EWM30409.1, cds259 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM30409.1 vs. NCBI_GenBank
Match: gi|585113069|gb|EWM30409.1| (pyrroline-5-carboxylate reductase [Nannochloropsis gaditana]) HSP 1 Score: 726.087 bits (1873), Expect = 0.000e+0 Identity = 351/351 (100.00%), Postives = 351/351 (100.00%), Query Frame = 0
Query: 1 MLPTRLAGIAARRAFLMQRHIPSNANTTAMSATVRWIHRSQAALSHDDSKPDPVANAEGFDFNRIGLVGGGKMSEAIIEGFVTEKLIQPEKISVYDVSRKRLDYLMKTFGVQASSSLAAACKDSDLVIIAVKPQNLTQKLWTQLRANLDPKSVVLSIVAGIPMSNFVESTGNKRVVRTMPNTPATIQQGMTVWACTDHVSVSQRNSVAKFLSSLGEQHFVHDEQYLDMATAVSGSGPGYVLLILEALIDAAVHLGFARNVASKLVLQTVSGTTTLAMKSGLHPAILRNSVTSPGGTTASALYVLEQGRFRTVLADSFWSAYRRSLELGHMDSNVGPGRSRHDAHETDSHKK 351
MLPTRLAGIAARRAFLMQRHIPSNANTTAMSATVRWIHRSQAALSHDDSKPDPVANAEGFDFNRIGLVGGGKMSEAIIEGFVTEKLIQPEKISVYDVSRKRLDYLMKTFGVQASSSLAAACKDSDLVIIAVKPQNLTQKLWTQLRANLDPKSVVLSIVAGIPMSNFVESTGNKRVVRTMPNTPATIQQGMTVWACTDHVSVSQRNSVAKFLSSLGEQHFVHDEQYLDMATAVSGSGPGYVLLILEALIDAAVHLGFARNVASKLVLQTVSGTTTLAMKSGLHPAILRNSVTSPGGTTASALYVLEQGRFRTVLADSFWSAYRRSLELGHMDSNVGPGRSRHDAHETDSHKK
Sbjct: 1 MLPTRLAGIAARRAFLMQRHIPSNANTTAMSATVRWIHRSQAALSHDDSKPDPVANAEGFDFNRIGLVGGGKMSEAIIEGFVTEKLIQPEKISVYDVSRKRLDYLMKTFGVQASSSLAAACKDSDLVIIAVKPQNLTQKLWTQLRANLDPKSVVLSIVAGIPMSNFVESTGNKRVVRTMPNTPATIQQGMTVWACTDHVSVSQRNSVAKFLSSLGEQHFVHDEQYLDMATAVSGSGPGYVLLILEALIDAAVHLGFARNVASKLVLQTVSGTTTLAMKSGLHPAILRNSVTSPGGTTASALYVLEQGRFRTVLADSFWSAYRRSLELGHMDSNVGPGRSRHDAHETDSHKK 351
BLAST of EWM30409.1 vs. NCBI_GenBank
Match: gi|1210513165|dbj|GAX27562.1| (pyrroline-5-carboxylate reductase [Fistulifera solaris]) HSP 1 Score: 288.5 bits (737), Expect = 2.695e-92 Identity = 134/280 (47.86%), Postives = 196/280 (70.00%), Query Frame = 0
Query: 62 FNRIGLVGGGKMSEAIIEGFVTEKLIQPEKISVYDVSRKRLDYLMKTFGVQASSSLAAACKDSDLVIIAVKPQNLTQKLWTQLR-ANLDPKSVVLSIVAGIPMSNFVESTGNKRVVRTMPNTPATIQQGMTVWACTDHVSVSQRNSVAKFLSSLGEQHFVHDEQYLDMATAVSGSGPGYVLLILEALIDAAVHLGFARNVASKLVLQTVSGTTTLAMKSGLHPAILRNSVTSPGGTTASALYVLEQGRFRTVLADSFWSAYRRSLELGHMDSNVGPGRSR 340
F++I +G GKM+ A+++ +T + +V+DVS ++ + K GV+ + S+ A +D+D ++ AVKPQNL + + R A P +++LS++AG + F + NK +VR+MPNTPA + +GMTVW+CT +++ S RN + LS+ G +V DE Y+DMAT++SGSGP Y+ L++E++ID AVH+GF R+ A+ LV T+ G+T AM+SG HPAILRN VTSP GTTASALY LE G+ RTV+ D+ W+ YRRSLE+G+ DSNVGPGRS+
Sbjct: 38 FSKIACIGTGKMAHALLKPMITTGFHPAKDFTVFDVSTNLMEQVSKELGVKTAESIPEAIEDADFILCAVKPQNLNSAFFAEFRKAQPHPNAILLSVIAGKTIDVFHHTHINK-IVRSMPNTPAQVGEGMTVWSCTPNLTGSDRNLIQTVLSTCGHSMYVDDESYIDMATSISGSGPAYIFLLMESMIDGAVHMGFPRDKATTLVYHTMLGSTLYAMESGEHPAILRNMVTSPSGTTASALYELENGKIRTVIKDAMWACYRRSLEMGNHDSNVGPGRSQ 316
BLAST of EWM30409.1 vs. NCBI_GenBank
Match: gi|1210513805|dbj|GAX27104.1| (hypothetical protein FisN_13Lh352 [Fistulifera solaris]) HSP 1 Score: 287.345 bits (734), Expect = 7.073e-92 Identity = 141/311 (45.34%), Postives = 203/311 (65.27%), Query Frame = 0
Query: 31 SATVRWIHRSQAALSHDDSKPDPVANAEGFDFNRIGLVGGGKMSEAIIEGFVTEKLIQPEKISVYDVSRKRLDYLMKTFGVQASSSLAAACKDSDLVIIAVKPQNLTQKLWTQLR-ANLDPKSVVLSIVAGIPMSNFVESTGNKRVVRTMPNTPATIQQGMTVWACTDHVSVSQRNSVAKFLSSLGEQHFVHDEQYLDMATAVSGSGPGYVLLILEALIDAAVHLGFARNVASKLVLQTVSGTTTLAMKSGLHPAILRNSVTSPGGTTASALYVLEQGRFRTVLADSFWSAYRRSLELGHMDSNVGPGRSR 340
S T R RS H S P + F++I +G GKM+ A+++ +T + +V+DVS ++ + GVQ + S+ A + +D ++ AVKPQNL + + R A P +++LS++AG + F + NK +VR+MPNTPA + +GMTVW+CT +++ S RN + LS+ G +V DE Y+DMAT++SGSGP Y+ L++E++ID AVH+GF R+ A+ LV T+ G+T AM+SG HPAILRN VTSP GTTASALY LE G+ RTV+ D+ W+ YRRSLE+G+ DSNVGPGRS+
Sbjct: 10 STTSRLFWRSCVTRYHYYSTEKPSFDGTTPAFSKIACIGTGKMAHALLKPMITTGFHPAKDFTVFDVSTNLMEQVSNELGVQTAESIPEAIEGADFILCAVKPQNLNAAFFAEFRKAQPHPNAILLSVIAGKTIDVFHHTHINK-IVRSMPNTPAQVGEGMTVWSCTPNLTGSDRNLIQTVLSTCGHSMYVDDESYIDMATSISGSGPAYIFLLMESMIDGAVHMGFPRDKATTLVYHTMLGSTLYAMESGEHPAILRNMVTSPSGTTASALYELENGKIRTVIKDAMWACYRRSLEMGNHDSNVGPGRSQ 319
BLAST of EWM30409.1 vs. NCBI_GenBank
Match: gi|929759920|ref|XP_014154941.1| (pyrroline-5-carboxylate reductase [Sphaeroforma arctica JP610] >gi|906951100|gb|KNC81039.1| pyrroline-5-carboxylate reductase [Sphaeroforma arctica JP610]) HSP 1 Score: 282.337 bits (721), Expect = 1.609e-90 Identity = 135/277 (48.74%), Postives = 200/277 (72.20%), Query Frame = 0
Query: 64 RIGLVGGGKMSEAIIEGFVTEKLIQPEKISVYDVSRKRLDYLMKTFGVQASSSLAAACKDSDLVIIAVKPQNLTQKLWTQLRANLDPKSVVLSIVAGIPMSNFVESTGNKRVVRTMPNTPATIQQGMTVWACTDHVSVSQRNSVAKFLSSLGEQHFVHDEQYLDMATAVSGSGPGYVLLILEALIDAAVHLGFARNVASKLVLQTVSGTTTLAMKSG-LHPAILRNSVTSPGGTTASALYVLEQGRFRTVLADSFWSAYRRSLELGHMDSNVGPGRS 339
R+ ++G G+M+EA+I G ++++ + +++ VYD++ K + K +G AS+S+ A DSD+VI+AVKP N+T + + + L PK+ V+S++AG+ M+ + ++R+VR M NTPA I QGMTVW + + +++V +F +++GE+ +V +E+YLDMATA+SGSGP YV+L++EAL D+ VHLGF R+VA KL QT+ GTT ++ S +H A LRN VTSPGGTTA+ALY LE G FRTV++ + W+AYRR+LELG DSNVGPGRS
Sbjct: 18 RLTMIGAGRMAEALINGIISKEALPADQVVVYDINAKVSANISKKYGCVASNSMLDAITDSDVVILAVKPNNVTD-VGKVIASALSPKTTVVSVMAGVNMNTLSTTLNHRRIVRAMSNTPAFISQGMTVWTGSQECTQENKDTVQQFFAAVGEEIYVSEEKYLDMATAISGSGPAYVMLMMEALTDSGVHLGFPRDVAKKLAQQTLLGTTMYSINSDEIHLAKLRNDVTSPGGTTATALYELEAGGFRTVMSKAVWAAYRRALELGGSDSNVGPGRS 293
BLAST of EWM30409.1 vs. NCBI_GenBank
Match: gi|219129043|ref|XP_002184708.1| (pyrroline-5-carboxylate reductase, partial [Phaeodactylum tricornutum CCAP 1055/1] >gi|217403817|gb|EEC43767.1| pyrroline-5-carboxylate reductase, partial [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 281.182 bits (718), Expect = 1.701e-90 Identity = 131/267 (49.06%), Postives = 194/267 (72.66%), Query Frame = 0
Query: 64 RIGLVGGGKMSEAIIEGFVTEKLIQPEKISVYDVSRKRLDYLMKTFGVQASSSLAAACKDSDLVIIAVKPQNLTQKLWTQLR-ANLDPKSVVLSIVAGIPMSNFVESTGNKRVVRTMPNTPATIQQGMTVWACTDHVSVSQRNSVAKFLSSLGEQHFVHDEQYLDMATAVSGSGPGYVLLILEALIDAAVHLGFARNVASKLVLQTVSGTTTLAMKSGLHPAILRNSVTSPGGTTASALYVLEQGRFRTVLADSFWSAYRRSLELGH 329
+I +G GKM++A+IE + + + E SV+DVS K ++ + + GV+ + S+ +DLVI AVKPQNLT + +LR +++ +++LS++AG S F + G ++VVR+MPNTPATI +GMTVW+CT +++V +R + + LSS G+ +V DE ++DMAT++SGSGP Y+ +++E++IDA VH+GF R+ A+ LV T+ G+T AM++G HPAILRNSVTSP GTTASALY LE GRFRTV+ D+ W+ YRRSLE+G+
Sbjct: 1 KIACIGTGKMAQAVIEPMIKKGVQSAENFSVFDVSPKTMEQVHQKLGVKTADSIPELVSGADLVICAVKPQNLTPAFFQELRKSDIRQNAILLSVIAGKSSSVFTQG-GFEKVVRSMPNTPATIGEGMTVWSCTPNLTVDERKKIRQVLSSCGKSMYVDDESFIDMATSISGSGPAYIFMLMESMIDAGVHMGFPRDKATTLVYHTMLGSTLYAMETGEHPAILRNSVTSPSGTTASALYELENGRFRTVIKDAMWACYRRSLEMGN 266
BLAST of EWM30409.1 vs. NCBI_GenBank
Match: gi|551642043|ref|XP_005823820.1| (hypothetical protein GUITHDRAFT_155130 [Guillardia theta CCMP2712] >gi|428167888|gb|EKX36840.1| hypothetical protein GUITHDRAFT_155130 [Guillardia theta CCMP2712]) HSP 1 Score: 278.1 bits (710), Expect = 1.564e-88 Identity = 132/293 (45.05%), Postives = 203/293 (69.28%), Query Frame = 0
Query: 54 VANAEGFDFNRIGLVGGGKMSEAIIEGFVTEKLIQPEKISVYDVSRKRLDYLMKTF-GVQASSSLAAACKDSDLVIIAVKPQNLTQKLWTQLRANLDP------KSVVLSIVAGIPMSNFVESTGNKRVVRTMPNTPATIQQGMTVWACTDHVSVSQRNSVAKFLSSLGEQHFVHDEQYLDMATAVSGSGPGYVLLILEALIDAAVHLGFARNVASKLVLQTVSGTTTLAMKSGLHPAILRNSVTSPGGTTASALYVLEQGRFRTVLADSFWSAYRRSLELGHMDSNVGPGRS 339
++ A G ++IG +G G M++AI+ G + + + + VYDVS ++D K F G++ + SL D+D+V++ VKPQN+ + + L+A ++ +V+ SI+AG+P+ F + TG + +VR MPNTP T++QG TVW T + ++ ++K S++G++ ++ DE++LDMATA+SGSGP YV L +EA+ID+ VH+GF R++A +LV+ T+ GT A++SG H + LRN +TSPGGTTASA+Y LE+G FRT ++D+ W+AYRRSLELG MDSNVGPGR+
Sbjct: 17 ISAAAGNLCDKIGFIGAGNMAKAIMGGMIRNGVQRAHNVMVYDVSTDQMDACCKAFPGIRKAESLHNLLMDADIVLLGVKPQNV-EAVLKPLKAEVEKMGPLRTDTVLASIIAGVPLHAFQKYTGMENIVRAMPNTPVTVEQGCTVWCSTRDLPKEKKELISKLFSAIGDEIYMEDERFLDMATAISGSGPAYVFLTMEAMIDSGVHMGFPRHIAERLVMNTLLGTCLYAIQSGEHVSKLRNDITSPGGTTASAIYNLEKGGFRTTVSDAVWAAYRRSLELGGMDSNVGPGRN 308
BLAST of EWM30409.1 vs. NCBI_GenBank
Match: gi|1072227511|gb|OEU12250.1| (pyrroline-5-carboxylate reductase [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 276.944 bits (707), Expect = 1.208e-87 Identity = 128/288 (44.44%), Postives = 196/288 (68.06%), Query Frame = 0
Query: 62 FNRIGLVGGGKMSEAIIEGFVTEKLIQPEKISVYDVSRKRLDYLMKTF-GVQASSSLAAACKDSDLVIIAVKPQNLTQKLWTQLRAN-----------LDPKSVVLSIVAGIPMSNFVESTGNKRVVRTMPNTPATIQQGMTVWACTDHVSVSQRNSVAKFLSSLGEQHFVHDEQYLDMATAVSGSGPGYVLLILEALIDAAVHLGFARNVASKLVLQTVSGTTTLAMKSGLHPAILRNSVTSPGGTTASALYVLEQGRFRTVLADSFWSAYRRSLELGHMDSNVGPG 337
F++I +G GKM++++I+ + K+SVYDVS K + + + +Q + SLA A ++D +++AVKPQN+ + W Q + L + ++SI+AG P+ +FV S G ++VR+MPNTP+ I +GMTVW CT ++ R SV+K L + G+ +V DE+++DM+T++SGSGP Y+ +++EA+IDA VH+GF+R A+ LV T+ G+T AM++G HPA+LRNSVTSPGGTTASA+Y LE+G R ++ D+ W+ YRRSLE+G +S+VGPG
Sbjct: 12 FDKIAFIGTGKMAQSMIDPLIKNGFQPASKVSVYDVSAKSMQEMKTRYPDIQTTESLAEAVHEADCIVLAVKPQNVNESFWNQFPSKDSDDVKKDNYRLRDDATLVSILAGTPVKDFVPS-GISKIVRSMPNTPSMIGEGMTVWCCTSSLATGDRQSVSKLLHTFGKAIYVDDEKFVDMSTSISGSGPAYIFMLMEAMIDAGVHMGFSRETATTLVNHTLLGSTLYAMETGTHPALLRNSVTSPGGTTASAIYELERGGLRPLVNDAIWACYRRSLEMGGRNSSVGPG 298
BLAST of EWM30409.1 vs. NCBI_GenBank
Match: gi|224015258|ref|XP_002297287.1| (predicted protein, partial [Thalassiosira pseudonana CCMP1335] >gi|220968081|gb|EED86437.1| predicted protein, partial [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 275.404 bits (703), Expect = 1.581e-87 Identity = 128/274 (46.72%), Postives = 192/274 (70.07%), Query Frame = 0
Query: 62 FNRIGLVGGGKMSEAIIEGFVTEKLIQPEKISVYDVSRKRLDYLMKTF-GVQASSSLAAACKDSDLVIIAVKPQNLTQKLWTQLR------ANLDPKSVVLSIVAGIPMSNFVESTGNKRVVRTMPNTPATIQQGMTVWACTDHVSVSQRNSVAKFLSSLGEQHFVHDEQYLDMATAVSGSGPGYVLLILEALIDAAVHLGFARNVASKLVLQTVSGTTTLAMKSGLHPAILRNSVTSPGGTTASALYVLEQGRFRTVLADSFWSAYRRSLELG 328
F++I +G GKM+++++ + L P I+ +DVS L + + + GVQ +SS+ A D+ L++ AVKPQN+ +K+ ++R N+ + +LS+VAG P+ +FVE +G +RV R+MPNTPA I G+TVW+CTD++ + R + + L S G+ FV DE ++DM+T++SGSGP Y+ L++EA+IDA VH+GF+R A+ LV T+ G+T AM++G HPA+LRNSVTSP GTTASA+Y LE G+FRTV+ D+ W+ YRRSLE+G
Sbjct: 51 FSKITFLGTGKMAQSMLSPLINRNLQAPSSITAFDVSDAALRRVEQLYPGVQTASSITEAISDAQLIVYAVKPQNV-EKVHAEIRRAKYETGNVREDATLLSVVAGKPIHSFVEGSGVQRVARSMPNTPAQIGAGVTVWSCTDNIDSADRKKIKQVLDSFGKTVFVDDESFIDMSTSISGSGPAYIFLLMEAMIDAGVHMGFSRETATTLVHHTLLGSTKFAMETGEHPAVLRNSVTSPAGTTASAIYELENGKFRTVIKDAIWACYRRSLEMG 323
BLAST of EWM30409.1 vs. NCBI_GenBank
Match: gi|551569766|ref|XP_005770843.1| (pyrroline-5-carboxylate reductase [Emiliania huxleyi CCMP1516] >gi|485621971|gb|EOD18414.1| pyrroline-5-carboxylate reductase [Emiliania huxleyi CCMP1516]) HSP 1 Score: 270.781 bits (691), Expect = 5.824e-86 Identity = 143/292 (48.97%), Postives = 193/292 (66.10%), Query Frame = 0
Query: 63 NRIGLVGGGKMSEAIIEGFVTEKLIQPEKISVYDVSRKRLDYLMKTFGVQASSSLAAACKDSDLVIIAVKPQNLTQKLWTQLRANLDPKSVVLSIVAGIPMSNFVESTGNKRVVRTMPNTPATIQQGMTVWACTDHVSVSQRNSVAKFLSSLGEQHFVHDEQYLDMATAVSGSGPGYVLLILEALIDAAVHLGFARNVASKLVLQTVSGTTTLAMK----SGLHPAILRNSVTSPGGTTASALYVLEQGRFRTVLADSFWSAYRRSLELGHMDSNVGPGRSRHDAHETDSHK 350
+RI ++G GKM+EA+ +G E + + DV+R R + FG S A + +DLV++A KPQN+ + +L ++D ++VVLSI+AG P+S S G RVVR+MPNTPA +++GMTVW T VS + R V++ L SLG++H V DE+YLDMATA+SGSGP YVLL++E++I+ VHLG R+VA+KLV QTV GT A S + + LR+ +TSP GTTASA+Y LE+G FRT +AD W+AYRRSLELG DSNVGP RS+ TD K
Sbjct: 10 SRIAMIGCGKMAEALADGLQAE--LPGLSLCAADVNRHRALLFQERFGASVHESARDAVRGADLVLLACKPQNIA-AVGKELCGHIDSETVVLSILAGTPLSVLSGSLGVARVVRSMPNTPAAVKEGMTVWMGTQSVSDADRRLVSRVLGSLGQEHEVDDEKYLDMATALSGSGPAYVLLLMESMIETGVHLGLQRDVATKLVQQTVKGTAVYAGSPEGMSAANYSALRSDITSPSGTTASAVYTLERGGFRTTVADGLWAAYRRSLELGLQDSNVGPDRSKLVGKGTDRSK 298
BLAST of EWM30409.1 vs. NCBI_GenBank
Match: gi|1173936098|gb|OQR87119.1| (delta-1-pyrroline-5-carboxylate reductase, partial [Thraustotheca clavata]) HSP 1 Score: 265.388 bits (677), Expect = 7.088e-84 Identity = 133/289 (46.02%), Postives = 191/289 (66.09%), Query Frame = 0
Query: 47 DDSKPDPVANAEGFDFNRIGLVGGGKMSEAIIEGFVTEKLIQPEKISVYDVS---RKRLDYLMKTFGVQASSSLAAACKDSDLVIIAVKPQNLTQKLWTQLRANLDPKSVVLSIVAGIPMSNFVESTGNKR-VVRTMPNTPATIQQGMTVWACTDHVSVSQRNSVAKFLSSLGEQHFVHDEQYLDMATAVSGSGPGYVLLILEALIDAAVHLGFARNVASKLVLQTVSGTTTLAMKSGLHPAILRNSVTSPGGTTASALYVLEQGRFRTVLADSFWSAYRRSLELGHMD 331
+D + + + N + + +R+ +GGG M+EAII G +T++LI P +I V S R + D + ++ A + +D+VIIAVKPQ L Q ++ L+ +L+P ++V+SIVAG+ + F G+ +VR+MPNTPA I +G+TVW+ + +VS +Q + K L + G+Q FV DE+ LDMATA+SGSGP Y L+ EA+IDA VH+GF R VA KLV QT+ G+ SGLHP ILRN++TSPGGTTA+A+Y E+ FR V+ADS W+A+ RS ELG D
Sbjct: 5 EDDEDEDMGNMDTLNVDRVAFIGGGNMAEAIITGMMTQELIPPSQILVSAPSPETRDKFDEMQ----IKTVDKNKKALEGADVVIIAVKPQVLKQAVFEDLKKHLNPHALVISIVAGVTIDAFKRELGHDACIVRSMPNTPAMIGEGITVWSQSSNVSETQHDLTKKILGAFGKQVFVEDEKNLDMATALSGSGPAYFFLVAEAMIDAGVHMGFGRKVAQKLVQQTMLGSALYMQSSGLHPVILRNNITSPGGTTAAAMYTAEKSGFRAVIADSIWAAFERSKELGAQD 289 The following BLAST results are available for this feature:
BLAST of EWM30409.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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