EWM27998.1, cds2631 (CDS) Nannochloropsis gaditana

Overview
NameEWM27998.1
Unique Namecds2631
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002459.1:862004..863668 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM27998.1
Productdihydrolipoamide s-acetyltransferase (e2 component of pyruvate dehydrogenase complex)
Orig transcript idgnl|cribi|Naga_100008g2.7890.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:862004..863668 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
GO:0016746transferase activity, transferring acyl groups
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR011053Single_hybrid_motif
IPR0030162-oxoA_DH_lipoyl-BS
IPR0010782-oxoacid_DH_actylTfrase
IPR000089Biotin_lipoyl
IPR023213CAT-like_dom
IPR004167E3-bd
Homology
BLAST of EWM27998.1 vs. NCBI_GenBank
Match: gi|585110339|gb|EWM27998.1| (dihydrolipoamide s-acetyltransferase (e2 component of pyruvate dehydrogenase complex) [Nannochloropsis gaditana])

HSP 1 Score: 1105.51 bits (2858), Expect = 0.000e+0
Identity = 554/554 (100.00%), Postives = 554/554 (100.00%), Query Frame = 0
Query:    1 MTWLGKSRRVVHLCLFPNGLRAGTGKSRSSLGRLLEHGPLPASPVFPHGRRSISCGKRSNRISTFPQVSRLACFQPGAAPLSSPQRLFSSLPPHQVVGLPALSPTMEHGTIASWTKKEGDSFGPGDVICEIETDKAVVSFDAQDEGILAKILVQPSAGEVRVGQPIMVTVEDAANVAAFANFSPDAAEPAPPKAAAPSPAASTPAPSTPSPPPSPPSSPPTSAAAGVSLLGYPGRVFASPLAKTLAGQLGHDLRAIPGTGPNGRVLAADVREYVPPVVAERPTETIPAEAVRASAPAHASTVEKVAGAPIHGAGFTDYRVSEAGRGVAARLTVAKQTVPHYYLTVDLELDKLLSLRETLNKELGEKEMGLSVNDFLLKAAALASKKVPEANASWHGDFVRQYHAVDVNLVLGVGDGLLAPVIRNVDSKGLRALSAEVAGLVGGAERGELSEEALQTGTFTLINVGMYGVKAVAPIVSLPQACVLGVGAIENRVVPAAAPLKGEAAGEGEGEVYRVVPGVTVTLSCDHRVIDGAVGAQWLSAFKSLVEEPMTLLL 554
            MTWLGKSRRVVHLCLFPNGLRAGTGKSRSSLGRLLEHGPLPASPVFPHGRRSISCGKRSNRISTFPQVSRLACFQPGAAPLSSPQRLFSSLPPHQVVGLPALSPTMEHGTIASWTKKEGDSFGPGDVICEIETDKAVVSFDAQDEGILAKILVQPSAGEVRVGQPIMVTVEDAANVAAFANFSPDAAEPAPPKAAAPSPAASTPAPSTPSPPPSPPSSPPTSAAAGVSLLGYPGRVFASPLAKTLAGQLGHDLRAIPGTGPNGRVLAADVREYVPPVVAERPTETIPAEAVRASAPAHASTVEKVAGAPIHGAGFTDYRVSEAGRGVAARLTVAKQTVPHYYLTVDLELDKLLSLRETLNKELGEKEMGLSVNDFLLKAAALASKKVPEANASWHGDFVRQYHAVDVNLVLGVGDGLLAPVIRNVDSKGLRALSAEVAGLVGGAERGELSEEALQTGTFTLINVGMYGVKAVAPIVSLPQACVLGVGAIENRVVPAAAPLKGEAAGEGEGEVYRVVPGVTVTLSCDHRVIDGAVGAQWLSAFKSLVEEPMTLLL
Sbjct:    1 MTWLGKSRRVVHLCLFPNGLRAGTGKSRSSLGRLLEHGPLPASPVFPHGRRSISCGKRSNRISTFPQVSRLACFQPGAAPLSSPQRLFSSLPPHQVVGLPALSPTMEHGTIASWTKKEGDSFGPGDVICEIETDKAVVSFDAQDEGILAKILVQPSAGEVRVGQPIMVTVEDAANVAAFANFSPDAAEPAPPKAAAPSPAASTPAPSTPSPPPSPPSSPPTSAAAGVSLLGYPGRVFASPLAKTLAGQLGHDLRAIPGTGPNGRVLAADVREYVPPVVAERPTETIPAEAVRASAPAHASTVEKVAGAPIHGAGFTDYRVSEAGRGVAARLTVAKQTVPHYYLTVDLELDKLLSLRETLNKELGEKEMGLSVNDFLLKAAALASKKVPEANASWHGDFVRQYHAVDVNLVLGVGDGLLAPVIRNVDSKGLRALSAEVAGLVGGAERGELSEEALQTGTFTLINVGMYGVKAVAPIVSLPQACVLGVGAIENRVVPAAAPLKGEAAGEGEGEVYRVVPGVTVTLSCDHRVIDGAVGAQWLSAFKSLVEEPMTLLL 554          
BLAST of EWM27998.1 vs. NCBI_GenBank
Match: gi|553181946|ref|XP_005853650.1| (pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase) [Nannochloropsis gaditana CCMP526] >gi|422295409|gb|EKU22708.1| pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase) [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 888.641 bits (2295), Expect = 0.000e+0
Identity = 449/449 (100.00%), Postives = 449/449 (100.00%), Query Frame = 0
Query:  106 MEHGTIASWTKKEGDSFGPGDVICEIETDKAVVSFDAQDEGILAKILVQPSAGEVRVGQPIMVTVEDAANVAAFANFSPDAAEPAPPKAAAPSPAASTPAPSTPSPPPSPPSSPPTSAAAGVSLLGYPGRVFASPLAKTLAGQLGHDLRAIPGTGPNGRVLAADVREYVPPVVAERPTETIPAEAVRASAPAHASTVEKVAGAPIHGAGFTDYRVSEAGRGVAARLTVAKQTVPHYYLTVDLELDKLLSLRETLNKELGEKEMGLSVNDFLLKAAALASKKVPEANASWHGDFVRQYHAVDVNLVLGVGDGLLAPVIRNVDSKGLRALSAEVAGLVGGAERGELSEEALQTGTFTLINVGMYGVKAVAPIVSLPQACVLGVGAIENRVVPAAAPLKGEAAGEGEGEVYRVVPGVTVTLSCDHRVIDGAVGAQWLSAFKSLVEEPMTLLL 554
            MEHGTIASWTKKEGDSFGPGDVICEIETDKAVVSFDAQDEGILAKILVQPSAGEVRVGQPIMVTVEDAANVAAFANFSPDAAEPAPPKAAAPSPAASTPAPSTPSPPPSPPSSPPTSAAAGVSLLGYPGRVFASPLAKTLAGQLGHDLRAIPGTGPNGRVLAADVREYVPPVVAERPTETIPAEAVRASAPAHASTVEKVAGAPIHGAGFTDYRVSEAGRGVAARLTVAKQTVPHYYLTVDLELDKLLSLRETLNKELGEKEMGLSVNDFLLKAAALASKKVPEANASWHGDFVRQYHAVDVNLVLGVGDGLLAPVIRNVDSKGLRALSAEVAGLVGGAERGELSEEALQTGTFTLINVGMYGVKAVAPIVSLPQACVLGVGAIENRVVPAAAPLKGEAAGEGEGEVYRVVPGVTVTLSCDHRVIDGAVGAQWLSAFKSLVEEPMTLLL
Sbjct:    1 MEHGTIASWTKKEGDSFGPGDVICEIETDKAVVSFDAQDEGILAKILVQPSAGEVRVGQPIMVTVEDAANVAAFANFSPDAAEPAPPKAAAPSPAASTPAPSTPSPPPSPPSSPPTSAAAGVSLLGYPGRVFASPLAKTLAGQLGHDLRAIPGTGPNGRVLAADVREYVPPVVAERPTETIPAEAVRASAPAHASTVEKVAGAPIHGAGFTDYRVSEAGRGVAARLTVAKQTVPHYYLTVDLELDKLLSLRETLNKELGEKEMGLSVNDFLLKAAALASKKVPEANASWHGDFVRQYHAVDVNLVLGVGDGLLAPVIRNVDSKGLRALSAEVAGLVGGAERGELSEEALQTGTFTLINVGMYGVKAVAPIVSLPQACVLGVGAIENRVVPAAAPLKGEAAGEGEGEVYRVVPGVTVTLSCDHRVIDGAVGAQWLSAFKSLVEEPMTLLL 449          
BLAST of EWM27998.1 vs. NCBI_GenBank
Match: gi|219110817|ref|XP_002177160.1| (dihydrolipoamide acetyltransferase [Phaeodactylum tricornutum CCAP 1055/1] >gi|217411695|gb|EEC51623.1| dihydrolipoamide acetyltransferase [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 431.795 bits (1109), Expect = 2.988e-143
Identity = 234/473 (49.47%), Postives = 310/473 (65.54%), Query Frame = 0
Query:   84 PQRLFSSLPPHQVVGLPALSPTMEHGTIASWTKKEGDSFGPGDVICEIETDKAVVSFDAQDEGILAKILVQPSAGEVRVGQPIMVTVEDAANVAAFANFSPDAAEPAPPKAAAPSPAASTPAPSTPSPPPSPPSSPPTSAAAGVSLLGYPGRVFASPLAKTLAGQLGHDLRAIPGTGPNGRVLAADVREYVPPVVAERPTETI--PAEAVRASAPAHASTVEKVAGAPIHGAGFTDYRVSEAGRGVAARLTVAKQTVPHYYLTVDLELDKLLSLRETLNKELGEKEMGLSVNDFLLKAAALASKKVPEANASWHGDFVRQYHAVDVNLVLGVGDGLLAPVIRNVDSKGLRALSAEVAGLVGGAERGELSEEALQTGTFTLINVGMYGVKAVAPIVSLPQACVLGVGAIENRVVPAAAPLKGEAAGEGEGEVYRVVPGVTVTLSCDHRVIDGAVGAQWLSAFKSLVEEPMTLLL 554
            P R FSS PPH++VGLP+LSPTME G+IA+W  KEG+SF  GD+ C +ETDKA V F+AQD+G+LAKIL Q    E++ G PIM+T+ED A++ AFA+++ D+   + P  A  +P  +   PS  S P     +P  + +A     G   R+ ASPLA  LA ++G+++  IPGTGPNGR++AADV+EY P  V +  T     PA+A   S+PA           P+ G+G+TDY +SE+ R VAARL  AK+ VPHYYLTVD+ +D+LL +R TLN  L E    L V + LLKAAAL+ K VP ANASW    VR Y +VD+N+V+G GD L+ PVI+N  SKGL+A+S E+   V   E  + +      GTFT++N+GMYGVK+ API+  PQAC L +GA+E R+VP   P       + E ++Y+     T TLSCDHRV+DGAVGAQWL AFKS V+ P TLLL
Sbjct:   42 PVRFFSSYPPHELVGLPSLSPTMESGSIAAWNLKEGESFIAGDIFCSVETDKATVDFEAQDDGVLAKILAQAGPDEIKCGDPIMITIEDEAHLGAFADYTLDSGTESSPPVADAAPTPTASPPSPKSSPAENKGTPDGTTSATSPDTG--DRIVASPLAHMLAKEMGYNISKIPGTGPNGRIIAADVKEYTPGAVEDADTVDTPAPAQAAMKSSPAQ----------PVSGSGYTDYPLSESAREVAARLAQAKRNVPHYYLTVDIAVDELLKIRSTLNATLDES-AALGVYELLLKAAALSMKAVPSANASWMDSVVRVYDSVDINVVVGSGDSLVTPVIQNCSSKGLKAISEELGSAVKALEEDDDAPIG-GLGTFTVMNLGMYGVKSCAPIIREPQACALAIGALETRIVPNDDP-------DAE-DIYKESVMFTATLSCDHRVVDGAVGAQWLQAFKSHVQNPTTLLL 492          
BLAST of EWM27998.1 vs. NCBI_GenBank
Match: gi|1173957008|gb|OQS03645.1| (dihydrolipoamide acetyltransferase [Thraustotheca clavata])

HSP 1 Score: 411.379 bits (1056), Expect = 5.013e-134
Identity = 229/479 (47.81%), Postives = 306/479 (63.88%), Query Frame = 0
Query:   86 RLFSSLPPHQVVGLPALSPTMEHGTIASWTKKEGDSFGPGDVICEIETDKAVVSFDAQDEGILAKILVQPSAGEVRVGQPIMVTVEDAANVAAFANFSPDAAEPAPPKAAAPSPAASTPAPSTPSPPPSPP--SSPPTSAAAGVSLLGYPGRVFASPLAKTLAGQLGHDLRAIPGTGPNGRVLAADVREYVPPVVAERPTETIPAEAVRASAPAHASTVEKVAG------APIHGAGFTDYRVSEAGRGVAARLTVAKQTVPHYYLTVDLELDKLLSLRETLNKELGEKEMGLSVNDFLLKAAALASKKVPEANASWHGDFVRQYHAVDVNLVLGVGDGLLAPVIRNVDSKGLRALSAEVAGLVGGA--ERGELSEEALQTGTFTLINVGMYGVKAVAPIVSLPQACVLGVGAIENRVVPAAAPLKGEAAGEGEGEVYRVVPGVTVTLSCDHRVIDGAVGAQWLSAFKSLVEEPMTLLL 554
            R  SSLP H+VVGLPALSPTME GTI++W KKEGD    GDVIC++ETDKAVV F+AQD+  LAKIL    + +++VG+PI VTV+D  +VA   NF+ DA+  + P A AP    STP    P+ P +P   ++P  +A + +S      R+ ASPLAK +A + G  L  + G+GP GR++ ADV E +  V                S PA A  VE VA       API    FTD+ +S   +  AA+LT  K  VPHY+LT+D+ LDKLLS R+ LNK  GE +  LSVNDF+L+AAAL  KKVP AN++W G FVRQ+H  ++++++ V  G++APV+R ++ KGL  ++A+V  LV     E  +LS+   + GTFT+ NVGMY VK++A IVS  QAC LG+G I  RVVP   P   EA      ++Y+    +T TL+CDHRVIDGA GAQWLS+FK LVE+P+ ++L
Sbjct:  141 RSMSSLPSHEVVGLPALSPTMEMGTISAWLKKEGDKINAGDVICQVETDKAVVDFEAQDDSYLAKILKPAGSADIKVGEPIFVTVDDQDSVAQLVNFTFDASATSTP-ATAP----STPVEQAPATPVAPAHVATPVAAATSTIS-----DRIVASPLAKKIARESGVQLAGVSGSGPLGRIIRADVEEALTRV---------------QSQPAAAQAVEPVAAAQGLAPAPIVHGDFTDFPLSAKAQAFAAQLTQQKLDVPHYHLTIDVTLDKLLSARDLLNKTRGENDQ-LSVNDFILRAAALTMKKVPAANSAWMGTFVRQFHNCNISMMMSVEGGVVAPVLREINLKGLDGVNADVRALVEKVQNENSDLSDNDFEGGTFTISNVGMYDVKSLAAIVSPNQACSLGLGVISKRVVPNDDP---EAT-----QIYKYATQMTATLACDHRVIDGATGAQWLSSFKELVEDPLRMIL 585          
BLAST of EWM27998.1 vs. NCBI_GenBank
Match: gi|1210525500|dbj|GAX15569.1| (pyruvate dehydrogenase E2 component [Fistulifera solaris])

HSP 1 Score: 404.06 bits (1037), Expect = 8.620e-133
Identity = 241/471 (51.17%), Postives = 308/471 (65.39%), Query Frame = 0
Query:   86 RLFSSLPPHQVVGLPALSPTMEHGTIASWTKKEGDSFGPGDVICEIETDKAVVSFDAQDEGILAKILVQPSAGEVRVGQPIMVTVEDAANVAAFANFSPDAAEPAPPKAAAPSPAASTPAPSTPSPPPSPPSSPPTSAAAGVSLLGYPGRVFASPLAKTLAGQLGHDLRAIPGTGPNGRVLAADVREYVPPVVAERPTETIPAEAVRASAPAHASTVEKVAGAPIHGAGFTDYRVSEAGRGVAARLTVAKQTVPHYYLTVDLELDKLLSLRETLNKELGEKEMGLSVNDFLLKAAALASKKVPEANASWHGDFVRQYHAVDVNLVLGVGDGLLAPVIRNVDSKGLRALSAEVAGLVGGAERGELSEEALQT--GTFTLINVGMYGVKAVAPIVSLPQACVLGVGAIENRVVPAAAPLKGEAAGEGEGEVYRVVPGVTVTLSCDHRVIDGAVGAQWLSAFKSLVEEPMTLLL 554
            R FSSLP H VVGLP+LSPTME G+IASW  KEGDSF  GDV C +ETDKA V F+AQD+G+LAKILVQ   G+++VG+PIMVTV+ A +VAAF  FS D    APP A++  P       ++P+   +    PPT AA   +L     R+ ASP A  +A +LG+DL AIPGTGP GR+LAADV E+VP       T   P EA  A A A A+        P  G GFTDY +S+A + VAARL  +K+ VPHYYLTVD+  D+LL LR++    LG  E+G  V + L+KAAAL+ + VP  NA+W GDFVR Y AVD+N+V+G GD L  PV+R+V  +GL+A++ E+A  V   +    +   L    GTFT +N+GMYG+KA API+  PQAC L VGA+E R+VP+  P            +Y+    +T TLSCDHRV+DGAVGAQWL+AFK  +E P+TLLL
Sbjct:   29 RPFSSLPSHHVVGLPSLSPTMESGSIASWNLKEGDSFAAGDVFCSVETDKATVDFEAQDDGVLAKILVQAGGGDIKVGEPIMVTVDSADDVAAFQTFSLDTTSAAPPAASSAPPLPPAAPVASPT---AVTPPPPTPAAVPAALSANGDRIVASPKAYKVAKELGYDLAAIPGTGPGGRILAADVHEFVPSAAVAAVTAP-PTEAPGAVAVATAT--------PTLGDGFTDYPLSDASKEVAARLAQSKRNVPHYYLTVDINCDELLKLRDS----LGMPEIG--VYELLIKAAALSMQAVPTVNAAWMGDFVRVYDAVDMNVVVGSGDELYTPVLRDVGRRGLKAIAKELATAVSALDPNAEAIAPLTNGVGTFTFLNLGMYGIKACAPIIREPQACALAVGALETRIVPSNDP----------DTIYQESEVLTATLSCDHRVVDGAVGAQWLAAFKGHIENPVTLLL 471          
BLAST of EWM27998.1 vs. NCBI_GenBank
Match: gi|1072228718|gb|OEU13453.1| (2-oxoacid_dh-domain-containing protein [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 391.349 bits (1004), Expect = 1.952e-128
Identity = 219/453 (48.34%), Postives = 295/453 (65.12%), Query Frame = 0
Query:  106 MEHGTIASWTKKEGDSFGPGDVICEIETDKAVVSFDAQDEGILAKILVQPSAGEVRVGQPIMVTVEDAANVAAFANFSPDAAEPAPPKAAAPSPAASTPAPSTPSPPPSPPSSPPTSAAAGVSLLGYPGRVFASPLAKTLAGQLGHDLRAIPGTGPNGRVLAADVREYVPPVVAERPTETI----PAEAVRASAPAHASTVEKVAGAPIHGAGFTDYRVSEAGRGVAARLTVAKQTVPHYYLTVDLELDKLLSLRETLNKELGEKEMGLSVNDFLLKAAALASKKVPEANASWHGDFVRQYHAVDVNLVLGVGDGLLAPVIRNVDSKGLRALSAEVAGLVGGAERGELSEEALQTGTFTLINVGMYGVKAVAPIVSLPQACVLGVGAIENRVVPAAAPLKGEAAGEGEGEVYRVVPGVTVTLSCDHRVIDGAVGAQWLSAFKSLVEEPMTLLL 554
            ME GTI SW  +EGDSFGPGDVIC IETDKA V F+AQD+G++A+IL +  A E+ VG PIM+TVE+ A+ AAF ++     E + P  AA + A +   P   +PP   P++    + AG       GRV ASPLA  ++  +G+D+ AIPG+GP GR++AADVR+Y+P   A   +  I    PA+AV A+A            +PI GAGFTDY +S++ R V+ARL  +K+ VPHYYLTVD+ +D +L LR+ L+  +GE+E GL   +F++KAAA + + VP ANASW    +R Y +VD+N+V+G GD L  P+IRN  SKGL+A+S E+   V   E GE S E    GTFT++N+GMYGVK+ API+  PQAC L +GA+ENR+VP   P           E+Y+    +T T+S DHRV+DGA GA WLSAFK+ +E P TLLL
Sbjct:    1 METGTIGSWNMEEGDSFGPGDVICSIETDKATVDFEAQDDGVIARILKEAGADEIEVGVPIMITVEEEADAAAFKDY---VVEDSAPAPAAAAAAPTETPPPAAAPPAPVPAAVAVPSPAG-------GRVVASPLAHMISNDMGYDISAIPGSGPGGRIIAADVRDYIPSAAAAAVSTGIDAPAPAQAVMATA------------SPIAGAGFTDYPISDSHREVSARLAQSKRNVPHYYLTVDICMDAVLKLRKELSGAVGEEE-GLGAYEFIIKAAAKSMQAVPAANASWMDSAIRVYDSVDMNVVVGSGDKLYTPLIRNCGSKGLKAISDELNTAVSAVETGEFSSEFASVGTFTIMNLGMYGVKSCAPIIREPQACALALGAMENRIVPNDDP--------DSEEIYKESVVMTATMSLDHRVVDGAAGAPWLSAFKNYLESPTTLLL 422          
BLAST of EWM27998.1 vs. NCBI_GenBank
Match: gi|1173954087|gb|OQS01580.1| (dihydrolipoamide acetyltransferase [Achlya hypogyna])

HSP 1 Score: 384.8 bits (987), Expect = 2.696e-125
Identity = 229/480 (47.71%), Postives = 303/480 (63.12%), Query Frame = 0
Query:   77 GAAPLSSPQRLFSSLPPHQVVGLPALSPTMEHGTIASWTKKEGDSFGPGDVICEIETDKAVVSFDAQDEGILAKILVQPSAGEVRVGQPIMVTVEDAANVAAFANFSPDAAEPAPPKAAAPSPAASTPAPSTPSPPPSPPSSPPTSAAAGVSLLGYPGRVFASPLAKTLAGQLGHDLRAIPGTGPNGRVLAADVREYVPPVVAERPTETIPAEAVRASAPAHASTVEKVAGAPIHGAGFTDYRVSEAGRGVAARLTVAKQTVPHYYLTVDLELDKLLSLRETLNKELGEKEMGLSVNDFLLKAAALASKKVPEANASWHGDFVRQYHAVDVNLVLGVGDGLLAPVIRNVDSKGLRALSAEVAGLVGGA--ERGELSEEALQTGTFTLINVGMYGVKAVAPIVSLPQACVLGVGAIENRVVPAAAPLKGEAAGEGEGEVYRVVPGVTVTLSCDHRVIDGAVGAQWLSAFKSLVEEPMTLLL 554
            GA P S+  R FSSLP H+VVGLPALSPTME GTI++W KKEGD    GDVIC++ETDKAVV F+AQD+  LAKIL      +++VG+PI VTV+DA++VAA A FS +AA PA    AA   AA   A   P       +    + A         GRV ASPLAK +A + G  L  + G+GP GR++ ADV E +  V ++         A   +A   A  V        HG  +TD  +S   +  AA+LT  K  VPHY+LT+D+ LDKLL+ RE LNK   E E  LSVNDF+L+AAAL  KKVP AN++W G FVRQ+H V++++++ V  G++APV+RN +  GL  ++A+V  LV     E  +L+++  + GTFT+ NVGMY VK++A IVS  QAC LG+GAI  RVVP   P   EA      ++Y+    +T TL+CDHRVIDGA GAQWL++FK LVE+P+ ++L
Sbjct:   15 GARP-SALARAFSSLPEHEVVGLPALSPTMEMGTISAWLKKEGDKINAGDVICQVETDKAVVDFEAQDDSYLAKILKPEGTADIKVGEPIFVTVDDASSVAALATFSINAATPAAAAPAAAPIAAPVAATPAPVSAAPAAAPAANTIA---------GRVVASPLAKKIARESGVSLAGVSGSGPLGRIIRADVEEALARVQSQPAASAAVPAAAAPAASTAAPVV--------HG-DYTDLPLSAKAQAFAAQLTQQKLDVPHYHLTIDVTLDKLLAARELLNKSRAESEQ-LSVNDFILRAAALTMKKVPAANSAWMGTFVRQFHNVNISMMMSVDGGVVAPVLRNTNLHGLDGINADVRTLVEKVTNENSDLADDDFEGGTFTISNVGMYDVKSLAAIVSPNQACSLGLGAIAKRVVPNDDP---EAT-----QIYKFATQMTATLACDHRVIDGATGAQWLASFKELVEDPLRMIL 466          
BLAST of EWM27998.1 vs. NCBI_GenBank
Match: gi|1210522047|dbj|GAX19100.1| (pyruvate dehydrogenase E2 component [Fistulifera solaris])

HSP 1 Score: 382.874 bits (982), Expect = 4.054e-125
Identity = 223/460 (48.48%), Postives = 288/460 (62.61%), Query Frame = 0
Query:  106 MEHGTIASWTKKEGDSFGPGDVICEIETDKAVVSFDAQDEGILAKILVQPSAGEVRVGQPIMVTVEDAANVAAFANFSPDAAEPAPPKAAA---------PSPAASTPAPSTPSPPPSPPSSPPTSAAAGVSLLGYPGRVFASPLAKTLAGQLGHDLRAIPGTGPNGRVLAADVREYVPPVVAERPTETIPAEAVRASAPAHASTVEKVAGAPIHGAGFTDYRVSEAGRGVAARLTVAKQTVPHYYLTVDLELDKLLSLRETLNKELGEKEMGLSVNDFLLKAAALASKKVPEANASWHGDFVRQYHAVDVNLVLGVGDGLLAPVIRNVDSKGLRALSAEVAGLVGGAERGELSEEALQT--GTFTLINVGMYGVKAVAPIVSLPQACVLGVGAIENRVVPAAAPLKGEAAGEGEGEVYRVVPGVTVTLSCDHRVIDGAVGAQWLSAFKSLVEEPMTLLL 554
            ME G+IASW  KEGD F  GDV C +ETDKA V F+AQD+G+LAKILVQ   G+++VG+PIMVTV+ A +VAAF  FS    + A P AA+          SP A TP PSTP+   + PS+                R+ ASP A  +A +LG+DL AIPGTGP GR+LAADV E+VP       T   P EA  A A A A+        P  G GFTDY +S++ + VAARL  +K+ VPHYYLTVD+  D+LL LR++    LG  E+G  V + L+K+AAL+ + VP  NA+W GDFVR Y AVD+N+V+G GD L  PV+ +V   GL+A+S E+A  V   +    +   +    GTFT +N+GMYG+KA API+  PQAC L VGA+E R+VP+  P            +Y+    +T TLSCDHRV+DGAVGAQWL+AFK  +E P+TLLL
Sbjct:    1 MESGSIASWNLKEGDLFAAGDVFCSVETDKATVDFEAQDDGVLAKILVQAGGGDIKVGEPIMVTVDSADDVAAFQTFSLGTTKTATPPAASSAPLPAAPISSPTAVTPPPSTPAAVSAIPSA-------------RGDRIVASPKAYKVAKELGYDLAAIPGTGPGGRILAADVHEFVPSAAVAAETAP-PTEAPGAVAVATAT--------PTFGDGFTDYPLSDSSKEVAARLAQSKRNVPHYYLTVDINCDELLKLRDS----LGMPEIG--VYELLIKSAALSMQAVPTVNAAWMGDFVRVYDAVDMNVVVGNGDELYTPVLSDVGRLGLKAISKELATAVSALDPNSDAFAPITNGVGTFTFLNLGMYGIKACAPIIREPQACALAVGALETRIVPSNDP----------DTIYQESEVLTATLSCDHRVVDGAVGAQWLAAFKGHIENPVTLLL 422          
BLAST of EWM27998.1 vs. NCBI_GenBank
Match: gi|669158496|ref|XP_008614810.1| (hypothetical protein SDRG_10592 [Saprolegnia diclina VS20] >gi|530733561|gb|EQC31803.1| hypothetical protein SDRG_10592 [Saprolegnia diclina VS20])

HSP 1 Score: 380.178 bits (975), Expect = 1.628e-123
Identity = 219/471 (46.50%), Postives = 297/471 (63.06%), Query Frame = 0
Query:   86 RLFSSLPPHQVVGLPALSPTMEHGTIASWTKKEGDSFGPGDVICEIETDKAVVSFDAQDEGILAKILVQPSAGEVRVGQPIMVTVEDAANVAAFANFSPDAAEPAPPKAAAPSPAASTPAPSTPSPPPSPPSSPPTSAAAGVSLLGYPGRVFASPLAKTLAGQLGHDLRAIPGTGPNGRVLAADVREYVPPVVAERPTETIPAEAVRASAPAHASTVEKVAGAPIHGAGFTDYRVSEAGRGVAARLTVAKQTVPHYYLTVDLELDKLLSLRETLNKELGEKEMGLSVNDFLLKAAALASKKVPEANASWHGDFVRQYHAVDVNLVLGVGDGLLAPVIRNVDSKGLRALSAEVAGLVGGA--ERGELSEEALQTGTFTLINVGMYGVKAVAPIVSLPQACVLGVGAIENRVVPAAAPLKGEAAGEGEGEVYRVVPGVTVTLSCDHRVIDGAVGAQWLSAFKSLVEEPMTLLL 554
            R FSSLP H+VVGLPALSPTME GTI++W KKEGD    GDVIC++ETDKAVV F+AQD+  LAKIL      +++VG+PI VTV++A++VAA A F+  A       A A +   +    + P       +  P++ A         GR+ ASPLAK +A + G  L  + G+GP GR++ ADV E +                  A+AP  A+ V  VA   +HG  FTD  +S   +  AA+LT  K  VPHY+LT+D+ LDKLLS R+ LNK  GE E  LSVNDF+++AAAL  KK+P AN++W G FVRQ+H V++++++ V  G+LAPV+R+ + KGL  L+A+V  LV     E  +L+++  + GTFT+ NVGMY VKA+A IVS  QAC LG+G I  RVVP   P           ++Y+    +T TL+CDHRVIDGA GAQWL++FK LVE+P+ ++L
Sbjct:   23 RAFSSLPDHEVVGLPALSPTMEMGTISAWLKKEGDKISAGDVICQVETDKAVVDFEAQDDSYLAKILKPEGTADIKVGEPIFVTVDEASSVAALATFTVGANAAPAAPAPAAAAPVAAAPVAAPVAAAPVATPAPSTIA---------GRIVASPLAKKIARESGVTLAGVSGSGPLGRIIRADVEEALAR----------AQSQPAAAAPVAAAPVAAVAAPIVHG-DFTDVPLSAKAQAFAAQLTQQKLDVPHYHLTIDVTLDKLLSARDLLNKTRGETEQ-LSVNDFIVRAAALTMKKIPAANSAWMGTFVRQFHNVNISMMMSVDGGVLAPVLRDTNLKGLDGLNADVRDLVEKVTNEHSDLADDDFEGGTFTISNVGMYDVKALAAIVSPNQACSLGLGVISKRVVPNDDP--------DATQIYKFATQMTATLACDHRVIDGATGAQWLASFKELVEDPLRMIL 464          
BLAST of EWM27998.1 vs. NCBI_GenBank
Match: gi|698788026|ref|XP_009827045.1| (pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase [Aphanomyces astaci] >gi|574118134|gb|ETV83615.1| pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase [Aphanomyces astaci])

HSP 1 Score: 376.326 bits (965), Expect = 5.824e-122
Identity = 217/475 (45.68%), Postives = 286/475 (60.21%), Query Frame = 0
Query:   82 SSPQRLFSSLPPHQVVGLPALSPTMEHGTIASWTKKEGDSFGPGDVICEIETDKAVVSFDAQDEGILAKILVQPSAGEVRVGQPIMVTVEDAANVAAFANFSPDAAEPAPPKAAAPSPAASTPAPSTPSPPPSPPSSPPTSAAAGVSLLGYPGRVFASPLAKTLAGQLGHDLRAIPGTGPNGRVLAADVREYVPPVVAERPTETIPAEAVRASAPAHASTVEKVAGAPIHGAGFTDYRVSEAGRGVAARLTVAKQTVPHYYLTVDLELDKLLSLRETLNKELGEKEMGLSVNDFLLKAAALASKKVPEANASWHGDFVRQYHAVDVNLVLGVGDGLLAPVIRNVDSKGLRALSAEVAGLV--GGAERGELSEEALQTGTFTLINVGMYGVKAVAPIVSLPQACVLGVGAIENRVVPAAAPLKGEAAGEGEGEVYRVVPGVTVTLSCDHRVIDGAVGAQWLSAFKSLVEEPMTLLL 554
            SS  R FS+LP H+VVGLPALSPTME GTI++W KKEGD    GD++C+IETDKAVV F+AQD+  LAKIL    + +V+VG+PI VTVED + + AFA+FS     P        +P A+    +  +  P  P SP T A          GRV ASPLAK LA   G  L  + GTGP GR+L ADV   +               A    A A  +T       P+    +TD+ +++  +  AA+LT  K  VPHY+LT DL LDKLL  R+ LNK   E E  LSVNDF L+AAAL  KKVP ANA+W G  +RQ+H V +N+++    G++APV+R V+SKGL  ++AEV  ++  G       ++  L+TGTFT+ NVGM+ VK+ A IVS  Q+C LG+G I  RVVP   P           ++Y+    +T TL+ DHRVIDGA GAQWL++FK LVE+P+ ++L
Sbjct:   20 SSTARAFSTLPEHEVVGLPALSPTMETGTISTWLKKEGDKIAAGDIVCQIETDKAVVDFEAQDDSYLAKILKPEGSADVKVGEPIFVTVEDPSEIPAFASFSLSGVAPVAAAPTPAAPKATPAPVAASTAAPVVPVSPSTLA----------GRVIASPLAKKLARDTGVTLGGVSGTGPLGRILRADVESVLSAGPVAPAPAAAAIPAAAPVASAAPTT-------PLTHGDYTDFPLTDKAQHYAAQLTQQKLDVPHYHLTADLALDKLLVARDLLNKTRKEDEQ-LSVNDFFLRAAALTMKKVPAANAAWLGSVIRQFHNVHINVLVAAEGGVVAPVVRQVNSKGLDQVNAEVRAILAKGSEAAASWTDADLETGTFTISNVGMFDVKSFAGIVSPNQSCSLGLGTIAKRVVPNDDP--------NAEQIYKYSTQLTATLALDHRVIDGATGAQWLASFKELVEDPLRMIL 468          
The following BLAST results are available for this feature:
BLAST of EWM27998.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585110339|gb|EWM27998.1|0.000e+0100.00dihydrolipoamide s-acetyltransferase (e2 component... [more]
gi|553181946|ref|XP_005853650.1|0.000e+0100.00pyruvate dehydrogenase E2 component (dihydrolipoam... [more]
gi|219110817|ref|XP_002177160.1|2.988e-14349.47dihydrolipoamide acetyltransferase [Phaeodactylum ... [more]
gi|1173957008|gb|OQS03645.1|5.013e-13447.81dihydrolipoamide acetyltransferase [Thraustotheca ... [more]
gi|1210525500|dbj|GAX15569.1|8.620e-13351.17pyruvate dehydrogenase E2 component [Fistulifera s... [more]
gi|1072228718|gb|OEU13453.1|1.952e-12848.342-oxoacid_dh-domain-containing protein [Fragilario... [more]
gi|1173954087|gb|OQS01580.1|2.696e-12547.71dihydrolipoamide acetyltransferase [Achlya hypogyn... [more]
gi|1210522047|dbj|GAX19100.1|4.054e-12548.48pyruvate dehydrogenase E2 component [Fistulifera s... [more]
gi|669158496|ref|XP_008614810.1|1.628e-12346.50hypothetical protein SDRG_10592 [Saprolegnia dicli... [more]
gi|698788026|ref|XP_009827045.1|5.824e-12245.68pyruvate dehydrogenase complex dihydrolipoamide ac... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2639rna2639Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications