EWM27984.1, cds2658 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27984.1 vs. NCBI_GenBank
Match: gi|585110325|gb|EWM27984.1| (phycoerythrobilin:ferredoxin oxidoreductase [Nannochloropsis gaditana]) HSP 1 Score: 669.078 bits (1725), Expect = 0.000e+0 Identity = 329/329 (100.00%), Postives = 329/329 (100.00%), Query Frame = 0
Query: 1 MVILPHHAPHSSSLTILLLITISHSRAFYILAPLVERSRTVLSAVSSDAPPAPSSNRPVVIYEGFWHEAKAMMDARQSSLPWKSQTIPFDLQRKVCTTPAKGKRLETVTVAEVFAYTVPGRIRQARAAVLSTIPEEAPPKVLNFVVFPDSSYDLPIFGADFVSLPGGHLVVLDFQPVSSTSLSVAEKALRDIHAHYTALLPSHGEIPDAARSFFSPYYMFIRVEGDALVETTVLAAFKAYFSAYLDLVEHASPIPVEETSRLLEVQEGHRNYATYRAVNDPARGMLTRMYGRSWTERLIYEVLFEQADRELEDDGGITVEAVRSGGTGG 329
MVILPHHAPHSSSLTILLLITISHSRAFYILAPLVERSRTVLSAVSSDAPPAPSSNRPVVIYEGFWHEAKAMMDARQSSLPWKSQTIPFDLQRKVCTTPAKGKRLETVTVAEVFAYTVPGRIRQARAAVLSTIPEEAPPKVLNFVVFPDSSYDLPIFGADFVSLPGGHLVVLDFQPVSSTSLSVAEKALRDIHAHYTALLPSHGEIPDAARSFFSPYYMFIRVEGDALVETTVLAAFKAYFSAYLDLVEHASPIPVEETSRLLEVQEGHRNYATYRAVNDPARGMLTRMYGRSWTERLIYEVLFEQADRELEDDGGITVEAVRSGGTGG
Sbjct: 1 MVILPHHAPHSSSLTILLLITISHSRAFYILAPLVERSRTVLSAVSSDAPPAPSSNRPVVIYEGFWHEAKAMMDARQSSLPWKSQTIPFDLQRKVCTTPAKGKRLETVTVAEVFAYTVPGRIRQARAAVLSTIPEEAPPKVLNFVVFPDSSYDLPIFGADFVSLPGGHLVVLDFQPVSSTSLSVAEKALRDIHAHYTALLPSHGEIPDAARSFFSPYYMFIRVEGDALVETTVLAAFKAYFSAYLDLVEHASPIPVEETSRLLEVQEGHRNYATYRAVNDPARGMLTRMYGRSWTERLIYEVLFEQADRELEDDGGITVEAVRSGGTGG 329
BLAST of EWM27984.1 vs. NCBI_GenBank
Match: gi|553196288|ref|XP_005856310.1| (phycoerythrobilin:ferredoxin oxidoreductase, partial [Nannochloropsis gaditana CCMP526] >gi|422292749|gb|EKU20051.1| phycoerythrobilin:ferredoxin oxidoreductase, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 243.817 bits (621), Expect = 2.915e-78 Identity = 121/123 (98.37%), Postives = 122/123 (99.19%), Query Frame = 0
Query: 108 VTVAEVFAYTVPGRIRQARAAVLSTIPEEAPPKVLNFVVFPDSSYDLPIFGADFVSLPGGHLVVLDFQPVSSTSLSVAEKALRDIHAHYTALLPSHGEIPDAARSFFSPYYMFIRVEGDALVE 230
VTVAEVFAYTVPGRIRQARAAVLSTIPEEAPPKVLNFVVFPD SYDLPIFGADFVSLPGGHLVVLDFQPVSSTSLSVAEKALRDIHAHY+ALLPSHGEIPDAARSFFSPYYMFIRVEGDALVE
Sbjct: 1 VTVAEVFAYTVPGRIRQARAAVLSTIPEEAPPKVLNFVVFPDFSYDLPIFGADFVSLPGGHLVVLDFQPVSSTSLSVAEKALRDIHAHYSALLPSHGEIPDAARSFFSPYYMFIRVEGDALVE 123
BLAST of EWM27984.1 vs. NCBI_GenBank
Match: gi|754101465|ref|WP_041739787.1| (phycoerythrobilin:ferredoxin oxidoreductase [Calothrix parietina]) HSP 1 Score: 177.563 bits (449), Expect = 1.682e-50 Identity = 104/250 (41.60%), Postives = 141/250 (56.40%), Query Frame = 0
Query: 59 VVIYEGFWHEAKAMMDARQSSLPWKSQTIPFDLQRKVCTTPAKGKRLETVTVAEVFAYTVPGRIRQARAAVLSTIPEEAPPKVLNFVVFPDSSYDLPIFGADFVSLPGGHLVVLDFQPVSSTSLSVAEKALR---DIHAHYTALLPSHGEIPDAARSFFSPYYMFIRVEGDALVETTVLAAFKAYFSAYLDLVEHASPIPVEETSRLLEVQEGHRNYATYRAVNDPARGMLTRMYGRSWTERLIYEVLFE 305
+++Y+ F A A M +R LP + IP + K T KGK LETV +A+ P ++RQ RAA + +VLNFV+FP +YDLP FGAD V+LPGGHL+ LD QP+ + EK + I + LP G+ P A+ FFSP +++ R++ +VET+V AAFK Y AY+D V+ A PI + RL E++ H Y YRA DPARGM R YG WTE I+ LF+
Sbjct: 1 MMLYQPFLDHAIAYMRSR---LPISAYPIPPGFESKSAET-GKGKNLETVLTTS-YAFQTP-KLRQIRAA---HVQGGKSLQVLNFVIFPHLNYDLPFFGADLVTLPGGHLIALDMQPLFRDNAKYQEKYTQPILPIFEQHKENLPWGGDFPAEAQQFFSPAFLWTRLQDTNVVETSVFAAFKDYLQAYVDFVDQAEPI--NDPDRLAEIERSHLRYLHYRAEKDPARGMFKRFYGEEWTEEYIHGFLFD 239
BLAST of EWM27984.1 vs. NCBI_GenBank
Match: gi|428237147|gb|AFZ02937.1| (Phycoerythrobilin:ferredoxin oxidoreductase [Calothrix sp. PCC 6303]) HSP 1 Score: 176.792 bits (447), Expect = 2.708e-50 Identity = 104/249 (41.77%), Postives = 140/249 (56.22%), Query Frame = 0
Query: 60 VIYEGFWHEAKAMMDARQSSLPWKSQTIPFDLQRKVCTTPAKGKRLETVTVAEVFAYTVPGRIRQARAAVLSTIPEEAPPKVLNFVVFPDSSYDLPIFGADFVSLPGGHLVVLDFQPVSSTSLSVAEKALR---DIHAHYTALLPSHGEIPDAARSFFSPYYMFIRVEGDALVETTVLAAFKAYFSAYLDLVEHASPIPVEETSRLLEVQEGHRNYATYRAVNDPARGMLTRMYGRSWTERLIYEVLFE 305
++Y+ F A A M +R LP + IP + K T KGK LETV +A+ P ++RQ RAA + +VLNFV+FP +YDLP FGAD V+LPGGHL+ LD QP+ + EK + I + LP G+ P A+ FFSP +++ R++ +VET+V AAFK Y AY+D V+ A PI + RL E++ H Y YRA DPARGM R YG WTE I+ LF+
Sbjct: 1 MLYQPFLDHAIAYMRSR---LPISAYPIPPGFESKSAET-GKGKNLETVLTTS-YAFQTP-KLRQIRAA---HVQGGKSLQVLNFVIFPHLNYDLPFFGADLVTLPGGHLIALDMQPLFRDNAKYQEKYTQPILPIFEQHKENLPWGGDFPAEAQQFFSPAFLWTRLQDTNVVETSVFAAFKDYLQAYVDFVDQAEPI--NDPDRLAEIERSHLRYLHYRAEKDPARGMFKRFYGEEWTEEYIHGFLFD 238
BLAST of EWM27984.1 vs. NCBI_GenBank
Match: gi|1105015369|ref|WP_071800992.1| (phycoerythrobilin:ferredoxin oxidoreductase [Synechococcus sp. SynAce01] >gi|1104555456|gb|APD48354.1| phycoerythrobilin:ferredoxin oxidoreductase [Synechococcus sp. SynAce01]) HSP 1 Score: 174.096 bits (440), Expect = 2.426e-49 Identity = 100/252 (39.68%), Postives = 141/252 (55.95%), Query Frame = 0
Query: 62 YEGFWHEAKAMMDARQSSLPWKSQTIPFDLQRKVCTTPAKGKRLETVTVAEVFAYTVPGRIRQARAAVLSTIPEEAPPKVLNFVVFPDSSYDLPIFGADFVSLPGGHLVVLDFQPV---SSTSLSVAEKALRDIHAHYTALLPSHGEIPDAARSFFSPYYMFIRV----EGDALVETTVLAAFKAYFSAYLDLVEHASPIPVEETSRLLEVQEGHRNYATYRAVNDPARGMLTRMYGRSWTERLIYEVLFEQ 306
+E F++ A + A+ + P+ IP + KV +T G R + + V ++RQARAA + P P+VLN V+ P+ +DLP FGAD V+LPGGHL+ LD QPV LR + H+ ALLP G IPD A +FSP +++ R+ E + L+E ++AAF AY YLDL+ A+P+ + SR+ +++EG Y YRA DPARGMLTR YG WTE I+ LF+
Sbjct: 5 WEPFFNHAVTQITAKLALEPYP---IPAGMAEKVGST---GSRAKPIAVTTTSWGVRNDKLRQARAACVDAEPN---PQVLNLVISPEPRFDLPFFGADLVTLPGGHLIALDLQPVLKRDRLHTQAVWSRLRPVFDHFRALLPDGGPIPDEAEPYFSPCFLWTRLPLTAESETLIEGPLMAAFVAYLDLYLDLIAEANPV---DDSRMQQLKEGQLRYLDYRAEKDPARGMLTRFYGEEWTEAYIHGFLFDH 244
BLAST of EWM27984.1 vs. NCBI_GenBank
Match: gi|504987804|ref|WP_015174906.1| (phycoerythrobilin:ferredoxin oxidoreductase [Oscillatoria nigro-viridis] >gi|428239793|gb|AFZ05579.1| phycoerythrobilin:ferredoxin oxidoreductase [Oscillatoria nigro-viridis PCC 7112]) HSP 1 Score: 173.711 bits (439), Expect = 4.454e-49 Identity = 104/250 (41.60%), Postives = 140/250 (56.00%), Query Frame = 0
Query: 59 VVIYEGFWHEAKAMMDARQSSLPWKSQTIPFDLQRKVCTTPAKGKRLE-TVTVAEVFAYTVPGRIRQARAAVLSTIPEEAPPKVLNFVVFPDSSYDLPIFGADFVSLPGGHLVVLDFQPVSSTSLSVAE--KALRDIHAHYTALLPSHGEIPDAARSFFSPYYMFIRVEGDALVETTVLAAFKAYFSAYLDLVEHASPIPVEETSRLLEVQEGHRNYATYRAVNDPARGMLTRMYGRSWTERLIYEVLFE 305
+ +Y+ F A ++ AR P+ IP +RK T KGK+ + VT + F + ++RQ RAA + +VLNFV+FP +YDLP FGAD V+LPGGHL+ LD QP+ + + + + I Y LP G+ PD A+ FFSP +++ R + V+TTV AFK Y AYLDLVE A PV ++ RL E+ E R Y YRA DPARGM TR YG WTE I+ LF+
Sbjct: 1 MTLYQPFLDYAIPLLKARLDLAPY---PIPAGFERKEALT-GKGKKEQLVVTTSHAFKSS---KLRQIRAA---HVEGGDALQVLNFVIFPQLNYDLPFFGADLVTLPGGHLIALDMQPLFHEAAYQKQYSEPILPIFNKYQKELPWGGDFPDEAKPFFSPAFLWTRPKETEAVQTTVFEAFKDYLQAYLDLVEQAQ--PVTDSQRLGEILEAQRRYIDYRAAKDPARGMFTRFYGEEWTEEYIHGFLFD 238
BLAST of EWM27984.1 vs. NCBI_GenBank
Match: gi|493576615|ref|WP_006529743.1| (phycoerythrobilin:ferredoxin oxidoreductase [Gloeocapsa sp. PCC 73106] >gi|442787741|gb|ELR97454.1| phycoerythrobilin:ferredoxin oxidoreductase [Gloeocapsa sp. PCC 73106]) HSP 1 Score: 171.4 bits (433), Expect = 3.795e-48 Identity = 102/256 (39.84%), Postives = 143/256 (55.86%), Query Frame = 0
Query: 59 VVIYEGFWHEAKAMMDARQSSLPWKSQTIPFDLQRKVCTTPAKGKRLETVTVAEVFAYTVPGRIRQARAAVLSTIPEEAPPKVLNFVVFPDSSYDLPIFGADFVSLPGGHLVVLDFQPVSSTSL---SVAEKALRDIHAHYTALLPSHGEIPDAARSFFSPYYMFIRVEGDALVETTVLAAFKAYFSAYLDLVEHASPIPVEETSRLLEVQEGHRNYATYRAVNDPARGMLTRMYGRSWTERLIYEVLFEQADREL 311
+ +Y+ F A +M + S P+ IP ++K T KG + ET + +AY P ++RQ RAA + +VLNFV+FP+ +YDLP FGAD V+LPGGHL+ LD QP+ L + +L I + + LP G+ PD A+SFFSP +++ R + +VET VL AFK Y YL VE A V + + LE+ + Y YRA DPARGM TR+YG WTE I+ LF+ +R+L
Sbjct: 1 MTLYQPFLDYAINLMQEQLSLEPYP---IPEGFEQKQGTM-GKGIK-ETTVLTTSYAYKCP-KLRQIRAA---HVEGGNSLQVLNFVIFPELNYDLPFFGADLVTLPGGHLIALDLQPLFHDELYQQKYYQGSLLSIFTNLSEQLPWGGDFPDEAKSFFSPVFLWTRPQQTEIVETLVLEAFKQYLQTYLSYVEQAQ--IVSDRQKQLEILAAQKRYVNYRATKDPARGMFTRLYGEEWTEEYIHGFLFD-LERQL 244
BLAST of EWM27984.1 vs. NCBI_GenBank
Match: gi|1189384387|gb|OSX71627.1| (hypothetical protein BU14_0518s0019 [Porphyra umbilicalis]) HSP 1 Score: 172.17 bits (435), Expect = 3.997e-48 Identity = 101/247 (40.89%), Postives = 134/247 (54.25%), Query Frame = 0
Query: 61 IYEGFWHEAKAMMDARQSSLPWKSQTIPFDLQRKVCTTPAKGKRLETVTVAEVFAYTVPGRIRQARAAVLSTIPEEAPPKVLNFVVFPDSSYDLPIFGADFVSLPGGHLVVLDFQPVSSTSLSVAE--KALRDIHAHYTALLPSHGEIPDAARSFFSPYYMFIRVEGDALVETTVLAAFKAYFSAYLDLVEHASPIPVEETSRLLEVQEGHRNYATYRAVNDPARGMLTRMYGRSWTERLIYEVLFE 305
+Y FW A +M R L IP K + KGKR VT + +AY P ++RQ RAA + A +VLN+V+FP +Y +P FGAD V+LPGGHL+ +D QP+ T AE A + +HA + A+LP G+ P A FFSP +++ R GD ++ V AFK Y YLD VE A PV + + +Q H+ Y TYRA DPARGM R YG WTE I+ LF+
Sbjct: 24 LYTPFWDYAVKVMKERLPDL--GPYPIPDGYVHKEAMS-GKGKRAALVTT-DAYAYQTP-KLRQIRAA---HVQGGAALQVLNYVMFPHMNYRIPFFGADLVTLPGGHLIAIDMQPLFHTDEYKAEFYDAFKAVHAKHQAVLPWGGDFPAEAAKFFSPVFLWTRTTGDEAIQGPVFDAFKDYLHTYLDFVEKAE--PVSDPEEIAAIQASHKAYLTYRAEKDPARGMFLRFYGEEWTEEFIHGFLFD 260
BLAST of EWM27984.1 vs. NCBI_GenBank
Match: gi|808794782|ref|WP_046277494.1| (phycoerythrobilin:ferredoxin oxidoreductase [Limnoraphis robusta] >gi|807217096|gb|KKD39075.1| phycoerythrobilin:ferredoxin oxidoreductase [Limnoraphis robusta CS-951]) HSP 1 Score: 170.244 bits (430), Expect = 7.673e-48 Identity = 104/256 (40.62%), Postives = 147/256 (57.42%), Query Frame = 0
Query: 59 VVIYEGFWHEAKAMMDARQSSLPWKSQTIPFDLQRKVCTTPAKGKRLETVTVAEVFAYTVPGRIRQARAAVLSTIPEEAPPKVLNFVVFPDSSYDLPIFGADFVSLPGGHLVVLDFQPV---SSTSLSVAEKALRDIHAHYTALLPSHGEIPDAARSFFSPYYMFIRVEGDALVETTVLAAFKAYFSAYLDLVEHASPIPVEETSRLLEVQEGHRNYATYRAVNDPARGMLTRMYGRSWTERLIYEVLFEQADREL 311
+ +Y+ F A A+M R S P+ TIP + K TT KGK+ ET+ + +A+ ++RQ RAA + +VLNFV+FP +YDLP FGAD V+LPGGHL+ LD QP+ ++ E L H L G+ P+ A+SFFSP +++ R + +V+T V AFK Y AYL+ VE A PI ++ RL ++ + R+Y YRA DPARGM TR YG +WTE I+ LF+ +R+L
Sbjct: 1 MTLYQPFLDYALAVMQERLSLQPY---TIPEGFECKQETT-GKGKKQETI-ITTSYAFK-SAKLRQIRAA---HVQGGNSLQVLNFVIFPQLTYDLPFFGADLVTLPGGHLIALDMQPLFHDTAYQQQYTEPILPIFQTH-QQHLSWGGDFPEEAKSFFSPAFLWTRPKETEVVQTRVFEAFKDYLEAYLNFVEQAQPIT--DSQRLSDILQAQRSYVRYRAAKDPARGMFTRFYGEAWTEEYIHGFLFD-LERQL 243
BLAST of EWM27984.1 vs. NCBI_GenBank
Match: gi|652390917|ref|WP_026786765.1| (MULTISPECIES: phycoerythrobilin:ferredoxin oxidoreductase [Planktothrix] >gi|1108748039|emb|CUR27152.1| Phycoerythrobilin:ferredoxin oxidoreductase [Planktothrix rubescens]) HSP 1 Score: 169.859 bits (429), Expect = 1.089e-47 Identity = 104/256 (40.62%), Postives = 146/256 (57.03%), Query Frame = 0
Query: 59 VVIYEGFWHEAKAMMDARQSSLPWKSQTIPFDLQRKVCTTPAKGKRLETVTVAEVFAYTVPGRIRQARAAVLSTIPEEAPPKVLNFVVFPDSSYDLPIFGADFVSLPGGHLVVLDFQPV--SSTSLSVAEKALRDIHAHYTALLPSHGEIPDAARSFFSPYYMFIRVEGDALVETTVLAAFKAYFSAYLDLVEHASPIPVEETSRLLEVQEGHRNYATYRAVNDPARGMLTRMYGRSWTERLIYEVLFEQADRELE 312
+ +Y+ F A ++ + LP S IP ++K T KGKR + V + + Y P ++RQ RAA + EA +VLNFV+FP +YDLP FGAD V+LPGGHL+ LD QP+ +ST + + I Y LP G+ P+ A+ FFSP +++ R + +V+T V AFKAY AYL+ VE A PI E + ++ + + Y +YRA DPARGM TR YG WTE I+ LF+ +R LE
Sbjct: 1 MTLYQPFLDYALTLLKEK---LPLTSYPIPPGFEQKEEIT-GKGKR-QQVVITTSYGYQTP-KLRQIRAAHVQG--GEAL-QVLNFVIFPHLNYDLPFFGADLVTLPGGHLIALDMQPLFHNSTYQQKYTEPILPIFQQYQQHLPWGGDFPEEAQPFFSPAFLWTRPQETEVVKTHVFEAFKAYLQAYLEFVEQAQPIDNSEQRQ--DILQAQKRYVSYRAEKDPARGMFTRFYGEEWTEEYIHGFLFD-LERYLE 244 The following BLAST results are available for this feature:
BLAST of EWM27984.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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