EWM28083.1, cds2575 (CDS) Nannochloropsis gaditana

BLAST of EWM28083.1 vs. NCBI_GenBank
Match: gi|585110426|gb|EWM28083.1| (dna-directed rna polymerases and iii subunit rpabc3 [Nannochloropsis gaditana])

HSP 1 Score: 461.07 bits (1185), Expect = 1.879e-164
Identity = 221/221 (100.00%), Postives = 221/221 (100.00%), Query Frame = 0

Query:    1 MGHLLITFHCHSYTFVFQRRAILDRSDGPRFETRRSHLLRYPPLEAGWKVRYPRISQHLQGKAMSHNLFDDTFVITGLNPHKKRFARVDRLVGRSTLFEMDLILDINSEIYQVRQDDEIALMLAHTPYSDGKLDPKEYQHDMSSALMDQYEYVTYGKVFKIESAPSAGANVGGSKESKVAIMISFGGLLMKLSGDQKHVARISIDSPIYCFIRKTKTSRTT 221
            MGHLLITFHCHSYTFVFQRRAILDRSDGPRFETRRSHLLRYPPLEAGWKVRYPRISQHLQGKAMSHNLFDDTFVITGLNPHKKRFARVDRLVGRSTLFEMDLILDINSEIYQVRQDDEIALMLAHTPYSDGKLDPKEYQHDMSSALMDQYEYVTYGKVFKIESAPSAGANVGGSKESKVAIMISFGGLLMKLSGDQKHVARISIDSPIYCFIRKTKTSRTT
Sbjct:    1 MGHLLITFHCHSYTFVFQRRAILDRSDGPRFETRRSHLLRYPPLEAGWKVRYPRISQHLQGKAMSHNLFDDTFVITGLNPHKKRFARVDRLVGRSTLFEMDLILDINSEIYQVRQDDEIALMLAHTPYSDGKLDPKEYQHDMSSALMDQYEYVTYGKVFKIESAPSAGANVGGSKESKVAIMISFGGLLMKLSGDQKHVARISIDSPIYCFIRKTKTSRTT 221          

BLAST of EWM28083.1 vs. NCBI_GenBank
Match: gi|635369557|emb|CCI42344.1| (unnamed protein product [Albugo candida])

HSP 1 Score: 121.324 bits (303), Expect = 5.635e-31
Identity = 62/152 (40.79%), Postives = 94/152 (61.84%), Query Frame = 0

Query:   63 AMSHNLFDDTFVITGLNPHKKRFARVDRLVGRSTLFEMDLILDINSEIYQVRQDDEIALMLAHTPYSDGKLDPKEYQHDMSSALMDQYEYVTYGKVFKIESAPSAGANVGGSKESKVAIMISFGGLLMKLSGDQKHVARISIDSPIYCFIRK 214
            AM+  LF+D F +  LNP  K+F +V R+VG+   +E++L LDINSE+++++++D+    L  T   +GK D   Y     + L+D+Y+Y  YGK+F+ E         GG   + VAI  SFGGLLM+L G+Q+H+  +  DS IYC +RK
Sbjct:   36 AMATELFEDIFEVRQLNPEGKKFDKVTRVVGKGVSYELELTLDINSEVWRLKKNDKFTFALVSTLDLEGKPDDGIYNQSGKATLLDRYDYGMYGKIFQYEHE-------GG---NNVAIYASFGGLLMRLRGEQRHLHLVHNDSRIYCLLRK 177          

BLAST of EWM28083.1 vs. NCBI_GenBank
Match: gi|635369558|emb|CCI42345.1| (unnamed protein product [Albugo candida])

HSP 1 Score: 119.783 bits (299), Expect = 6.140e-31
Identity = 61/151 (40.40%), Postives = 93/151 (61.59%), Query Frame = 0

Query:   64 MSHNLFDDTFVITGLNPHKKRFARVDRLVGRSTLFEMDLILDINSEIYQVRQDDEIALMLAHTPYSDGKLDPKEYQHDMSSALMDQYEYVTYGKVFKIESAPSAGANVGGSKESKVAIMISFGGLLMKLSGDQKHVARISIDSPIYCFIRK 214
            M+  LF+D F +  LNP  K+F +V R+VG+   +E++L LDINSE+++++++D+    L  T   +GK D   Y     + L+D+Y+Y  YGK+F+ E         GG   + VAI  SFGGLLM+L G+Q+H+  +  DS IYC +RK
Sbjct:    1 MATELFEDIFEVRQLNPEGKKFDKVTRVVGKGVSYELELTLDINSEVWRLKKNDKFTFALVSTLDLEGKPDDGIYNQSGKATLLDRYDYGMYGKIFQYEHE-------GG---NNVAIYASFGGLLMRLRGEQRHLHLVHNDSRIYCLLRK 141          

BLAST of EWM28083.1 vs. NCBI_GenBank
Match: gi|299116477|emb|CBN76194.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 119.013 bits (297), Expect = 1.682e-30
Identity = 60/153 (39.22%), Postives = 94/153 (61.44%), Query Frame = 0

Query:   64 MSHNLFDDTFVITGLNPHKKRFARVDRLVGRSTLFEMDLILDINSEIYQVRQDDEIALMLAHTPYSDGKLDPKEYQH-DMSSALMDQYEYVTYGKVFKIESAPSAGANVGGSKESKVAIMISFGGLLMKLSGDQKHVARISIDSPIYCFIRKT 215
            MS  LF+D F +  LNP  K+F RV+RL  +   ++MDL+LD N +IY V++ + +  ++A T    GK D   Y+      +L D+YEYV +G+V++ +            K++KV +  SFGGLLM+L+GDQ+HVA I +DS ++C +R+ 
Sbjct:    1 MSGVLFEDIFEVGKLNPDGKKFDRVNRLECKGVTYDMDLLLDTNCDIYPVKEGERLTFVIASTLDLSGKPDDGTYKPLGDEVSLADKYEYVMHGRVYRFDQ----------QKDTKVQVFASFGGLLMRLTGDQRHVANIEVDSRVFCLLRRN 143          

BLAST of EWM28083.1 vs. NCBI_GenBank
Match: gi|1183328807|gb|ORX58555.1| (RNA polymerase [Piromyces finnis])

HSP 1 Score: 118.627 bits (296), Expect = 2.420e-30
Identity = 65/154 (42.21%), Postives = 90/154 (58.44%), Query Frame = 0

Query:   62 KAMSHNLFDDTFVITGLNPHKKRFARVDRLVGRSTLFEMDLILDINSEIYQVRQDDEIALMLAHTPYSDGKLDPKEYQHDMSSALMDQYEYVTYGKVFKIESAPSAGANVGGSKESKVAIMISFGGLLMKLSGDQKHVARISIDSPIYCFIRKT 215
            ++  + LF D F I   +   K+F RV R+ GRS  +EMDL LD+N+EIY +   D+ ALMLA +   DG    + ++ D+  +L D YEYV YGKVFK +           S  SKV+I IS+GGLLM L GD +H+  I +   IY  +RK+
Sbjct:    2 ESQDNKLFSDVFEIVEKDKGGKKFDRVSRIQGRSENYEMDLTLDVNTEIYPIEIGDKFALMLASSLSLDGAEKTEIWREDLKDSLADDYEYVMYGKVFKYDD----------SNGSKVSIYISYGGLLMCLEGDYRHLQNIEVGKFIYLLMRKS 145          

BLAST of EWM28083.1 vs. NCBI_GenBank
Match: gi|953496375|emb|CEG41975.1| (dnadirected rna polymerase i [Plasmopara halstedii])

HSP 1 Score: 117.087 bits (292), Expect = 1.524e-29
Identity = 63/156 (40.38%), Postives = 94/156 (60.26%), Query Frame = 0

Query:   62 KAMSHNLFDDTFVITGLNPHKKRFARVDRLVGRSTLFEMDLILDINSEIYQVRQDDEIALMLAHTPYSDGKLDPKEYQHDMSSALMDQYEYVTYGKVFKIESAPSAGANVGGSKESKVAIMISFGGLLMKLSGDQKHVARISIDSPIYCFIRKTKT 217
            K M+  LF+D F +  LNP  K+F +V R+V +   +E++L LDINSE+Y++RQ+++  L L  T   +GK D   +       L+D+Y+Y  YGKVF+ +     G N+       VAI  SFGGLLM L G+Q+H+  I  D+ IYC +RK ++
Sbjct:   15 KPMATELFEDIFEVRQLNPDGKKFDKVTRVVCKGVSYELELTLDINSEVYRLRQNEKFTLALVSTLDLEGKPDDGIFNQSGKPTLLDRYDYGMYGKVFQYD---HEGGNM-------VAIYASFGGLLMCLRGEQRHLHMIHNDTRIYCLLRKQES 160          

BLAST of EWM28083.1 vs. NCBI_GenBank
Match: gi|1183327163|gb|ORX56921.1| (RNA polymerase, partial [Hesseltinella vesiculosa])

HSP 1 Score: 116.316 bits (290), Expect = 1.570e-29
Identity = 70/156 (44.87%), Postives = 95/156 (60.90%), Query Frame = 0

Query:   68 LFDDTFVITGLNPHKKRFARVDRLVGRSTLFEMDLILDINSEIYQVRQDDEIALMLAHTPYSDGK--LDPKEY-------QHDMSSALMDQYEYVTYGKVFKIESAPSAGANVGGSKESKVAIMISFGGLLMKLSGDQKHVARISIDSPIYCFIRK 214
            LF D F I  +NP+ KRF RV R++ RS  FEM+L LDINSE+Y V   D+++ +LA T   D     D +E        +HD+S    D+YEYV YGKV++ E   SAGA+  G    KV++  SFGGLLM L GD +H+ +I++   IY  +RK
Sbjct:    1 LFQDIFDIKDVNPNGKRFDRVSRVIARSENFEMELTLDINSELYPVDIADKVSFVLASTLSLDASAGTDTRESWRERAPGEHDLS----DEYEYVMYGKVYRYED--SAGASGNG---QKVSVYASFGGLLMCLEGDYRHLQKINVGEHIYLLMRK 147          

BLAST of EWM28083.1 vs. NCBI_GenBank
Match: gi|532090801|ref|XP_005331091.1| (DNA-directed RNA polymerases I, II, and III subunit RPABC3 isoform X1 [Ictidomys tridecemlineatus])

HSP 1 Score: 117.472 bits (293), Expect = 2.642e-29
Identity = 67/177 (37.85%), Postives = 99/177 (55.93%), Query Frame = 0

Query:   39 LRYPPLEAGWKVRYPRISQHLQGKAMSHNLFDDTFVITGLNPHKKRFARVDRLVGRSTLFEMDLILDINSEIYQVRQDDEIALMLAHTPYSDGKLDPKEYQ-HDMSSALMDQYEYVTYGKVFKIESAPSAGANVGGSKESKVAIMISFGGLLMKLSGDQKHVARISIDSPIYCFIRK 214
            +R PP+ A W      +   L    M+  LF+D F +  ++P  K+F RV RL   S  F+MDLILD+N +IY V   D+  L++A T Y DG LD  EY   D   +  DQ+EYV YGKV++IE     G        ++++  +S+GGLLM+L GD  ++    +DS +Y  ++K
Sbjct:   25 VREPPVVAVWSA----LLWSLGPLTMAGILFEDIFDVKDIDPEGKKFDRVSRLHCESESFKMDLILDVNIQIYPVDLGDKFRLVIASTLYEDGTLDDGEYNPTDDRPSRADQFEYVMYGKVYRIE-----GDETSTEAATRLSAYVSYGGLLMRLQGDANNLHGFEVDSRVYLLMKK 192          

BLAST of EWM28083.1 vs. NCBI_GenBank
Match: gi|1008779464|ref|XP_006987802.2| (PREDICTED: DNA-directed RNA polymerases I, II, and III subunit RPABC3 isoform X2 [Peromyscus maniculatus bairdii])

HSP 1 Score: 117.472 bits (293), Expect = 2.713e-29
Identity = 66/165 (40.00%), Postives = 95/165 (57.58%), Query Frame = 0

Query:   51 RYPRISQHLQGKAMSHNLFDDTFVITGLNPHKKRFARVDRLVGRSTLFEMDLILDINSEIYQVRQDDEIALMLAHTPYSDGKLDPKEYQ-HDMSSALMDQYEYVTYGKVFKIESAPSAGANVGGSKESKVAIMISFGGLLMKLSGDQKHVARISIDSPIYCFIRK 214
            R P  S  L   AM+  LF+D F +  ++P  K+F RV RL   S  F+MDLILD+N +IY V   D+  L++A T Y DG LD  EY   D   +  DQ+EYV YGKV++IE     G        ++++  +S+GGLLM+L GD  ++    +DS +Y  ++K
Sbjct:   34 RAPGASAALVPLAMAGILFEDIFDVKDIDPEGKKFDRVSRLHCESESFKMDLILDVNIQIYPVDLGDKFRLVIASTLYEDGTLDDGEYNPTDDRPSRADQFEYVMYGKVYRIE-----GDETSTEAATRLSAYVSYGGLLMRLQGDANNLHGFEVDSRVYLLMKK 193          

BLAST of EWM28083.1 vs. NCBI_GenBank
Match: gi|1072235303|gb|OEU20032.1| (RNA polymerase [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 115.546 bits (288), Expect = 3.523e-29
Identity = 61/148 (41.22%), Postives = 86/148 (58.11%), Query Frame = 0

Query:   68 LFDDTFVITGLNPHKKRFARVDRLVGRSTLFEMDLILDINSEIYQVRQDDEIALMLAHTPYSDGK-LDPKEYQHDMSSALMDQYEYVTYGKVFKIESAPSAGANVGGSKESKVAIMISFGGLLMKLSGDQKHVARISIDSPIYCFIRK 214
            LF+D F +T LNP   +F RV+R+    T FE DL+LDIN EIY +R+ D++ L+LA T + DG   D   Y       L D YEYV +G+VF I             K+    + +SFGGLLM+L+GDQ+H+A +  D  +Y  ++K
Sbjct:    9 LFEDIFEVTALNPDGYKFDRVNRIQAVGTTFECDLLLDINCEIYNLREADKVTLVLASTLHLDGSPADHLSYSPSTEPTLADNYEYVMHGRVFDISY----------KKDGTAVLALSFGGLLMRLTGDQRHLANVLPDMRLYLLLKK 146