EWM28072.1, cds2610 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28072.1 vs. NCBI_GenBank
Match: gi|585110414|gb|EWM28072.1| (hypothetical protein Naga_100044g22 [Nannochloropsis gaditana]) HSP 1 Score: 719.153 bits (1855), Expect = 0.000e+0 Identity = 361/361 (100.00%), Postives = 361/361 (100.00%), Query Frame = 0 Query: 1 MTRPSEKLSILRLIRHRQVFPRMQRIIPRLKASTAPTRRRMRLTSWVLTLGFLLGHASAFVRLRPASPVLAGLREHPFDNKFAVKSTVLLKKTYYRRLSATGPVAPSFSTENGLIPRVKTLAKNMVTGLPLVAFSTISGGMLAGSLHAVTGPDHLAALLPRCIGKRWYQAMRIGAVWGLGHGISAIIMGMVAFFLKGRLSTYSHSTLIPKLSLYTEVLIGVSLIIIGLLGLKEAAHFDVSAVMPLEAEGSITGSGASGAAKKKATGKAVFLNGLLHGFSWDGTPTLAPALAFDSWLPVMTFLCSYGLGTMLSMSTATSLIGEGTVKVGQALDKPNIPKKLAQGSSVVAILVGLVWTVKALV 361 MTRPSEKLSILRLIRHRQVFPRMQRIIPRLKASTAPTRRRMRLTSWVLTLGFLLGHASAFVRLRPASPVLAGLREHPFDNKFAVKSTVLLKKTYYRRLSATGPVAPSFSTENGLIPRVKTLAKNMVTGLPLVAFSTISGGMLAGSLHAVTGPDHLAALLPRCIGKRWYQAMRIGAVWGLGHGISAIIMGMVAFFLKGRLSTYSHSTLIPKLSLYTEVLIGVSLIIIGLLGLKEAAHFDVSAVMPLEAEGSITGSGASGAAKKKATGKAVFLNGLLHGFSWDGTPTLAPALAFDSWLPVMTFLCSYGLGTMLSMSTATSLIGEGTVKVGQALDKPNIPKKLAQGSSVVAILVGLVWTVKALV Sbjct: 1 MTRPSEKLSILRLIRHRQVFPRMQRIIPRLKASTAPTRRRMRLTSWVLTLGFLLGHASAFVRLRPASPVLAGLREHPFDNKFAVKSTVLLKKTYYRRLSATGPVAPSFSTENGLIPRVKTLAKNMVTGLPLVAFSTISGGMLAGSLHAVTGPDHLAALLPRCIGKRWYQAMRIGAVWGLGHGISAIIMGMVAFFLKGRLSTYSHSTLIPKLSLYTEVLIGVSLIIIGLLGLKEAAHFDVSAVMPLEAEGSITGSGASGAAKKKATGKAVFLNGLLHGFSWDGTPTLAPALAFDSWLPVMTFLCSYGLGTMLSMSTATSLIGEGTVKVGQALDKPNIPKKLAQGSSVVAILVGLVWTVKALV 361
BLAST of EWM28072.1 vs. NCBI_GenBank
Match: gi|585110415|gb|EWM28073.1| (hypothetical protein Naga_100044g22 [Nannochloropsis gaditana]) HSP 1 Score: 711.835 bits (1836), Expect = 0.000e+0 Identity = 360/361 (99.72%), Postives = 360/361 (99.72%), Query Frame = 0 Query: 1 MTRPSEKLSILRLIRHRQVFPRMQRIIPRLKASTAPTRRRMRLTSWVLTLGFLLGHASAFVRLRPASPVLAGLREHPFDNKFAVKSTVLLKKTYYRRLSATGPVAPSFSTENGLIPRVKTLAKNMVTGLPLVAFSTISGGMLAGSLHAVTGPDHLAALLPRCIGKRWYQAMRIGAVWGLGHGISAIIMGMVAFFLKGRLSTYSHSTLIPKLSLYTEVLIGVSLIIIGLLGLKEAAHFDVSAVMPLEAEGSITGSGASGAAKKKATGKAVFLNGLLHGFSWDGTPTLAPALAFDSWLPVMTFLCSYGLGTMLSMSTATSLIGEGTVKVGQALDKPNIPKKLAQGSSVVAILVGLVWTVKALV 361 MTRPSEKLSILRLIRHRQVFPRMQRIIPRLKASTAPTRRRMRLTSWVLTLGFLLGHASAFVRLRPASPVLAGLREHPFDNKFAVKSTVLLKKTYYRRLSATGPVAPSFSTENGLIPRVKTLAKNMVTGLPLVAFSTISGGMLAGSLHAVTGPDHLAALLPRCIGKRWYQAMRIGAVWGLGHGISAIIMGMVAFFLKGRLSTYSHSTLIPKLSLYTEVLIGVSLIIIGLLGLKEAAHFDVSAVMPLEAEGSITGSGASGAA KKATGKAVFLNGLLHGFSWDGTPTLAPALAFDSWLPVMTFLCSYGLGTMLSMSTATSLIGEGTVKVGQALDKPNIPKKLAQGSSVVAILVGLVWTVKALV Sbjct: 1 MTRPSEKLSILRLIRHRQVFPRMQRIIPRLKASTAPTRRRMRLTSWVLTLGFLLGHASAFVRLRPASPVLAGLREHPFDNKFAVKSTVLLKKTYYRRLSATGPVAPSFSTENGLIPRVKTLAKNMVTGLPLVAFSTISGGMLAGSLHAVTGPDHLAALLPRCIGKRWYQAMRIGAVWGLGHGISAIIMGMVAFFLKGRLSTYSHSTLIPKLSLYTEVLIGVSLIIIGLLGLKEAAHFDVSAVMPLEAEGSITGSGASGAA-KKATGKAVFLNGLLHGFSWDGTPTLAPALAFDSWLPVMTFLCSYGLGTMLSMSTATSLIGEGTVKVGQALDKPNIPKKLAQGSSVVAILVGLVWTVKALV 360
BLAST of EWM28072.1 vs. NCBI_GenBank
Match: gi|299471899|emb|CBN77069.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 228.794 bits (582), Expect = 2.406e-70 Identity = 122/229 (53.28%), Postives = 160/229 (69.87%), Query Frame = 0 Query: 139 GGMLAGSLHAVTGPDHLAALLPRCIGKRWYQAMRIGAVWGLGHGISAIIMGMVAFFLKGRLSTYSHSTLIPKLSLYTEVLIGVSLIIIGLLGLKEAAHFDVSAVMPLEAEGSITG-------SGASGAAKKKATGKAVFLNGLLHGFSWDGTPTLAPALAFDSWLPVMTFLCSYGLGTMLSMSTATSLIGEGTVKVGQALDKPNIPKKLAQGSSVVAILVGLVWTVKAL 360 GG+LAG LHAV+GPDHLAALLPR +G++W+++MRIGA WGLGHG SA ++G+ AFF K RL + L+ + +TE L+GVSLI IGLLGLKE+ D EA+ + + G G K +A+F NG+LHGFSWDG P+LAPALA SW V+ FL +Y GTM++MS T+LIGEG+V+VG+ALD+P+IP+KL+ SS VAI +G VW KA+ Sbjct: 8 GGVLAGGLHAVSGPDHLAALLPRIMGQKWHKSMRIGATWGLGHGFSATVIGLAAFFFKDRLGLGHNKRLVAMMGSWTEGLVGVSLIAIGLLGLKESL-LDYEETPAFEAKSAGSAVVEGGGAPGGGGMTKSGGGERAIFFNGVLHGFSWDGAPSLAPALALSSWGSVLWFLLAYCSGTMVAMSATTTLIGEGSVRVGKALDQPDIPRKLSVVSSFVAITIGAVWLAKAV 235
BLAST of EWM28072.1 vs. NCBI_GenBank
Match: gi|219125514|ref|XP_002183023.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217405298|gb|EEC45241.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 212.616 bits (540), Expect = 4.870e-63 Identity = 114/227 (50.22%), Postives = 159/227 (70.04%), Query Frame = 0 Query: 137 ISGGMLAGSLHAVTGPDHLAALLPRCIGKRWYQAMRIGAVWGLGHGISAIIMGMVAFFLKGRLSTYSHS------TLIPKLSLYTEVLIGVSLIIIGLLGLKEAAHFD--VSAVMPLEAEGSITGSGASGAAKKKATGKAVFLNGLLHGFSWDGTPTLAPALAFDSWLPVMTFLCSYGLGTMLSMSTATSLIGEGTVKVGQALDKPNIPKKLAQGSSVVAILVGLVW 355 ++GG+ AG LHA+ GPDHLAALLPRC G+RWY+A R+GA+WG+GHG+SA I+G+ AF LK +T+ +S TL+ + TE+ +G+SLI+IG++G++EA ++ + V P S A+ A K A +AV NGLLHGFSWDG P+LAPALA +W + FL SY +GTM +M+ AT+LIGEGT K G D+P+IP+KL+ SS++AI +G+VW Sbjct: 85 MTGGLFAGGLHAIAGPDHLAALLPRCCGQRWYRAGRVGALWGMGHGVSATIIGVAAFGLK---NTFKNSMGSRLQTLVAGATHVTEIAVGLSLILIGMMGIREAREWEDELDGVQPQSLS-----SAAADAGIKTAQKRAVVFNGLLHGFSWDGAPSLAPALAVATWSGNLAFLFSYAVGTMTTMAIATTLIGEGTRKAGDFFDRPDIPQKLSFASSILAIAIGIVW 303
BLAST of EWM28072.1 vs. NCBI_GenBank
Match: gi|1210518917|dbj|GAX22199.1| (hypothetical protein FisN_19Lh263 [Fistulifera solaris]) HSP 1 Score: 211.075 bits (536), Expect = 1.388e-62 Identity = 109/226 (48.23%), Postives = 160/226 (70.80%), Query Frame = 0 Query: 137 ISGGMLAGSLHAVTGPDHLAALLPRCIGKRWYQAMRIGAVWGLGHGISAIIMGMVAFFLKGRLSTYS-HSTLIPKLSLYTEVLIGVSLIIIGLLGLKEAAHFDVSAVMPLEAEGSITGSGASGAAKKKATGK-AVFLNGLLHGFSWDGTPTLAPALAFDSWLPVMTFLCSYGLGTMLSMSTATSLIGEGTVKVGQALDKPNIPKKLAQGSSVVAILVGLVWTVKAL 360 I+GG+ AG LHA+ GPDHLAALLPRC G+RWY+A+R+GA+WG+GHG+SA ++G+ AF LK + ++ S TE+ +G+SLI+IG++G++EA ++ + A S++ + A K +T K AV NG+LHGFSWDG P+LAPA+A +W + FL +Y +GTM +M+ AT+LIGEGT K GQ LD+P+IP+KL+ SS++A+++G VW A+ Sbjct: 70 ITGGLFAGGLHAIAGPDHLAALLPRCCGQRWYRAVRVGALWGMGHGLSATVLGLTAFGLKSTVQNMKGMQKVLAGASHVTEIAVGLSLIVIGVMGIREAREWEQDLTTTMGASQSLSAAVVDEVASKHSTQKRAVLFNGILHGFSWDGAPSLAPAVAVATWGGSLAFLSAYAIGTMTTMALATTLIGEGTRKAGQVLDRPDIPQKLSFVSSILAMVIGAVWCYLAV 295
BLAST of EWM28072.1 vs. NCBI_GenBank
Match: gi|223993629|ref|XP_002286498.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220977813|gb|EED96139.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 213.001 bits (541), Expect = 1.643e-62 Identity = 110/243 (45.27%), Postives = 152/243 (62.55%), Query Frame = 0 Query: 139 GGMLAGSLHAVTGPDHLAALLPRCIGKRWYQAMRIGAVWGLGHGISAIIMGMVAFFLKGRLSTYSHS--------TLIPKLSLYTEVLIGVSLIIIGLLGLKEAAHFDVSAVMPLEAEGSITGSGASGAAKK-------------KATGKAVFLNGLLHGFSWDGTPTLAPALAFDSWLPVMTFLCSYGLGTMLSMSTATSLIGEGTVKVGQALDKPNIPKKLAQGSSVVAILVGLVWTVKAL 360 GG+ AGSLHA+ GPDHLAAL+PRC G WY+A RIGAVWGLGHG+SA ++GM + +K ++ + H ++ + E+ IGVSLI+IGLLG+KEA ++ E + TG G + K A+ NG+LHGFSWDG P+LAPA+A +W +TFL SY LGTM +M+ AT++IGEGT + LD+P++P+ L+ GSS +A++VG+VW AL Sbjct: 120 GGLFAGSLHAIAGPDHLAALIPRCCGLPWYRAARIGAVWGLGHGVSATLLGMAGYLVKRGVNLFGHGGVMGGGKFDVLHHAGSFMELAIGVSLIVIGLLGIKEAREWESPGESACEVTDAATGEEEGGQQPQSLSAAVTPNSSPIKTAKSAILFNGILHGFSWDGAPSLAPAVAISTWRGSLTFLISYALGTMAAMTLATTVIGEGTRRASDKLDRPDLPRDLSVGSSFLALIVGVVWCGLAL 362
BLAST of EWM28072.1 vs. NCBI_GenBank
Match: gi|1072234974|gb|OEU19703.1| (hypothetical protein FRACYDRAFT_274568 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 210.305 bits (534), Expect = 4.788e-62 Identity = 113/234 (48.29%), Postives = 156/234 (66.67%), Query Frame = 0 Query: 130 PLVAFST--ISGGMLAGSLHAVTGPDHLAALLPRCIGKRWYQAMRIGAVWGLGHGISAIIMGMVAFFLKGRLSTYSHSTLI-PKLSLYTEVLIGVSLIIIGLLGLKEAAHFDVSAVMPLEAEGSITGSGASGAAKKKATGKAVFLNGLLHGFSWDGTPTLAPALAFDSWLPVMTFLCSYGLGTMLSMSTATSLIGEGTVKVGQALDKPNIPKKLAQGSSVVAILVGLVWTVKAL 360 P VA T I+GG+L G+LHA+ GPDHLAALLPRC G+RWY A RIG +WGLGHG S I+G++ + LK +L+ S + +I + + EV +G+SLIIIG++GLKEA + M S++ + K +AV NGLLHGFSWDG P+LAPALA SW + FL +Y GT+ M+ ATSLIGEGT + G+ ++P++P+KL+ +S++AI +G+VW AL Sbjct: 78 PAVAAVTGVITGGILGGALHAIAGPDHLAALLPRCCGQRWYNAGRIGILWGLGHGTSVTILGILGYALKSQLTKASGAKVILTGAAHFMEVAVGLSLIIIGIMGLKEAREWGEE--MEELPTYSLSSAVTPSEGKANNGNRAVIFNGLLHGFSWDGAPSLAPALAVASWGGNLAFLSAYAAGTIGVMAIATSLIGEGTRRAGEVFNRPDLPQKLSFFTSLLAITIGVVWCGLAL 309
BLAST of EWM28072.1 vs. NCBI_GenBank
Match: gi|873241305|emb|CEL92570.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 213.386 bits (542), Expect = 9.733e-62 Identity = 114/239 (47.70%), Postives = 157/239 (65.69%), Query Frame = 0 Query: 129 LPLVAFSTISGGMLAGSLHAVTGPDHLAALLPRCIGKRWYQAMRIGAVWGLGHGISAIIMGMVAFFLKGRLSTYSHS-----TLIPKLSLYTEVLIGVSLIIIGLLGLKEAAHFDVSAVM-PLEAEG-SITGSGASGAAKKKATGKAVFLNGLLHGFSWDGTPTLAPALAFDSWLPVMTFLCSYGLGTMLSMSTATSLIGEGTVKVGQALDKPNIPKKLAQGSSVVAILVGLVWTVKAL 360 LP + T+ GG LAGSLHAV+GPDHLAALLP+C+G+RW A ++G VWGLGHG+SA+IMGM+AF LK R+ + LI ++ +TE L+G+SLI+IG G KEA +D + L+A G + G +F NG+LHGFS DG P LAP+L+F W V FL SY GTML+MS ++ GEG++++ +A+D+P+IPK+LA G+S A +G+VW KA+ Sbjct: 205 LPAASIVTVGGGALAGSLHAVSGPDHLAALLPQCLGRRWTGAGKLGLVWGLGHGLSAMIMGMLAFVLKDRIFVMDAAGLHGGALIERMETWTEGLVGLSLILIGFFGYKEARSWDAEELQAQLDARAKEEQKEGYRDLSASLRRGLTLFFNGMLHGFSLDGAPGLAPSLSFTRWPAVFLFLLSYCTGTMLTMSACSAAAGEGSIRLTRAVDRPDIPKRLAFGASAFAAGIGIVWFAKAI 443
BLAST of EWM28072.1 vs. NCBI_GenBank
Match: gi|1210521687|dbj|GAX19677.1| (hypothetical protein FisN_19Hh263 [Fistulifera solaris]) HSP 1 Score: 192.586 bits (488), Expect = 3.319e-56 Identity = 113/238 (47.48%), Postives = 165/238 (69.33%), Query Frame = 0 Query: 129 LPL-VAFSTISGGMLAGSLHAVTGPDHLAALLPRCIGKRWYQAMRIGAVWGLGHGISAIIMGMVAFFLKGRLSTYSHSTLIPKL----SLYTEVLIGVSLIIIGLLGLKEAAHFDVSAVMPLEAEGSITGSGASGAAKKKATGK-AVFLNGLLHGFSWDGTPTLAPALAFDSWLPVMTFLCSYGLGTMLSMSTATSLIGEGTVKVGQALDKPNIPKKLAQGSSVVAILVGLVWTVKAL 360 LP+ + F T S G+ + H V GPDHLAALLPRC G+RWY+A+R+GA+WG+GHG+SA ++G+ AF LK ST + I K+ S TE+ +G+SLI+IG++G++EA ++ + ++ S++ + A K +T K AV NG+LHGFSWDG P+LAPA+A +W + FL +Y +GTM +M+ AT+LIGEGT K GQ LD+P+IP+KL+ SS++AI++G VW A+ Sbjct: 3 LPVRIQFYTFSHGIHS---HFV-GPDHLAALLPRCCGQRWYRAVRVGALWGMGHGLSATLLGLTAFGLK---STINRMKGIEKVLAGASHVTEIAVGLSLIVIGVMGIREAREWEQDLTTTMASQ-SLSAAVVDQVASKHSTQKRAVLFNGILHGFSWDGAPSLAPAVAVATWGGSLAFLSAYAVGTMTTMALATTLIGEGTRKAGQVLDRPDIPQKLSFVSSILAIVIGAVWCYLAV 232
BLAST of EWM28072.1 vs. NCBI_GenBank
Match: gi|397635608|gb|EJK71932.1| (hypothetical protein THAOC_06584 [Thalassiosira oceanica]) HSP 1 Score: 172.17 bits (435), Expect = 2.024e-47 Identity = 118/283 (41.70%), Postives = 161/283 (56.89%), Query Frame = 0 Query: 80 NKFAVKSTVLLKKTYYRRLSATGPVAPSFSTENGLIPRVKTLAKNMVTGLPLVAFSTISGGMLAGSLHAVTGPDHLAALLPRCIGKRWYQAMRIGAVWGLGHGISAIIMGMVAFFLKGRLSTYSHSTLIPKLSLYT------EVLIGVSLIIIGLLGLKEAAHFDVSAVMPLEAEGSITGSGASGAAKKKATGKAVFLNGLLHGFSWDGTPTLAPALAFDSWLPVMTFLCSYGLGTMLSMSTATSLIGEGTVKVGQALDKPNIPKKLAQGSSVVAILVGLVWT 356 ++ A V L +RR AT A F+ + T++ A +GG+ +GSLHA+ GPDHLAAL+PRC G +WY A R+GA+WGLGHG SA ++GM F LK ++ + E+ IG+SLIIIGLLG+KEA + + P S S + A K V LNGLLHGFSWDG P+LAPA+A SW +TFL +Y GTM +M+ AT++IGEGT K LD+P++P+ L+ SS +A++VG+VW Sbjct: 34 SRIARVEQVALSHDIHRREEATQLHAKPFAASALPAASLATIS----------ALELTTGGVFSGSLHAIAGPDHLAALIPRCCGLKWYSAARVGAIWGLGHGFSATLLGMAGFLLKKGVNLTGFGGFGLGMDWTKHAGSAMELAIGISLIIIGLLGVKEAREWSSPSGSPQSL--SSAASPEALAVNPNQPTKRVLLNGLLHGFSWDGAPSLAPAVAVSSWKGSLTFLLAYAFGTMATMTLATTVIGEGTCKAAGKLDRPDLPRDLSVASSFLALIVGVVWC 304 The following BLAST results are available for this feature:
BLAST of EWM28072.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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