801e-36 Identity = 97/316 (30.70%), Postives = 149/316 (47.15%), Query Frame = 0 Query: 6 RALDFNVKGSESVQVRTAMGGLVTMASAGLCFLLLVSELLSFSRVEIVNHMTVDSTAPSLETTIPINFHITFPLVKCKDISFDAESTRGDAVVYLASQDVRKTPATGVESSLRPPEGQTGCTVEGTLFTGKVAGEFRINLGEDVPLQLAPMVAVEFKTNYTAHKIHHFSVGERKENKIYPLDGLETIPDGEGHYL-------------------YNLRIIPTVEQPLYGSPEHNFEFAFQESLHKGTRLSPGMTALTLSAPGIHFFYEFYPVMVEYTHQRTPFLQFVTQALAVVGGIFTMSNILDSILYQ-SARVM 301 R D KG + +Q +T G ++T+ S + LL +SEL ++ E+VN M VD T P + + I ITF KC D++ DA +G+ + L+ ++ P ES GC + GT+ KVAG ++ L + +F ++H +H S G N + PL+ + + G YL Y L I+PT PLYG P ++++ E + + LS PG+ F YEF P+ VEY + FLQFVT A+VGG+F ++ I+DS++Y S+R M Sbjct: 6 RQYDVYTKGVDGIQEKTMGGAIITVISVAIVILLFLSELGLYTTTEVVNRMHVD-TVPQ-DAVMRIEVDITFLHEKCADVAMDASDIKGNKDL-LSDSNIAAVPVVSDESE--------GCRLTGTVDVHKVAG--VVSFAHAGSLNMFSFS--DFLEFNSSHVVHRLSFGPEIPNMVNPLENVHKTVEKNGRYLPSYLSFIIRHLVIVVALYKYGLSIVPTQHTPLYGPPVQTYQYSVTEYTSEPSEEG------ALSFPGVSFMYEFSPIKVEYVESKPSFLQFVTSTSAIVGGVFAVARIVDSLIYSVSSRKM 300
BLAST of EWM27929.1 vs. NCBI_GenBank
Match: gi|1173944156|gb|OQR92923.1| (endoplasmic reticulum-Golgi intermediate compartment protein [Achlya hypogyna]) HSP 1 Score: 134.806 bits (338), Expect = 5.527e-34 Identity = 93/294 (31.63%), Postives = 143/294 (48.64%), Query Frame = 0 Query: 6 RALDFNVKGSESVQVRTAMGGLVTMASAGLCFLLLVSELLSFSRVEIVNHMTVDSTAPSLETTIPINFHITFPLVKCKDISFDAESTRGDAVVYLASQDVRKTPATGVESSLRPPEGQTGCTVEGTLFTGKVAGEFRINLGEDVPLQLAPMVAVEFKTNYTAHKIHHFSVGERKENKIYPLDGL-ETIPDGEGHYLYNLRIIPTVEQPLYGSPEHNFEFAFQESLHKGTRLSPGMTALTLSAPGIHFFYEFYPVMVEYTHQRTPFLQFVTQALAVVGGIFTMSNILDSILYQSA 298 R D KG E +Q RT G ++T+ S + FLLL+SEL ++ E+VN M VD +T + + ITF C D++ DA T+G+ V + S DV P + GC G + K AG+ IN + L + +EF ++H +H G N + PL+ + + + + Y Y + I+PT PLYG H ++++ E H G S PG+ F YEF P+ VEY + FLQF+T A+VGG+F ++ I+D +++ A Sbjct: 6 RQYDVYTKGVEGIQERTTGGAIITLVSMVIVFLLLLSELGIYTTTEVVNRMYVD--IDPQDTVMHVEVDITFLHEPCSDVAMDASDTKGNRDVIVKS-DVIAYPM---------EDSNEGCRFTGYVDVQKTAGD--INFAHEGALNM--FTFLEFLDFNSSHIVHSLRFGPTVPNMVNPLENVHKAVIENFKIYKYGISIVPTQYTPLYGPSVHTYQYSVTE--HASEPNENG----RFSFPGVVFSYEFSPIKVEYIETKPSFLQFLTSTCAIVGGVFAVARIVDGLVHSVA 277
BLAST of EWM27929.1 vs. NCBI_GenBank
Match: gi|1173960674|gb|OQS06780.1| (endoplasmic reticulum-Golgi intermediate compartment protein [Thraustotheca clavata]) HSP 1 Score: 117.857 bits (294), Expect = 1.165e-27 Identity = 92/291 (31.62%), Postives = 142/291 (48.80%), Query Frame = 0 Query: 6 RALDFNVKGSESVQVRTAMGGLVTMASAGLCFLLLVSELLSFSRVEIVNHMTVDSTAPSLETTIPINFHITFPLVKCKDISFDAESTRGDAVVYLASQDVRKTPATGVESSLRPPEGQTGCTVEGTLFTGKVAGEFRINLGEDVPLQLAPMVAVEFKTNYTAHKIHHFSVGERKENKIYPLDGL-ETIPDGEGHYLYNLRIIPTVEQPLYGSPEHNFEFAFQESLHKGTRLSPGMTALTLSAPGIHFFYEFYPVMVEYTHQRTPFLQFVTQALAVVGGIFTMSNILDSILY 295 R D KG E +Q RT G ++T+ S + LL +SEL ++ E+ N M VD +T + + ITF C D++ DA T+G+ V + S DV P + + GC +G + K+AG+ IN + L + +EF ++H +H G N + PL+ + + + + Y Y + I+PT PLYGSP ++++ E H G S PG+ F YEF P+ VEY + FLQF+T A+VGG+F ++ ILD +Y Sbjct: 6 RQYDVYTKGVEGIQERTTGGAIITLTSLVVVLLLFLSELGIYTTTEVANRMYVD--VDPQDTVMHVEVDITFLHEPCSDVAMDASDTKGNREVIVQS-DVVAYPLE---------DEKEGCRFKGFVDLKKIAGD--INFAHEGSLNM--FTFLEFLDFNSSHIVHSLRFGPSIPNMVNPLENVHKVVIENFKLYKYRISIVPTQYTPLYGSPVQTYQYSVTE--HASDPNENGR----FSFPGVAFSYEFSPIKVEYIETKPSFLQFLTSTCAIVGGVFAVARILDGFVY 274
BLAST of EWM27929.1 vs. NCBI_GenBank
Match: gi|313220803|emb|CBY31643.1| (unnamed protein product [Oikopleura dioica]) HSP 1 Score: 117.472 bits (293), Expect = 2.228e-27 Identity = 84/306 (27.45%), Postives = 140/306 (45.75%), Query Frame = 0 Query: 6 RALDFNVKGSESVQVRTAMGGLVTMASAGLCFLLLVSELLSFSRVEIVNHMTVDSTAPSLETTIPINFHITFPLVKCKDISFDAESTRG-DAVVYLASQDVRKTPATGVESSLRPPEGQTGCTVEGTLFTGKVAGEFRINLGEDVPLQLAPMVAVEFKTNYTAHKIHHFSVGERKEN-------KIYPLDGLETIPDGEGHYLYNLRIIPTVEQPLYGSPEHNFEFAFQESLHKGTRLSPGMTALTLSAPGIHFFYEFYPVMVEYTHQRTPFLQFVTQALAVVGGIFTMSNILDSILYQSARVMKK 303 R D K + + T G +++++S LLVSE L+F R +IV+ + VD P++ IP+N ++ P ++CK + D + G V YL ++ RK P G + GC GT KV G F ++ Q+ P + H+IH S GE + PL+G +T + + Y L+++PTV Q + F + F G + P I F YE P+ V+YT + P F+T A++GG FT++ ++DS+++ + +++KK Sbjct: 6 RRFDIYRKVPKDLTQPTTAGAVISISSGLFILFLLVSEFLTFMRTDIVSELYVDD--PTVGDKIPVNIRMSLPGIECKFLGIDIQDEHGRHEVGYL--ENTRKDPINGGK----------GCIFGGTFHVNKVPGNFHVSTHSS---QVQP------QNPDMNHEIHELSFGESMKGINSNLPANFIPLNGKKTGAEKMASHDYTLKVVPTVYQDI--KKRTKFGYQFTAVYKDFVAFGHGHRVM----PAIWFRYEVSPITVKYTEKSKPLYHFLTTFCAIIGGTFTVAGMIDSMIFSAHQMVKK 282
BLAST of EWM27929.1 vs. NCBI_GenBank
Match: gi|313230728|emb|CBY08126.1| (unnamed protein product [Oikopleura dioica]) HSP 1 Score: 117.472 bits (293), Expect = 2.323e-27 Identity = 84/306 (27.45%), Postives = 140/306 (45.75%), Query Frame = 0 Query: 6 RALDFNVKGSESVQVRTAMGGLVTMASAGLCFLLLVSELLSFSRVEIVNHMTVDSTAPSLETTIPINFHITFPLVKCKDISFDAESTRG-DAVVYLASQDVRKTPATGVESSLRPPEGQTGCTVEGTLFTGKVAGEFRINLGEDVPLQLAPMVAVEFKTNYTAHKIHHFSVGERKEN-------KIYPLDGLETIPDGEGHYLYNLRIIPTVEQPLYGSPEHNFEFAFQESLHKGTRLSPGMTALTLSAPGIHFFYEFYPVMVEYTHQRTPFLQFVTQALAVVGGIFTMSNILDSILYQSARVMKK 303 R D K + + T G +++++S LLVSE L+F R +IV+ + VD P++ IP+N ++ P ++CK + D + G V YL ++ RK P G + GC GT KV G F ++ Q+ P + H+IH S GE + PL+G +T + + Y L+++PTV Q + F + F G + P I F YE P+ V+YT + P F+T A++GG FT++ ++DS+++ + +++KK Sbjct: 6 RRFDIYRKVPKDLTQPTTTGAVISISSGLFILFLLVSEFLTFMRTDIVSELYVDD--PTVGDKIPVNIRMSLPGIECKFLGIDIQDEHGRHEVGYL--ENTRKDPINGGK----------GCIFGGTFHVNKVPGNFHVSTHSS---QVQP------QNPDMNHEIHELSFGESMKGINSNLPANFIPLNGKKTGAEKMASHDYTLKVVPTVYQDI--KKRTKFGYQFTAVYKDFVAFGHGHRVM----PAIWFRYEVSPITVKYTEKSKPLYHFLTTFCAIIGGTFTVAGMIDSMIFSAHQMVKK 282
BLAST of EWM27929.1 vs. NCBI_GenBank
Match: gi|675210571|ref|XP_008914170.1| (hypothetical protein PPTG_17953 [Phytophthora parasitica INRA-310] >gi|568085595|gb|ETN00499.1| hypothetical protein PPTG_17953 [Phytophthora parasitica INRA-310]) HSP 1 Score: 114.39 bits (285), Expect = 2.513e-26 Identity = 81/295 (27.46%), Postives = 142/295 (48.14%), Query Frame = 0 Query: 6 RALDFNVKGSESVQVRTAMGGLVTMASAGLCFLLLVSELLSFSRVEIVNHMTVDSTAPSLETTIPINFHITFPLVKCKDISFDAESTRGDAVVYLASQDVRKTPATGVESSLRPPEGQTGCTVEGTLFTGKVAGEFRINLGEDVPLQLAPMVAVEFKTNYTAHKIHHFSVGERKENKIYPL-DGLETIPDGEGHYLYNLRIIPTVEQPLYGSPEHNFEFAFQESLHKGTRLSPGMTALTLSAPGIHFFYEFYPVMVEYTHQRTPFLQFVTQALAVVGGIFTMSNILDSILYQSAR 299 R D NVKG E +Q RT GG+VT+ S + LL+SE + V + + M VD+ I ++ ++F CK+++ D ++G + L +D+++ P G+ GC + GT+ KVAG+ ++ + L + +F ++H ++H G + + PL D + I Y Y + I+P+ L G F+++ E H+ + P +S PG+ F YEF P+ VEY + L F+T A+VGG+F ++ ++D +Y ++ Sbjct: 4 RRFDLNVKGVEGIQERTIGGGVVTLVSCIVVAFLLLSEFSVWWTVSVTHRMHVDTDPQDFPINIEVD--VSFLHEACKEVAMDVSDSKGHKEIML-KKDIQEEPF-----------GENGCRLHGTVQVQKVAGD--LSFAHEGSLTVFSFF--DFLNFNSSHVVNHLRFGPQIPDMETPLIDVSKIITKNLATYKYFVSIVPSRYVYLNGRSVTTFQYSVTE--HETSSRGPNGQ---VSFPGVIFSYEFSPIAVEYIESKPSVLHFLTSTSAIVGGVFAVARMIDGAIYSVSK 275
BLAST of EWM27929.1 vs. NCBI_GenBank
Match: gi|566010317|gb|ETI33228.1| (hypothetical protein F443_20088 [Phytophthora parasitica P1569] >gi|567947752|gb|ETK73525.1| hypothetical protein L915_19550 [Phytophthora parasitica] >gi|567976434|gb|ETL26957.1| hypothetical protein L916_19438 [Phytophthora parasitica] >gi|568005923|gb|ETL80200.1| hypothetical protein L917_19281 [Phytophthora parasitica] >gi|568035828|gb|ETM33455.1| hypothetical protein L914_19317 [Phytophthora parasitica] >gi|570313984|gb|ETO61932.1| hypothetical protein F444_20100 [Phytophthora parasitica P1976] >gi|570937764|gb|ETP03021.1| hypothetical protein F441_19965 [Phytophthora parasitica CJ01A1] >gi|570968079|gb|ETP31198.1| hypothetical protein F442_19912 [Phytophthora parasitica P10297] >gi|970630755|gb|KUF77601.1| Endoplasmic reticulum-Golgi intermediate compartment protein 1 [Phytophthora nicotianae]) HSP 1 Score: 113.235 bits (282), Expect = 6.209e-26 Identity = 80/295 (27.12%), Postives = 142/295 (48.14%), Query Frame = 0 Query: 6 RALDFNVKGSESVQVRTAMGGLVTMASAGLCFLLLVSELLSFSRVEIVNHMTVDSTAPSLETTIPINFHITFPLVKCKDISFDAESTRGDAVVYLASQDVRKTPATGVESSLRPPEGQTGCTVEGTLFTGKVAGEFRINLGEDVPLQLAPMVAVEFKTNYTAHKIHHFSVGERKENKIYPL-DGLETIPDGEGHYLYNLRIIPTVEQPLYGSPEHNFEFAFQESLHKGTRLSPGMTALTLSAPGIHFFYEFYPVMVEYTHQRTPFLQFVTQALAVVGGIFTMSNILDSILYQSAR 299 R D NVKG E +Q RT GG+VT+ S + LL+SE + V + + M VD+ I ++ ++F CK+++ D ++G + L +D+++ P G+ GC + GT+ KVAG+ ++ + L + +F ++H ++H G + + PL D + + Y Y + I+P+ L G F+++ E H+ + P +S PG+ F YEF P+ VEY + L F+T A+VGG+F ++ ++D +Y ++ Sbjct: 4 RRFDLNVKGVEGIQERTIGGGVVTLVSCIVVAFLLLSEFSVWWTVSVTHRMHVDTDPQDFPINIEVD--VSFLHEACKEVAMDVSDSKGHKEIML-KKDIQEEPF-----------GENGCRLHGTVQVQKVAGD--LSFAHEGSLTVFSFF--DFLNFNSSHVVNHLRFGPQIPDMETPLIDVSKILTKNLATYKYFVSIVPSRYVYLNGRSVTTFQYSVTE--HETSSRGPNGQ---VSFPGVIFSYEFSPIAVEYIESKPSVLHFLTSTSAIVGGVFAVARMIDGAIYSVSK 275 The following BLAST results are available for this feature:
BLAST of EWM27929.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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