EWM28086.1, cds2584 (CDS) Nannochloropsis gaditana | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	EWM28086.1
Unique Name	cds2584
Type	CDS
Organism	Nannochloropsis gaditana (N. gaditana B-31)
Alignment location	CM002459.1:745463..745516 +
Alignment location	CM002459.1:745666..746784 +

Link to JBrowse

Properties


Property Name	Value
Protein id	EWM28086.1
Product	suppressor of g2 allele of skp1
Orig transcript id	gnl\|cribi\|Naga_100120g12.6947.mrna
Gbkey	CDS

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
CM002459.1	supercontig	CM002459.1:745463..745516 +
CM002459.1	supercontig	CM002459.1:745666..746784 +

Analyses

This CDS is derived from or has results from the following analyses


Analysis Name	Date Performed
GO annotation for N. gaditana B31	2020-04-08
BLAST analysis for N. gaditana B-31	2020-04-07
InterPro analysis for N. gaditana B-31	2020-04-06
Gene prediction for N. gaditana B-31	2014-02-18

Annotated Terms

The following terms have been associated with this CDS:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR013026	TPR-contain_dom
IPR008978	HSP20-like_chaperone
IPR011990	TPR-like_helical_dom
IPR013105	TPR_2
IPR007052	CS_dom
IPR007699	SGS
IPR019734	TPR_repeat

Homology

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BLAST of EWM28086.1 vs. NCBI_GenBank
Match: gi|585110429|gb|EWM28086.1| (suppressor of g2 allele of skp1 [Nannochloropsis gaditana])

HSP 1 Score: 796.193 bits (2055), Expect = 0.000e+0
Identity = 390/390 (100.00%), Postives = 390/390 (100.00%), Query Frame = 0

Query:    1 MEQAQLAFMDEDYATADELFSAYIATHPDDATALVSRAAVHLKLNQPSQALHDAEAAASLKSDLEVAWYRQGVAAFALEDFSRAKEAFMRGRALLGDRPEPQGRRYDVWLRKTTLELGEHDEQGMTVVAEGGIKELRQEQGAKGIEATVPRSQPSPTHPPSSAPAIPAGHVKFQFYQTTSYVTVTILYKGLREEDANVSVQPRHLKVSVGADGDALFDRALFETVVPEESTSKIFATKVEVKLRKAMEGLTWPELCALSPSAAASVHTVSAPTPDSHATALPSLAQGPATAPSSKPLRPYASTKDWGAVEKEISKELESEKPEGDEALNTLFRDIYAKGSDETRRAMVKSFQTSGGTVLSTNWEEVGKKDYEKEEERKAPEGMEWRKWGV 390
            MEQAQLAFMDEDYATADELFSAYIATHPDDATALVSRAAVHLKLNQPSQALHDAEAAASLKSDLEVAWYRQGVAAFALEDFSRAKEAFMRGRALLGDRPEPQGRRYDVWLRKTTLELGEHDEQGMTVVAEGGIKELRQEQGAKGIEATVPRSQPSPTHPPSSAPAIPAGHVKFQFYQTTSYVTVTILYKGLREEDANVSVQPRHLKVSVGADGDALFDRALFETVVPEESTSKIFATKVEVKLRKAMEGLTWPELCALSPSAAASVHTVSAPTPDSHATALPSLAQGPATAPSSKPLRPYASTKDWGAVEKEISKELESEKPEGDEALNTLFRDIYAKGSDETRRAMVKSFQTSGGTVLSTNWEEVGKKDYEKEEERKAPEGMEWRKWGV
Sbjct:    1 MEQAQLAFMDEDYATADELFSAYIATHPDDATALVSRAAVHLKLNQPSQALHDAEAAASLKSDLEVAWYRQGVAAFALEDFSRAKEAFMRGRALLGDRPEPQGRRYDVWLRKTTLELGEHDEQGMTVVAEGGIKELRQEQGAKGIEATVPRSQPSPTHPPSSAPAIPAGHVKFQFYQTTSYVTVTILYKGLREEDANVSVQPRHLKVSVGADGDALFDRALFETVVPEESTSKIFATKVEVKLRKAMEGLTWPELCALSPSAAASVHTVSAPTPDSHATALPSLAQGPATAPSSKPLRPYASTKDWGAVEKEISKELESEKPEGDEALNTLFRDIYAKGSDETRRAMVKSFQTSGGTVLSTNWEEVGKKDYEKEEERKAPEGMEWRKWGV 390

[Close]

BLAST of EWM28086.1 vs. NCBI_GenBank
Match: gi|568023962|gb|ETL98007.1| (hypothetical protein L917_04843 [Phytophthora parasitica])

HSP 1 Score: 270.011 bits (689), Expect = 3.326e-84
Identity = 158/387 (40.83%), Postives = 221/387 (57.11%), Query Frame = 0

Query:    8 FMDEDYATADELFSAYIATHPDDATALVSRAAVHLKLNQPSQALHDAEAAASLKSDLEVAWYRQGVAAFALEDFSRAKEAFMRGRALLGDRPEPQGRRYDVWLRKTTLELGEHDEQGMTVVAEGGIKELRQEQGAKGIEATVPRSQPSPTHPPSSAPAIPAGHVKFQFYQTTSYVTVTILYKGLREEDANVSVQPRHLKVSVGADGDAL--FDRALFETVVPEESTSKIFATKVEVKLRKAMEGLTWPELCALSPSAAASVHTVSAPTPDSHATALPSLAQGPATAPSSKPL---RPYASTKDWGAVEKEISKELESEKPEGDEALNTLFRDIYAKGSDETRRAMVKSFQTSGGTVLSTNWEEVGKKDYEKEEERKAPEGMEWRKWG 389
            F+DE Y  A   ++  +   P DA AL  RAA +LKLN+  +A+ DA  A+ L   L +   R GVA F LE ++ AK AF RG+       E   +R+  W+RK   EL   DE+   V+ +  +           ++ + P +Q +    P   P  P   ++  +YQ+ ++VTV+IL K L ++D  VS++P+ L V V  DG+    ++ ALF+ V+P+ES  K+  +KVE+KL+K   G+ W +L  +   + A V T                  GPA    +KP    RPYAS++DW  +EK I  ELE+EKPEG+EA+  LFRDIYAK  + TR+AM KSFQTSGGTVLSTNW+EV  KDYEK  ER AP GMEW++WG
Sbjct:   11 FVDEAYEEAVRSYTHALEKQPQDADALSKRAAAYLKLNKLQEAVADASRASELDPTLHMTHMRHGVAQFELEKYAEAKRAFQRGKDTAPKADEALIKRFQTWIRKCDAELDTDDEE--LVIPDDPVP----------MQTSAPSNQGAAVVAP--LPMKPM--IRHDWYQSNTHVTVSILQKKLAQDDVEVSIEPKKLLVRVKLDGEMAEAYNEALFDEVIPDESAFKVLGSKVELKLKKKSSGMHWDKLEEVVYQSGAQVMT------------------GPAAVFEAKPEQVPRPYASSRDWNQIEKTIGDELEAEKPEGEEAMQKLFRDIYAKADENTRKAMNKSFQTSGGTVLSTNWKEVADKDYEK--ERTAPSGMEWKQWG 361

[Close]

BLAST of EWM28086.1 vs. NCBI_GenBank
Match: gi|675187261|ref|XP_008902515.1| (hypothetical protein PPTG_09337 [Phytophthora parasitica INRA-310] >gi|566028632|gb|ETI51543.1| hypothetical protein F443_05134 [Phytophthora parasitica P1569] >gi|567965982|gb|ETK91442.1| hypothetical protein L915_04996 [Phytophthora parasitica] >gi|567994700|gb|ETL44852.1| hypothetical protein L916_04944 [Phytophthora parasitica] >gi|568054385|gb|ETM51168.1| hypothetical protein L914_04951 [Phytophthora parasitica] >gi|568097815|gb|ETN12557.1| hypothetical protein PPTG_09337 [Phytophthora parasitica INRA-310] >gi|570956325|gb|ETP21331.1| hypothetical protein F441_05134 [Phytophthora parasitica CJ01A1] >gi|570991536|gb|ETP49257.1| hypothetical protein F442_05192 [Phytophthora parasitica P10297])

HSP 1 Score: 269.626 bits (688), Expect = 3.548e-84
Identity = 158/387 (40.83%), Postives = 221/387 (57.11%), Query Frame = 0

Query:    8 FMDEDYATADELFSAYIATHPDDATALVSRAAVHLKLNQPSQALHDAEAAASLKSDLEVAWYRQGVAAFALEDFSRAKEAFMRGRALLGDRPEPQGRRYDVWLRKTTLELGEHDEQGMTVVAEGGIKELRQEQGAKGIEATVPRSQPSPTHPPSSAPAIPAGHVKFQFYQTTSYVTVTILYKGLREEDANVSVQPRHLKVSVGADGDAL--FDRALFETVVPEESTSKIFATKVEVKLRKAMEGLTWPELCALSPSAAASVHTVSAPTPDSHATALPSLAQGPATAPSSKPL---RPYASTKDWGAVEKEISKELESEKPEGDEALNTLFRDIYAKGSDETRRAMVKSFQTSGGTVLSTNWEEVGKKDYEKEEERKAPEGMEWRKWG 389
            F+DE Y  A   ++  +   P DA AL  RAA +LKLN+  +A+ DA  A+ L   L +   R GVA F LE ++ AK AF RG+       E   +R+  W+RK   EL   DE+   V+ +  +           ++ + P +Q +    P   P  P   ++  +YQ+ ++VTV+IL K L ++D  VS++P+ L V V  DG+    ++ ALF+ V+P+ES  K+  +KVE+KL+K   G+ W +L  +   + A V T                  GPA    +KP    RPYAS++DW  +EK I  ELE+EKPEG+EA+  LFRDIYAK  + TR+AM KSFQTSGGTVLSTNW+EV  KDYEK  ER AP GMEW++WG
Sbjct:   11 FVDEAYEEAVRSYTRALEKQPQDADALSKRAAAYLKLNKLQEAVADASRASELDPTLHMTHMRHGVAQFELEKYAEAKRAFQRGKDTAPKADEALIKRFQTWIRKCDAELDTDDEE--LVIPDDPVP----------MQTSAPSNQGAAVVAP--LPMKPT--IRHDWYQSNTHVTVSILQKKLAQDDVEVSIEPKKLLVRVKLDGEMAEAYNEALFDEVIPDESAFKVLGSKVELKLKKKSSGMHWDKLEEVVYQSGAQVMT------------------GPAAVFEAKPEQVPRPYASSRDWNQIEKTIGDELEAEKPEGEEAMQKLFRDIYAKADENTRKAMNKSFQTSGGTVLSTNWKEVADKDYEK--ERTAPSGMEWKQWG 361

[Close]

BLAST of EWM28086.1 vs. NCBI_GenBank
Match: gi|570332356|gb|ETO80304.1| (hypothetical protein F444_05171 [Phytophthora parasitica P1976])

HSP 1 Score: 268.855 bits (686), Expect = 7.728e-84
Identity = 157/387 (40.57%), Postives = 221/387 (57.11%), Query Frame = 0

Query:    8 FMDEDYATADELFSAYIATHPDDATALVSRAAVHLKLNQPSQALHDAEAAASLKSDLEVAWYRQGVAAFALEDFSRAKEAFMRGRALLGDRPEPQGRRYDVWLRKTTLELGEHDEQGMTVVAEGGIKELRQEQGAKGIEATVPRSQPSPTHPPSSAPAIPAGHVKFQFYQTTSYVTVTILYKGLREEDANVSVQPRHLKVSVGADGDAL--FDRALFETVVPEESTSKIFATKVEVKLRKAMEGLTWPELCALSPSAAASVHTVSAPTPDSHATALPSLAQGPATAPSSKPL---RPYASTKDWGAVEKEISKELESEKPEGDEALNTLFRDIYAKGSDETRRAMVKSFQTSGGTVLSTNWEEVGKKDYEKEEERKAPEGMEWRKWG 389
            F+DE Y  A   ++  +   P DA AL  RAA +LKLN+  +A+ DA  A+ L   L +   R GVA F LE ++ AK AF RG+       E   +R+  W+RK   EL   DE+   V+ +  +           ++ + P +Q +    P   P  P   ++  +YQ+ ++VTV+IL K L ++D  VS++P+ L V V  DG+    ++ ALF+ V+P+ES  K+  +KVE+KL+K   G+ W +L  +   + A V T                  GPA    +KP    RPYAS++DW  +EK +  ELE+EKPEG+EA+  LFRDIYAK  + TR+AM KSFQTSGGTVLSTNW+EV  KDYEK  ER AP GMEW++WG
Sbjct:   11 FVDEAYEEAVRSYTRALEKQPQDADALSKRAAAYLKLNKLQEAVADASRASELDPTLHMTHMRHGVAQFELEKYAEAKRAFQRGKDTAPKADEALIKRFQTWIRKCDAELDTDDEE--LVIPDDPVP----------MQTSAPSNQGAAVVAP--LPMKPM--IRHDWYQSNTHVTVSILQKKLAQDDVEVSIEPKKLLVRVKLDGEMAEAYNEALFDEVIPDESAFKVLGSKVELKLKKKSSGMHWDKLEEVVYQSGAQVMT------------------GPAAVFEAKPEQVPRPYASSRDWNQIEKTVGDELEAEKPEGEEAMQKLFRDIYAKADENTRKAMNKSFQTSGGTVLSTNWKEVADKDYEK--ERTAPSGMEWKQWG 361

[Close]

BLAST of EWM28086.1 vs. NCBI_GenBank
Match: gi|970648116|gb|KUF87749.1| (SGT1 A protein [Phytophthora nicotianae])

HSP 1 Score: 268.085 bits (684), Expect = 2.947e-78
Identity = 157/387 (40.57%), Postives = 220/387 (56.85%), Query Frame = 0

Query:    8 FMDEDYATADELFSAYIATHPDDATALVSRAAVHLKLNQPSQALHDAEAAASLKSDLEVAWYRQGVAAFALEDFSRAKEAFMRGRALLGDRPEPQGRRYDVWLRKTTLELGEHDEQGMTVVAEGGIKELRQEQGAKGIEATVPRSQPSPTHPPSSAPAIPAGHVKFQFYQTTSYVTVTILYKGLREEDANVSVQPRHLKVSVGADGDAL--FDRALFETVVPEESTSKIFATKVEVKLRKAMEGLTWPELCALSPSAAASVHTVSAPTPDSHATALPSLAQGPATAPSSKPL---RPYASTKDWGAVEKEISKELESEKPEGDEALNTLFRDIYAKGSDETRRAMVKSFQTSGGTVLSTNWEEVGKKDYEKEEERKAPEGMEWRKWG 389
            F+DE Y  A   ++  +   P DA AL  RAA +LKLN+  +A+ DA  A+ L   L +   R GVA F LE ++ AK  F RG+       E   +R+  W+RK   EL   DE+   V+ +  +           ++ + P +Q +    P   P  P   ++  +YQ+ ++VTV+IL K L ++D  VS++P+ L V V  DG+    ++ ALF+ V+P+ES  K+  +KVE+KL+K   G+ W +L  +   + A V T                  GPA    +KP    RPYAS++DW  +EK I  ELE+EKPEG+EA+  LFRDIYAK  + TR+AM KSFQTSGGTVLSTNW+EV  KDYEK  ER AP GMEW++WG
Sbjct:  542 FVDEAYEEAVRSYTRALEKQPQDADALSKRAAAYLKLNKLQEAVADASRASELDPTLHMTHMRHGVAQFELEKYAEAKRVFQRGKDTAPKADEALIKRFQTWIRKCDAELDTDDEE--LVIPDDPVP----------MQTSAPSNQGAAVVAP--LPMKPT--IRHDWYQSNTHVTVSILQKKLAQDDVEVSIEPKKLLVRVKLDGEMAEAYNEALFDEVIPDESAFKVLGSKVELKLKKKSSGMHWDKLEEVVYQSGAQVMT------------------GPAAVFEAKPEQVPRPYASSRDWNQIEKTIGDELEAEKPEGEEAMQKLFRDIYAKADENTRKAMNKSFQTSGGTVLSTNWKEVADKDYEK--ERTAPSGMEWKQWG 892

[Close]

BLAST of EWM28086.1 vs. NCBI_GenBank
Match: gi|299470781|emb|CBN79827.1| (SGT1 homologue [Ectocarpus siliculosus])

HSP 1 Score: 252.292 bits (643), Expect = 1.207e-76
Identity = 167/409 (40.83%), Postives = 232/409 (56.72%), Query Frame = 0

Query:    1 MEQAQLAFMDEDYATADELFSAYIATHPD-DATALVSRAAVHLKLNQPSQALHDAEAAASLKSDLEVAWYRQGVAAFALEDFSRAKEAFMRGRAL---LGDRPEPQGRRYDVWLRKTTLELGE----------HDEQGMTVVAEGGIKELRQ----EQGAKGIEATVPRSQPSPTHPPSSAPAIPAGHVKFQFYQTTSYVTVTILYKGLREEDANVSVQPRHLKVSVGADGDA---LFDRALFETVVPEESTSKIFATKVEVKLRKAMEGLTWPELCALSPSAAASVHTVSAPTPDSHATALPSLAQGPATAPSSKPLRPYASTKDWGAVEKEISKELESEKPEGDEALNTLFRDIYAKGSDETRRAMVKSFQTSGGTVLSTNWEEVGKKDYEKEEERKAPEGMEWRKW 388
            + +   AF+DEDY    + +   I+   + +A A  +RAAV+LKL++ ++AL DA AA  L    E+A+YR+G+AAFALE+F  A EAF +G+ L    GD  +P  R+Y  W+RK   EL              ++ M                   G+ G  A   +  P P    S+APA     +KFQ+YQ+   VTV +L KGL+E +  V V+ + L V   A  +A   LFD+ L+E V+PE+  ++  A+K+EV + K      WPEL        A++         +   A  +  +     P +K  RPY+STKDW  VEKE+ KELE+EKP G++ALN LF+ IY K  ++TRRAMVKSFQTSGGTVLSTNW+EVGK DYEK  ER+AP+GMEW+ W
Sbjct:    8 IHKGNQAFIDEDYPATLQAYGEAISLGGEGEALARSNRAAVYLKLSKHTEALQDASAAVKLMP-TEMAFYRKGLAAFALEEFETALEAFRQGKKLEEERGDSNDP--RKYRTWVRKCEAELEAEEEAHAAAAASSDRSMPPTTPTTTTTTSDVAPVSGGSVGAAAAPVKRTPVPAS--STAPAHL--RIKFQYYQSYEKVTVAVLEKGLKESEVKVDVEAKRLTVRRKAGDNAGALLFDKVLYEEVLPEKCRTRFMASKLEVTMTKKSPA-DWPEL------EGAAIPAARPAAAATATDASSTSGEAAVEQPPTKVARPYSSTKDWDVVEKEVQKELEAEKPGGEQALNDLFKSIYGKADEDTRRAMVKSFQTSGGTVLSTNWDEVGKADYEK--ERQAPKGMEWKTW 400

[Close]

BLAST of EWM28086.1 vs. NCBI_GenBank
Match: gi|695416323|ref|XP_009526808.1| (hypothetical protein PHYSODRAFT_498024 [Phytophthora sojae] >gi|348677933|gb|EGZ17750.1| hypothetical protein PHYSODRAFT_498024 [Phytophthora sojae])

HSP 1 Score: 261.922 bits (668), Expect = 3.902e-76
Identity = 158/387 (40.83%), Postives = 213/387 (55.04%), Query Frame = 0

Query:    8 FMDEDYATADELFSAYIATHPDDATALVSRAAVHLKLNQPSQALHDAEAAASLKSDLEVAWYRQGVAAFALEDFSRAKEAFMRGRALLGDRPEPQGRRYDVWLRKTTLELGEHDEQGMTVVAEGGIKELRQEQGAKGIEATVPRSQPSPTHPPSSAPAIPAGHVKFQFYQTTSYVTVTILYKGLREEDANVSVQPRHLKVSVGADGDAL--FDRALFETVVPEESTSKIFATKVEVKLRKAMEGLTWPELCALSPSAAASVHTVSAPTPDSHATALPSLAQGPATAPSSKPL---RPYASTKDWGAVEKEISKELESEKPEGDEALNTLFRDIYAKGSDETRRAMVKSFQTSGGTVLSTNWEEVGKKDYEKEEERKAPEGMEWRKWG 389
            F+DE Y  A   +S  + T P DA AL  RAA  LKL++  +A  DA  A  L + L +A  R GVA F LE ++ AK AF RG+       E   +R+  W+RK   EL    E  + +  +              ++A  P +Q +    P     +P+G          ++VTV+IL K L +ED  V+++P+ L V V  DG+ +  F+ ALF+ +VP ES+ K+  TKVE+KL+K   G+ W +L  +       V T                  GPA    +KP    RPYAS +DW  +E+ I +ELE+EKPEG+EA+  LFRDIYAK  + TR+AM KSFQTSGGTVLSTNW+EV  KDYEK  ER AP GMEW+KWG
Sbjct:  532 FVDEAYEEAARCYSRALETQPQDADALSKRAAAFLKLHKLREAAADASRATELDATLHMAHLRHGVAQFELEKYAEAKRAFQRGKEAAPKGNEALLKRFQTWIRKCDAELDSDGEAELVIPDDPA-----------PVKALTPNNQSAAVVAP-----LPSG----------THVTVSILQKKLAQEDVEVTMEPKKLLVRVKLDGEVVEAFNEALFDEIVPAESSYKVLGTKVELKLKKNSNGMHWDKLEEVVYQTGTQVVT------------------GPAAVFEAKPESVPRPYASARDWNQIERAIGEELEAEKPEGEEAMQKLFRDIYAKADENTRKAMNKSFQTSGGTVLSTNWKEVADKDYEK--ERTAPNGMEWKKWG 872

[Close]

BLAST of EWM28086.1 vs. NCBI_GenBank
Match: gi|970660947|gb|KUF98456.1| (E3 ubiquitin-protein ligase Mdm2 [Phytophthora nicotianae])

HSP 1 Score: 255.758 bits (652), Expect = 1.382e-73
Identity = 156/398 (39.20%), Postives = 219/398 (55.03%), Query Frame = 0

Query:    8 FMDEDYATADELFSAYIATHPDDATALVSRAAVHLKLNQPSQALHDAEAAASLKSDLEVAWYRQGVAAFALEDFSRAKEAFMRGRALLGDRPEPQGRRYDVWLRKTTLELGEHDEQGMTVVAEGGIKELRQEQGAKGIEATVPRSQPSPTHPPSSAPAIPAGHVKFQFYQTTSYVTVTILYKGLREEDANVSVQPRHLKVSVGADGDA--LFDRALFETVVPEESTSKIFATKVEVKLRKAMEGLTWPELCALSPSAAASVHTVSAPTPDSHATALPSLAQGPATAPSSKPL---RPYASTKDWGAVEKEISKELESEKPEGDEALNTLFRDIYAKGSDETRRAMVKSF-----------QTSGGTVLSTNWEEVGKKDYEKEEERKAPEGMEWRKWG 389
            F+DE Y  A   ++  +   P DA AL  RAA +LKLN+  +A+ DA  A+ L   L +   R GVA F LE ++ AK  F RG+       E   +R+  W+RK   EL   DE+   V+ +  +           ++ + P +Q +    P   P  P   ++  +YQ+ ++VTV+IL K L ++D  VS++P+ L V V  DG+    ++ ALF+ V+P+ES  K+  +KVE+KL+K   G+ W +L  +   + A V T                  GPA    +KP    RPYAS++DW  +EK I  ELE+EKPEG+EA+  LFRDIYAK  + TR+AM KS            QTSGGTVLSTNW+EV  KDYEK  ER AP GMEW++WG
Sbjct:  542 FVDEAYEEAVRSYTRALEKQPQDADALSKRAAAYLKLNKLQEAVADASRASELDPTLHMTHMRHGVAQFELEKYAEAKRVFQRGKDTAPKADEALIKRFQTWIRKCDAELDTDDEE--LVIPDDPVP----------MQTSAPSNQGAAVVAP--LPMKPT--IRHDWYQSNTHVTVSILQKKLAQDDVEVSIEPKKLLVRVKLDGEMAEAYNEALFDEVIPDESAFKVLGSKVELKLKKKSSGMHWDKLEEVVYQSGAQVMT------------------GPAAVFEAKPEQVPRPYASSRDWNQIEKTIGDELEAEKPEGEEAMQKLFRDIYAKADENTRKAMNKSSYVAALRVVCSGQTSGGTVLSTNWKEVADKDYEK--ERTAPSGMEWKQWG 903

[Close]

BLAST of EWM28086.1 vs. NCBI_GenBank
Match: gi|1214701672|gb|OWZ14007.1| (GTP-binding protein Era [Phytophthora megakarya])

HSP 1 Score: 253.832 bits (647), Expect = 3.049e-73
Identity = 158/413 (38.26%), Postives = 214/413 (51.82%), Query Frame = 0

Query:    8 FMDEDYATADELFSAYIATHPDDATALVSRAAVHLKLNQPSQALHDAEAAASLKSDLEVAWYRQGVAAFALEDFSRAKEAFMRGRALLGDRPEPQGRRYDVWLRKTTLELGEHDE------------------QGMTVVAEGGIK-ELRQEQGAKGIEATVPRSQPSPTHP-------PSSAPAIPAGHVKFQFYQTTSYVTVTILYKGLREEDANVSVQPRHLKVSVGADGDAL--FDRALFETVVPEESTSKIFATKVEVKLRKAMEGLTWPELCALSPSAAASVHTVSAPTPDSHATALPSLAQGPATAPSSKPL---RPYASTKDWGAVEKEISKELESEKPEGDEALNTLFRDIYAKGSDETRRAMVKSFQTSGGTVLSTNWEEVGKKDYEKEEERKAPEGMEWRKWG 389
            F+DE Y  A   ++  +   P DA AL  RAA +LKL +  +A  DA  A  L + L +A  R GVA F LE ++ AK +F  G+       E   +R+  W+RK   EL   D+                  Q    V    +K  +R +    G   TV   Q    H        P     +        +YQ+ ++VTV+IL K L  E   VS++P+ L V V  DG+ +   +  LF+ +VPEES+ K+  TKVE+KLRK   G+ W +L                   ++   + P +  GPA    +KP    RPYAS++DW  +E+ I  ELE+EKPEG+EA+  LFRDIYAK  + TR+AM KSFQTSGGTVLSTNW+EV  KDYE+  ER AP GMEW+KWG
Sbjct:  448 FVDEAYEEAVHSYTRALEMQPQDADALSKRAAAYLKLYKLREAAADASRATELDATLHMAHMRHGVAQFELEKYAEAKRSFQAGKGATPKANEVLVKRFQTWIRKCDAELDSDDDELILPDEPAPVETSVPGNQSSAAVVPLPVKPSIRHDWYQSGTHVTVSILQKKLAHEHVEVSIEPKKLLVLRLYRCHHDWYQSGTHVTVSILQKKLAHEHVEVSIEPKKLLVRVKLDGEFVDALNETLFDEIVPEESSYKVLGTKVELKLRKKSNGMHWDKL------------------EEAVYQSGPQVVTGPAAVFEAKPEQVPRPYASSRDWNQIERAIGDELEAEKPEGEEAMQKLFRDIYAKADENTRKAMNKSFQTSGGTVLSTNWKEVADKDYER--ERTAPNGMEWKKWG 840

[Close]

BLAST of EWM28086.1 vs. NCBI_GenBank
Match: gi|953502469|emb|CEG36400.1| (sgs-domain-containing protein [Plasmopara halstedii])

HSP 1 Score: 241.506 bits (615), Expect = 4.262e-73
Identity = 146/387 (37.73%), Postives = 222/387 (57.36%), Query Frame = 0

Query:    8 FMDEDYATADELFSAYIATHPDDATALVSRAAVHLKLNQPSQALHDAEAAASLKSDLEVAWYRQGVAAFALEDFSRAKEAFMRGRALLGDRPEPQGRRYDVWLRKTTLELGEHDEQGMTVVAEGGIKELRQEQGAKGIEATVPRSQPSPTHPPSSAPAIPAGHVKFQFYQTTSYVTVTILYKGLREEDANVSVQPRHLKVSVGADGDAL--FDRALFETVVPEESTSKIFATKVEVKLRKAMEGLTWPELCALSPSAAASVHTVSAPTPDSHATALPSLAQGPATAPSSKPL---RPYASTKDWGAVEKEISKELESEKPEGDEALNTLFRDIYAKGSDETRRAMVKSFQTSGGTVLSTNWEEVGKKDYEKEEERKAPEGMEWRKWG 389
            F+DE Y  A + ++  +    ++A  L  RAAV+LKL +  +A  DA  A  L   L +A  R G+A F LE ++ AK++F  G+       E   +R+  W+RK   EL   +E  + ++++  +              +V RS  S     + AP      ++  +YQ++++VT+ IL K L ++D  ++++P  L V +  D D +  ++ ALF+ +VP+ES+ ++ ++K+E+KL+K   G+ W +L  ++  ++  V T                  GPA    +KP    RPYAS +DW  +EK I  ELE+EKPEG+EA+  LFRDIYAK  + TR+AM KSFQTSGGTVLSTNW+EV +KDYEK  ER AP+GMEW+KWG
Sbjct:   11 FVDEAYDEALQSYTRALKHQQENAEVLSKRAAVYLKLRKLHEAEGDASQATKLDPTLYMAHLRHGMAQFELEKYAEAKQSFQNGKEATPQVNEALIKRFQTWIRKCDAELDSENEADL-IISDDPV--------------SVQRSAGSDCGAAAIAPLPAKSVIRHDWYQSSTHVTLAILQKNLPQDDVEITIEPTRLLVRIKLDNDIVEAYNEALFDEIVPDESSYQVLSSKLELKLKKKSIGMHWDKLEEVTYKSSTQVLT------------------GPAAVFEAKPEQVPRPYASNRDWNRIEKTIGDELEAEKPEGEEAMQKLFRDIYAKADENTRKAMNKSFQTSGGTVLSTNWKEVAEKDYEK--ERTAPDGMEWKKWG 362

The following BLAST results are available for this feature:

BLAST of EWM28086.1 vs. NCBI_GenBank

BLAST of EWM28086.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10


Match Name	E-value	Identity	Description
gi\|585110429\|gb\|EWM28086.1\|	0.000e+0	100.00	suppressor of g2 allele of skp1 [Nannochloropsis g...	[more]
gi\|568023962\|gb\|ETL98007.1\|	3.326e-84	40.83	hypothetical protein L917_04843 [Phytophthora para...	[more]
gi\|675187261\|ref\|XP_008902515.1\|	3.548e-84	40.83	hypothetical protein PPTG_09337 [Phytophthora para...	[more]
gi\|570332356\|gb\|ETO80304.1\|	7.728e-84	40.57	hypothetical protein F444_05171 [Phytophthora para...	[more]
gi\|970648116\|gb\|KUF87749.1\|	2.947e-78	40.57	SGT1 A protein [Phytophthora nicotianae]	[more]
gi\|299470781\|emb\|CBN79827.1\|	1.207e-76	40.83	SGT1 homologue [Ectocarpus siliculosus]	[more]
gi\|695416323\|ref\|XP_009526808.1\|	3.902e-76	40.83	hypothetical protein PHYSODRAFT_498024 [Phytophtho...	[more]
gi\|970660947\|gb\|KUF98456.1\|	1.382e-73	39.20	E3 ubiquitin-protein ligase Mdm2 [Phytophthora nic...	[more]
gi\|1214701672\|gb\|OWZ14007.1\|	3.049e-73	38.26	GTP-binding protein Era [Phytophthora megakarya]	[more]
gi\|953502469\|emb\|CEG36400.1\|	4.262e-73	37.73	sgs-domain-containing protein [Plasmopara halstedi...	[more]

Relationships

This CDS is a part of the following mRNA feature(s):


Feature Name	Unique Name	Species	Type
rna2592	rna2592	Nannochloropsis gaditana (N. gaditana B-31)	mRNA

Sequences

Synonyms

Publications