EWM28078.1, cds2594 (CDS) Nannochloropsis gaditana

Overview
NameEWM28078.1
Unique Namecds2594
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002459.1:764103..764516 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM28078.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100120g2.6939.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:764103..764516 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM28078.1 vs. NCBI_GenBank
Match: gi|585110421|gb|EWM28078.1| (hypothetical protein Naga_100120g2 [Nannochloropsis gaditana])

HSP 1 Score: 285.034 bits (728), Expect = 1.689e-97
Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 0 
Query:    1 MLSASLLNCLSGAEAVMKAPPSHGAISACAAETDRMRGQDACFRCWRCRNSAQKSSCMTDDLTAAGRIKEQSAGHISCPPEVQEFQVEAVYYFCHLSDSEASRRSFLVEMQPTEEVGMLARPATCAFGRDRFPPTNL 137
            MLSASLLNCLSGAEAVMKAPPSHGAISACAAETDRMRGQDACFRCWRCRNSAQKSSCMTDDLTAAGRIKEQSAGHISCPPEVQEFQVEAVYYFCHLSDSEASRRSFLVEMQPTEEVGMLARPATCAFGRDRFPPTNL
Sbjct:    1 MLSASLLNCLSGAEAVMKAPPSHGAISACAAETDRMRGQDACFRCWRCRNSAQKSSCMTDDLTAAGRIKEQSAGHISCPPEVQEFQVEAVYYFCHLSDSEASRRSFLVEMQPTEEVGMLARPATCAFGRDRFPPTNL 137
The following BLAST results are available for this feature:
BLAST of EWM28078.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585110421|gb|EWM28078.1|1.689e-97100.00hypothetical protein Naga_100120g2 [Nannochloropsi... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2602rna2602Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications