EWM28016.1, cds2662 (CDS) Nannochloropsis gaditana

Overview
NameEWM28016.1
Unique Namecds2662
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002459.1:925478..926821 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM28016.1
Producteukaryotic translation initiation factor 5
Orig transcript idgnl|cribi|Naga_100008g39.7908.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:925478..926821 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0008135translation factor activity, RNA binding
GO:0005488binding
GO:0003743translation initiation factor activity
GO:0005515protein binding
Vocabulary: Biological Process
TermDefinition
GO:0006413translational initiation
Vocabulary: INTERPRO
TermDefinition
IPR016024ARM-type_fold
IPR016190Transl_init_fac_IF2/IF5_Zn-bd
IPR016189Transl_init_fac_IF2/IF5_N
IPR016021MIF4-like_typ_1/2/3
IPR002735Transl_init_fac_IF2/IF5
IPR003307W2_domain
Homology
BLAST of EWM28016.1 vs. NCBI_GenBank
Match: gi|585110357|gb|EWM28016.1| (eukaryotic translation initiation factor 5 [Nannochloropsis gaditana])

HSP 1 Score: 911.753 bits (2355), Expect = 0.000e+0
Identity = 447/447 (100.00%), Postives = 447/447 (100.00%), Query Frame = 0
Query:    1 MMNIAGLNPVEDANYRYKMPRILAKVEGRGNGIKTVVINMKEVAQALHRMPAEVTKFFGTELGAQTTYREETERAVVNGAHTAPALQTSLCRYIQGFVLCPSCGLPETAYKIKGGVIYQKCDACGEKSMCDMSHKLTTFIINTHKKAAKEGKGTKEAKEKKKKDRSKADAEDDDLDEDGGAEGEEKEKKKKKKKDKEEKEKKKKKKREKREKASEAGSSDGDGNGMGTSNGKTSKQGSSDDDEGEGEEEEEEEEGEVVARLDNLAVEDATALAGAIGRLQHFLNSNPSAGASQILEEIRMIATFSALPVEERPFLFVQAAFGPEAGRENAIRRHQKVLKGLMLSVDEEMYQRRLIGVMEHLCAVTHAESLHKWFPVLLKQLYDEGVVDEEVFLEWAEEEGPTEFTRREVTPAMVESLRKEAGKFVTWLTEAASDSEEESGGEESEEE 447
            MMNIAGLNPVEDANYRYKMPRILAKVEGRGNGIKTVVINMKEVAQALHRMPAEVTKFFGTELGAQTTYREETERAVVNGAHTAPALQTSLCRYIQGFVLCPSCGLPETAYKIKGGVIYQKCDACGEKSMCDMSHKLTTFIINTHKKAAKEGKGTKEAKEKKKKDRSKADAEDDDLDEDGGAEGEEKEKKKKKKKDKEEKEKKKKKKREKREKASEAGSSDGDGNGMGTSNGKTSKQGSSDDDEGEGEEEEEEEEGEVVARLDNLAVEDATALAGAIGRLQHFLNSNPSAGASQILEEIRMIATFSALPVEERPFLFVQAAFGPEAGRENAIRRHQKVLKGLMLSVDEEMYQRRLIGVMEHLCAVTHAESLHKWFPVLLKQLYDEGVVDEEVFLEWAEEEGPTEFTRREVTPAMVESLRKEAGKFVTWLTEAASDSEEESGGEESEEE
Sbjct:    1 MMNIAGLNPVEDANYRYKMPRILAKVEGRGNGIKTVVINMKEVAQALHRMPAEVTKFFGTELGAQTTYREETERAVVNGAHTAPALQTSLCRYIQGFVLCPSCGLPETAYKIKGGVIYQKCDACGEKSMCDMSHKLTTFIINTHKKAAKEGKGTKEAKEKKKKDRSKADAEDDDLDEDGGAEGEEKEKKKKKKKDKEEKEKKKKKKREKREKASEAGSSDGDGNGMGTSNGKTSKQGSSDDDEGEGEEEEEEEEGEVVARLDNLAVEDATALAGAIGRLQHFLNSNPSAGASQILEEIRMIATFSALPVEERPFLFVQAAFGPEAGRENAIRRHQKVLKGLMLSVDEEMYQRRLIGVMEHLCAVTHAESLHKWFPVLLKQLYDEGVVDEEVFLEWAEEEGPTEFTRREVTPAMVESLRKEAGKFVTWLTEAASDSEEESGGEESEEE 447          
BLAST of EWM28016.1 vs. NCBI_GenBank
Match: gi|695414224|ref|XP_009526246.1| (hypothetical protein PHYSODRAFT_559899 [Phytophthora sojae] >gi|348677371|gb|EGZ17188.1| hypothetical protein PHYSODRAFT_559899 [Phytophthora sojae])

HSP 1 Score: 287.345 bits (734), Expect = 4.137e-89
Identity = 188/442 (42.53%), Postives = 256/442 (57.92%), Query Frame = 0
Query:    1 MMNIAGLNPVEDANYRYKMPRILAKVEGRGNGIKTVVINMKEVAQALHRMPAEVTKFFGTELGAQTTYREETERAVVNGAHTAPALQTSLCRYIQGFVLCPSCGLPETAYKIKGGVIYQKCDACGEKSMCDMSHKLTTFIINTHKKAAKEGKGTKEAKEKKKKDRSKADAEDDDLDEDGGAEGEEKEKKKKKKKDKEEKEKKKKKKREKREKASEAGSSD---GDG--------NGMGTSNGKTSKQGSSDDDEGEGEEEEEEEEGEVVARLDNLAVEDATALAGAIGRLQHFLNSNPSAGASQILEEIRMIATFSALPVEERPFLFVQAAFGPEAGRENAIRRHQKVLKGLMLSVDEEMYQRRLIGVMEHLCAVTHAESLHKWFPVLLKQLYDEGVVDEEVFLEWAEEEGPTEFTRREVTPAMVESLRKEAGKFVTWLTEA 431
             MNIAG  PV+D  YRYKMPR+ AK+EGRGNGIKT+V+N  ++A +LHR  AEV KFFG ELGAQ+ Y E+T+RA+VNGA  A  +Q  L +YI+GFVLCP C LPET YK KG +I+ KC ACG     DM+HKLTTFI   H  AAK G   ++ K+ KK+ + K D +  D  ED  A  E+KEKK+KK K +++ +K KK K++K++K  +  +SD   GD           +           +   +       E     EVVA LDNL V+D  AL  A+  LQ FL    S   S+I EE+    T+SALPV +R  +F ++AF  E    N + +   VL+ +   +D +  Q +L+ + EH CAV H+E L   +P+LLK LYDE +++EE  + WA      E+    VT  +   L+     F+ WL  A
Sbjct:    3 FMNIAGTQPVDDPEYRYKMPRLQAKIEGRGNGIKTLVVNCADIATSLHRSTAEVCKFFGCELGAQSKYDEKTDRAIVNGAFEAGMMQQHLSKYIEGFVLCPGCRLPETKYKFKGQLIFHKCYACGAVEPVDMNHKLTTFIFKEH-TAAKRGSKDEKKKKDKKEKKEKKDKKSHDEPEDESATKEKKEKKEKKDKKEKKDKKDKKDKKDKKKKHHKEKNSDKESGDDEDDEVVWHTDLSAEAVAARAAEAEAIEAAAAAAMEASAAEEVVATLDNLQVDDENALDSAVANLQRFLKE--SHSESEIFEELCRQQTYSALPVTDRLVIFFRSAFTKEVLSSNQVAKFAPVLEKI---IDAQHAQYQLLALTEHFCAVEHSELLTS-YPILLKLLYDEDLLEEECLVAWANNGVRKEYAHWAVTDELAAKLKTLLQPFIEWLENA 437          
BLAST of EWM28016.1 vs. NCBI_GenBank
Match: gi|301120402|ref|XP_002907928.1| (eukaryotic translation initiation factor 5, putative [Phytophthora infestans T30-4] >gi|262102959|gb|EEY61011.1| eukaryotic translation initiation factor 5, putative [Phytophthora infestans T30-4])

HSP 1 Score: 284.648 bits (727), Expect = 4.352e-88
Identity = 181/435 (41.61%), Postives = 250/435 (57.47%), Query Frame = 0
Query:    1 MMNIAGLNPVEDANYRYKMPRILAKVEGRGNGIKTVVINMKEVAQALHRMPAEVTKFFGTELGAQTTYREETERAVVNGAHTAPALQTSLCRYIQGFVLCPSCGLPETAYKIKGGVIYQKCDACGEKSMCDMSHKLTTFIINTHKKAAKEGKGTKEAKEKKKKDRSKADAEDDDLDEDGGAEGEEKEKKKKKKKDKEEKEKKKKKKREKREKASEAGSSDGD----GNGMGTSNGKTSKQGSSDDDEGEGEEEEEEEEGEVVARLDNLAVEDATALAGAIGRLQHFLNSNPSAGASQILEEIRMIATFSALPVEERPFLFVQAAFGPEAGRENAIRRHQKVLKGLMLSVDEEMYQRRLIGVMEHLCAVTHAESLHKWFPVLLKQLYDEGVVDEEVFLEWAEEEGPTEFTRREVTPAMVESLRKEAGKFVTWLTEA 431
            +MNIAG   V+D  YRYKMPR+ AK+EGRGNGIKT+V+N  ++A +LHR  AEV KFFG ELGAQ+ Y E+T+RA+VNGA  A  +Q  L +YI+GFVLCP C LPET YK KG +I+ KC ACG     DM+HKLTTFI   H  A +  K  K+ KEKK+K   K      D  ED  A  ++++K+KK KKDK++K+ KKKK  + +    +A  ++ D       +           +   +       +     EVVA LDNL V+D  AL  A+  LQ FL    S   S+I EE+    T+SALPV +R  +F ++AF  +    N + ++  VL+ +   +D +  Q +L+ + EH CAV H E L   +P+LLK LYDE +++EE  + WA      E+    VT  +   L+     F+ WL  A
Sbjct:    3 LMNIAGTQSVDDPEYRYKMPRLQAKIEGRGNGIKTLVVNCADIATSLHRSTAEVCKFFGCELGAQSKYDEKTDRAIVNGAFEAGMMQQHLIKYIEGFVLCPGCRLPETKYKFKGQLIFHKCYACGAVEPVDMNHKLTTFIFKEHTAAKRSSKDDKKKKEKKEKKEKKDKKASHDEPEDESATKKKEKKEKKDKKDKKDKKDKKKKHHKDKHSDKDASDAEDDEVVWHTDLSAEAVAARAAEAEAIEAAAAAAMQSAAAEEVVATLDNLQVDDENALDSAVSNLQRFLTE--SHAESEIFEELCRQQTYSALPVTDRLVIFFRSAFTNQVLASNQVAKYAPVLEKI---IDGQHSQYQLLALAEHFCAVEHPELLSS-YPILLKLLYDEDLLEEECLVAWANNGVRKEYAHWAVTDELAAKLKALLQPFIEWLENA 431          
BLAST of EWM28016.1 vs. NCBI_GenBank
Match: gi|953487457|emb|CEG48285.1| (eukaryotic translation initiation factor 5 [Plasmopara halstedii])

HSP 1 Score: 273.092 bits (697), Expect = 1.293e-83
Identity = 179/429 (41.72%), Postives = 253/429 (58.97%), Query Frame = 0
Query:    1 MMNIAGLNPVEDANYRYKMPRILAKVEGRGNGIKTVVINMKEVAQALHRMPAEVTKFFGTELGAQTTYREETERAVVNGAHTAPALQTSLCRYIQGFVLCPSCGLPETAYKIKGGVIYQKCDACGEKSMCDMSHKLTTFIINTHKKAAKEGKGTKEAKEKKKKDRSKADAEDDDLDEDGGAEGEEKEKKKKKKKDKEEKEKKKKKKREKREKASEAGSSDGD----GNGMGTSNGKTSKQGSSDDDEGEGEEEEEEEEGEVVARLDNLAVEDATALAGAIGRLQHFLNSNPSAGASQILEEIRMIATFSALPVEERPFLFVQAAFGPEAGRENAIRRHQKVLKGLMLSVDEEMYQRRLIGVMEHLCAVTHAESLHKWFPVLLKQLYDEGVVDEEVFLEWAEEEGPTEFTRREVTPAMVESLRKEAGKFV 425
            MMNIAG   V+D  YRYKMPR+ AK+EGRGNGIKT+V+N  ++A +LHR  AEV KFFG ELGAQ+ Y E+T+RA+VNGA  A  +Q  L +YI+GFVLCP C LPET YK KG +I+ KC ACG     DM+HKLTTFI   H  A +  K  K  K+KKK+ + K  + ++  DE    E ++++K+KK KK+K +K+KKKK  +EK      +GS D D       +           +   +       E     EVVA LDNL V+D  AL   I  L+ FL+ N S   S+I +E+    T+SALPV +R  +F ++AF  +   +N   ++  VL+ +   +D +  Q +L+ ++EH CAV H + L+  +P+LLK LYDE +++E+  + WA      E+   EVT  +   L+     F+
Sbjct:    3 MMNIAGTQSVDDPEYRYKMPRLQAKIEGRGNGIKTLVVNCADIATSLHRSTAEVCKFFGCELGAQSKYDEKTDRAIVNGAFEAGQMQQHLSKYIEGFVLCPGCRLPETKYKFKGQLIFHKCYACGAVEPVDMNHKLTTFIFKEHTAAKRSSKDGKTKKDKKKEKKEKKVSRNEPEDESATKEKKKEKKEKKDKKEKHQKDKKKKHHKEKSSDKGASGSDDEDEVVWHTDLSAEAVAARAAEAESIEAAATAAMEAVAAEEVVATLDNLHVDDENALDSTISNLKRFLSENHS--TSEIFDELCRQQTYSALPVTDRLVIFFRSAFTDQMLVDNQAVKYAPVLEKI---IDGQHSQYQLLALVEHFCAVKHPKLLNS-YPILLKILYDEDLLEEDCLVSWATNGVRKEYAHWEVTDELAAKLKNLLQPFI 425          
BLAST of EWM28016.1 vs. NCBI_GenBank
Match: gi|325192765|emb|CCA27172.1| (eukaryotic translation initiation factor 5 putative [Albugo laibachii Nc14])

HSP 1 Score: 270.781 bits (691), Expect = 5.367e-83
Identity = 174/443 (39.28%), Postives = 249/443 (56.21%), Query Frame = 0
Query:    2 MNIAGLNPVEDANYRYKMPRILAKVEGRGNGIKTVVINMKEVAQALHRMPAEVTKFFGTELGAQTTYREETERAVVNGAHTAPALQTSLCRYIQGFVLCPSCGLPETAYKIKGGVIYQKCDACGEKSMCDMSHKLTTFIINTHKKAAKEGKGTKEAKEKKKKDRSKADAED-DDLDEDGGAEGEEKEKKKKKKKDKEEKEKKKKKKREKREKASEAGSSDGDGNGMGTSNGKTSKQGSSDDDEGEGEEEEEEEEGEVVARLDNLAVEDATALAGAIGRLQHFLNSNPSAGASQILEEIRMIATFSALPVEERPFLFVQAAFGPEAGRENAIRRHQKVLKGLMLSVDEEMYQRRLIGVMEHLCAVTHAESLHKWFPVLLKQLYDEGVVDEEVFLEWAEEEGPTEFTRREVTPAMVESLRKEAGKFVTWLTEAASDSEEESGGEE 443
            MNIAG  PV+D  YRYKMPR++ K+EGRGNGIKT+V+N  +VA +LHR  AEV KFFGTELGAQ+ Y E+T+RA+VNGA     +QT L +YI+GFVLCP C LPE+ YK KG  I+ KC ACG     DM+HKLTTFI+  H  A + GK T +  +KKKK   K    D  + D +   +  + +K +K KK K+  ++K  ++ E     S    +           G  +   +     GEGE         +VA LD+L V D  AL  AI +L  F+ S P+  A  I +E+  + T++AL + +R  +  +A+F  +   +N + +   +L  L+ S  +   Q RLI + EH+CA+ + E + + FPVLLK LYDE ++DEE    W + +   ++    V+      L++    F  WL  A    EEE+  +E
Sbjct:    4 MNIAGTQPVDDPEYRYKMPRLITKIEGRGNGIKTLVVNCHDVATSLHRSTAEVCKFFGTELGAQSKYDEKTDRAIVNGAFEVGMMQTHLSKYIEGFVLCPGCRLPESKYKFKGQSIFHKCYACGAVEPVDMNHKLTTFIMKEHTAAKRAGKKTDKDDKKKKKKDRKEKFADGPEKDGNSSPKENKDKKDRKDKKKKKNGKEKSTEEVEWHTDLSPEAVAARAAEAEAIEAGARAAMVNGSHTNGEGE---------IVATLDHLQVHDEDALELAITKLSMFMESEPTTDA--IHDELCRLQTYAALSISDRLVIVFRASFDDQFVAKNQVSKSVSILGKLVTSQHD---QYRLIALCEHMCAMKYPEIISQ-FPVLLKLLYDEDLIDEECLFGWLKTDIRKQYADPIVSDDSNAKLKQHLQVFTDWLENA----EEETDDDE 427          
BLAST of EWM28016.1 vs. NCBI_GenBank
Match: gi|673035262|ref|XP_008871592.1| (hypothetical protein H310_07857 [Aphanomyces invadans] >gi|574472812|gb|ETV99816.1| hypothetical protein H310_07857 [Aphanomyces invadans])

HSP 1 Score: 269.626 bits (688), Expect = 2.582e-82
Identity = 177/460 (38.48%), Postives = 256/460 (55.65%), Query Frame = 0
Query:    2 MNIAGLNPVEDANYRYKMPRILAKVEGRGNGIKTVVINMKEVAQALHRMPAEVTKFFGTELGAQTTYREETERAVVNGAHTAPALQTSLCRYIQGFVLCPSCGLPETAYKIKGG-VIYQKCDACGEKSMCDMSHKLTTFIINTHKKAAKEGKGTKEAKEKKKKDRSKADAEDDDLDEDGGAEGEEKEKKKKKKKDKEEKEKKKKKKREKREKASEA-GSSDGDGNGMGTSNGKTSKQGSSD----------------DDEGEGEEEEEEEEGEVVARLDNLAVEDATALAGAIGRLQHFLNSNPSAGASQILEEIRMIATFSALPVEERPFLFVQAAFGPEAGRENAIRRHQKVLKGLMLSVDEEMYQRRLIGVMEHLCAVTHAESLHKWFPVLLKQLYDEGVVDEEVFLEWAEEEGPTEFTRREVTPAMVESLRKEAGKFVTWLTEAASDSEEESGGEE 443
            +NIAG  PV+D  YRYKMPR++AK+EGRGNGIKTVV+N  E+A ALHR P EVTKFFGTELGAQ+ + + TERAVVNGA  A  +Q  L ++I+ FVLCP+C LPET YK KG   I+ KC ACG     DM+HKLTT+++  H            AK  KK +    D +     +   AEG+++ KK+KK+K +++++  +KK+++ ++KA E+   +D DG+    ++ +   +  +D                +              EVV   DNL ++D  A+  A   +  FL    S  + +I +E+    T  ALP  +R  +F  AAF  +    N + +++ VL+ L   VD +  Q ++I + EH CAV    +L K FPV+LK LYDE ++ E++ L W ++         EVTP     LRK    F+ WL  A    EEES G++
Sbjct:    4 INIAGTTPVDDPEYRYKMPRLIAKIEGRGNGIKTVVVNAVEIASALHRSPGEVTKFFGTELGAQSKFDDATERAVVNGAFEASQMQAQLSKFIELFVLCPNCRLPETKYKFKGKESIFHKCLACGAVEPVDMNHKLTTYLLKEHTA----------AKRAKKAEGGDKDGKTKKKSKKDSAEGDDEPKKEKKEKKEKKEKSGEKKEKKSKKKAVESEDENDNDGSNKAGNDSEEEIEWHTDLSAEAVAARAKEAEALEAAAHAAMVAPPTSDEVVPSFDNLDIDDEAAIEAATAAVATFLMGTHS--SIEIYDEVVRQQTNGALPANDRLSIFFGAAFTSQILSSNQVAKYRPVLEKL---VDSDRMQHQVIALTEHFCAVKFP-TLLKSFPVVLKLLYDEEILSEDIILSWTDDAVRKLHAHFEVTPTQAADLRKSLEPFIFWLQNA----EEESEGDD 443          
BLAST of EWM28016.1 vs. NCBI_GenBank
Match: gi|635361188|emb|CCI49785.1| (unnamed protein product [Albugo candida])

HSP 1 Score: 251.906 bits (642), Expect = 1.127e-75
Identity = 175/438 (39.95%), Postives = 252/438 (57.53%), Query Frame = 0
Query:    2 MNIAGLNPVEDANYRYKMPRILAKVEGRGNGIKTVVINMKEVAQALHRMPAEVTKFFGTELGAQTTYREETERAVVNGAHTAPALQTSLCRYIQGFVLCPSCGLPETAYKIKGGVIYQKCDACGEKSMCDMSHKLTTFIINTHKKAAKEGKGTKEAKEKKKKDRSKADAEDDDLDEDGGAEGEEKEKKKKKKKDKEEKEKKKKKKREKREKASEAGSSDGDGNGMGTSNGKTSKQGS-SDDDEGEGEEEEEEEEGEVVARLDNLAVEDATALAGAIGRLQHFLNSNPSAGASQILEEIRMIATFSALPVEERPFLFVQAAFGPEAGRENAIRRHQKVLKGLMLSVDEEMYQRRLIGVMEHLCAVTHAESLHKWFPVLLKQLYDEGVVDEEVFLEWAEEEGPTEFTRREVTPAMVESLRKEAGKFVTWLTEAASDSEEE 438
            MNIAG  PVED  YRYKMPR++ K+EGRGNGIKT+V+N  +VA +LHR  AEV KFFGTELGAQ+ Y ++T+RA+VNGA     +QT L +YI+ FVLCP C LPE+ YK KG  I+ KC ACG     DM+HKLTTFI+  H  AAK      +  +KKKK + + +   D  ++DG A      K KK KKDK++K+ +K+K  E+ E  ++                +   + +  + + G GE        E+VA LDNL V+D  AL  A  +L  F+   P+  A  I EE+  + T +AL V +R  +F +AAF  +   +N + +   +L+ L+ S  +   Q RLI + EH+CAV +   + + FPVLLK LYD+ ++DEE    W + E   ++    V+      L++    F  WL  A  +++++
Sbjct:    1 MNIAGTQPVEDPEYRYKMPRLITKIEGRGNGIKTLVVNCHDVATSLHRSTAEVCKFFGTELGAQSKYDDKTDRAIVNGAFEVGMMQTHLSKYIESFVLCPGCRLPESKYKFKGQTIFHKCYACGAVEPVDMNHKLTTFILKEH-TAAKRAGKKTDKDDKKKKKKERKEKTIDGPEKDGNA----SPKNKKDKKDKKKKKSEKEKSAEEVEWHTDLSPEAVAARAAEAEAIEAGARAAMVNGNHGNGE-------NELVATLDNLQVDDEDALELATTKLSMFMEPEPTTDA--IYEELCRLQTNAALSVSDRLVIFFRAAFDDQFVAKNRVSKSVPILRKLVTSQHD---QYRLIALCEHMCAVQYPGIIFQ-FPVLLKLLYDDDLIDEECLFGWLKNEIRKQYADPIVSDNSYAKLKQHLQVFTDWLENAEEETDDD 420          
BLAST of EWM28016.1 vs. NCBI_GenBank
Match: gi|635361187|emb|CCI49784.1| (unnamed protein product [Albugo candida])

HSP 1 Score: 251.906 bits (642), Expect = 1.307e-75
Identity = 175/438 (39.95%), Postives = 252/438 (57.53%), Query Frame = 0
Query:    2 MNIAGLNPVEDANYRYKMPRILAKVEGRGNGIKTVVINMKEVAQALHRMPAEVTKFFGTELGAQTTYREETERAVVNGAHTAPALQTSLCRYIQGFVLCPSCGLPETAYKIKGGVIYQKCDACGEKSMCDMSHKLTTFIINTHKKAAKEGKGTKEAKEKKKKDRSKADAEDDDLDEDGGAEGEEKEKKKKKKKDKEEKEKKKKKKREKREKASEAGSSDGDGNGMGTSNGKTSKQGS-SDDDEGEGEEEEEEEEGEVVARLDNLAVEDATALAGAIGRLQHFLNSNPSAGASQILEEIRMIATFSALPVEERPFLFVQAAFGPEAGRENAIRRHQKVLKGLMLSVDEEMYQRRLIGVMEHLCAVTHAESLHKWFPVLLKQLYDEGVVDEEVFLEWAEEEGPTEFTRREVTPAMVESLRKEAGKFVTWLTEAASDSEEE 438
            MNIAG  PVED  YRYKMPR++ K+EGRGNGIKT+V+N  +VA +LHR  AEV KFFGTELGAQ+ Y ++T+RA+VNGA     +QT L +YI+ FVLCP C LPE+ YK KG  I+ KC ACG     DM+HKLTTFI+  H  AAK      +  +KKKK + + +   D  ++DG A      K KK KKDK++K+ +K+K  E+ E  ++                +   + +  + + G GE        E+VA LDNL V+D  AL  A  +L  F+   P+  A  I EE+  + T +AL V +R  +F +AAF  +   +N + +   +L+ L+ S  +   Q RLI + EH+CAV +   + + FPVLLK LYD+ ++DEE    W + E   ++    V+      L++    F  WL  A  +++++
Sbjct:    4 MNIAGTQPVEDPEYRYKMPRLITKIEGRGNGIKTLVVNCHDVATSLHRSTAEVCKFFGTELGAQSKYDDKTDRAIVNGAFEVGMMQTHLSKYIESFVLCPGCRLPESKYKFKGQTIFHKCYACGAVEPVDMNHKLTTFILKEH-TAAKRAGKKTDKDDKKKKKKERKEKTIDGPEKDGNA----SPKNKKDKKDKKKKKSEKEKSAEEVEWHTDLSPEAVAARAAEAEAIEAGARAAMVNGNHGNGE-------NELVATLDNLQVDDEDALELATTKLSMFMEPEPTTDA--IYEELCRLQTNAALSVSDRLVIFFRAAFDDQFVAKNRVSKSVPILRKLVTSQHD---QYRLIALCEHMCAVQYPGIIFQ-FPVLLKLLYDDDLIDEECLFGWLKNEIRKQYADPIVSDNSYAKLKQHLQVFTDWLENAEEETDDD 423          
BLAST of EWM28016.1 vs. NCBI_GenBank
Match: gi|397644022|gb|EJK76210.1| (hypothetical protein THAOC_02044 [Thalassiosira oceanica])

HSP 1 Score: 224.172 bits (570), Expect = 2.609e-65
Identity = 163/430 (37.91%), Postives = 229/430 (53.26%), Query Frame = 0
Query:    1 MMNIAGLNPVEDANYRYKMPRILAKVEGRGNGIKTVVINMKEVAQALHRMPAEVTKFFGTELGAQTTYREETERAVVNGAHTAPALQTSLCRYIQGFVLCPSCGLPETAYKIKGGVIYQKCDACGEKSMCDMSHKLTTFIINTHKKAAKEGKGTKEAKEKKKKDRSKADAEDDDLDEDGGAEGEEKEKKKKKKKDKEEKEKKKKKKREKREKASEAGSSDGDGNGMGTSNGKTSKQGSSDDDEGEGEEEEEEEEGEVVARLDNLAVEDATALAGAIGRLQHFLNSNPSAGASQILEEIRMIATFSALPVEERPFLFVQAAFGPEAGRENAIRRHQKVLKGLMLSVDEEMYQRRLIGVMEHLCAVTHAESLHKWFPVLLKQLYDEGVVDEEVFLEWAEEEGPTEFTRREVTPAMVESLRKEAGKFVTWLTE 430
            ++NI+G  PV+D  YRYKM  +  K EGRGNG KTV+ N+ +V  +LHR P+EV KFFG ELGAQTTY  ET RA+VNG HT   LQ  + +YI+ FVLC +C LPET YKIK G IYQKC ACG K M DMSHKL T+I+   KKA  + K   +  +KK K +  +                  +++ K KK +++ +K K KK+EK+ K  +    D D     +++G               E   E              ++DA A+A A+   + FL  N  A  S I E+I      S L  +++  +F++AAF P+  +   +  H + +    ++  + + +R LI   E LCA        K F VL+KQL+DE V++E+  LEWA  EG T++T   V      ++R EA   V WL E
Sbjct:    7 IVNISGTTPVDDPEYRYKMTLVFGKQEGRGNGSKTVIPNIVDVGSSLHRDPSEVNKFFGCELGAQTTYNAETHRAIVNGHHTDKVLQDLVHKYIETFVLCTNCRLPETEYKIKSGCIYQKCAACGAKEMVDMSHKLCTYILAQDKKAKADAKKKGKKDKKKDKKKDDS------------------DEENKDKKKEKKDKKSKDKKKEKKSKDKKKEKKDKDEADDASADG--------------AEPATEN-------------LDDANAMALAVEATKKFLEENTDATPSAIAEKITNEQMASGLKSQDKIHIFIRAAFTPDFFKHKQVETHAETIGK--ITQGKNVMERNLISACESLCA-----DKPKCFAVLIKQLFDEDVLEEDAILEWA-GEGRTDYTPDSVNEDQRCNMRAEAEPVVNWLME 383          
BLAST of EWM28016.1 vs. NCBI_GenBank
Match: gi|635361189|emb|CCI49786.1| (unnamed protein product [Albugo candida])

HSP 1 Score: 223.787 bits (569), Expect = 4.040e-65
Identity = 162/421 (38.48%), Postives = 239/421 (56.77%), Query Frame = 0
Query:   19 MPRILAKVEGRGNGIKTVVINMKEVAQALHRMPAEVTKFFGTELGAQTTYREETERAVVNGAHTAPALQTSLCRYIQGFVLCPSCGLPETAYKIKGGVIYQKCDACGEKSMCDMSHKLTTFIINTHKKAAKEGKGTKEAKEKKKKDRSKADAEDDDLDEDGGAEGEEKEKKKKKKKDKEEKEKKKKKKREKREKASEAGSSDGDGNGMGTSNGKTSKQGS-SDDDEGEGEEEEEEEEGEVVARLDNLAVEDATALAGAIGRLQHFLNSNPSAGASQILEEIRMIATFSALPVEERPFLFVQAAFGPEAGRENAIRRHQKVLKGLMLSVDEEMYQRRLIGVMEHLCAVTHAESLHKWFPVLLKQLYDEGVVDEEVFLEWAEEEGPTEFTRREVTPAMVESLRKEAGKFVTWLTEAASDSEEE 438
            MPR++ K+EGRGNGIKT+V+N  +VA +LHR  AEV KFFGTELGAQ+ Y ++T+RA+VNGA     +QT L +YI+ FVLCP C LPE+ YK KG  I+ KC ACG     DM+HKLTTFI+  H  AAK      +  +KKKK + + +   D  ++DG A      K KK KKDK++K+ +K+K  E+ E  ++                +   + +  + + G GE        E+VA LDNL V+D  AL  A  +L  F+   P+  A  I EE+  + T +AL V +R  +F +AAF  +   +N + +   +L+ L+ S  +   Q RLI + EH+CAV +   + + FPVLLK LYD+ ++DEE    W + E   ++    V+      L++    F  WL  A  +++++
Sbjct:    1 MPRLITKIEGRGNGIKTLVVNCHDVATSLHRSTAEVCKFFGTELGAQSKYDDKTDRAIVNGAFEVGMMQTHLSKYIESFVLCPGCRLPESKYKFKGQTIFHKCYACGAVEPVDMNHKLTTFILKEH-TAAKRAGKKTDKDDKKKKKKERKEKTIDGPEKDGNA----SPKNKKDKKDKKKKKSEKEKSAEEVEWHTDLSPEAVAARAAEAEAIEAGARAAMVNGNHGNGE-------NELVATLDNLQVDDEDALELATTKLSMFMEPEPTTDA--IYEELCRLQTNAALSVSDRLVIFFRAAFDDQFVAKNRVSKSVPILRKLVTSQHD---QYRLIALCEHMCAVQYPGIIFQ-FPVLLKLLYDDDLIDEECLFGWLKNEIRKQYADPIVSDNSYAKLKQHLQVFTDWLENAEEETDDD 403          
The following BLAST results are available for this feature:
BLAST of EWM28016.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585110357|gb|EWM28016.1|0.000e+0100.00eukaryotic translation initiation factor 5 [Nannoc... [more]
gi|695414224|ref|XP_009526246.1|4.137e-8942.53hypothetical protein PHYSODRAFT_559899 [Phytophtho... [more]
gi|301120402|ref|XP_002907928.1|4.352e-8841.61eukaryotic translation initiation factor 5, putati... [more]
gi|953487457|emb|CEG48285.1|1.293e-8341.72eukaryotic translation initiation factor 5 [Plasmo... [more]
gi|325192765|emb|CCA27172.1|5.367e-8339.28eukaryotic translation initiation factor 5 putativ... [more]
gi|673035262|ref|XP_008871592.1|2.582e-8238.48hypothetical protein H310_07857 [Aphanomyces invad... [more]
gi|635361188|emb|CCI49785.1|1.127e-7539.95unnamed protein product [Albugo candida][more]
gi|635361187|emb|CCI49784.1|1.307e-7539.95unnamed protein product [Albugo candida][more]
gi|397644022|gb|EJK76210.1|2.609e-6537.91hypothetical protein THAOC_02044 [Thalassiosira oc... [more]
gi|635361189|emb|CCI49786.1|4.040e-6538.48unnamed protein product [Albugo candida][more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2670rna2670Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications