EWM28025.1, cds2647 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28025.1 vs. NCBI_GenBank
Match: gi|585110366|gb|EWM28025.1| (hypothetical protein Naga_100008g20 [Nannochloropsis gaditana]) HSP 1 Score: 1129.39 bits (2920), Expect = 0.000e+0 Identity = 541/541 (100.00%), Postives = 541/541 (100.00%), Query Frame = 0 Query: 1 MSSSSEVPSVLLPVQDVDVLLRRLLAPEKEHESERMDCGYGREHIYDSDELLLSNVASLLAFPLGGICSIFLLLLGTYTHFCTACRRFIVAWADQIEATWQSLRLSRFHLQDHRNINIKRPKLMPRMISHGTNSKTGLYWCGLGDVCERDDLIFTPYFDPKKPSVVYVHGYQPRTIIRCFRESLNWGDNDNEFGLDMNAADHWLKAGWNVGVFYWSSYADEDYIHDAEAKIWSNQTSVGMRYRSLTKCGTRVKWRYVSSDVPCVAHQLASVLRQRFTSDTAGYRLVGHSLGAQVVIHAATLLARAKRRQANAVCLQDGIVNCDVTLDEKTRGKVQGVPNVAPGMEYLGPGGTSDADYIPYTVGSSRTREASFLLPTRIALLDAFFTLEPKRYVGWRSLASVLKEELANLVQEEDVVFEQYRTSLLSFAANFHLKPFTAFFDLNPKHIPWWKLRARHVCAPYLYFHSMASLEVGRRVMKDVGGAWTAFWGQIYHQDMLEDEDSFRGIATTPDAHLRLLMQRYAMEGIWELFTHISCYPLSRH 541 MSSSSEVPSVLLPVQDVDVLLRRLLAPEKEHESERMDCGYGREHIYDSDELLLSNVASLLAFPLGGICSIFLLLLGTYTHFCTACRRFIVAWADQIEATWQSLRLSRFHLQDHRNINIKRPKLMPRMISHGTNSKTGLYWCGLGDVCERDDLIFTPYFDPKKPSVVYVHGYQPRTIIRCFRESLNWGDNDNEFGLDMNAADHWLKAGWNVGVFYWSSYADEDYIHDAEAKIWSNQTSVGMRYRSLTKCGTRVKWRYVSSDVPCVAHQLASVLRQRFTSDTAGYRLVGHSLGAQVVIHAATLLARAKRRQANAVCLQDGIVNCDVTLDEKTRGKVQGVPNVAPGMEYLGPGGTSDADYIPYTVGSSRTREASFLLPTRIALLDAFFTLEPKRYVGWRSLASVLKEELANLVQEEDVVFEQYRTSLLSFAANFHLKPFTAFFDLNPKHIPWWKLRARHVCAPYLYFHSMASLEVGRRVMKDVGGAWTAFWGQIYHQDMLEDEDSFRGIATTPDAHLRLLMQRYAMEGIWELFTHISCYPLSRH Sbjct: 1 MSSSSEVPSVLLPVQDVDVLLRRLLAPEKEHESERMDCGYGREHIYDSDELLLSNVASLLAFPLGGICSIFLLLLGTYTHFCTACRRFIVAWADQIEATWQSLRLSRFHLQDHRNINIKRPKLMPRMISHGTNSKTGLYWCGLGDVCERDDLIFTPYFDPKKPSVVYVHGYQPRTIIRCFRESLNWGDNDNEFGLDMNAADHWLKAGWNVGVFYWSSYADEDYIHDAEAKIWSNQTSVGMRYRSLTKCGTRVKWRYVSSDVPCVAHQLASVLRQRFTSDTAGYRLVGHSLGAQVVIHAATLLARAKRRQANAVCLQDGIVNCDVTLDEKTRGKVQGVPNVAPGMEYLGPGGTSDADYIPYTVGSSRTREASFLLPTRIALLDAFFTLEPKRYVGWRSLASVLKEELANLVQEEDVVFEQYRTSLLSFAANFHLKPFTAFFDLNPKHIPWWKLRARHVCAPYLYFHSMASLEVGRRVMKDVGGAWTAFWGQIYHQDMLEDEDSFRGIATTPDAHLRLLMQRYAMEGIWELFTHISCYPLSRH 541
BLAST of EWM28025.1 vs. NCBI_GenBank
Match: gi|1149917095|ref|WP_077848421.1| (cell adhesion domain-containing protein [Clostridium puniceum] >gi|1149498833|gb|OOM75263.1| hypothetical protein CLPUN_33930 [Clostridium puniceum]) HSP 1 Score: 166.007 bits (419), Expect = 1.072e-42 Identity = 101/338 (29.88%), Postives = 164/338 (48.52%), Query Frame = 0 Query: 136 TGLYWCGLGDVCER-DDLIFTPYFDPKKPSVVYVHGYQPRTIIRCFRESLNWGDNDNEFGLDMNAADHWLKAGWNVGVFYWSSYADEDYIHDAEAKIWSNQTSVGMRYRSLTKCGTRVKWRYVSSDVPCVAHQLASVLRQRFTSDTAGYRLVGHSLGAQVVIHAATLLARAKRRQANAVCLQDGIVNCDVTLDEKTRGKVQGVPNVAPGMEYLGPGGTSDADYIPYTVGSSRTREASFLLPTRIALLDAFFTLEPKRYVGWRSLASVLKEELANLVQEEDVVFEQYRTS----LLSFAANFHLKPFTAFFDLNPKHIPWWKLRARHVCAPYLYFHSMA 468 TG+YW G + E+ + YFDP KP+V+Y+HG+Q + + RE+ N N++ L++N+AD+W+KAGWN+G+FYW+ +ADE + DAEAKIW+N+TS MR+R + G+ + V + + + FT RLVGHSLG Q+VI+++ L ++D I + + +++ L P R+ALLD F++ K Y+G V +E + L +E+ VVFE+Y++S LL +N ++ F D P ++P+ +H + YF+S Sbjct: 35 TGIYWFGQNNQSEKYVEGQKNSYFDPSKPTVIYIHGWQNGSTKKLHRETFNATSNNSGIDLNVNSADYWVKAGWNIGIFYWNQFADEGELKDAEAKIWTNETSKKMRWRKID--GSYESYAGSEKSVAEIFKNVYGKAMKNFTGSEI--RLVGHSLGNQMVINSSKL-------------IEDSISSGEFSIN---------------------------------------------LRPNRVALLDPFWSKGGKSYLGGEWTGEVCREYVTKL-KEKGVVFEEYKSSNINDLLIGDSNLEMRKLAVFTDFYPDYVPFIDQSGKHAASREWYFYSFT 309
BLAST of EWM28025.1 vs. NCBI_GenBank
Match: gi|1028465953|gb|ANE48876.1| (cell adhesion domain-containing protein [Paenibacillus swuensis]) HSP 1 Score: 165.236 bits (417), Expect = 1.525e-42 Identity = 103/345 (29.86%), Postives = 165/345 (47.83%), Query Frame = 0 Query: 131 GTNSKTGLYWCGLGDVCERDDL-IFTPYFDPKKPSVVYVHGYQPRTIIRCFRESLNWGDNDNEFGLDMNAADHWLKAGWNVGVFYWSSYADEDYIHDAEAKIWSNQTSVGMRYRSLTKCGTRVKWRYVSSDVPCVAHQLASVLRQRFTSDT-AGYRLVGHSLGAQVVIHAATLLARAKRRQANAVCLQDGIVNCDVTLDEKTRGKVQGVPNVAPGMEYLGPGGTSDADYIPYTVGSSRTREASFLLPTRIALLDAFFTLEPKRYVGWRSLASVLKEELANLVQEEDVVFEQYRTSLLSFAA----NFHLKPFTAFFDLNPKHIPWWKLRARHVCAPYLYFHSMAS 469 GT G+YW G G+V ++ + PY++P KP+++YVHG+Q T FRE+ N+ ND +G+++N AD W+ AGWN+G+FYW+ +ADE + DAEAKIW+ MR+R K GT Y++ ++ T + R+ GHSLG Q+ + L++ D+ T G++ S LLP R+ALLD F++ +PK Y+ + + +++L + + ++FEQY++S ++ N L+ TAF L P +IP + +H+ AP YF+S AS Sbjct: 20 GTTLDHGIYWYGSGNVSQKAVAGVGNPYYNPTKPTIIYVHGWQKDTTATAFRETFNYLHNDASYGVNVNTADAWVSAGWNIGIFYWNQFADEAEVKDAEAKIWTATGPKAMRWRK--KDGT-----YIAGPTKSAGDLFYDAYASAMSNYTGSNIRIAGHSLGNQMAVRLTKLVS-----------------------DKVTAGQLD-----------------------------------SKLLPKRVALLDPFWSKDPKSYLNNKWTGEETRNYVSHL-KTKGIIFEQYKSSGITDVGVGDMNAALEKMTAFSRLAPWYIPAQAIANKHIAAPNWYFYSYAS 298
BLAST of EWM28025.1 vs. NCBI_GenBank
Match: gi|1057236351|ref|WP_068606794.1| (cell adhesion domain-containing protein [Paenibacillus swuensis]) HSP 1 Score: 165.236 bits (417), Expect = 2.015e-42 Identity = 103/345 (29.86%), Postives = 165/345 (47.83%), Query Frame = 0 Query: 131 GTNSKTGLYWCGLGDVCERDDL-IFTPYFDPKKPSVVYVHGYQPRTIIRCFRESLNWGDNDNEFGLDMNAADHWLKAGWNVGVFYWSSYADEDYIHDAEAKIWSNQTSVGMRYRSLTKCGTRVKWRYVSSDVPCVAHQLASVLRQRFTSDT-AGYRLVGHSLGAQVVIHAATLLARAKRRQANAVCLQDGIVNCDVTLDEKTRGKVQGVPNVAPGMEYLGPGGTSDADYIPYTVGSSRTREASFLLPTRIALLDAFFTLEPKRYVGWRSLASVLKEELANLVQEEDVVFEQYRTSLLSFAA----NFHLKPFTAFFDLNPKHIPWWKLRARHVCAPYLYFHSMAS 469 GT G+YW G G+V ++ + PY++P KP+++YVHG+Q T FRE+ N+ ND +G+++N AD W+ AGWN+G+FYW+ +ADE + DAEAKIW+ MR+R K GT Y++ ++ T + R+ GHSLG Q+ + L++ D+ T G++ S LLP R+ALLD F++ +PK Y+ + + +++L + + ++FEQY++S ++ N L+ TAF L P +IP + +H+ AP YF+S AS Sbjct: 27 GTTLDHGIYWYGSGNVSQKAVAGVGNPYYNPTKPTIIYVHGWQKDTTATAFRETFNYLHNDASYGVNVNTADAWVSAGWNIGIFYWNQFADEAEVKDAEAKIWTATGPKAMRWRK--KDGT-----YIAGPTKSAGDLFYDAYASAMSNYTGSNIRIAGHSLGNQMAVRLTKLVS-----------------------DKVTAGQLD-----------------------------------SKLLPKRVALLDPFWSKDPKSYLNNKWTGEETRNYVSHL-KTKGIIFEQYKSSGITDVGVGDMNAALEKMTAFSRLAPWYIPAQAIANKHIAAPNWYFYSYAS 305
BLAST of EWM28025.1 vs. NCBI_GenBank
Match: gi|505204890|ref|WP_015391992.1| (cell adhesion domain-containing protein [Clostridium saccharoperbutylacetonicum] >gi|451784703|gb|AGF55671.1| cell adhesion domain-containing protein [Clostridium saccharoperbutylacetonicum N1-4(HMT)]) HSP 1 Score: 146.362 bits (368), Expect = 2.162e-35 Identity = 102/345 (29.57%), Postives = 160/345 (46.38%), Query Frame = 0 Query: 136 TGLYWCGLGDVCERDDLIF-----TPYFDPKKPSVVYVHGYQPRTIIRCFRESLNWGDNDNEFGLDMNAADHWLKAGWNVGVFYWSSYADEDYIHDAEAKIWSNQTSVGMRYRSLTKCGTRVKWRYVSSDVPCV-AHQLASVLRQRFTSDTAG--YRLVGHSLGAQVVIHAATLLARAKRRQANAVCLQDGIVNCDVTLDEKTRGKVQGVPNVAPGMEYLGPGGTSDADYIPYTVGSSRTREASFLLPTRIALLDAFFTLEPKRYVGWRSLASVLKEELANLVQEEDVVFEQYRTSLLS----FAANFHLKPFTAFFDLNPKHIPWWKLRARHVCAPYLYFHSMA 468 TG+YW G G+V ++ F YFD KP+V+Y+HG+Q + +RE N ND+ +G D++ ++W+ GWN+G+FYW+ +DE + DAEAKIW+ S GMR+R +V Y S +VP V A QL + + +G RL GHSLG+Q+VI+ L++ L GT ++ +P RI LLD F++ K Y+ + V + + +L + + VVFEQY++S ++ +N +K TAF D+ P + ++H + LYF+SM Sbjct: 43 TGIYWFGKGNVSQK----FVSGESNKYFDSSKPTVIYIHGWQKDKTEKLYREIFNPSHNDSSYGADVDTVNYWVDKGWNIGIFYWNQLSDESEVKDAEAKIWTTSGSKGMRWR-------KVDGSYNSINVPTVSAAQLFVDDYVKAMKNFSGSEIRLAGHSLGSQMVINGGMLISN------------------------------------------LVDSGTISSNILP----------------DRICLLDPFWSKGEKSYLDNKWTGEVSRNYVTSL-KTKGVVFEQYKSSNINDLWIGDSNDGMKQLTAFIDVYPDYTGLINQASKHGASRDLYFYSMG 317
BLAST of EWM28025.1 vs. NCBI_GenBank
Match: gi|1149916691|ref|WP_077848017.1| (cell adhesion domain-containing protein [Clostridium puniceum] >gi|1149499488|gb|OOM75901.1| hypothetical protein CLPUN_29380 [Clostridium puniceum]) HSP 1 Score: 143.665 bits (361), Expect = 1.902e-34 Identity = 72/178 (40.45%), Postives = 108/178 (60.67%), Query Frame = 0 Query: 130 HGTNSKTGLYWCGLGDVCER-DDLIFTPYFDPKKPSVVYVHGYQPRTIIRCFRESLNWGDNDNEFGLDMNAADHWLKAGWNVGVFYWSSYADEDYIHDAEAKIWSNQTSVGMRYRSLTKCGTRVKWRYVSSDVPCVA-HQLASVLRQRFTSDTAG--YRLVGHSLGAQVVIHAATLLA 303 +GT +YW G + E+ + PYFDPKKP+++Y+HG+Q + + +RES N D E+G+D+N AD+W+ GWNVG+FYW+ ++DE + DAEAKIW+ MR+R +V Y S++VP V+ QL ++ S+ +G RL GHSLG QVVI+ L++ Sbjct: 32 NGTKLDASIYWYGKNNAAEKFVEGQSNPYFDPKKPTIIYIHGWQKDSTTKLYRESFNPSTMDREYGVDVNLADYWIDKGWNVGIFYWNQFSDESEVKDAEAKIWTTSGPKSMRWR-------KVDGTYESNNVPTVSVAQLFVDNYKKAMSNFSGSEIRLAGHSLGGQVVINGTKLIS 202
BLAST of EWM28025.1 vs. NCBI_GenBank
Match: gi|916494577|ref|WP_051129953.1| (hypothetical protein [Caldicellulosiruptor acetigenus]) HSP 1 Score: 136.346 bits (342), Expect = 1.204e-31 Identity = 104/338 (30.77%), Postives = 156/338 (46.15%), Query Frame = 0 Query: 137 GLYWCGLGDVCER-DDLIFTPYFDPKKPSVVYVHGYQPRTIIRCFRESLNWGDNDNEFGLDMNAADHWLKAGWNVGVFYWSSYADEDYIHDAEAKIWSNQTSVGMRYRSLTKCGTRVKWRYVSSDVPCVAHQLASVLRQRFTSDTAG--YRLVGHSLGAQVVIHAATLLARAKRRQANAVCLQDGIVNCDVTLDEKTRGKVQGVPNVAPGMEYLGPGGTSDA--DYIPYTVGSSRTREASFLLPTRIALLDAFFTLEPKRYVGWRSLASVLKEELANLVQEEDVVFEQYRTSLLSFAANFHLKPFTAFFDLNPKHIPWWKLRARHVCAPYLYFHSMAS 469 GLYW GLG+ + ++ PY+DP KP+V+YVHG++ T IR FRE+ N+ ND +G+D+N AD W+KAGWN+G+FYW ++DE + DAEAKIW+ MR+R K + S A QL + D G R+VGHSLG Q+ I+ A ++ A + CL ++ + L + G +YL T + +YI + + S L A+ F + + EL N+V A+ +LKP+ +IP +++ A+HV AP LYF S + Sbjct: 47 GLYWFGLGNKSVKFEEGKVNPYYDPNKPTVIYVHGWEKDTGIRNFRETFNYKLNDPTYGIDINIADAWIKAGWNIGIFYWDMFSDEPNVLDAEAKIWTAYGPKKMRWRD-------NKGEFHESTFNKSAGQLFYETFVKALKDYKGNNIRIVGHSLGNQMAIYLAYMVNNAVAKG----CLPSNLMIKRLALLDPYWS--------VGGKDYLNGKWTGEVCREYIK----DLKNKNVSIELYRTTAIAQLPFVADENK-------------ELLNMV------------------AHVNLKPW---------YIPAYEVGAKHVAAPNLYFMSFGA 321
BLAST of EWM28025.1 vs. NCBI_GenBank
Match: gi|923121075|ref|XP_013754009.1| (hypothetical protein AMSG_12301 [Thecamonas trahens ATCC 50062] >gi|906560874|gb|KNC54117.1| hypothetical protein AMSG_12301 [Thecamonas trahens ATCC 50062]) HSP 1 Score: 139.428 bits (350), Expect = 3.646e-31 Identity = 109/345 (31.59%), Postives = 149/345 (43.19%), Query Frame = 0 Query: 155 TPYFDPKKPSVVYVHGYQPRTIIRCFRESLNWGDNDNEFGLDMNAADHWLKAGWNVGVFYWSSYADEDYIHDAEAKIWSNQTSVGMRYRSL-TKCGTRVKWR---YVSS--DVPCVAHQLASVLRQRFTS-------DTAGYRLVGHSLGAQVVIHAATLLARAKRRQANAVCLQDGIVNCDVTLDEKTRGKVQGVPNVAPGMEYLGPGGTSDADYIPYTVGSSRTREASFLLPTRIALLDAFFTLEPKRYVGWRSLASVLKEELANLVQ----EEDVVFEQYRTSLLSFAANFHLKPFTAFFDL--NPKHIPWWKLRARHVCAPYLYFHSMASLEVGRRVMKDV 480 P+FDP +V+YVHG+Q T IR FRE+ +W N GLD++ A WL GWNVG+FYW+ YADE + AEAKIW+ + VGMR+R L + V R + SS P VAH L + + + RLVGHSLGAQVV+ AA L QA A L PN P LPTR+ LLD FT K Y+G RS+ + L+ + L + E + + + + ++ A D+ +P IP + RH AP YF + A +++V Sbjct: 539 NPFFDPGARTVIYVHGWQKTTTIRGFRETFHWKANAPAHGLDVDVAAAWLDDGWNVGIFYWNQYADEPALRHAEAKIWTASSKVGMRWRRLVVEMDGPVPMRKTVHASSPPSTPSVAHLLCQAYIALYAAADDATPPTPSDIRLVGHSLGAQVVVAAAHEL----HHQAAAGAL----------------------PNWLP-------------------------------LPTRVTLLDPVFTPGKKSYLGRRSIGTTLRRLVDALARYGLAVESIKYSKVNELWSGSDRSKRVRLHAAHVDMRSDPASIPKHAITHRHSSAPSHYFFAYAPRRPSEHALEEV 826
BLAST of EWM28025.1 vs. NCBI_GenBank
Match: gi|836726222|ref|WP_047858285.1| (hypothetical protein [Archangium gephyra] >gi|827424579|gb|AKJ04475.1| Hypothetical protein AA314_06101 [Archangium gephyra]) HSP 1 Score: 134.42 bits (337), Expect = 3.934e-31 Identity = 65/174 (37.36%), Postives = 107/174 (61.49%), Query Frame = 0 Query: 137 GLYWCGLGDVCERD-DLIFTPYFDPKKPSVVYVHGYQPRTIIRCFRESLNWGDNDNEFGLDMNAADHWLKAGWNVGVFYWSSYADEDYIHDAEAKIWSNQTSVGMRYRSLTKC-GTRVKWRYVSSDVPCVAHQLASVLRQRFTSDTAGY-----RLVGHSLGAQVVIHAATLLA 303 G+YW GLG+ ++ ++ PYF+ KP+V+YVHG+Q ++ RE+ N+ +ND+ +G+++N AD W+ AGWN+G+FYW+ +ADE + +AE KIW+ MR+R +C GT Y ++ P V+ A + T++ A + RLVGHSLG+Q+ + +L+ Sbjct: 38 GIYWYGLGNTSQKAVPGVYNPYFNAAKPTVIYVHGWQKDGVVNGKRETFNYAENDSTYGVNVNMADAWINAGWNIGIFYWNQFADEPEVKNAETKIWTGTGPQAMRWR---QCDGT-----YTTTGSPTVS--AAQLFYNAITANMANFSGPHLRLVGHSLGSQMAHRTSIMLS 201
BLAST of EWM28025.1 vs. NCBI_GenBank
Match: gi|922882902|gb|KOO48641.1| (cell adhesion domain-containing protein [Bacillus koreensis]) HSP 1 Score: 132.494 bits (332), Expect = 1.205e-30 Identity = 73/174 (41.95%), Postives = 99/174 (56.90%), Query Frame = 0 Query: 136 TGLYWCGLGDVCERDDLIF---TPYFDPKKPSVVYVHGYQPRTIIRCFRESLNWGDNDNEFGLDMNAADHWLKAGWNVGVFYWSSYADEDYIHDAEAKIWSNQTSVGMRYRSLTKCGTRVKWRYVSSDVPCV--AHQLASVLRQRFTSDTAG-YRLVGHSLGAQVVIHAATLLA 303 TG+YW G G+V ++ I YF+ KP+V+Y+HG+Q T FRE+ N ND G D+N D+W+ GWNVG+FYW+ ADE + DAEAKIWS + GMR+R K GT Y +S P V A + +Q T RL GHSLG+Q+V + A L++ Sbjct: 25 TGIYWFGSGNVSQK--FIAGQSNSYFNASKPTVIYIHGWQNGTTASLFRETFNPKRNDPTNGPDVNTVDYWVAKGWNVGIFYWNQLADESEVKDAEAKIWSTSGTQGMRWRK--KDGT-----YSTSGAPTVSAAQLFVNTYKQAMQGFTGSEVRLAGHSLGSQMVTNGAKLIS 189 The following BLAST results are available for this feature:
BLAST of EWM28025.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|