EWM28074.1, cds2622 (CDS) Nannochloropsis gaditana

Overview
NameEWM28074.1
Unique Namecds2622
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002459.1:834821..834840 +
Alignment locationCM002459.1:834891..835071 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM28074.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100044g7.1088.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:834821..834840 +
CM002459.1supercontigCM002459.1:834891..835071 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM28074.1 vs. NCBI_GenBank
Match: gi|585110416|gb|EWM28074.1| (hypothetical protein Naga_100044g7 [Nannochloropsis gaditana])

HSP 1 Score: 135.961 bits (341), Expect = 1.090e-40
Identity = 66/66 (100.00%), Postives = 66/66 (100.00%), Query Frame = 0 
Query:    1 MKGPIDDDYVSRRGAYEISRNKIRRWETKKSSLLSHYLQSWKRLDKHHLELVYIRFWEVHVVRTTG 66
            MKGPIDDDYVSRRGAYEISRNKIRRWETKKSSLLSHYLQSWKRLDKHHLELVYIRFWEVHVVRTTG
Sbjct:    1 MKGPIDDDYVSRRGAYEISRNKIRRWETKKSSLLSHYLQSWKRLDKHHLELVYIRFWEVHVVRTTG 66
The following BLAST results are available for this feature:
BLAST of EWM28074.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585110416|gb|EWM28074.1|1.090e-40100.00hypothetical protein Naga_100044g7 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2630rna2630Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications