EWM27970.1, cds2637 (CDS) Nannochloropsis gaditana

Overview
NameEWM27970.1
Unique Namecds2637
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002459.1:872876..873688 -

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Properties
Property NameValue
Protein idEWM27970.1
ProductHyaluronan/mRNA-binding protein
Orig transcript idgnl|cribi|Naga_100008g9.7862.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:872876..873688 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: INTERPRO
TermDefinition
IPR006861HABP4_PAIRBP1-bd
Homology
[Close]
BLAST of EWM27970.1 vs. NCBI_GenBank
Match: gi|585110311|gb|EWM27970.1| (Hyaluronan/mRNA-binding protein [Nannochloropsis gaditana])

HSP 1 Score: 491.115 bits (1263), Expect = 1.123e-174
Identity = 270/270 (100.00%), Postives = 270/270 (100.00%), Query Frame = 0 
Query:    1 MGVGGRCVRGGAGRQENGREAREPKQHARDEHRQHERRDGTGRGGRRQHRNGTGKFNWGEEAVEPIEPLAEDEEREEGEGEGEGEGEGEDGKLRESGRKGEGREESEPEPEPPTKSYSEYQAEMAEVKRKNAELFGTAKEREVDSSELSKLTVVKREEEEEEEEGEEGAGRRKASAQRASGRQLLNASFRSGGDSGFRGERGGRGGRGGRGDGRRGEGERGGRGRGRGEGEPGRRGGRLGGEGRGTRGGRGGRGGGARLNIDDKSMFPTL 270
            MGVGGRCVRGGAGRQENGREAREPKQHARDEHRQHERRDGTGRGGRRQHRNGTGKFNWGEEAVEPIEPLAEDEEREEGEGEGEGEGEGEDGKLRESGRKGEGREESEPEPEPPTKSYSEYQAEMAEVKRKNAELFGTAKEREVDSSELSKLTVVKREEEEEEEEGEEGAGRRKASAQRASGRQLLNASFRSGGDSGFRGERGGRGGRGGRGDGRRGEGERGGRGRGRGEGEPGRRGGRLGGEGRGTRGGRGGRGGGARLNIDDKSMFPTL
Sbjct:    1 MGVGGRCVRGGAGRQENGREAREPKQHARDEHRQHERRDGTGRGGRRQHRNGTGKFNWGEEAVEPIEPLAEDEEREEGEGEGEGEGEGEDGKLRESGRKGEGREESEPEPEPPTKSYSEYQAEMAEVKRKNAELFGTAKEREVDSSELSKLTVVKREEEEEEEEGEEGAGRRKASAQRASGRQLLNASFRSGGDSGFRGERGGRGGRGGRGDGRRGEGERGGRGRGRGEGEPGRRGGRLGGEGRGTRGGRGGRGGGARLNIDDKSMFPTL 270
The following BLAST results are available for this feature:
BLAST of EWM27970.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585110311|gb|EWM27970.1|1.123e-174100.00Hyaluronan/mRNA-binding protein [Nannochloropsis g... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2645rna2645Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications