EWM30399.1, cds263 (CDS) Nannochloropsis gaditana

Overview
NameEWM30399.1
Unique Namecds263
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002455.1:664813..665095 +
Alignment locationCM002455.1:665255..665781 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM30399.1
ProductUncharacterized protein family UPF0317
Orig transcript idgnl|cribi|Naga_100026g53.10653.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:664813..665095 +
CM002455.1supercontigCM002455.1:665255..665781 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: INTERPRO
TermDefinition
IPR009906DUF1445
IPR016938UPF0317
Homology
BLAST of EWM30399.1 vs. NCBI_GenBank
Match: gi|585113059|gb|EWM30399.1| (Uncharacterized protein family UPF0317 [Nannochloropsis gaditana])

HSP 1 Score: 558.525 bits (1438), Expect = 0.000e+0
Identity = 269/269 (100.00%), Postives = 269/269 (100.00%), Query Frame = 0
Query:    1 MIMQTPNAFDTPAALRQKIRGGRHTGTTAGCCPGFVQANLVILPIEHALEFMTFCIRNPKPCPLLDITDPGSPHPPTWLANDGADVRTDLPMYRVWQNGKLLKEADDVTDYWRDDFVVFFLGCSFSFEEALVKANLSVRHLEEGKNVPMYKTNIPCRPAGPFQGNMVVSMRPYRPEQLGRVSEVTSRMKAVHGGPIHTGDPAAIGIIDLGQPDYGDAVSIASDEVPVFFACGVTPQNVILDCRLPGIAITHAPGAMFVTDVLNDFLTQN 269
            MIMQTPNAFDTPAALRQKIRGGRHTGTTAGCCPGFVQANLVILPIEHALEFMTFCIRNPKPCPLLDITDPGSPHPPTWLANDGADVRTDLPMYRVWQNGKLLKEADDVTDYWRDDFVVFFLGCSFSFEEALVKANLSVRHLEEGKNVPMYKTNIPCRPAGPFQGNMVVSMRPYRPEQLGRVSEVTSRMKAVHGGPIHTGDPAAIGIIDLGQPDYGDAVSIASDEVPVFFACGVTPQNVILDCRLPGIAITHAPGAMFVTDVLNDFLTQN
Sbjct:    1 MIMQTPNAFDTPAALRQKIRGGRHTGTTAGCCPGFVQANLVILPIEHALEFMTFCIRNPKPCPLLDITDPGSPHPPTWLANDGADVRTDLPMYRVWQNGKLLKEADDVTDYWRDDFVVFFLGCSFSFEEALVKANLSVRHLEEGKNVPMYKTNIPCRPAGPFQGNMVVSMRPYRPEQLGRVSEVTSRMKAVHGGPIHTGDPAAIGIIDLGQPDYGDAVSIASDEVPVFFACGVTPQNVILDCRLPGIAITHAPGAMFVTDVLNDFLTQN 269          
BLAST of EWM30399.1 vs. NCBI_GenBank
Match: gi|698778951|ref|XP_009822519.1| (hypothetical protein H257_01155 [Aphanomyces astaci] >gi|574122180|gb|ETV87656.1| hypothetical protein H257_01155 [Aphanomyces astaci])

HSP 1 Score: 311.612 bits (797), Expect = 6.307e-104
Identity = 152/264 (57.58%), Postives = 185/264 (70.08%), Query Frame = 0
Query:    3 MQTPNAFDTPAALRQKIRGGRHTGTTAGCCPGFVQANLVILPIEHALEFMTFCIRNPKPCPLLDITDPGSPHPPTWLANDGADVRTDLPMYRVWQNGKLLKEADDVTDYWRDDFVVFFLGCSFSFEEALVKANLSVRHLEEGKNVPMYKTNIPCRPAGPFQGNMVVSMRPYRPEQLGRVSEVTSRMKAVHGGPIHTGDPAAIGIIDLGQPDYGDAVSIASDEVPVFFACGVTPQNVILDCRLPGIAITHAPGAMFVTDVLNDFL 266
            M  P    TP   R + R G     +AG CPGF QANLVILP EHA +F+ FC RNPKPCPLL+++DPG      +  N  +D+RTDLP YRV+++G L +E  D+  YWRDD V F LGCSFSFE+AL  A LS+RH +EGKNVPMY+TN+PC PAG F GN+VVSMRP+ P+     S +T+R   VHG P+H GDP AIGI D+ QP YGDAV+I   E+PVF+ACGVTPQNV+L  + P  AITHAPG M +TD  ND L
Sbjct:    1 MTPPAKSLTPEQFRLRCRDGSFQSNSAGYCPGFAQANLVILPKEHAFDFLLFCQRNPKPCPLLEVSDPGCVDMRRFAPN--SDIRTDLPKYRVYKHGVLTEEVIDIKPYWRDDLVTFLLGCSFSFEDALQNAGLSIRHQDEGKNVPMYQTNLPCDPAGVFSGNLVVSMRPFSPKDAILASVITARYPNVHGSPVHVGDPQAIGIADISQPSYGDAVTIQPGEIPVFWACGVTPQNVLLASK-PAFAITHAPGHMLITDRRNDTL 261          
BLAST of EWM30399.1 vs. NCBI_GenBank
Match: gi|1004345260|ref|WP_061522805.1| (DUF1445 domain-containing protein [Bacillus nakamurai] >gi|1004086379|gb|KXZ15616.1| hypothetical protein AXI58_02470 [Bacillus nakamurai])

HSP 1 Score: 310.071 bits (793), Expect = 3.482e-103
Identity = 148/257 (57.59%), Postives = 188/257 (73.15%), Query Frame = 0
Query:   11 TPAALRQKIRGGRHTGTTAGCCPGFVQANLVILPIEHALEFMTFCIRNPKPCPLLDITDPGSPHPPTWLANDGADVRTDLPMYRVWQNGKLLKEADDVTDYWRDDFVVFFLGCSFSFEEALVKANLSVRHLEEGKNVPMYKTNIPCRPAGPFQGNMVVSMRPYRPEQLGRVSEVTSRMKAVHGGPIHTGDPAAIGIIDLGQPDYGDAVSIASDEVPVFFACGVTPQNVILDCRLPGIAITHAPGAMFVTDVLNDFLT 267
            +P  +RQ IR G+ TG TAG    + QANLVIL  E A +F+ FC RN KPCP+LD+T+ GSP P   +A  GAD+RTD P YR++Q+G L +EA D+T YW+DDFV F +GCSFSFE+AL+   + VRH+EEG NVPMYKT+I C PAGPF G MVVSMRP    Q  R ++VTSR  AVHGGP+H G+P  IGI DL +PD+GDAV++   EVPVF+ACGVTPQ V+++ + P I ITH+PG M +TD+ N+ L 
Sbjct:    9 SPHEVRQLIRKGQITGPTAGLAASYAQANLVILKKESAFDFLLFCQRNQKPCPVLDVTEAGSPVPA--IAAPGADIRTDFPKYRIYQHGVLTEEAADITPYWKDDFVGFLIGCSFSFEQALINHQIPVRHIEEGLNVPMYKTDIDCVPAGPFSGKMVVSMRPVPERQAVRAAQVTSRFPAVHGGPVHIGNPKGIGISDLDKPDFGDAVTVREGEVPVFWACGVTPQAVVMEAK-PDIVITHSPGHMLITDIQNESLA 262          
BLAST of EWM30399.1 vs. NCBI_GenBank
Match: gi|813134299|ref|XP_012198107.1| (hypothetical protein SPRG_19547 [Saprolegnia parasitica CBS 223.65] >gi|641537612|gb|KDO31465.1| hypothetical protein SPRG_19547 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 308.916 bits (790), Expect = 6.732e-103
Identity = 149/256 (58.20%), Postives = 183/256 (71.48%), Query Frame = 0
Query:   11 TPAALRQKIRGGRHTGTTAGCCPGFVQANLVILPIEHALEFMTFCIRNPKPCPLLDITDPGSPHPPTWLANDGADVRTDLPMYRVWQNGKLLKEADDVTDYWRDDFVVFFLGCSFSFEEALVKANLSVRHLEEGKNVPMYKTNIPCRPAGPFQGNMVVSMRPYRPEQLGRVSEVTSRMKAVHGGPIHTGDPAAIGIIDLGQPDYGDAVSIASDEVPVFFACGVTPQNVILDCRLPGIAITHAPGAMFVTDVLNDFL 266
            TP+ +R + R G  T  +AG  PG+ QANLVILP EHA +F+ FC RNPKPCPLL+++D G           G+D+RTDLP YR++++GKL  E  D+ DYW+DDFV F LGCSFSFE AL  A L VRHLEE  NVPMY+TN+PC PAG F GN+VVSMRPY+P    + + +T R   VHG P+H G PA IG+ D+ +PDYGDAV++   EVPVF+ACGVTPQ V+L  R P  AITHAPG MFVTDV N+ L
Sbjct:    3 TPSEVRAECRRGNLTSNSAGYAPGYAQANLVILPKEHAYDFLLFCQRNPKPCPLLEVSDVGCTE--MKRTAPGSDIRTDLPKYRIYEHGKLTAEVTDIRDYWKDDFVTFLLGCSFSFEGALENAGLRVRHLEEKCNVPMYRTNVPCDPAGVFSGNLVVSMRPYKPADAIKAAMITGRYPNVHGSPVHMGSPADIGVADINKPDYGDAVTMRDGEVPVFWACGVTPQAVLLASR-PAFAITHAPGHMFVTDVPNESL 255          
BLAST of EWM30399.1 vs. NCBI_GenBank
Match: gi|654963499|ref|WP_028413250.1| (DUF1445 domain-containing protein [Bacillus sp. 278922_107])

HSP 1 Score: 308.916 bits (790), Expect = 9.403e-103
Identity = 149/256 (58.20%), Postives = 186/256 (72.66%), Query Frame = 0
Query:   11 TPAALRQKIRGGRHTGTTAGCCPGFVQANLVILPIEHALEFMTFCIRNPKPCPLLDITDPGSPHPPTWLANDGADVRTDLPMYRVWQNGKLLKEADDVTDYWRDDFVVFFLGCSFSFEEALVKANLSVRHLEEGKNVPMYKTNIPCRPAGPFQGNMVVSMRPYRPEQLGRVSEVTSRMKAVHGGPIHTGDPAAIGIIDLGQPDYGDAVSIASDEVPVFFACGVTPQNVILDCRLPGIAITHAPGAMFVTDVLNDFL 266
            TPA LRQ+IR  +    TAG   G+ QANL ILP + A +F+ FC RNPK CPLLD+TD GSP P    A    D+RTDLP YR+++NG+L+KE  D+TDYW +D V F +GCSF+FE AL+  ++ VRH+EE  NVPMYKTNI C  AG F G+ VVSMRP   + + R ++VTSR  AVHGGP+H GDPAAIGI DL  PD+GDAVSI + EVPVF+ACGVTPQ V ++ + P I ITHAPG MF+TD+ ++ L
Sbjct:    8 TPAELRQQIRNNQLIQPTAGMANGYAQANLAILPKQQAFDFLLFCQRNPKSCPLLDVTDAGSPVPK--FAAPSGDIRTDLPKYRIYENGELVKEVTDITDYWTEDMVAFLIGCSFTFEHALLNNDIPVRHIEENCNVPMYKTNISCAEAGIFHGSTVVSMRPIPQQDVVRAAQVTSRFPAVHGGPVHIGDPAAIGIQDLHSPDFGDAVSIKAGEVPVFWACGVTPQAVAMETK-PSIMITHAPGHMFITDIRDEKL 260          
BLAST of EWM30399.1 vs. NCBI_GenBank
Match: gi|1004352493|ref|WP_061528982.1| (DUF1445 domain-containing protein [Bacillus nakamurai] >gi|1004078883|gb|KXZ12611.1| hypothetical protein AXI59_05865 [Bacillus nakamurai])

HSP 1 Score: 308.145 bits (788), Expect = 1.608e-102
Identity = 147/257 (57.20%), Postives = 188/257 (73.15%), Query Frame = 0
Query:   11 TPAALRQKIRGGRHTGTTAGCCPGFVQANLVILPIEHALEFMTFCIRNPKPCPLLDITDPGSPHPPTWLANDGADVRTDLPMYRVWQNGKLLKEADDVTDYWRDDFVVFFLGCSFSFEEALVKANLSVRHLEEGKNVPMYKTNIPCRPAGPFQGNMVVSMRPYRPEQLGRVSEVTSRMKAVHGGPIHTGDPAAIGIIDLGQPDYGDAVSIASDEVPVFFACGVTPQNVILDCRLPGIAITHAPGAMFVTDVLNDFLT 267
            +P  +RQ IR G+ TG TAG    + QANLVIL  E A +F+ FC RN KPCP+LD+T+ GSP P   +A  GAD+RTD P YR++Q+G L +EA D+T YW+DDFV F +GCSFSFE+AL+   + VRH+EEG NVPMYKT+I C PAGPF G MVVSMRP    Q  R ++VTSR  AVHGGP+H G+P  IGI DL +P++GDAV++   EVPVF+ACGVTPQ V+++ + P I ITH+PG M +TD+ N+ L 
Sbjct:    9 SPHEVRQLIRKGQITGPTAGLAASYAQANLVILKKESAFDFLLFCQRNQKPCPVLDVTEAGSPVPA--IAAPGADIRTDFPKYRIYQHGVLTEEAADITPYWKDDFVGFLIGCSFSFEQALINHQIPVRHIEEGLNVPMYKTDIDCVPAGPFSGKMVVSMRPVPERQAVRAAQVTSRFPAVHGGPVHIGNPKGIGISDLDKPNFGDAVTVREGEVPVFWACGVTPQAVVMEAK-PDIVITHSPGHMLITDIQNESLA 262          
BLAST of EWM30399.1 vs. NCBI_GenBank
Match: gi|1028415904|gb|OAI46138.1| (hypothetical protein AYO44_11860 [Planctomycetaceae bacterium SCGC AG-212-F19])

HSP 1 Score: 308.145 bits (788), Expect = 1.811e-102
Identity = 150/261 (57.47%), Postives = 189/261 (72.41%), Query Frame = 0
Query:    6 PNAFDTPAALRQKIRGGRHTGTTAGCCPGFVQANLVILPIEHALEFMTFCIRNPKPCPLLDITDPGSPHPPTWLANDGADVRTDLPMYRVWQNGKLLKEADDVTDYWRDDFVVFFLGCSFSFEEALVKANLSVRHLEEGKNVPMYKTNIPCRPAGPFQGNMVVSMRPYRPEQLGRVSEVTSRMKAVHGGPIHTGDPAAIGIIDLGQPDYGDAVSIASDEVPVFFACGVTPQNVILDCRLPGIAITHAPGAMFVTDVLNDFL 266
            P+A  T   +R + R G  T  TAG  PG VQANLV++P E A +F+ FC RNPKPCPLLD+T+PGSP P    A  GAD+RTDLP YRVW++G L+ E  D+T +WRDD V F +GCSF+FE+AL++A L +RHLE G+NVPMY+TNI CRPAG F+G MVVSMRP  P Q  R ++V +R    HG P+H GDPAAIGI D+ QPD+GDAV +   EVPVF+ACGVTPQ V ++ + P + ITH PG MF+TD+ +  L
Sbjct:    3 PSALRTGTEVRHQARTGALTTHTAGMAPGHVQANLVVVPRELAFDFLLFCQRNPKPCPLLDVTEPGSPEPKYTAA--GADLRTDLPCYRVWEHGILMAEPTDITPWWRDDLVAFVIGCSFTFEDALLRAGLPLRHLEMGRNVPMYRTNIACRPAGCFRGPMVVSMRPMTPAQAIRATQVCTRFPRAHGAPVHVGDPAAIGIRDISQPDFGDAVEMRPGEVPVFWACGVTPQAVAMEVQ-PALLITHKPGCMFITDLQDTDL 260          
BLAST of EWM30399.1 vs. NCBI_GenBank
Match: gi|669166396|ref|XP_008618760.1| (hypothetical protein SDRG_14414 [Saprolegnia diclina VS20] >gi|530729588|gb|EQC27830.1| hypothetical protein SDRG_14414 [Saprolegnia diclina VS20])

HSP 1 Score: 307.375 bits (786), Expect = 2.727e-102
Identity = 150/256 (58.59%), Postives = 183/256 (71.48%), Query Frame = 0
Query:   11 TPAALRQKIRGGRHTGTTAGCCPGFVQANLVILPIEHALEFMTFCIRNPKPCPLLDITDPGSPHPPTWLANDGADVRTDLPMYRVWQNGKLLKEADDVTDYWRDDFVVFFLGCSFSFEEALVKANLSVRHLEEGKNVPMYKTNIPCRPAGPFQGNMVVSMRPYRPEQLGRVSEVTSRMKAVHGGPIHTGDPAAIGIIDLGQPDYGDAVSIASDEVPVFFACGVTPQNVILDCRLPGIAITHAPGAMFVTDVLNDFL 266
            TP+ +R + R G  T  +AG  PG+ QANLVILP EHA +F+ FC RNPKPCPLL+++D G           G+D+RTDLP YR++++G+L  E  D+ DYW+DDFV F LGCSFSFE AL  A L VRHLE+  NVPMY+TNIPC PAG F GN+VVSMRPY+P    + + +T R   VHG P+H G PA IGI D+ +PDYGDAV+I   EVPVF+ACGVTPQ V+L  R P  AITHAPG MFVTDV N+ L
Sbjct:    3 TPSEVRAECRRGNLTTNSAGYAPGYAQANLVILPKEHAYDFLLFCQRNPKPCPLLEVSDVGCAE--MKRTAPGSDIRTDLPKYRIYEHGQLTAEVTDIRDYWKDDFVTFLLGCSFSFEGALENAGLRVRHLEKKCNVPMYRTNIPCDPAGVFSGNLVVSMRPYKPADAIKAAMITGRYPNVHGSPVHMGSPADIGIADVNKPDYGDAVTIRDGEVPVFWACGVTPQAVLLASR-PAFAITHAPGHMFVTDVPNESL 255          
BLAST of EWM30399.1 vs. NCBI_GenBank
Match: gi|647313743|ref|WP_025751805.1| (DUF1445 domain-containing protein [Bacillus flexus])

HSP 1 Score: 307.375 bits (786), Expect = 3.606e-102
Identity = 148/256 (57.81%), Postives = 186/256 (72.66%), Query Frame = 0
Query:   11 TPAALRQKIRGGRHTGTTAGCCPGFVQANLVILPIEHALEFMTFCIRNPKPCPLLDITDPGSPHPPTWLANDGADVRTDLPMYRVWQNGKLLKEADDVTDYWRDDFVVFFLGCSFSFEEALVKANLSVRHLEEGKNVPMYKTNIPCRPAGPFQGNMVVSMRPYRPEQLGRVSEVTSRMKAVHGGPIHTGDPAAIGIIDLGQPDYGDAVSIASDEVPVFFACGVTPQNVILDCRLPGIAITHAPGAMFVTDVLNDFL 266
            TPA LRQ+IR  +    TAG   G+ QANL ILP + A +F+ FC RNPK CPLLD+TD GSP P    A    D+RTD+P YR+++NG+L+KE  D+TDYW +D V F +GCSF+FE AL+  +++VRH+EE  NVPMYKTNIPC  AG F G+ VVSMRP   + + R ++VTSR  AVHGGP+H GDPAAIGI DL  PD+GDAV I   EVPVF+ACGVTPQ V ++ + P I ITHAPG MF+TD+ ++ L
Sbjct:    8 TPAELRQQIRNNQLIQPTAGMANGYAQANLAILPKKQAFDFLLFCQRNPKSCPLLDVTDVGSPVPK--FAAPSGDIRTDIPKYRIYENGELVKEVTDITDYWTEDMVAFLIGCSFTFEHALLNNDITVRHIEENCNVPMYKTNIPCAEAGIFHGSAVVSMRPIPQQDVVRAAQVTSRFPAVHGGPVHIGDPAAIGIEDLHSPDFGDAVLIKEGEVPVFWACGVTPQAVAMETK-PSIMITHAPGHMFITDIRDEKL 260          
BLAST of EWM30399.1 vs. NCBI_GenBank
Match: gi|844765451|ref|WP_047933250.1| (DUF1445 domain-containing protein [Bacillus megaterium] >gi|837647044|gb|KLV29650.1| hypothetical protein ABW04_23180 [Bacillus megaterium])

HSP 1 Score: 306.99 bits (785), Expect = 4.951e-102
Identity = 147/256 (57.42%), Postives = 185/256 (72.27%), Query Frame = 0
Query:   11 TPAALRQKIRGGRHTGTTAGCCPGFVQANLVILPIEHALEFMTFCIRNPKPCPLLDITDPGSPHPPTWLANDGADVRTDLPMYRVWQNGKLLKEADDVTDYWRDDFVVFFLGCSFSFEEALVKANLSVRHLEEGKNVPMYKTNIPCRPAGPFQGNMVVSMRPYRPEQLGRVSEVTSRMKAVHGGPIHTGDPAAIGIIDLGQPDYGDAVSIASDEVPVFFACGVTPQNVILDCRLPGIAITHAPGAMFVTDVLNDFL 266
            TPA LRQ+IR  +    TAG   G+ QANL ILP + A +F+ FC RNPK CP+LD+TD GSP P    A    D+RTD+P YR+++NG+L+KE  D+TDYW +D V F +GCSF+FE AL+  ++ VRH+EE  NVPMYKTNI C  AG F G+ VVSMRP   + + R ++VTSR  AVHGGP+H GDPAAIGI DL  PD+GDAVSI   EVPVF+ACGVTPQ V ++ + P I ITHAPG MF+TD+ ++ L
Sbjct:    8 TPAELRQQIRNNQLIQPTAGMANGYAQANLAILPKQQAFDFLLFCQRNPKSCPILDVTDAGSPVPK--FAAPSGDIRTDIPKYRIYENGELVKEVTDITDYWTEDMVAFLIGCSFTFEHALLNNDIRVRHIEENCNVPMYKTNISCAEAGIFHGSTVVSMRPIPQQDVVRAAQVTSRFPAVHGGPVHIGDPAAIGIEDLHSPDFGDAVSIKEGEVPVFWACGVTPQAVAMETK-PSIMITHAPGHMFITDIRDEKL 260          
The following BLAST results are available for this feature:
BLAST of EWM30399.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585113059|gb|EWM30399.1|0.000e+0100.00Uncharacterized protein family UPF0317 [Nannochlor... [more]
gi|698778951|ref|XP_009822519.1|6.307e-10457.58hypothetical protein H257_01155 [Aphanomyces astac... [more]
gi|1004345260|ref|WP_061522805.1|3.482e-10357.59DUF1445 domain-containing protein [Bacillus nakamu... [more]
gi|813134299|ref|XP_012198107.1|6.732e-10358.20hypothetical protein SPRG_19547 [Saprolegnia paras... [more]
gi|654963499|ref|WP_028413250.1|9.403e-10358.20DUF1445 domain-containing protein [Bacillus sp. 27... [more]
gi|1004352493|ref|WP_061528982.1|1.608e-10257.20DUF1445 domain-containing protein [Bacillus nakamu... [more]
gi|1028415904|gb|OAI46138.1|1.811e-10257.47hypothetical protein AYO44_11860 [Planctomycetacea... [more]
gi|669166396|ref|XP_008618760.1|2.727e-10258.59hypothetical protein SDRG_14414 [Saprolegnia dicli... [more]
gi|647313743|ref|WP_025751805.1|3.606e-10257.81DUF1445 domain-containing protein [Bacillus flexus... [more]
gi|844765451|ref|WP_047933250.1|4.951e-10257.42DUF1445 domain-containing protein [Bacillus megate... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna263rna263Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications