EWM28046.1, cds2596 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28046.1 vs. NCBI_GenBank
Match: gi|585110388|gb|EWM28046.1| (pyridoxamine 5-phosphate oxidase, putative [Nannochloropsis gaditana]) HSP 1 Score: 1023.85 bits (2646), Expect = 0.000e+0 Identity = 501/501 (100.00%), Postives = 501/501 (100.00%), Query Frame = 0
Query: 1 MRSRTPLLQFLVASVSSSSSFAAGPTSHAHPRPHQALAFVTHSLAWGSIRAISSSITLASASSVGDLPAALNEGGKGGTCRSFSGVPLHSDSNSNNMGDPCKGSDAAVSSWRQRITLLTQKEAQAIDEELMGTPGFSVDQLMELAGLSVASAIHDFLAQPTRSASILILCGPGNNGGDGLVAARHLYHFGYRPVVVYPKRPARPLFTNLVKQCEDLGIHVGVDMPEDIEAKFDCVVDALFGFGTAGPLRAPFGEMMQVLSKLTTPIVSVDIPSGWDVEAGDVYGTGFTPDALVSLTAPKKCAALFRGRHYLGGRFVPPGLQHQYGLDALPAYPGTCQCVEIEGWDEEGGDEGDKDRDGRGREAPEDRESTARGRPSASPASALTPASTPEFVVVWITAPDAKEASTLAERLVESDLAACVNIVPRVESVYKWEGKVERNGEVLLMAKTRASLVPELSAFVTKHHSYDVPETIAAGIVGGGPEYLKWVRESTREPADGRDTD 501
MRSRTPLLQFLVASVSSSSSFAAGPTSHAHPRPHQALAFVTHSLAWGSIRAISSSITLASASSVGDLPAALNEGGKGGTCRSFSGVPLHSDSNSNNMGDPCKGSDAAVSSWRQRITLLTQKEAQAIDEELMGTPGFSVDQLMELAGLSVASAIHDFLAQPTRSASILILCGPGNNGGDGLVAARHLYHFGYRPVVVYPKRPARPLFTNLVKQCEDLGIHVGVDMPEDIEAKFDCVVDALFGFGTAGPLRAPFGEMMQVLSKLTTPIVSVDIPSGWDVEAGDVYGTGFTPDALVSLTAPKKCAALFRGRHYLGGRFVPPGLQHQYGLDALPAYPGTCQCVEIEGWDEEGGDEGDKDRDGRGREAPEDRESTARGRPSASPASALTPASTPEFVVVWITAPDAKEASTLAERLVESDLAACVNIVPRVESVYKWEGKVERNGEVLLMAKTRASLVPELSAFVTKHHSYDVPETIAAGIVGGGPEYLKWVRESTREPADGRDTD
Sbjct: 1 MRSRTPLLQFLVASVSSSSSFAAGPTSHAHPRPHQALAFVTHSLAWGSIRAISSSITLASASSVGDLPAALNEGGKGGTCRSFSGVPLHSDSNSNNMGDPCKGSDAAVSSWRQRITLLTQKEAQAIDEELMGTPGFSVDQLMELAGLSVASAIHDFLAQPTRSASILILCGPGNNGGDGLVAARHLYHFGYRPVVVYPKRPARPLFTNLVKQCEDLGIHVGVDMPEDIEAKFDCVVDALFGFGTAGPLRAPFGEMMQVLSKLTTPIVSVDIPSGWDVEAGDVYGTGFTPDALVSLTAPKKCAALFRGRHYLGGRFVPPGLQHQYGLDALPAYPGTCQCVEIEGWDEEGGDEGDKDRDGRGREAPEDRESTARGRPSASPASALTPASTPEFVVVWITAPDAKEASTLAERLVESDLAACVNIVPRVESVYKWEGKVERNGEVLLMAKTRASLVPELSAFVTKHHSYDVPETIAAGIVGGGPEYLKWVRESTREPADGRDTD 501
BLAST of EWM28046.1 vs. NCBI_GenBank
Match: gi|1108896945|ref|XP_019110392.1| (PREDICTED: NAD(P)H-hydrate epimerase [Larimichthys crocea] >gi|1108896950|ref|XP_019110399.1| PREDICTED: NAD(P)H-hydrate epimerase [Larimichthys crocea]) HSP 1 Score: 265.003 bits (676), Expect = 7.801e-82 Identity = 145/270 (53.70%), Postives = 178/270 (65.93%), Query Frame = 0
Query: 78 GTCRSFSGVPLHSDSNSNNMGDPCKGSDAAVSSWRQRITLLTQKEAQAIDEELMGTPGFSVDQLMELAGLSVASAIHDFLAQPTRSA-----SILILCGPGNNGGDGLVAARHLYHFGYRPVVVYPKRPARPLFTNLVKQCEDLGIHVGVDMPED--IEAKFDCVVDALFGFGTAGPLRAPFGEMMQVLSKLTTPIVSVDIPSGWDVEAGDVYGTGFTPDALVSLTAPKKCAALFRGR-HYLGGRFVPPGLQHQYGLDALPAYPGTCQCV 339
GTC PL + +N N+ C S A ++ Q I L Q+EAQ IDEEL GFSVDQLMELAGLS A+A+ A P S S+L++CGPGNNGGDGLV ARHL FGY P ++YPKRP +PLF NL QC+ + I +MPE ++ ++ V+DA+FGF G +R PFG ++ VL K T PI S+DIPSGWDVE G G PD L+SLTAPKK A+LFRGR H+LGGRFVPPGL+ +Y L+ LP YPGT CV
Sbjct: 26 GTC------PLSAAAN-NHKKTECFSSRPA-TTMAQTIKYLGQEEAQHIDEELFSEYGFSVDQLMELAGLSCATAVTR--AYPITSLVKARPSLLVICGPGNNGGDGLVCARHLKLFGYEPTILYPKRPNKPLFNNLTTQCQKMEIPFLTEMPEAKVVDEAYNLVIDAIFGFSFKGAVREPFGSILNVLKKTTVPIASIDIPSGWDVEEGS--ADGLQPDMLISLTAPKKSASLFRGRYHFLGGRFVPPGLERKYQLN-LPQYPGT-DCV 281
BLAST of EWM28046.1 vs. NCBI_GenBank
Match: gi|1007785548|ref|XP_015829558.1| (PREDICTED: NAD(P)H-hydrate epimerase [Nothobranchius furzeri] >gi|1007785551|ref|XP_015829560.1| PREDICTED: NAD(P)H-hydrate epimerase [Nothobranchius furzeri] >gi|1007785553|ref|XP_015829561.1| PREDICTED: NAD(P)H-hydrate epimerase [Nothobranchius furzeri]) HSP 1 Score: 264.233 bits (674), Expect = 1.032e-81 Identity = 142/256 (55.47%), Postives = 173/256 (67.58%), Query Frame = 0
Query: 92 SNSNNMGDPCKGSDAAVSSWRQRITLLTQKEAQAIDEELMGTPGFSVDQLMELAGLSVASAIHDFLAQPTRSA-----SILILCGPGNNGGDGLVAARHLYHFGYRPVVVYPKRPARPLFTNLVKQCEDLGIHVGVDMPED--IEAKFDCVVDALFGFGTAGPLRAPFGEMMQVLSKLTTPIVSVDIPSGWDVEAGDVYGTGFTPDALVSLTAPKKCAALFRGR-HYLGGRFVPPGLQHQYGLDALPAYPGTCQCV 339
S++N + C GS +A S+ Q I L Q+EAQ +DEEL GFSVDQLMELAGLS A+AI A P S ++L++CGPGNNGGDGLV ARHL FGY P ++YPKRP +PLF L QCE + I +MPE I+ ++ V+DA+FGF G +R PFG ++ L K T PI S+DIPSGWDVE G G PD LVSLTAPKK A+LFRGR H+LGGRFVPPGL+ +Y L+ LP YPGT CV
Sbjct: 30 SSANRHNEACSGSRSA-STMAQTIKYLGQEEAQKVDEELFSEYGFSVDQLMELAGLSCATAITR--AYPLASLRKARPALLVVCGPGNNGGDGLVCARHLRLFGYEPTILYPKRPNKPLFQGLTTQCEKMEIPFLTEMPEAEVIDEAYNLVIDAIFGFSFKGSVREPFGSILDQLKKTTIPIASIDIPSGWDVETGS--ADGLRPDTLVSLTAPKKSASLFRGRYHFLGGRFVPPGLERKYQLN-LPHYPGT-DCV 278
BLAST of EWM28046.1 vs. NCBI_GenBank
Match: gi|676393941|ref|XP_009040248.1| (hypothetical protein AURANDRAFT_31365 [Aureococcus anophagefferens] >gi|323449232|gb|EGB05122.1| hypothetical protein AURANDRAFT_31365 [Aureococcus anophagefferens]) HSP 1 Score: 262.692 bits (670), Expect = 1.097e-81 Identity = 142/234 (60.68%), Postives = 169/234 (72.22%), Query Frame = 0
Query: 112 RQRITLLTQKEAQAIDEELMGTPGFSVDQLMELAGLSVASAIHDFLAQPTRSASILILCGPGNNGGDGLVAARHLYHFGYRPV-VVYPKRPARPLFTNLVKQCEDLGIHVGVDMPEDIEAKFDCVVDALFGFGTAGPLRAPFGEMMQVLSKLTTPIVSVDIPSGWDVEAGDVYGTGFTPDALVSLTAPKKCAALFRGRHYLGGRFVPPGLQHQYGLDALPAYPGTCQCVEIEGW 344
R+ +TLL Q+ A A+D +LM +PGFS+DQLMELAGLSVA A+ D A P + ILI+ GPGNNGGDGLVAARHL+HFG R V VVYPKRP RPLF NLVKQCEDL I V MP+ A FD V+DA+FGF G RAPF E+++ L + +TP+VSVD PSGW VE G PD LVSLTAPKKCA+ F GRHY+GGRFVPP + +YGL+ LP Y G Q +E+ W
Sbjct: 7 RKGVTLLGQEAAIALDVDLMESPGFSIDQLMELAGLSVACAVRD--AYPA-ADGILIVAGPGNNGGDGLVAARHLWHFGARNVRVVYPKRPDRPLFRNLVKQCEDLRIPVEDAMPD--TAGFDVVLDAVFGFSFYGEPRAPFDEILRDLERTSTPLVSVDTPSGWHVEDGPTGPVKLAPDVLVSLTAPKKCASHFAGRHYVGGRFVPPRVAEKYGLE-LPPYLGASQILELPNW 234
BLAST of EWM28046.1 vs. NCBI_GenBank
Match: gi|1168910579|ref|XP_020497949.1| (NAD(P)H-hydrate epimerase [Labrus bergylta] >gi|1168910581|ref|XP_020497950.1| NAD(P)H-hydrate epimerase [Labrus bergylta]) HSP 1 Score: 263.848 bits (673), Expect = 1.712e-81 Identity = 142/254 (55.91%), Postives = 170/254 (66.93%), Query Frame = 0
Query: 94 SNNMGDPCKGSDAAVSSWRQRITLLTQKEAQAIDEELMGTPGFSVDQLMELAGLSVASAIHDFLAQPTRSA-----SILILCGPGNNGGDGLVAARHLYHFGYRPVVVYPKRPARPLFTNLVKQCEDLGIHVGVDMPED--IEAKFDCVVDALFGFGTAGPLRAPFGEMMQVLSKLTTPIVSVDIPSGWDVEAGDVYGTGFTPDALVSLTAPKKCAALFRGR-HYLGGRFVPPGLQHQYGLDALPAYPGTCQCV 339
SNN C AA S+ Q I L Q+EAQ IDEEL GFSVDQLMELAGLS A+A+ A P S S+L++CGPGNNGGDGLV ARHL FGY P ++YPKRP +PLF L QC+ + I +MPE I+ ++ V+DA+FGF G +R PFG ++ VL K T PI S+DIPSGWDVE G G PD L+SLTAPKK A+LFRGR H+LGGRFVPPGL+ +Y L+ LP YPGT CV
Sbjct: 34 SNNHKRDCFSGRAA-STMAQTIKYLGQEEAQHIDEELFSEYGFSVDQLMELAGLSCATAVTK--AYPVTSLVKAKPSLLVICGPGNNGGDGLVCARHLKLFGYEPTILYPKRPNKPLFQGLTTQCQKMEIPFLTEMPEAKIIDEAYNLVIDAIFGFSFKGAVREPFGSILDVLKKTTVPIASIDIPSGWDVEQGS--ADGLQPDMLISLTAPKKSASLFRGRYHFLGGRFVPPGLERKYQLN-LPQYPGT-DCV 280
BLAST of EWM28046.1 vs. NCBI_GenBank
Match: gi|1018580982|gb|AMY62077.1| (apolipoprotein A-I, partial [Siniperca chuatsi]) HSP 1 Score: 263.077 bits (671), Expect = 3.446e-81 Identity = 142/254 (55.91%), Postives = 170/254 (66.93%), Query Frame = 0
Query: 94 SNNMGDPCKGSDAAVSSWRQRITLLTQKEAQAIDEELMGTPGFSVDQLMELAGLSVASAIHDFLAQPTRSA-----SILILCGPGNNGGDGLVAARHLYHFGYRPVVVYPKRPARPLFTNLVKQCEDLGIHVGVDMPED--IEAKFDCVVDALFGFGTAGPLRAPFGEMMQVLSKLTTPIVSVDIPSGWDVEAGDVYGTGFTPDALVSLTAPKKCAALFRGR-HYLGGRFVPPGLQHQYGLDALPAYPGTCQCV 339
+NN C S A S+ Q I L Q+EAQ IDEEL GFSVDQLMELAGLS A+AI A P S S+L++CGPGNNGGDGLV ARHL FGY P ++YPKRP +PLF L QC+ + I +MPED I+ ++ V+DA+FGF G +R PFG ++ VL K T PI S+DIPSGWDVE G G PD L+SLTAPKK A+LFRGR H+LGGRFVPP L+ +Y L+ LP YPGT CV
Sbjct: 34 ANNHKKDCFSSRPA-STMAQTIKYLGQEEAQHIDEELFSEYGFSVDQLMELAGLSCATAITR--AYPVTSLVKARPSLLVICGPGNNGGDGLVCARHLKLFGYEPTILYPKRPNKPLFQGLTTQCQKMEIPFLTEMPEDKVIDEAYNLVIDAIFGFSFKGAVREPFGSILSVLKKTTVPIASIDIPSGWDVEQGS--ADGLQPDMLISLTAPKKSASLFRGRYHFLGGRFVPPDLERKYQLN-LPQYPGT-DCV 280
BLAST of EWM28046.1 vs. NCBI_GenBank
Match: gi|551677514|ref|XP_005841510.1| (hypothetical protein GUITHDRAFT_156874 [Guillardia theta CCMP2712] >gi|428185678|gb|EKX54530.1| hypothetical protein GUITHDRAFT_156874 [Guillardia theta CCMP2712]) HSP 1 Score: 260.381 bits (664), Expect = 8.297e-81 Identity = 128/224 (57.14%), Postives = 161/224 (71.88%), Query Frame = 0
Query: 113 QRITLLTQKEAQAIDEELMGTPGFSVDQLMELAGLSVASAIHDFLAQPTRSASILILCGPGNNGGDGLVAARHLYHFGYRPVVVYPKRPARPLFTNLVKQCEDLGIHVGVDMP--EDIEAKFDCVVDALFGFGTAGPLRAPFGEMMQVLSKLTTPIVSVDIPSGWDVEAGDVYGTGFTPDALVSLTAPKKCAALFRGRHYLGGRFVPPGLQHQYGLDALPAYPG 334
Q + L +A IDE+LMG GFS+DQLMELAGLSVA+A ++ AQ + IL++CGPGNNGGDGLVAARHLYHFGY+PVV YPK+ A+PL+ LV Q L + V ++P E IE FD VVDA+FGF G +RAPF +++ L K++ PIVSVD+PSGWDV G+ G G P L+SLTAPK CA F+G H+LGGRFVPP ++ ++GL LP YPG
Sbjct: 6 QDLAFLEASKAAEIDEKLMGPLGFSIDQLMELAGLSVATATSEYCAQNLQR--ILVVCGPGNNGGDGLVAARHLYHFGYKPVVCYPKQTAKPLYQGLVTQLASLDVPVLQELPSAEAIERDFDVVVDAIFGFSFKGEIRAPFADIISTLKKISKPIVSVDVPSGWDVNEGNKGGVGLEPAVLISLTAPKLCAKHFKGHHFLGGRFVPPAIRDEFGLK-LPTYPG 226
BLAST of EWM28046.1 vs. NCBI_GenBank
Match: gi|657804387|ref|XP_008329312.1| (PREDICTED: NAD(P)H-hydrate epimerase [Cynoglossus semilaevis] >gi|657804389|ref|XP_008329313.1| PREDICTED: NAD(P)H-hydrate epimerase [Cynoglossus semilaevis] >gi|1035256958|ref|XP_016896445.1| PREDICTED: NAD(P)H-hydrate epimerase [Cynoglossus semilaevis]) HSP 1 Score: 261.536 bits (667), Expect = 1.571e-80 Identity = 145/268 (54.10%), Postives = 176/268 (65.67%), Query Frame = 0
Query: 78 GTCRSFSGVPLHSDSNSNNMGDPCKGSDAAVSSWRQRITLLTQKEAQAIDEELMGTPGFSVDQLMELAGLSVASAI---HDFLAQPTRSASILILCGPGNNGGDGLVAARHLYHFGYRPVVVYPKRPARPLFTNLVKQCEDLGIHVGVDMPED--IEAKFDCVVDALFGFGTAGPLRAPFGEMMQVLSKLTTPIVSVDIPSGWDVEAGDVYGTGFTPDALVSLTAPKKCAALFRGR-HYLGGRFVPPGLQHQYGLDALPAYPGTCQCV 339
GTC VP S+ + C S A S+ Q I L Q+EAQ IDEEL GFSVDQLMELAGLS A+AI + + S+L++CGPGNNGGDGLV ARHL FGY P ++YPKRP +PLF L QC+ + + +MPE I+ ++ VVDA+FGF G +R PFG +++VL+K T PI SVDIPSGWDVE G V G PD L+SLTAPKK A FRGR H+LGGRFVPPGL+ +YGL+ LP YPGT CV
Sbjct: 26 GTC----SVPASSNGPTKT---SCVSSRPA-STMAQTIKYLGQEEAQHIDEELFTEYGFSVDQLMELAGLSCATAITRGYPLTSLVKPRPSVLVVCGPGNNGGDGLVCARHLKLFGYEPTIIYPKRPNKPLFQGLTTQCQKMELSFLTEMPEAAVIDEAYNLVVDAIFGFSFKGAVREPFGSILEVLNKTTVPIASVDIPSGWDVERGSV--DGLQPDMLISLTAPKKSALQFRGRYHFLGGRFVPPGLERKYGLN-LPQYPGT-DCV 281
BLAST of EWM28046.1 vs. NCBI_GenBank
Match: gi|1143411500|ref|XP_019959953.1| (PREDICTED: NAD(P)H-hydrate epimerase [Paralichthys olivaceus]) HSP 1 Score: 261.536 bits (667), Expect = 2.032e-80 Identity = 145/272 (53.31%), Postives = 175/272 (64.34%), Query Frame = 0
Query: 76 KGGTCRSFSGVPLHSDSNSNNMGDPCKGSDAAVSSWRQRITLLTQKEAQAIDEELMGTPGFSVDQLMELAGLSVASAIHDFLAQPTRSA-----SILILCGPGNNGGDGLVAARHLYHFGYRPVVVYPKRPARPLFTNLVKQCEDLGIHVGVDMPED--IEAKFDCVVDALFGFGTAGPLRAPFGEMMQVLSKLTTPIVSVDIPSGWDVEAGDVYGTGFTPDALVSLTAPKKCAALFRGR-HYLGGRFVPPGLQHQYGLDALPAYPGTCQCV 339
+ GTC PL + +N + A S+ Q I L Q+EAQ IDEEL GFSVDQLMELAGLS A+AI A P S S+L++CGPGNNGGDGLV ARHL FGY P V+YPKRP +PLF L QC+ + I +MPE I+ ++ V+DA+FGF G +R PFG ++ VL K T PI S+DIPSGWDVE G G PD L+SLTAPKK A+LFRGR H+LGGRFVPPGL+ +Y L+ LP YPGT CV
Sbjct: 36 QTGTC------PLAAAANDQQRN---RFRSRAASTMAQSIKYLGQEEAQHIDEELFSEYGFSVDQLMELAGLSCATAITR--AYPITSLVKARPSLLVICGPGNNGGDGLVCARHLKLFGYEPTVLYPKRPNKPLFQGLTTQCQKMEIPFLTEMPEAQLIDEAYNLVIDAIFGFSFKGAVREPFGSILDVLEKTTVPIASIDIPSGWDVEQGS--ADGLQPDMLISLTAPKKSASLFRGRYHFLGGRFVPPGLERKYQLN-LPQYPGT-DCV 292
BLAST of EWM28046.1 vs. NCBI_GenBank
Match: gi|1079715510|ref|XP_018555066.1| (PREDICTED: LOW QUALITY PROTEIN: NAD(P)H-hydrate epimerase [Lates calcarifer]) HSP 1 Score: 259.61 bits (662), Expect = 8.788e-80 Identity = 141/254 (55.51%), Postives = 169/254 (66.54%), Query Frame = 0
Query: 94 SNNMGDPCKGSDAAVSSWRQRITLLTQKEAQAIDEELMGTPGFSVDQLMELAGLSVASAIHDFLAQPTRSA-----SILILCGPGNNGGDGLVAARHLYHFGYRPVVVYPKRPARPLFTNLVKQCEDLGIHVGVDMPED--IEAKFDCVVDALFGFGTAGPLRAPFGEMMQVLSKLTTPIVSVDIPSGWDVEAGDVYGTGFTPDALVSLTAPKKCAALFRGR-HYLGGRFVPPGLQHQYGLDALPAYPGTCQCV 339
+NN C S A S+ Q I L Q+EAQ IDEEL GFSVDQLMELAGLS A+AI A P S S+L++CGPGNNGGDGLV ARHL FGY P ++YPKRP +PLF L QC+ + I +MPE I+ ++ V+DA+FGF G +R PFG ++ L K T PI S+DIPSGWDVE G G PD L+SLTAPKK A+LFRGR H+LGGRFVPPGL+ +Y L+ LP YPGT CV
Sbjct: 34 ANNHKKDCFSSRPA-STMAQTIKYLGQEEAQHIDEELFSEYGFSVDQLMELAGLSCATAITR--AYPVTSLVKARPSLLVICGPGNNGGDGLVCARHLKLFGYEPTILYPKRPNKPLFQGLTTQCQKMEIPFLTEMPEAQVIDEAYNLVIDAIFGFSFKGAVREPFGSILDNLKKTTVPIASIDIPSGWDVEQGS--ADGLQPDMLISLTAPKKSASLFRGRYHFLGGRFVPPGLERKYQLN-LPQYPGT-DCV 280 The following BLAST results are available for this feature:
BLAST of EWM28046.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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