EWM28015.1, cds2636 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM28015.1 vs. NCBI_GenBank
Match: gi|585110356|gb|EWM28015.1| (hypothetical protein Naga_100008g8 [Nannochloropsis gaditana]) HSP 1 Score: 783.097 bits (2021), Expect = 0.000e+0 Identity = 376/376 (100.00%), Postives = 376/376 (100.00%), Query Frame = 0 Query: 1 MSRRNFQISCYSQKKTHHIPVTHRTISVSFFSTAVLLWRRLSSFPPVTSATSYSLSARGGLQTSAFAPSSFLLHNPALAGTKGKYPASARGGWTIMPSSKSSSSSSSKKGAEAVAKSIQDPKPAKESTDSSSKNQRKSSRKRDPVDYNEEHVVVQEEAGASETTKNKKPRRDTPKVFSERQQEPSRDSKGVLHFKDHPEFLPNLTPKEVLRAGSFGGGYFRPIHSSVTGEDYSDAHKEFPSDWFEGLDMKRMITSKTYRPDINTYGVKCGGSLEMWESSGWITPVDPYGAFQWYCRFFLGRRSEDDARQIGRFNQVMGPTGRFRTNLMNQIVRKGKRFDDVNVSPVIRQTLQHWGYRLTEADFKAYCKKKGFECPT 376 MSRRNFQISCYSQKKTHHIPVTHRTISVSFFSTAVLLWRRLSSFPPVTSATSYSLSARGGLQTSAFAPSSFLLHNPALAGTKGKYPASARGGWTIMPSSKSSSSSSSKKGAEAVAKSIQDPKPAKESTDSSSKNQRKSSRKRDPVDYNEEHVVVQEEAGASETTKNKKPRRDTPKVFSERQQEPSRDSKGVLHFKDHPEFLPNLTPKEVLRAGSFGGGYFRPIHSSVTGEDYSDAHKEFPSDWFEGLDMKRMITSKTYRPDINTYGVKCGGSLEMWESSGWITPVDPYGAFQWYCRFFLGRRSEDDARQIGRFNQVMGPTGRFRTNLMNQIVRKGKRFDDVNVSPVIRQTLQHWGYRLTEADFKAYCKKKGFECPT Sbjct: 1 MSRRNFQISCYSQKKTHHIPVTHRTISVSFFSTAVLLWRRLSSFPPVTSATSYSLSARGGLQTSAFAPSSFLLHNPALAGTKGKYPASARGGWTIMPSSKSSSSSSSKKGAEAVAKSIQDPKPAKESTDSSSKNQRKSSRKRDPVDYNEEHVVVQEEAGASETTKNKKPRRDTPKVFSERQQEPSRDSKGVLHFKDHPEFLPNLTPKEVLRAGSFGGGYFRPIHSSVTGEDYSDAHKEFPSDWFEGLDMKRMITSKTYRPDINTYGVKCGGSLEMWESSGWITPVDPYGAFQWYCRFFLGRRSEDDARQIGRFNQVMGPTGRFRTNLMNQIVRKGKRFDDVNVSPVIRQTLQHWGYRLTEADFKAYCKKKGFECPT 376
BLAST of EWM28015.1 vs. NCBI_GenBank
Match: gi|553181952|ref|XP_005853652.1| (hypothetical protein NGA_0037902, partial [Nannochloropsis gaditana CCMP526] >gi|422295411|gb|EKU22710.1| hypothetical protein NGA_0037902, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 549.666 bits (1415), Expect = 0.000e+0 Identity = 269/270 (99.63%), Postives = 269/270 (99.63%), Query Frame = 0 Query: 24 RTISVSFFSTAVLLWRRLSSFPPVTSATSYSLSARGGLQTSAFAPSSFLLHNPALAGTKGKYPASARGGWTIMPSSKSSSSSSSKKGAEAVAKSIQDPKPAKESTDSSSKNQRKSSRKRDPVDYNEEHVVVQEEAGASETTKNKKPRRDTPKVFSERQQEPSRDSKGVLHFKDHPEFLPNLTPKEVLRAGSFGGGYFRPIHSSVTGEDYSDAHKEFPSDWFEGLDMKRMITSKTYRPDINTYGVKCGGSLEMWESSGWITPVDPYGAFQW 293 RTISVSFFSTAVLLWRRLSSFPPVTSAT YSLSARGGLQTSAFAPSSFLLHNPALAGTKGKYPASARGGWTIMPSSKSSSSSSSKKGAEAVAKSIQDPKPAKESTDSSSKNQRKSSRKRDPVDYNEEHVVVQEEAGASETTKNKKPRRDTPKVFSERQQEPSRDSKGVLHFKDHPEFLPNLTPKEVLRAGSFGGGYFRPIHSSVTGEDYSDAHKEFPSDWFEGLDMKRMITSKTYRPDINTYGVKCGGSLEMWESSGWITPVDPYGAFQW Sbjct: 1 RTISVSFFSTAVLLWRRLSSFPPVTSATFYSLSARGGLQTSAFAPSSFLLHNPALAGTKGKYPASARGGWTIMPSSKSSSSSSSKKGAEAVAKSIQDPKPAKESTDSSSKNQRKSSRKRDPVDYNEEHVVVQEEAGASETTKNKKPRRDTPKVFSERQQEPSRDSKGVLHFKDHPEFLPNLTPKEVLRAGSFGGGYFRPIHSSVTGEDYSDAHKEFPSDWFEGLDMKRMITSKTYRPDINTYGVKCGGSLEMWESSGWITPVDPYGAFQW 270
BLAST of EWM28015.1 vs. NCBI_GenBank
Match: gi|873240672|emb|CEL93163.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 280.796 bits (717), Expect = 4.252e-90 Identity = 129/198 (65.15%), Postives = 152/198 (76.77%), Query Frame = 0 Query: 175 KVFSERQQEPSRDSKGVLHFKDHPEFLPNLTPKEVLRAGSFGGGYFRPIHSSVTGEDYS--DAHKEFPSDWFEGLDMKRMITSKTYRPDINTYGVKCGGSLEMWESSGWITPVDPYGAFQWYCRFFLGRRSEDDARQIGRFNQVMGPTGRFRTNLMNQIVRKGKRFDDVNVSPVIRQTLQHWGYRLTEADFKAYCKKK 370 ++++ER P R G L F+D+P+F PNLTP EVL+ GSFGG YFR I+SSVTG+ Y EFP +WFEG++ RM+TS+TYR ++N Y VKCG SL+ WESSGWI DPYGAFQWYCRF+LGRRS DD RQI RF VMGPTGRFR+ L QI R+G R+DDV VSPVIRQTLQHWGY LTEAD+KAYCK K Sbjct: 57 EIYAERAPVPKRRPDGTLVFEDYPDFKPNLTPAEVLQRGSFGGTYFRSIYSSVTGKTYDPKQVLAEFPQEWFEGMNRGRMLTSQTYREEVNKYDVKCGQSLDQWESSGWIKKQDPYGAFQWYCRFYLGRRSSDDKRQISRFKGVMGPTGRFRSQLCGQINRRGTRYDDVQVSPVIRQTLQHWGYVLTEADYKAYCKAK 254
BLAST of EWM28015.1 vs. NCBI_GenBank
Match: gi|597788236|ref|XP_007257540.1| (PREDICTED: uncharacterized protein LOC103046511 isoform X2 [Astyanax mexicanus]) HSP 1 Score: 278.1 bits (710), Expect = 5.318e-89 Identity = 119/187 (63.64%), Postives = 148/187 (79.14%), Query Frame = 0 Query: 183 EPSRDSKGVLHFKDHPEFLPNLTPKEVLRAGSFGGGYFRPIHSSVTGEDYSDAHKEFPSDWFEGLDMKRMITSKTYRPDINTYGVKCGGSLEMWESSGWITPVDPYGAFQWYCRFFLGRRSEDDARQIGRFNQVMGPTGRFRTNLMNQIVRKGKRFDDVNVSPVIRQTLQHWGYRLTEADFKAYCKK 369 E R+ KG L F+DHPEF PN++PKEVL+AGSFGG YFRPI+SS+T + Y D HKE P DW +GLD+ + ++S YR ++NT+ VKCGGSLEMWESSGWI P DPYG FQWYCRF+ GRR+EDDARQI R+ + G GR+R NL+ ++VR G+RF D +VSPV+RQTLQHWGYRLTE D+K K+ Sbjct: 76 EVKRNKKGQLVFEDHPEFCPNMSPKEVLQAGSFGGTYFRPIYSSITKQHYKDVHKELPQDWLQGLDIHKQVSSAVYREEVNTFKVKCGGSLEMWESSGWIKPQDPYGWFQWYCRFYQGRRTEDDARQISRWAKCAGVKGRWRNNLITKVVRAGRRFADHSVSPVVRQTLQHWGYRLTEEDYKEGAKR 262
BLAST of EWM28015.1 vs. NCBI_GenBank
Match: gi|597788234|ref|XP_007257539.1| (PREDICTED: uncharacterized protein LOC103046511 isoform X1 [Astyanax mexicanus]) HSP 1 Score: 278.485 bits (711), Expect = 7.014e-89 Identity = 119/187 (63.64%), Postives = 148/187 (79.14%), Query Frame = 0 Query: 183 EPSRDSKGVLHFKDHPEFLPNLTPKEVLRAGSFGGGYFRPIHSSVTGEDYSDAHKEFPSDWFEGLDMKRMITSKTYRPDINTYGVKCGGSLEMWESSGWITPVDPYGAFQWYCRFFLGRRSEDDARQIGRFNQVMGPTGRFRTNLMNQIVRKGKRFDDVNVSPVIRQTLQHWGYRLTEADFKAYCKK 369 E R+ KG L F+DHPEF PN++PKEVL+AGSFGG YFRPI+SS+T + Y D HKE P DW +GLD+ + ++S YR ++NT+ VKCGGSLEMWESSGWI P DPYG FQWYCRF+ GRR+EDDARQI R+ + G GR+R NL+ ++VR G+RF D +VSPV+RQTLQHWGYRLTE D+K K+ Sbjct: 87 EVKRNKKGQLVFEDHPEFCPNMSPKEVLQAGSFGGTYFRPIYSSITKQHYKDVHKELPQDWLQGLDIHKQVSSAVYREEVNTFKVKCGGSLEMWESSGWIKPQDPYGWFQWYCRFYQGRRTEDDARQISRWAKCAGVKGRWRNNLITKVVRAGRRFADHSVSPVVRQTLQHWGYRLTEEDYKEGAKR 273
BLAST of EWM28015.1 vs. NCBI_GenBank
Match: gi|1191071113|ref|XP_020914241.1| (uncharacterized protein LOC110251832 [Exaiptasia pallida] >gi|999983597|gb|KXJ22738.1| hypothetical protein AC249_AIPGENE26038 [Exaiptasia pallida]) HSP 1 Score: 274.248 bits (700), Expect = 2.284e-87 Identity = 124/196 (63.27%), Postives = 149/196 (76.02%), Query Frame = 0 Query: 174 PKVFSERQQEPSRDSKGVLHFKDHPEFLPNLTPKEVLRAGSFGGGYFRPIHSSVTGEDYSDAHKEFPSDWFEGLDMKRMITSKTYRPDINTYGVKCGGSLEMWESSGWITPVDPYGAFQWYCRFFLGRRSEDDARQIGRFNQVMGPTGRFRTNLMNQIVRKGKRFDDVNVSPVIRQTLQHWGYRLTEADFKAYCKK 369 PKV +QQE RD G + F D+P+F PNLTPKEVL+AGSFGG YFRPI SS+TGE Y+ KEFPSDWF+GL + R + S Y D+NTY VKCGGSLEMWESSGWI DPYG FQWYCRFFLGRRS+DD+RQ+GR+ + G GR+R NL+ ++VR G +D+ VSPV+RQTLQHW YRLT+ D+ Y KK Sbjct: 70 PKV--PKQQEIKRDKHGKIIFADYPDFKPNLTPKEVLQAGSFGGTYFRPIKSSITGEKYAAVWKEFPSDWFDGLSIPRQVVSSVYHTDVNTYKVKCGGSLEMWESSGWIVKQDPYGWFQWYCRFFLGRRSDDDSRQVGRWLRCAGDKGRWRNNLITKVVRSGCGYDNAGVSPVVRQTLQHWAYRLTKEDYDKYAKK 263
BLAST of EWM28015.1 vs. NCBI_GenBank
Match: gi|1049273987|ref|XP_017577372.1| (PREDICTED: uncharacterized protein LOC108442045 [Pygocentrus nattereri]) HSP 1 Score: 273.863 bits (699), Expect = 6.300e-87 Identity = 117/187 (62.57%), Postives = 146/187 (78.07%), Query Frame = 0 Query: 183 EPSRDSKGVLHFKDHPEFLPNLTPKEVLRAGSFGGGYFRPIHSSVTGEDYSDAHKEFPSDWFEGLDMKRMITSKTYRPDINTYGVKCGGSLEMWESSGWITPVDPYGAFQWYCRFFLGRRSEDDARQIGRFNQVMGPTGRFRTNLMNQIVRKGKRFDDVNVSPVIRQTLQHWGYRLTEADFKAYCKK 369 E R+ KG L F+DHPEF PN++PKEVL+AGSFGG YFRPI+SS+T + Y D KE P DW +GL++ + ++S TY ++NTY VKCGGSLEMWESSGWI P DPYG FQWYCRF+ GRR+EDD RQI R+ G GR+R NL+ ++VR G+RFDD +VSPV+RQTLQHWGYRLTE D++ K+ Sbjct: 99 EVKRNKKGQLVFEDHPEFQPNMSPKEVLQAGSFGGTYFRPIYSSITKQHYKDLWKELPQDWLQGLNVPKQVSSATYNEEVNTYKVKCGGSLEMWESSGWIKPQDPYGWFQWYCRFYEGRRTEDDVRQISRWANCAGVKGRWRNNLITKVVRSGQRFDDRSVSPVVRQTLQHWGYRLTEEDYREGAKR 285
BLAST of EWM28015.1 vs. NCBI_GenBank
Match: gi|1005423672|ref|XP_015772703.1| (PREDICTED: uncharacterized protein LOC107350951 [Acropora digitifera]) HSP 1 Score: 269.24 bits (687), Expect = 6.374e-86 Identity = 120/187 (64.17%), Postives = 147/187 (78.61%), Query Frame = 0 Query: 184 PSRDSKGVLHFKDHPEFLPNLTPKEVLRAGSFGGGYFRPIHSSVTGEDYS-DAHKEFPSDWFEGLDMKRMITSKTYRPDINTYGVKCGGSLEMWESSGWITPVDPYGAFQWYCRFFLGRRSEDDARQIGRFNQVMGPTGRFRTNLMNQIVRKGKRFDDVNVSPVIRQTLQHWGYRLTEADFKAYCKK 369 P RD G L F D P+F PN+TPKEVL+AGSFGG YFRPI+SS+TG+ YS D +KEFP+DWF+GL++K +TS YR ++NTY VKCGGSLEMWESSGWI DPYG F WYCRFFLGRR+EDD+RQ+ R+ + G GR+R NL+ ++VR G +D+ VSPV+RQTLQHWGYRLT+ DF Y KK Sbjct: 49 PKRDKHGKLVFTDFPDFKPNMTPKEVLQAGSFGGTYFRPIYSSITGKKYSADVYKEFPADWFQGLNIKTQVTSSVYRNEVNTYKVKCGGSLEMWESSGWIHKQDPYGWFHWYCRFFLGRRTEDDSRQVDRWKKCAGDKGRWRNNLITKVVRSGCAYDNFGVSPVVRQTLQHWGYRLTKKDFDTYAKK 235
BLAST of EWM28015.1 vs. NCBI_GenBank
Match: gi|62955751|ref|NP_001017892.1| (uncharacterized protein LOC550591 [Danio rerio] >gi|62204714|gb|AAH93435.1| Zgc:113208 [Danio rerio]) HSP 1 Score: 269.626 bits (688), Expect = 2.076e-85 Identity = 117/189 (61.90%), Postives = 146/189 (77.25%), Query Frame = 0 Query: 181 QQEPSRDSKGVLHFKDHPEFLPNLTPKEVLRAGSFGGGYFRPIHSSVTGEDYSDAHKEFPSDWFEGLDMKRMITSKTYRPDINTYGVKCGGSLEMWESSGWITPVDPYGAFQWYCRFFLGRRSEDDARQIGRFNQVMGPTGRFRTNLMNQIVRKGKRFDDVNVSPVIRQTLQHWGYRLTEADFKAYCKK 369 +++ R+ KG L FKDHPEF PN+TPKEVL+AGSFGG YFRPI+SS+T + Y D KE P DW +GL++ + S TYR +NTY VKCGGSLEMWESSGWI P DPYG FQWYCRF+ GRR+EDDARQI R+++ G GR+R NL+ ++VR G +D+V VSPV+RQTLQHWGY+LT D+K K+ Sbjct: 93 KKQIKRNEKGQLLFKDHPEFTPNMTPKEVLQAGSFGGTYFRPIYSSITKKHYKDVWKELPEDWLDGLNIPEQVASSTYREKVNTYKVKCGGSLEMWESSGWIVPQDPYGWFQWYCRFYQGRRTEDDARQISRWSKCAGVKGRWRNNLITKVVRSGCAYDNVTVSPVVRQTLQHWGYKLTPEDYKQGAKR 281
BLAST of EWM28015.1 vs. NCBI_GenBank
Match: gi|1101657533|ref|XP_018953539.1| (PREDICTED: uncharacterized protein LOC109083162 [Cyprinus carpio]) HSP 1 Score: 267.314 bits (682), Expect = 2.352e-84 Identity = 116/187 (62.03%), Postives = 144/187 (77.01%), Query Frame = 0 Query: 183 EPSRDSKGVLHFKDHPEFLPNLTPKEVLRAGSFGGGYFRPIHSSVTGEDYSDAHKEFPSDWFEGLDMKRMITSKTYRPDINTYGVKCGGSLEMWESSGWITPVDPYGAFQWYCRFFLGRRSEDDARQIGRFNQVMGPTGRFRTNLMNQIVRKGKRFDDVNVSPVIRQTLQHWGYRLTEADFKAYCKK 369 E R+ KG L FKDHPEF PNLTPKEVL+AGSFGG YFRPI+SS+T + Y D +E P DW +GL++ + + S TYR ++N Y VKCGGSLEMWESSGWI P DPYG FQWYCRF+ GRR+EDDARQI R+ + G GR+R NL+ ++VR G +D+ +VSPV+RQTLQHWGY+LT D+K K+ Sbjct: 107 EIKRNEKGQLVFKDHPEFTPNLTPKEVLQAGSFGGTYFRPIYSSITKQHYKDVWQELPEDWLDGLNISKQVASSTYRENVNIYNVKCGGSLEMWESSGWIVPQDPYGWFQWYCRFYHGRRTEDDARQISRWAKCAGVKGRWRQNLITKVVRSGCAYDNPSVSPVVRQTLQHWGYKLTLEDYKEGAKR 293 The following BLAST results are available for this feature:
BLAST of EWM28015.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10 Position : 0 Zoom : x 1
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|