EWM28087.1, cds2590 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28087.1 vs. NCBI_GenBank
Match: gi|585110430|gb|EWM28087.1| (pyridoxamine 5 -phosphate oxidase-related fmn-binding protein [Nannochloropsis gaditana]) HSP 1 Score: 753.051 bits (1943), Expect = 0.000e+0 Identity = 369/369 (100.00%), Postives = 369/369 (100.00%), Query Frame = 0
Query: 1 MRRPTLSSWVAVNALVLPAVHAFFSAPLRSLSPPPCRALSSSPSSRLQAAATVSPTQASPSTASQNSGGNAAQQQQTGRVEPSPSPPAGDGIGGARPIRLSLSERARTVTYVATAATLGTFSEAASTPFGSYVDYILDDKGWPVLLLSEQSLHTQNIRVNPQVSLFVQMPRSGKADAASAALSRVTLIGSIVPVEAEELPAIRTAYSIVHSYSERLVESPKFSFCKLKPERVYFVGGFGVQSKWLEVSDYEAAVPDVLAHEMARIVARINQEHEPELRLMCRHFLGARDVDQVTATTVDRLGIDLRVTTGELTDEYRVGFREKVVSTEDAKSELVKMFQEAWEREHDYAWTDELPPVIRYAEDILRKKG 369
MRRPTLSSWVAVNALVLPAVHAFFSAPLRSLSPPPCRALSSSPSSRLQAAATVSPTQASPSTASQNSGGNAAQQQQTGRVEPSPSPPAGDGIGGARPIRLSLSERARTVTYVATAATLGTFSEAASTPFGSYVDYILDDKGWPVLLLSEQSLHTQNIRVNPQVSLFVQMPRSGKADAASAALSRVTLIGSIVPVEAEELPAIRTAYSIVHSYSERLVESPKFSFCKLKPERVYFVGGFGVQSKWLEVSDYEAAVPDVLAHEMARIVARINQEHEPELRLMCRHFLGARDVDQVTATTVDRLGIDLRVTTGELTDEYRVGFREKVVSTEDAKSELVKMFQEAWEREHDYAWTDELPPVIRYAEDILRKKG
Sbjct: 1 MRRPTLSSWVAVNALVLPAVHAFFSAPLRSLSPPPCRALSSSPSSRLQAAATVSPTQASPSTASQNSGGNAAQQQQTGRVEPSPSPPAGDGIGGARPIRLSLSERARTVTYVATAATLGTFSEAASTPFGSYVDYILDDKGWPVLLLSEQSLHTQNIRVNPQVSLFVQMPRSGKADAASAALSRVTLIGSIVPVEAEELPAIRTAYSIVHSYSERLVESPKFSFCKLKPERVYFVGGFGVQSKWLEVSDYEAAVPDVLAHEMARIVARINQEHEPELRLMCRHFLGARDVDQVTATTVDRLGIDLRVTTGELTDEYRVGFREKVVSTEDAKSELVKMFQEAWEREHDYAWTDELPPVIRYAEDILRKKG 369
BLAST of EWM28087.1 vs. NCBI_GenBank
Match: gi|299117082|emb|CBN73853.1| (Pyridoxamine 5'-phosphate oxidase-related [Ectocarpus siliculosus]) HSP 1 Score: 325.865 bits (834), Expect = 2.535e-107 Identity = 158/293 (53.92%), Postives = 215/293 (73.38%), Query Frame = 0
Query: 80 VEPSPSPPAGDGIGGARPIRLSLSERARTVTYVATAATLGTFSEAA-----STPFGSYVDYILDDKGWPVLLLSEQSLHTQNIRVNPQVSLFVQMPRSGKADAASAALSRVTLIGSIVPVEAE-ELPAIRTAYSIVHSYSERLVESPKFSFCKLKPERVYFVGGFGVQSKWLEVSDYEAAVPDVLAHEMARIVARINQEHEPELRLMCRHFLGARDVDQVTATTVDRLGIDLRVTTGELTDEYRVGFREKVVSTEDAKSELVKMFQEAWEREHDYAWTDELPPVIRYAEDILR 366
V SP+ AG G R I LS++ERARTVT+VA + TL T S + +PFGS+VDY+LD++GWP+ LL+E SLHTQNI+ + +VSL Q PR AAL+RVTL+G+IV V+ + EL ++ ++S+VH+Y+++L +SP+F F KLKP++VY+VGGFGV SKWL VS+YE A PD+LA E + IV++IN + +L+ +C+HFL D V TTVDRLG+DLRV +LTDE+R+GFR+ V S EDAKSE+VK+FQEAWE+E+ + W D+ PP+ RYAEDILR
Sbjct: 6 VASSPTEAAG-ATDGERAIILSITERARTVTHVADSGTLCTLSSSGEAGPEGSPFGSHVDYVLDEQGWPIFLLAEASLHTQNIKASNRVSLLCQTPREANGQP-QAALARVTLVGAIVDVDDDDELIQLKASFSLVHTYADQLTQSPRFKFYKLKPDKVYYVGGFGVLSKWLPVSEYETAEPDILADEASSIVSKINNGKQEDLQTVCKHFLNKATPDTVAVTTVDRLGLDLRVKARDLTDEFRIGFRQPVSSVEDAKSEIVKIFQEAWEKENGFEWEDQGPPIQRYAEDILR 296
BLAST of EWM28087.1 vs. NCBI_GenBank
Match: gi|397610805|gb|EJK61026.1| (hypothetical protein THAOC_18545 [Thalassiosira oceanica]) HSP 1 Score: 251.521 bits (641), Expect = 2.414e-77 Identity = 134/290 (46.21%), Postives = 191/290 (65.86%), Query Frame = 0
Query: 98 IRLSLSERARTVTYVATAATLGT---FSEAASTPFGSYVDYILDDKGWPVLLLSEQSLHTQNIRVNPQ---VSLFVQM--PRSGKADAASAALSRVTLIGSIVPVE--AEELPAIRTAYSIVHSYSERLVESPKFSFCKLKPERVYFVGGFGVQSKWLEVSDYEAAVPDVLAHEMARIVARINQEHEPELRLMCRHFLGARDVDQVTATTVDRLGIDLRVTT-------GELTDEYRVGFREKVVSTEDAKSELVKMFQEAWEREHDYAW-TDELP----PVIRYAEDIL 365
IRL++ E+ARTVT V T+ TL T + PFGS+VDY+LDD G PVLL++E S+HT NI+ + V+LF Q+ P S A +SR ++ G+I +E AE+ IR Y I H+Y++++++SPKF F +L P ++YFVGGFGV S+W+ +Y AA PD+LA E +RI+ R+N++H +L L L +V++V T VDRLG+D+RVT+ LTDE+RVGFR V+S EDAKSE++K+FQEAWE+++ W DE+P PV++ AED L
Sbjct: 74 IRLNVPEKARTVTSVCTSGTLCTQSYMDDIEGAPFGSFVDYVLDDNGNPVLLMNEMSMHTVNIQKAGEGVLVTLFAQLGGPTSSGQPAHGQDVSRCSITGTIAKIEPTAEDWDVIRMRYGIAHTYADQVMDSPKFHFYRLVPTKIYFVGGFGVSSEWVPPEEYTAATPDILAKESSRIMGRLNRDHAEDLLLTATEILDVNEVEKVRVTGVDRLGMDMRVTSRVPRRKNKLLTDEFRVGFRIPVISVEDAKSEILKVFQEAWEKKNGVTWGDDEIPGADVPVLKTAEDNL 363
BLAST of EWM28087.1 vs. NCBI_GenBank
Match: gi|223997178|ref|XP_002288262.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220975370|gb|EED93698.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 245.743 bits (626), Expect = 3.607e-75 Identity = 131/291 (45.02%), Postives = 194/291 (66.67%), Query Frame = 0
Query: 98 IRLSLSERARTVTYVATAATLGTFS---EAASTPFGSYVDYILDDKGWPVLLLSEQSLHTQNI-RVNPQ--VSLFVQM--PRSGKADAASAA-LSRVTLIGSIVPVE--AEELPAIRTAYSIVHSYSERLVESPKFSFCKLKPERVYFVGGFGVQSKWLEVSDYEAAVPDVLAHEMARIVARINQEHEPELRLMCRHFLGARDVDQVTATTVDRLGIDLRVTTGE-------LTDEYRVGFREKVVSTEDAKSELVKMFQEAWEREHDYAWTDE-LP----PVIRYAEDIL 365
IRL++ E+ARTV V T+ TL T S + PFGS+VDY+LDDKG PVLL++E S+HT NI + P+ V+LF Q+ P S A +SR ++ G+I +E AE+ AIR Y I H+Y++++++SPKF F +L P+++Y+VGGFGV S+W+ +Y A PD+LA + + I+ R+N++H +L L L ++VD+V T VDRLG+D+RVT + +TDE+RVGFR V+S EDAKSE++K+FQEAWE+++ W D+ +P P+++ AED L
Sbjct: 61 IRLNVPEKARTVISVCTSGTLCTASHMDDIQGAPFGSFVDYVLDDKGNPVLLMNEMSMHTVNIQKSGPEGLVTLFAQLGGPTSSSGVATQGQDVSRCSVTGTIEKIEDTAEDWDAIRMRYGIAHTYADQVMDSPKFHFYRLSPKKIYYVGGFGVSSEWVPPEEYSEATPDILAKDASGIMTRLNRDHAEDLMLTATQILEVKEVDKVRVTGVDRLGMDMRVTCRDPRRKSKLITDEFRVGFRIPVISVEDAKSEVLKVFQEAWEKKNGVTWGDDAVPGADIPMLKTAEDSL 351
BLAST of EWM28087.1 vs. NCBI_GenBank
Match: gi|1210523799|dbj|GAX17481.1| (hypothetical protein FisN_5Hh133 [Fistulifera solaris]) HSP 1 Score: 241.121 bits (614), Expect = 4.213e-73 Identity = 137/317 (43.22%), Postives = 196/317 (61.83%), Query Frame = 0
Query: 98 IRLSLSERARTVTYVATAATLGTFSEAAS---TPFGSYVDYILDDKGWPVLLLSEQSLHTQNIRV---------NP--QVSLFVQM----------PRSGKADAASAA------LSRVTLIGSI--VPVEAEELPAIRTAYSIVHSYSERLVESPKFSFCKLKPERVYFVGGFGVQSKWLEVSDYEAAVPDVLAHEMARIVARINQEHEPELRLMCRHFL-----GARDVDQVTATTVDRLGIDLRVTTGE-------LTDEYRVGFREKVVSTEDAKSELVKMFQEAWEREHDYAWTD-ELP----PVIRYAEDIL 365
IRL++ E+ARTVT V T+ TL T S +PFGS+VDY+LDD G PV L++E S+HT NI+ NP V+LF Q+ P G +++ +SR +L G + + V+A ++ AIR YSI H Y++++++SPKF+F +L P+++YFVGGFGV S W++ DY+ A PD+LA + A I ARIN++H+ +LRL +H L A ++ V TTVDRLG+DLRVT + TDE+R+GFR V S EDAKSE++K+FQEAWE+ + W D E+P P+++ A D L
Sbjct: 58 IRLNVYEKARTVTSVCTSGTLCTISSHEGIDGSPFGSFVDYVLDDDGNPVFLMNEMSMHTINIKNAQQRMKDDNNPSAMVTLFTQLGGNTNNNHDGPSFGPGSSSNLGNKGLQDVSRCSLTGRLEKLTVDAPDMDAIRMRYSITHVYADQVMDSPKFAFYRLIPDKIYFVGGFGVLSTWVDPEDYKNANPDILATQAAGICARINRDHDEDLRLTAQHLLNIAPKNADAIESVRVTTVDRLGMDLRVTAQQGTRRNKLQTDEFRIGFRIPVQSVEDAKSEILKIFQEAWEKGNGVEWGDNEVPGESVPIMKIAADSL 374
BLAST of EWM28087.1 vs. NCBI_GenBank
Match: gi|219126423|ref|XP_002183457.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217405213|gb|EEC45157.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 239.195 bits (609), Expect = 6.814e-72 Identity = 130/299 (43.48%), Postives = 184/299 (61.54%), Query Frame = 0
Query: 98 IRLSLSERARTVTYVATAATLGTFS---EAASTPFGSYVDYILDDKGWPVLLLSEQSLHTQNIRVNPQ----------------VSLFVQM---------PRSGKADAASAA-------LSRVTLIGS---IVPVEAEELPAIRTAYSIVHSYSERLVESPKFSFCKLKPERVYFVGGFGVQSKWLEVSDYEAAVPDVLAHEMARIVARINQEHEPELRLMCRHFLGARD-VDQVTATTVDRLGIDLRVTTGE-------LTDEYRVGFREKVVSTEDAKSELVKMFQEAWEREHDYAW 350
IRL++SE+ARTVT V + TL T S A PFGS+VDY+LDD+G PVLL++E S+HT NI+ Q V+LF Q+ PR+ A+ A +SR +L G+ I P ++ AIR YS+ H+Y++++++SPKF+F +L PE++YFVGGFGV +KW++ DY AA PD+LA E + IVA++N+EH +L+ RH L ++ + T VDRLG+DLRVT+ + TDE+R+GFR V+S EDAKSE++K FQEAWE + W
Sbjct: 93 IRLNVSEKARTVTSVCVSGTLCTVSVHEGIAGAPFGSFVDYVLDDQGNPVLLMNEMSMHTINIQNAAQTLLDASGTAIGPGPSMVTLFTQLGSGTTSLSPPRTAAGGASGTAKSNNLQDVSRCSLTGTLYKIDPAVDSDVDAIRMRYSLTHTYADQVMDSPKFAFYRLVPEKIYFVGGFGVMAKWVDPEDYAAAAPDILAKEASAIVAKLNREHGEDLQNTARHLLRVETPLEDIRVTNVDRLGVDLRVTSQKGSRRNKLQTDEFRIGFRIPVISVEDAKSEILKTFQEAWEIGNGMDW 391
BLAST of EWM28087.1 vs. NCBI_GenBank
Match: gi|1210527325|dbj|GAX13960.1| (hypothetical protein FisN_5Lh133 [Fistulifera solaris]) HSP 1 Score: 237.654 bits (605), Expect = 1.023e-71 Identity = 135/317 (42.59%), Postives = 194/317 (61.20%), Query Frame = 0
Query: 98 IRLSLSERARTVTYVATAATLGTFSE---AASTPFGSYVDYILDDKGWPVLLLSEQSLHTQNIRV---------NP--QVSLFVQM----------PRSGKADAASAA------LSRVTLIGSI--VPVEAEELPAIRTAYSIVHSYSERLVESPKFSFCKLKPERVYFVGGFGVQSKWLEVSDYEAAVPDVLAHEMARIVARINQEHEPELRLMCRHFL-----GARDVDQVTATTVDRLGIDLRVTTGE-------LTDEYRVGFREKVVSTEDAKSELVKMFQEAWEREHDYAWTD-ELP----PVIRYAEDIL 365
IRL++ E+ARTVT V T+ TL T S +PFGS+VDY+LDD G PV L++E S+HT NI+ NP V+LF Q+ P G +++ +SR +L G + + +A ++ AIR YSI H Y++++++SPKF+F +L P+++YFVGGFGV S W++ DY+ A PD+LA + A I ARIN++H+ +LR +H L A ++ V TTVDRLG+DLRVT + TDE+R+GFR V S EDAKSE++K+FQEAWE+ + W D E+P P+++ A D L
Sbjct: 60 IRLNVYEKARTVTSVCTSGTLCTISSHEGIDGSPFGSFVDYVLDDDGNPVFLMNEMSMHTINIKNAQQRMKDDNNPAAMVTLFTQLGGNTNNNNDGPSFGPGSSSNLGNKGLQDVSRCSLTGRLEKLTADAPDMDAIRMRYSITHVYADQVMDSPKFAFYRLIPDKIYFVGGFGVLSTWVDPEDYKNANPDILATQAAGICARINRDHDEDLRFTAQHLLNIAPKNADAIESVRVTTVDRLGMDLRVTAQQGTRRNKLQTDEFRIGFRIPVQSVEDAKSEILKIFQEAWEKGNGVEWGDNEVPGESVPIMKIAADSL 376
BLAST of EWM28087.1 vs. NCBI_GenBank
Match: gi|1072235244|gb|OEU19973.1| (hypothetical protein FRACYDRAFT_167870 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 232.261 bits (591), Expect = 1.494e-69 Identity = 117/282 (41.49%), Postives = 174/282 (61.70%), Query Frame = 0
Query: 98 IRLSLSERARTVTYVATAATLGTFSE---AASTPFGSYVDYILDDKGWPVLLLSEQSLHTQNIRVNPQ------------VSLFVQMPRSGKADAASAALSRVTLIGSIVPVEAEELPAIRTAYSIVHSYSERLVESPKFSFCKLKPERVYFVGGFGVQSKWLEVSDYEAAVPDVLAHEMARIVARINQEHEPELRLMCRHFLGARDVDQVTATTVDRLGIDLRVTTGE-------LTDEYRVGFREKVVSTEDAKSELVKMFQEAWEREHDYAWTD-ELPP 356
+RL+++E+ARTV V T+ TL T S PFGSYVDY+LDD G PVLL+++ S+HT NI N V+LF Q+ + + T +P ++ ++ +R YSI H Y++++++SP FSF +L PE++YFVGGFGV +KW+++ DY+ A PD+L+ + A IV ++N+E +L M H LG ++ + T VDRLG+D+RVT + +TDEYR+GFR V+S EDAKSE++K+FQE+WE+ W D + PP
Sbjct: 93 LRLNVNEKARTVASVCTSGTLCTVSGHEGIQGAPFGSYVDYVLDDGGNPVLLMNDMSMHTINIEQNALNNEDGSNGASNLVTLFTQLASDTSEQSQDVSRCSFTCKVEKIPDDSPDMDILRMRYSITHVYADQVMDSPIFSFYRLVPEKIYFVGGFGVIAKWVDIGDYKNAAPDILSKDAAIIVKKLNREFTEDLEGMATHLLGVDKLEYIRVTNVDRLGMDVRVTRQQGTRRNKLMTDEYRIGFRIPVISVEDAKSEILKVFQESWEKGEGVDWGDADTPP 374
BLAST of EWM28087.1 vs. NCBI_GenBank
Match: gi|1189381950|gb|OSX69562.1| (hypothetical protein BU14_1393s0002 [Porphyra umbilicalis]) HSP 1 Score: 199.134 bits (505), Expect = 7.560e-57 Identity = 113/274 (41.24%), Postives = 161/274 (58.76%), Query Frame = 0
Query: 99 RLSLSERARTVTYVATAATLGTFS-EAASTPFGSYVDYILDDKGWPVLLLSEQSLHTQNIRVNPQVSLFVQMPRSGKADAASAALSRVTLIGSIVPVEAEE---------LPAIRTAYSIVHSYSERLVESP-KFSFCKLKPERVYFVGGFGVQSKWLEVSDYEAAVPDVLAHEMARIVARINQEHEPELRLMCRHFLGARDVDQVTATTVDRLGIDLR-VTTGELTDEYRVGFREKVVSTEDAKSELVKMFQEAWEREHDY--AWTDELPPVI 358
RL++ ERARTV +V TL T S + PFGS+VDY+LD G PV+LL+ + H++N+ + VSL+ Q P+ R TL+G + P+ A + + + AY+ H ++ + + P +F+F ++ E VYFVGGFGV + W+ V DY A D LA + +V+ N+ + ELR MCR FLG D + VT +DRLG+DLR VTT T E+RV FREKV DA+S LVK QE+WE+E+ + AW +E P V+
Sbjct: 107 RLTVGERARTVVHVCRTGTLSTSSVKHGGVPFGSHVDYVLDGAGRPVMLLAVDAAHSKNLVESNMVSLYAQ-PQESSGQGGC----RATLVGRLAPLAAADGVDGADEEEVAELVEAYTERHPHAAKALTYPDRFNFFRMSVEDVYFVGGFGVTATWVAVEDYSNASADPLAFDAPSMVSTTNKRQQKELRSMCRVFLGVDDAETVTMMALDRLGVDLRVVTTSGATSEFRVAFREKVACRFDAQSALVKALQESWEKENGFGDAWEEETPRVV 375
BLAST of EWM28087.1 vs. NCBI_GenBank
Match: gi|545709221|ref|XP_005706921.1| (FMN binding protein [Galdieria sulphuraria] >gi|452823390|gb|EME30401.1| FMN binding protein [Galdieria sulphuraria]) HSP 1 Score: 197.593 bits (501), Expect = 1.496e-56 Identity = 110/270 (40.74%), Postives = 165/270 (61.11%), Query Frame = 0
Query: 98 IRLSLSERARTVTYVATAATLGTFS-EAASTPFGSYVDYILDDKGWPVLLLSEQSLHTQNIRVNPQVSLFVQ-MPRSGKADAASAALSRVTLIGSIVPVEAEELPAIRTAYSIVHSYSERLVESPKFSFCKLKPERVYFVGGFGVQSKWLEVSDYEAAVPDVLAHEMARIVARINQEHEPELRLMCRHFLGARDVDQVTATTVDRLGIDLRVTTGELTD--EYRVGFREKVVSTEDAKSELVKMFQEAWEREHDYA--WTDELP-PVIRY 360
RLS E+ARTV V TL T S E TPFGS+VDYILDD G P++LL++ + H +N+R + + SLF Q + SG++ R TL+G +V + E++ + AY H ++ ++ P+FSF +++ VYFVGG+GV + W++ +Y ++ PD LA + ++ +N +H +L C FL ++++Q VDRLG D+RV E TD EYR+GFRE VV++ DA+S LV+ QEAWE E+ Y W++E P P + Y
Sbjct: 91 FRLSFGEQARTVVQVCKTGTLCTSSVEHDDTPFGSHVDYILDDFGRPIVLLAQNAAHMRNLRKSQKCSLFCQPVASSGQSGC------RATLVGFMVKLPLEQVSEVMEAYIDTHPHAAIALKYPEFSFYRMEVCDVYFVGGYGVAATWVDPKEYISSEPDPLAFQSQDLLKLMNSDHMEDLLRFCNVFLHLKNIEQCEIVMVDRLGFDMRVQLSE-TDIREYRIGFREHVVTSLDAQSALVQAMQEAWELENGYEKLWSEETPRPAVLY 353 The following BLAST results are available for this feature:
BLAST of EWM28087.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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