EWM28130.1, cds2565 (CDS) Nannochloropsis gaditana

Overview
NameEWM28130.1
Unique Namecds2565
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002459.1:695737..697887 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM28130.1
Producttetratricopeptide repeat family protein
Orig transcript idgnl|cribi|Naga_100036g10.2550.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:695737..697887 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR029063SAM-dependent_MTases
IPR013026TPR-contain_dom
IPR011990TPR-like_helical_dom
IPR019734TPR_repeat
Homology
[Close]
BLAST of EWM28130.1 vs. NCBI_GenBank
Match: gi|585110474|gb|EWM28130.1| (tetratricopeptide repeat family protein [Nannochloropsis gaditana])

HSP 1 Score: 1482.62 bits (3837), Expect = 0.000e+0
Identity = 716/716 (100.00%), Postives = 716/716 (100.00%), Query Frame = 0 
Query:    1 METSPGGASAVFPPLSSTLEESGPENVTGGESILPPTSCPHVLPPHGSFPSSGQASSHSSSTTLPHRCVLEDFTRCSESHLWKLMMSFYDRKGVESWSQGIVPHFITCNAFIGRAYAQVFQGYLRDCAKKARENGPVCSALDPSEPLYIIELGAGSGKFSFFMLKALEEMRELLDFPFEKIVYVMTDFTKNHFNFWETHPGLHKYIAQGSLDLAIFDAVHDSVIRLSHAGTVLAPGSVKNPMCLIANYLFDTLCHDVFQVDGGVLKEGLISVGSKQAQEPDPLDPEIIKRFHNLFQYQPVTPDYYAHTHQPAHRPGHAPMGSPPSSSEPLSAGTNGSSDREDSLHLGRILHWYRDYFGRSSTGGSFLFPIGALRALRRLLAFSNDRGLVISGDKGSNQAEQFRGLVDPHIAVHGSFSVMVNYHAIGLYFISRGGFALHNPQEDASLKVSAFVLSGRAGPPESPSEDSPPEAHSPVTTTTSCLDTSPSSWAGPNAESEGEKRVRAFPCLRAAFSTAVDQFGPNDFFVLQKSMKEDSPNPTLKAIVALLKLGDWDPDVFYKFRETILNQVPTAGQKLRNDLCRGVPRVWEHHYMLDRDKDIAFEIGRFYYGIREYERALGFYSLSSTSIGEHHVTCHNMGLCHYSLGRLQQALEHFERSLALNASYEKAWSWQQKVLQELNPSPSPSPGPVVHETRCLDFPEVGNLSLAARRGGDRRP 716
            METSPGGASAVFPPLSSTLEESGPENVTGGESILPPTSCPHVLPPHGSFPSSGQASSHSSSTTLPHRCVLEDFTRCSESHLWKLMMSFYDRKGVESWSQGIVPHFITCNAFIGRAYAQVFQGYLRDCAKKARENGPVCSALDPSEPLYIIELGAGSGKFSFFMLKALEEMRELLDFPFEKIVYVMTDFTKNHFNFWETHPGLHKYIAQGSLDLAIFDAVHDSVIRLSHAGTVLAPGSVKNPMCLIANYLFDTLCHDVFQVDGGVLKEGLISVGSKQAQEPDPLDPEIIKRFHNLFQYQPVTPDYYAHTHQPAHRPGHAPMGSPPSSSEPLSAGTNGSSDREDSLHLGRILHWYRDYFGRSSTGGSFLFPIGALRALRRLLAFSNDRGLVISGDKGSNQAEQFRGLVDPHIAVHGSFSVMVNYHAIGLYFISRGGFALHNPQEDASLKVSAFVLSGRAGPPESPSEDSPPEAHSPVTTTTSCLDTSPSSWAGPNAESEGEKRVRAFPCLRAAFSTAVDQFGPNDFFVLQKSMKEDSPNPTLKAIVALLKLGDWDPDVFYKFRETILNQVPTAGQKLRNDLCRGVPRVWEHHYMLDRDKDIAFEIGRFYYGIREYERALGFYSLSSTSIGEHHVTCHNMGLCHYSLGRLQQALEHFERSLALNASYEKAWSWQQKVLQELNPSPSPSPGPVVHETRCLDFPEVGNLSLAARRGGDRRP
Sbjct:    1 METSPGGASAVFPPLSSTLEESGPENVTGGESILPPTSCPHVLPPHGSFPSSGQASSHSSSTTLPHRCVLEDFTRCSESHLWKLMMSFYDRKGVESWSQGIVPHFITCNAFIGRAYAQVFQGYLRDCAKKARENGPVCSALDPSEPLYIIELGAGSGKFSFFMLKALEEMRELLDFPFEKIVYVMTDFTKNHFNFWETHPGLHKYIAQGSLDLAIFDAVHDSVIRLSHAGTVLAPGSVKNPMCLIANYLFDTLCHDVFQVDGGVLKEGLISVGSKQAQEPDPLDPEIIKRFHNLFQYQPVTPDYYAHTHQPAHRPGHAPMGSPPSSSEPLSAGTNGSSDREDSLHLGRILHWYRDYFGRSSTGGSFLFPIGALRALRRLLAFSNDRGLVISGDKGSNQAEQFRGLVDPHIAVHGSFSVMVNYHAIGLYFISRGGFALHNPQEDASLKVSAFVLSGRAGPPESPSEDSPPEAHSPVTTTTSCLDTSPSSWAGPNAESEGEKRVRAFPCLRAAFSTAVDQFGPNDFFVLQKSMKEDSPNPTLKAIVALLKLGDWDPDVFYKFRETILNQVPTAGQKLRNDLCRGVPRVWEHHYMLDRDKDIAFEIGRFYYGIREYERALGFYSLSSTSIGEHHVTCHNMGLCHYSLGRLQQALEHFERSLALNASYEKAWSWQQKVLQELNPSPSPSPGPVVHETRCLDFPEVGNLSLAARRGGDRRP 716
[Close]
BLAST of EWM28130.1 vs. NCBI_GenBank
Match: gi|298708220|emb|CBJ30559.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 793.882 bits (2049), Expect = 0.000e+0
Identity = 384/614 (62.54%), Postives = 449/614 (73.13%), Query Frame = 0 
Query:   66 HRCVLEDFTRCSESHLWKLMMSFYDRKGVESWSQGIVPHFITCNAFIGRAYAQVFQGYLRDCAKKARENGPVCSALDPSEPLYIIELGAGSGKFSFFMLKALEEMRELLDFPFEKIVYVMTDFTKNHFNFWETHPGLHKYIAQGSLDLAIFDAVHDSVIRLSHAGTVLAPGSVKNPMCLIANYLFDTLCHDVFQVDGGVLKEGLISVGSKQAQEPDPLDPEIIKRFHNLFQYQPVTPDYYAHTHQPAHRPGHAPMGSPPSSSEPLSAGTNGSSDREDSLHLGRILHWYRDYFGRSSTGGSFLFPIGALRALRRLLAFSNDRGLVISGDKGSNQAEQFRGLVDPHIAVHGSFSVMVNYHAIGLYFISRGGFALHNPQEDASLKVSAFVLSGRAGPPESPSEDSPPEAHSPVTTTTSCLDTSPSSWAGPNAESEGEKRVRAFPCLRAAFSTAVDQFGPNDFFVLQKSMKEDSPNPTLKAIVALLKLGDWDPDVFYKFRETILNQVPTAGQKLRNDLCRGVPRVWEHHYMLDRDKDIAFEIGRFYYGIREYERALGFYSLSSTSIGEHHVTCHNMGLCHYSLGRLQQALEHFERSLALNASYEKAWSWQQKVLQELN 679
             RCVLEDFT+CS+SHLWKLMMSFYDRKGVESWSQGIVPHFITCNAFIGR+YAQV  G+LRDC +     G     LDP+EPLYIIELG GSGKFSFFMLKAL EM+E+ DFP EK+VYVMTDFT+++F FW  HP L  ++  G LD+AIFDAV+D+ I+LS +G +L PG+  NP+C++ANYLFDTLCHD+FQVD G  KEGLISVGS Q  EPDPLDPEII+R  N F YQ +  DYY                               + +  D  H  RIL WY DY  + S G S LFP+GALRALRRL+ FS++R  VISGDKG+N  EQF+GL+DPHIAVHGSFSVMVNYH+IG YF SRGGFALHNPQE+ASLKVS FVL+G +G                        D     W G   + +  +R   FP L AAF T V+QFGPNDFFV+QK MKED+  PTLK++VALLKLGDWDPDVFYKFR+TILNQV TA  KL+ DLCRG+PRVW ++YMLD+DKD+AFEIGRFYYGIREYE ALGFY  SS S+G+HHVT HNMGLC+YS+G L QA  +FE +L +NA+YEKA SWQ+KV QELN
Sbjct:  103 ERCVLEDFTQCSKSHLWKLMMSFYDRKGVESWSQGIVPHFITCNAFIGRSYAQVLSGFLRDCVR-----GAGGMKLDPTEPLYIIELGTGSGKFSFFMLKALLEMKEVCDFPVEKMVYVMTDFTESNFKFWAEHPVLKPFLDSGQLDMAIFDAVNDTTIKLSRSGVLLGPGTCVNPICVVANYLFDTLCHDIFQVDQGKAKEGLISVGSTQKDEPDPLDPEIIQRLDNRFSYQDIPDDYY-------------------------------TDEDGDEPHFKRILDWYVDYAAQGSGGMSILFPVGALRALRRLMTFSDNRAFVISGDKGNNNPEQFKGLMDPHIAVHGSFSVMVNYHSIGAYFTSRGGFALHNPQEEASLKVSTFVLTGDSG------------------------DDEDGEWTGEAMDRKDSERSSQFPHLEAAFRTNVEQFGPNDFFVMQKCMKEDAATPTLKSVVALLKLGDWDPDVFYKFRDTILNQVSTAVTKLKKDLCRGIPRVWSNYYMLDKDKDVAFEIGRFYYGIREYENALGFYRDSSESVGQHHVTFHNMGLCYYSMGDLHQAKINFELALDMNANYEKAKSWQRKVHQELN 656
[Close]
BLAST of EWM28130.1 vs. NCBI_GenBank
Match: gi|676396745|ref|XP_009041650.1| (hypothetical protein AURANDRAFT_39295 [Aureococcus anophagefferens] >gi|323447737|gb|EGB03648.1| hypothetical protein AURANDRAFT_39295 [Aureococcus anophagefferens])

HSP 1 Score: 719.924 bits (1857), Expect = 0.000e+0
Identity = 355/615 (57.72%), Postives = 425/615 (69.11%), Query Frame = 0 
Query:   67 RCVLEDFTRCSESHLWKLMMSFYDRKGVESWSQGIVPHFITCNAFIGRAYAQVFQGYLRDCAKKARENGPVCSALDPSEPLYIIELGAGSGKFSFFMLKALEEMRELLDFPFEKIVYVMTDFTKNHFNFWETHPGLHKYIAQGSLDLAIFDAVHDSVIRLSHAGTVLAPGSVKNPMCLIANYLFDTLCHDVFQVDGGVLKEGLISVGSKQAQEPDPLDPEIIKRFHNLFQYQPVTPDYYAHTHQPAHRPGHAPMGSPPSSSEPLSAGTNGSSDREDSLHLGRILHWYRDYFGRSSTGGSFLFPIGALRALRRLLAFSNDRGLVISGDKGSNQAEQFRGLVDPHIAVHGSFSVMVNYHAIGLYFISRGGFALHNPQEDASLKVSAFVLSGRAGPPESPSEDSPPEAHSPVTTT---TSCLDTSPS-SWAGPNAESEGEKRVRAFPCLRAAFSTAVDQFGPNDFFVLQKSMKEDSPNPTLKAIVALLKLGDWDPDVFYKFRETILNQVPTAGQKLRNDLCRGVPRVWEHHYMLDRDKDIAFEIGRFYYGIREYERALGFYSLSSTSIGEHHVTCHNMGLCHYSLGRLQQALEHFERSLALNASYEKAWSWQQKVLQE 677
            RCVLEDFTRCS+S LWKLMMSFYDRKGVESWSQGIVPHFI CNAFIGR                          LD SEPLYI+ELGAGSGKFSFFMLKA+ E+  LL+FP  K+VYVMTDFT N+  FW  H  L  YI  G LD+AIFDAV+D  I+L H+  ++ P +++NP+C+IANYLFDTLCHD+FQV+ G LKEGLISVGS++  E DPLDPEIIKRF N FQY+ V  DYY                                 + ED+ H  RIL WYRD+FG S +G S L PIGALRALRRL +F+  R LV+SGDKG+N  EQFRGL+DPH+AVHGSFSVMVNYHAIGLY  SR GF LH+PQE+ASLKVSA V +G +    SP  DS    ++    T   +S  D   + +W G   E     R  AFP L   F  ++  FGPNDFFV+QKSMKED+  P LKAIVALLKL +WDPDVFYKFR+ IL QVPT   KLR+DLCR +P +W +H++LD+DKD+AFE+GR YYG+R YE A+ FY +S  S GEHHVT HNMGLC+YSLG+L+ A+E+F ++L L   Y KA +WQQK+L+E
Sbjct:   11 RCVLEDFTRCSDSLLWKLMMSFYDRKGVESWSQGIVPHFIPCNAFIGRTSVYAL-------------------PLDSSEPLYIVELGAGSGKFSFFMLKAINELSGLLNFPCTKLVYVMTDFTWNNLKFWNEHESLRLYIDNGQLDVAIFDAVNDESIKLYHSDLLICPSTMRNPICVIANYLFDTLCHDIFQVENGELKEGLISVGSRKDLEDDPLDPEIIKRFDNQFQYRVVDEDYYTKL------------------------------EVEDARHFKRILRWYRDFFGNSQSGASILLPIGALRALRRLTSFAGGRALVLSGDKGNNNHEQFRGLMDPHVAVHGSFSVMVNYHAIGLYCTSRSGFVLHDPQEEASLKVSALVFTGESSTC-SPLSDSADRTYAKCVETRASSSSFDLCETQAWTGNEVERLSAARSIAFPYLCRTFRDSIISFGPNDFFVMQKSMKEDTQRPALKAIVALLKLSNWDPDVFYKFRDVILQQVPTCTIKLRSDLCRNLPYIWANHFILDKDKDVAFEVGRLYYGLRMYEDAVRFYCISVASSGEHHVTFHNMGLCYYSLGQLEVAMENFNKALWLKNDYAKARAWQQKLLRE 575
[Close]
BLAST of EWM28130.1 vs. NCBI_GenBank
Match: gi|676397421|ref|XP_009041988.1| (hypothetical protein AURANDRAFT_55597 [Aureococcus anophagefferens] >gi|323447385|gb|EGB03308.1| hypothetical protein AURANDRAFT_55597 [Aureococcus anophagefferens])

HSP 1 Score: 699.123 bits (1803), Expect = 0.000e+0
Identity = 347/616 (56.33%), Postives = 414/616 (67.21%), Query Frame = 0 
Query:   66 HRCVLEDFTRCSESHLWKLMMSFYDRKGVESWSQGIVPHFITCNAFIGRAYAQVFQGYLRDCAKKARENGPVCSALDPSEPLYIIELGAGSGKFSFFMLKALEEMRELLDFPFEKIVYVMTDFTKNHFNFWETHPGLHKYIAQGSLDLAIFDAVHDSVIRLSHAGTVLAPGSVKNPMCLIANYLFDTLCHDVFQVDGGVLKEGLISVGSKQAQEPDPLDPEIIKRFHNLFQYQPVTPDYYAHTHQPAHRPGHAPMGSPPSSSEPLSAGTNGSSDREDSLHLGRILHWYRDYFGRSSTGGSFLFPIGALRALRRLLAFSNDRGLVISGDKGSNQAEQ----FRGLVDPHIAVHGSFSVMVNYHAIGLYFISRGGFALHNPQEDASLKVSAFVLSGRAGPPESPSEDSPPEAHSPVTTTTSCLDTSPSSWAGPNAESEGEKRVRAFPCLRAAFSTAVDQFGPNDFFVLQKSMKEDSPNPTLKAIVALLKLGDWDPDVFYKFRETILNQVPTAGQKLRNDLCRGVPRVWEHHYMLDRDKDIAFEIGRFYYGIREYERALGFYSLSSTSIGEHHVTCHNMGLCHYSLGRLQQALEHFERSLALNASYEKAWSWQQKVLQE 677
             RCVLEDFTRCS+S LWKLMMSFYDRKGVESWSQGIVPHFITCNAFIGRAYA+V   + RDC     +       +D SEPLY++ELGAGSGKF+FF+L A++E+  +LD P  +IVYVMTDFT N+  FW  H  L +Y   G LD+AIFDAV+D  IRL H+G V+   ++ NP+C+IANYLFDTLCHD+FQV+ G LKEGLISVGS+   E DPLDPEIIKRF N F Y+ +  DYY+                              +S+RED+ H  RIL WYRD+FG S  G S L PIGALRALRRL +FS+ R LV+SGDKG+N  EQ    FRGL+DPH+AVHGSFSVMVNYHAIGLY  SR GF LH+PQE+ASLKVS                                                   R  AFP L  +F  ++  FGPNDFFV+QKSMKEDS  P LKAIV LLKL +WDPDVFYKFR+ IL QVPT   KLRNDLCR +PRVW  H++LD+DKD+AFE+GR YYG+R Y++A+ FY  S    GEHHVT HNMGLCHYSL +L  A+++F R+L L + Y KA +WQQK+L+E
Sbjct:    5 QRCVLEDFTRCSDSVLWKLMMSFYDRKGVESWSQGIVPHFITCNAFIGRAYAKVLFSFFRDCMHSDAK-----LPIDASEPLYVVELGAGSGKFTFFILSAMKELAGILDLPLSRIVYVMTDFTWNNLKFWNDHESLRQYFECGLLDIAIFDAVNDESIRLQHSGVVITQDTLGNPICVIANYLFDTLCHDIFQVENGELKEGLISVGSRNEYEQDPLDPEIIKRFDNQFLYRAIDDDYYS------------------------------TSEREDACHFKRILRWYRDFFGESPGGASILLPIGALRALRRLTSFSSGRALVLSGDKGNNNHEQPKPVFRGLMDPHVAVHGSFSVMVNYHAIGLYCTSRSGFVLHDPQEEASLKVSV--------------------------------------------------RSLAFPNLCRSFYDSIISFGPNDFFVMQKSMKEDSQRPALKAIVVLLKLSNWDPDVFYKFRDVILQQVPTCTIKLRNDLCRNLPRVWTQHFLLDKDKDVAFEVGRLYYGLRMYQKAIQFYRTSIQFSGEHHVTFHNMGLCHYSLDQLDSAMKNFNRALLLKSDYAKARAWQQKLLRE 535
[Close]
BLAST of EWM28130.1 vs. NCBI_GenBank
Match: gi|567966845|gb|ETK92037.1| (hypothetical protein L915_04550 [Phytophthora parasitica] >gi|567995280|gb|ETL45419.1| hypothetical protein L916_04504 [Phytophthora parasitica] >gi|568024566|gb|ETL98598.1| hypothetical protein L917_04383 [Phytophthora parasitica] >gi|570956972|gb|ETP21951.1| hypothetical protein F441_04652 [Phytophthora parasitica CJ01A1] >gi|570992335|gb|ETP49854.1| hypothetical protein F442_04714 [Phytophthora parasitica P10297])

HSP 1 Score: 682.559 bits (1760), Expect = 0.000e+0
Identity = 332/612 (54.25%), Postives = 417/612 (68.14%), Query Frame = 0 
Query:   67 RCVLEDFTRCSESHLWKLMMSFYDRKGVESWSQGIVPHFITCNAFIGRAYAQVFQGYLRDCAKKARENGPVCSALDPSEPLYIIELGAGSGKFSFFMLKALEEMRELLDFPFEKIVYVMTDFTKNHFNFWETHPGLHKYIAQGSLDLAIFDAVHDSVIRLSHAGTVLAPGSVKNPMCLIANYLFDTLCHDVFQVDGGVLKEGLISVGSKQAQEPDPLDPEIIKRFHNLFQYQPVTPDYYAHTHQPAHRPGHAPMGSPPSSSEPLSAGTNGSSDREDSLHLGRILHWYRDYFGRSSTGGSFLFPIGALRALRRLLAFSNDRGLVISGDKGSNQAEQFRGLVDPHIAVHGSFSVMVNYHAIGLYFISRGGFALHNPQEDASLKVSAFVLSGRAGPPESPSEDSPPEAHSPVTTTTSCLDTSPSSWAGPNAESEGEKRVRAFPCLRAAFSTAVDQFGPNDFFVLQKSMKEDSPNPTLKAIVALLKLGDWDPDVFYKFRETILNQVPTAGQKLRNDLCRGVPRVWEHHYMLDRDKDIAFEIGRFYYGIREYERALGFYSLSSTSIGEHHVTCHNMGLCHYSLGRLQQALEHFERSLALNASYEKAWSWQQKVLQEL 678
            RC LEDFT  +  HLWKLMMSFYDR+GVESW+QGIVPHFIT N FI + Y+ V   Y RD  K         S +DPS+P YI+ELGAGSGKFSF+ LKAL +M  +LDFP   I Y+MTDFT+ +FNFW+THP L  ++ +G +D AIFDA  D+ +RL  +G V+ P  + NP+CLIANYLFDTL HD+FQVDGG+LKEGL+SVGSK+A+EPDPLDPEIIKR +N+F+Y  +   YY  T     RP                             H   IL WY +YF  +STG + L PIGAL A+ RL A S +  + +SGDKG+N  + FRG+ DPHIAVHGSFSVMVNYHAIG+YF SRGGFALH+PQE+ASLKVSAFVL      P + + +S  EAHS   T             G   +   EKR R FP L  AF+  +  FGPNDFFV+QKS KED+  P+LKA++AL+KL  WDPDVFYKFR+ +L+Q P A  KL+ D+  G+P VW+++Y LD++KD+AFEIGR YYG+ EY+ AL +Y+LS+  +G+HHVT HNMGLCHYS  +L+ A   FE +  LN SY+KA +W Q+V +EL
Sbjct:   75 RCQLEDFTPFARCHLWKLMMSFYDRQGVESWAQGIVPHFITSNTFIAKRYSNVLSAYFRDALKTGS-----MSPVDPSQPFYIVELGAGSGKFSFYFLKALAQMESVLDFPLSNIRYIMTDFTEQNFNFWKTHPALAPFVKRGIVDFAIFDATTDTELRLYSSGQVIRPNDLINPLCLIANYLFDTLYHDLFQVDGGILKEGLVSVGSKRAEEPDPLDPEIIKRLNNIFKYDQIDEAYYGET-----RP-----------------------------HCNNILKWYHEYFDPASTGATILVPIGALSAIERLAALSKNGLVALSGDKGNNNPDHFRGVSDPHIAVHGSFSVMVNYHAIGVYFASRGGFALHSPQEEASLKVSAFVL------PANAARES--EAHSSAMT----------GLYGDGLDKTSEKRSRQFPHLTTAFNDEIVSFGPNDFFVMQKSTKEDAKTPSLKAVLALMKLSGWDPDVFYKFRDVLLDQSPAAAPKLKQDVVYGIPMVWKNYYALDKEKDVAFEIGRLYYGLHEYDSALAYYTLSAQEMGKHHVTSHNMGLCHYSKKQLELAATCFEEAYTLNRSYQKAATWLQRVRKEL 629
[Close]
BLAST of EWM28130.1 vs. NCBI_GenBank
Match: gi|570332975|gb|ETO80923.1| (hypothetical protein F444_04696 [Phytophthora parasitica P1976])

HSP 1 Score: 682.174 bits (1759), Expect = 0.000e+0
Identity = 332/612 (54.25%), Postives = 417/612 (68.14%), Query Frame = 0 
Query:   67 RCVLEDFTRCSESHLWKLMMSFYDRKGVESWSQGIVPHFITCNAFIGRAYAQVFQGYLRDCAKKARENGPVCSALDPSEPLYIIELGAGSGKFSFFMLKALEEMRELLDFPFEKIVYVMTDFTKNHFNFWETHPGLHKYIAQGSLDLAIFDAVHDSVIRLSHAGTVLAPGSVKNPMCLIANYLFDTLCHDVFQVDGGVLKEGLISVGSKQAQEPDPLDPEIIKRFHNLFQYQPVTPDYYAHTHQPAHRPGHAPMGSPPSSSEPLSAGTNGSSDREDSLHLGRILHWYRDYFGRSSTGGSFLFPIGALRALRRLLAFSNDRGLVISGDKGSNQAEQFRGLVDPHIAVHGSFSVMVNYHAIGLYFISRGGFALHNPQEDASLKVSAFVLSGRAGPPESPSEDSPPEAHSPVTTTTSCLDTSPSSWAGPNAESEGEKRVRAFPCLRAAFSTAVDQFGPNDFFVLQKSMKEDSPNPTLKAIVALLKLGDWDPDVFYKFRETILNQVPTAGQKLRNDLCRGVPRVWEHHYMLDRDKDIAFEIGRFYYGIREYERALGFYSLSSTSIGEHHVTCHNMGLCHYSLGRLQQALEHFERSLALNASYEKAWSWQQKVLQEL 678
            RC LEDFT  +  HLWKLMMSFYDR+GVESW+QGIVPHFIT N FI + Y+ V   Y RD  K         S +DPS+P YI+ELGAGSGKFSF+ LKAL +M  +LDFP   I Y+MTDFT+ +FNFW+THP L  ++ +G +D AIFDA  D+ +RL  +G V+ P  + NP+CLIANYLFDTL HD+FQVDGG+LKEGL+SVGSK+A+EPDPLDPEIIKR +N+F+Y  +   YY  T     RP                             H   IL WY +YF  +STG + L PIGAL A+ RL A S +  + +SGDKG+N  + FRG+ DPHIAVHGSFSVMVNYHAIG+YF SRGGFALH+PQE+ASLKVSAFVL      P + + +S  EAHS   T             G   +   EKR R FP L  AF+  +  FGPNDFFV+QKS KED+  P+LKA++AL+KL  WDPDVFYKFR+ +L+Q P A  KL+ D+  G+P VW+++Y LD++KD+AFEIGR YYG+ EY+ AL +Y+LS+  +G+HHVT HNMGLCHYS  +L+ A   FE +  LN SY+KA +W Q+V +EL
Sbjct:   75 RCQLEDFTPFARCHLWKLMMSFYDRQGVESWAQGIVPHFITSNTFIAKRYSNVLSAYFRDALKTGS-----MSPVDPSQPFYIVELGAGSGKFSFYFLKALAQMESVLDFPLSNIRYIMTDFTEQNFNFWKTHPALAPFVKRGIVDFAIFDATTDTELRLYSSGQVIRPNDLINPLCLIANYLFDTLYHDLFQVDGGILKEGLVSVGSKRAEEPDPLDPEIIKRLNNIFKYDQIDEAYYGET-----RP-----------------------------HCNNILKWYHEYFDPASTGATILVPIGALSAIERLAALSKNGLVALSGDKGNNNPDHFRGVSDPHIAVHGSFSVMVNYHAIGVYFASRGGFALHSPQEEASLKVSAFVL------PANAARES--EAHSSAMT----------GLYGDGLDKTSEKRSRQFPHLTTAFNDEIVSFGPNDFFVMQKSTKEDAKTPSLKAVLALMKLSGWDPDVFYKFRDVLLDQSPAAAPKLKQDVVYGIPMVWKNYYALDKEKDVAFEIGRLYYGLHEYDSALAYYTLSAQEMGKHHVTSHNMGLCHYSKKQLELAATCFEEAYTLNRSYQKAATWLQRVRKEL 629
[Close]
BLAST of EWM28130.1 vs. NCBI_GenBank
Match: gi|568055001|gb|ETM51765.1| (hypothetical protein L914_04484 [Phytophthora parasitica])

HSP 1 Score: 682.174 bits (1759), Expect = 0.000e+0
Identity = 332/612 (54.25%), Postives = 417/612 (68.14%), Query Frame = 0 
Query:   67 RCVLEDFTRCSESHLWKLMMSFYDRKGVESWSQGIVPHFITCNAFIGRAYAQVFQGYLRDCAKKARENGPVCSALDPSEPLYIIELGAGSGKFSFFMLKALEEMRELLDFPFEKIVYVMTDFTKNHFNFWETHPGLHKYIAQGSLDLAIFDAVHDSVIRLSHAGTVLAPGSVKNPMCLIANYLFDTLCHDVFQVDGGVLKEGLISVGSKQAQEPDPLDPEIIKRFHNLFQYQPVTPDYYAHTHQPAHRPGHAPMGSPPSSSEPLSAGTNGSSDREDSLHLGRILHWYRDYFGRSSTGGSFLFPIGALRALRRLLAFSNDRGLVISGDKGSNQAEQFRGLVDPHIAVHGSFSVMVNYHAIGLYFISRGGFALHNPQEDASLKVSAFVLSGRAGPPESPSEDSPPEAHSPVTTTTSCLDTSPSSWAGPNAESEGEKRVRAFPCLRAAFSTAVDQFGPNDFFVLQKSMKEDSPNPTLKAIVALLKLGDWDPDVFYKFRETILNQVPTAGQKLRNDLCRGVPRVWEHHYMLDRDKDIAFEIGRFYYGIREYERALGFYSLSSTSIGEHHVTCHNMGLCHYSLGRLQQALEHFERSLALNASYEKAWSWQQKVLQEL 678
            RC LEDFT  +  HLWKLMMSFYDR+GVESW+QGIVPHFIT N FI + Y+ V   Y RD  K         S +DPS+P YI+ELGAGSGKFSF+ LKAL +M  +LDFP   I Y+MTDFT+ +FNFW+THP L  ++ +G +D AIFDA  D+ +RL  +G V+ P  + NP+CLIANYLFDTL HD+FQVDGG+LKEGL+SVGSK+A+EPDPLDPEIIKR +N+F+Y  +   YY  T     RP                             H   IL WY +YF  +STG + L PIGAL A+ RL A S +  + +SGDKG+N  + FRG+ DPHIAVHGSFSVMVNYHAIG+YF SRGGFALH+PQE+ASLKVSAFVL      P + + +S  EAHS   T             G   +   EKR R FP L  AF+  +  FGPNDFFV+QKS KED+  P+LKA++AL+KL  WDPDVFYKFR+ +L+Q P A  KL+ D+  G+P VW+++Y LD++KD+AFEIGR YYG+ EY+ AL +Y+LS+  +G+HHVT HNMGLCHYS  +L+ A   FE +  LN SY+KA +W Q+V +EL
Sbjct:   75 RCQLEDFTPFARCHLWKLMMSFYDRQGVESWAQGIVPHFITSNTFIAKRYSNVLSAYFRDALKTGS-----MSPVDPSQPFYIVELGAGSGKFSFYFLKALAQMESVLDFPLSNIRYIMTDFTEQNFNFWKTHPALAPFVKRGIVDFAIFDATTDTELRLYSSGQVIRPNDLINPLCLIANYLFDTLYHDLFQVDGGILKEGLVSVGSKRAEEPDPLDPEIIKRLNNIFKYDQIDEAYYGET-----RP-----------------------------HCNNILKWYHEYFDPASTGATILVPIGALSAIERLAALSKNGLVALSGDKGNNNPDHFRGVSDPHIAVHGSFSVMVNYHAIGVYFASRGGFALHSPQEEASLKVSAFVL------PANAARES--EAHSSAMT----------GLYGDGLDKTSEKRSRQFPHLTTAFNDEIVSFGPNDFFVMQKSTKEDAKTPSLKAVLALMKLSGWDPDVFYKFRDVLLDQSPAAAPKLKQDVVYGIPMVWKNYYALDKEKDVAFEIGRLYYGLHEYDSALAYYTLSAQEMGKHHVTSHNMGLCHYSKKQLELAATCFEEAYTLNRSYQKAATWLQRVRKEL 629
[Close]
BLAST of EWM28130.1 vs. NCBI_GenBank
Match: gi|566029238|gb|ETI52149.1| (hypothetical protein F443_04665 [Phytophthora parasitica P1569])

HSP 1 Score: 682.174 bits (1759), Expect = 0.000e+0
Identity = 332/612 (54.25%), Postives = 417/612 (68.14%), Query Frame = 0 
Query:   67 RCVLEDFTRCSESHLWKLMMSFYDRKGVESWSQGIVPHFITCNAFIGRAYAQVFQGYLRDCAKKARENGPVCSALDPSEPLYIIELGAGSGKFSFFMLKALEEMRELLDFPFEKIVYVMTDFTKNHFNFWETHPGLHKYIAQGSLDLAIFDAVHDSVIRLSHAGTVLAPGSVKNPMCLIANYLFDTLCHDVFQVDGGVLKEGLISVGSKQAQEPDPLDPEIIKRFHNLFQYQPVTPDYYAHTHQPAHRPGHAPMGSPPSSSEPLSAGTNGSSDREDSLHLGRILHWYRDYFGRSSTGGSFLFPIGALRALRRLLAFSNDRGLVISGDKGSNQAEQFRGLVDPHIAVHGSFSVMVNYHAIGLYFISRGGFALHNPQEDASLKVSAFVLSGRAGPPESPSEDSPPEAHSPVTTTTSCLDTSPSSWAGPNAESEGEKRVRAFPCLRAAFSTAVDQFGPNDFFVLQKSMKEDSPNPTLKAIVALLKLGDWDPDVFYKFRETILNQVPTAGQKLRNDLCRGVPRVWEHHYMLDRDKDIAFEIGRFYYGIREYERALGFYSLSSTSIGEHHVTCHNMGLCHYSLGRLQQALEHFERSLALNASYEKAWSWQQKVLQEL 678
            RC LEDFT  +  HLWKLMMSFYDR+GVESW+QGIVPHFIT N FI + Y+ V   Y RD  K         S +DPS+P YI+ELGAGSGKFSF+ LKAL +M  +LDFP   I Y+MTDFT+ +FNFW+THP L  ++ +G +D AIFDA  D+ +RL  +G V+ P  + NP+CLIANYLFDTL HD+FQVDGG+LKEGL+SVGSK+A+EPDPLDPEIIKR +N+F+Y  +   YY  T     RP                             H   IL WY +YF  +STG + L PIGAL A+ RL A S +  + +SGDKG+N  + FRG+ DPHIAVHGSFSVMVNYHAIG+YF SRGGFALH+PQE+ASLKVSAFVL      P + + +S  EAHS   T             G   +   EKR R FP L  AF+  +  FGPNDFFV+QKS KED+  P+LKA++AL+KL  WDPDVFYKFR+ +L+Q P A  KL+ D+  G+P VW+++Y LD++KD+AFEIGR YYG+ EY+ AL +Y+LS+  +G+HHVT HNMGLCHYS  +L+ A   FE +  LN SY+KA +W Q+V +EL
Sbjct:   75 RCQLEDFTPFARCHLWKLMMSFYDRQGVESWAQGIVPHFITSNTFIAKRYSNVLSAYFRDALKTGS-----MSPVDPSQPFYIVELGAGSGKFSFYFLKALAQMESVLDFPLSNIRYIMTDFTEQNFNFWKTHPALAPFVKRGIVDFAIFDATTDTELRLYSSGQVIRPNDLINPLCLIANYLFDTLYHDLFQVDGGILKEGLVSVGSKRAEEPDPLDPEIIKRLNNIFKYDQIDEAYYGET-----RP-----------------------------HCNNILKWYHEYFDPASTGATILVPIGALSAIERLAALSKNGLVALSGDKGNNNPDHFRGVSDPHIAVHGSFSVMVNYHAIGVYFASRGGFALHSPQEEASLKVSAFVL------PANAARES--EAHSSAMT----------GLYGDGLDKTSEKRSRQFPHLTTAFNDEIVSFGPNDFFVMQKSTKEDAKTPSLKAVLALMKLSGWDPDVFYKFRDVLLDQSPAAAPKLKQDVVYGIPMVWKNYYALDKEKDVAFEIGRLYYGLHEYDSALAYYTLSAQEMGKHHVTSHNMGLCHYSKKQLELAATCFEEAYTLNRSYQKAATWLQRVRKEL 629
[Close]
BLAST of EWM28130.1 vs. NCBI_GenBank
Match: gi|675186167|ref|XP_008901968.1| (hypothetical protein PPTG_08964 [Phytophthora parasitica INRA-310] >gi|568098229|gb|ETN12964.1| hypothetical protein PPTG_08964 [Phytophthora parasitica INRA-310])

HSP 1 Score: 679.478 bits (1752), Expect = 0.000e+0
Identity = 331/612 (54.08%), Postives = 416/612 (67.97%), Query Frame = 0 
Query:   67 RCVLEDFTRCSESHLWKLMMSFYDRKGVESWSQGIVPHFITCNAFIGRAYAQVFQGYLRDCAKKARENGPVCSALDPSEPLYIIELGAGSGKFSFFMLKALEEMRELLDFPFEKIVYVMTDFTKNHFNFWETHPGLHKYIAQGSLDLAIFDAVHDSVIRLSHAGTVLAPGSVKNPMCLIANYLFDTLCHDVFQVDGGVLKEGLISVGSKQAQEPDPLDPEIIKRFHNLFQYQPVTPDYYAHTHQPAHRPGHAPMGSPPSSSEPLSAGTNGSSDREDSLHLGRILHWYRDYFGRSSTGGSFLFPIGALRALRRLLAFSNDRGLVISGDKGSNQAEQFRGLVDPHIAVHGSFSVMVNYHAIGLYFISRGGFALHNPQEDASLKVSAFVLSGRAGPPESPSEDSPPEAHSPVTTTTSCLDTSPSSWAGPNAESEGEKRVRAFPCLRAAFSTAVDQFGPNDFFVLQKSMKEDSPNPTLKAIVALLKLGDWDPDVFYKFRETILNQVPTAGQKLRNDLCRGVPRVWEHHYMLDRDKDIAFEIGRFYYGIREYERALGFYSLSSTSIGEHHVTCHNMGLCHYSLGRLQQALEHFERSLALNASYEKAWSWQQKVLQEL 678
            RC LEDFT  +  HLWKLMMSFYDR+GVESW+QGIVPHFIT N FI + Y+ V   Y RD  K         S +DPS+P YI+ELGAGSGKFSF+ LKAL +M  +LDFP   I Y+MTDFT+ +FNFW+THP L  ++ +G +D AIFDA  D+ +RL  +G V+ P  + NP+CLIANYLFDTL HD+FQVD G+LKEGL+SVGSK+A+EPDPLDPEIIKR +N+F+Y  +   YY  T     RP                             H   IL WY +YF  +STG + L PIGAL A+ RL A S +  + +SGDKG+N  + FRG+ DPHIAVHGSFSVMVNYHAIG+YF SRGGFALH+PQE+ASLKVSAFVL      P + + +S  EAHS   T             G   +   EKR R FP L  AF+  +  FGPNDFFV+QKS KED+  P+LKA++AL+KL  WDPDVFYKFR+ +L+Q P A  KL+ D+  G+P VW+++Y LD++KD+AFEIGR YYG+ EY+ AL +Y+LS+  +G+HHVT HNMGLCHYS  +L+ A   FE +  LN SY+KA +W Q+V +EL
Sbjct:   75 RCQLEDFTPFARCHLWKLMMSFYDRQGVESWAQGIVPHFITSNTFIAKRYSNVLSAYFRDALKTGS-----MSPVDPSQPFYIVELGAGSGKFSFYFLKALAQMESVLDFPLSNIRYIMTDFTEQNFNFWKTHPALAPFVKRGIVDFAIFDATTDTELRLYSSGQVIRPNDLINPLCLIANYLFDTLYHDLFQVDRGILKEGLVSVGSKRAEEPDPLDPEIIKRLNNIFKYDQIDEAYYGET-----RP-----------------------------HCNNILKWYHEYFDPASTGATILVPIGALSAIERLAALSKNGLVALSGDKGNNNPDHFRGVSDPHIAVHGSFSVMVNYHAIGVYFASRGGFALHSPQEEASLKVSAFVL------PANAARES--EAHSSAMT----------GLYGDGLDKTSEKRSRQFPHLTTAFNDEIVSFGPNDFFVMQKSTKEDAKTPSLKAVLALMKLSGWDPDVFYKFRDVLLDQSPAAAPKLKQDVVYGIPMVWKNYYALDKEKDVAFEIGRLYYGLHEYDSALAYYTLSAQEMGKHHVTSHNMGLCHYSKKQLELAATCFEEAYTLNRSYQKAATWLQRVRKEL 629
[Close]
BLAST of EWM28130.1 vs. NCBI_GenBank
Match: gi|301092199|ref|XP_002996959.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262112221|gb|EEY70273.1| conserved hypothetical protein [Phytophthora infestans T30-4])

HSP 1 Score: 672.544 bits (1734), Expect = 0.000e+0
Identity = 336/656 (51.22%), Postives = 428/656 (65.24%), Query Frame = 0 
Query:   24 PENVTGGESILPPTSCPHVLPPHGSFPSSGQASSHSSSTTLPHRCVLEDFTRCSESHLWKLMMSFYDRKGVESWSQGIVPHFITCNAFIGRAYAQVFQGYLRDCAKKARENGPVCSALDPSEPLYIIELGAGSGKFSFFMLKALEEMRELLDFPFEKIVYVMTDFTKNHFNFWETHPGLHKYIAQGSLDLAIFDAVHDSVIRLSHAGTVLAPGSVKNPMCLIANYLFDTLCHDVFQVDGGVLKEGLISVGSKQAQEPDPLDPEIIKRFHNLFQYQPVTPDYYAHTHQPAHRPGHAPMGSPPSSSEPLSAGTNGSSDREDSLHLGRILHWYRDYFGRSSTGGSFLFPIGALRALRRLLAFSNDRGLVISGDKGSNQAEQFRGLVDPHIAVHGSFSVMVNYHAIGLYFISRGGFALHNPQEDASLKVSAFVLSGRAGPPESPSEDSPPEAHSPVTTTTSCLDTSPSSWAGPNAESEGEKRVRAFPCLRAAFSTAVDQFGPNDFFVLQKSMKEDSPNPTLKAIVALLKLGDWDPDVFYKFRETILNQVPTAGQKLRNDLCRGVPRVWEHHYMLDRDKDIAFEIGRFYYGIREYERALGFYSLSSTSIGEHHVTCHNMGLCHYSLGRLQQALEHFERSLALNASYEKAWSWQQKVLQELN 679
            P  VT   S    TS P    P  S P + +       TT   RC LEDFT  +  HLWKLMMSFYDR+GVESW+QGIVPHFIT N FI + Y+ V   Y RD  K         S +DPS+P YI+ELGAGSGKFSF+ LKAL +M  +LDFP   I YVMTDFT+ +FNFW+THP L  ++ +G +D AIFDA  D+ +RL  +G V+ P  + NP+CLIANYLFDTL HD+FQVDGGVLKEGL+SVGSK+A+E DPLDPEIIKR +N+F+Y+ +   YY  +     RP                             H   IL WY +YF  +S+G + L PIGAL A+ RL A S +  + +SGDKG+N  + FRG+ DPHIAVHGSFSVMVNYHAIG+YF SRGGFALH+PQE+ASLKVSAFVL   A                     +  L ++ +   G   +   EKR   FP L+ AF   +  FGPNDFFV+QK  KED+  P+LKA++AL+KL  WDPDVFYKFR+ +L+Q PTA  KL+ D+  G+P VW+++Y LD++KD+AFEIGR +YG+ EY+ AL +Y+LS+  +G+HHVT HNMGLCHYS  +L+ A   FE + +LN SY+KA +W Q+V +EL+
Sbjct:   37 PTPVTSDSSDGETTSTPS---PAPSAPKADEVRELEMQTT--PRCQLEDFTPFARCHLWKLMMSFYDRQGVESWAQGIVPHFITSNTFIAKRYSNVLSAYFRDALKPES-----MSPVDPSQPFYIVELGAGSGKFSFYFLKALAQMESVLDFPLSNIRYVMTDFTEQNFNFWKTHPALAPFVKRGIVDFAIFDATTDTELRLYSSGQVIRPNDLSNPLCLIANYLFDTLYHDLFQVDGGVLKEGLVSVGSKRAEESDPLDPEIIKRLNNIFKYEQIDEAYYGES-----RP-----------------------------HCNYILRWYHEYFDPASSGATVLVPIGALSAIERLAALSKNGLVALSGDKGNNNPDHFRGVSDPHIAVHGSFSVMVNYHAIGVYFASRGGFALHSPQEEASLKVSAFVLPANAA------------------GESEALSSTMAGLYGDGLDEACEKRSLKFPYLKTAFKDEIVSFGPNDFFVMQKFTKEDAKAPSLKAVLALMKLSGWDPDVFYKFRDVLLDQSPTAAPKLKQDVVYGIPMVWKNYYALDKEKDVAFEIGRLFYGLHEYDSALAYYTLSAQEMGKHHVTSHNMGLCHYSKKQLELAATCFEEAYSLNHSYQKAATWLQRVRKELD 630
The following BLAST results are available for this feature:
BLAST of EWM28130.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585110474|gb|EWM28130.1|0.000e+0100.00tetratricopeptide repeat family protein [Nannochlo... [more]
gi|298708220|emb|CBJ30559.1|0.000e+062.54conserved unknown protein [Ectocarpus siliculosus][more]
gi|676396745|ref|XP_009041650.1|0.000e+057.72hypothetical protein AURANDRAFT_39295 [Aureococcus... [more]
gi|676397421|ref|XP_009041988.1|0.000e+056.33hypothetical protein AURANDRAFT_55597 [Aureococcus... [more]
gi|567966845|gb|ETK92037.1|0.000e+054.25hypothetical protein L915_04550 [Phytophthora para... [more]
gi|570332975|gb|ETO80923.1|0.000e+054.25hypothetical protein F444_04696 [Phytophthora para... [more]
gi|568055001|gb|ETM51765.1|0.000e+054.25hypothetical protein L914_04484 [Phytophthora para... [more]
gi|566029238|gb|ETI52149.1|0.000e+054.25hypothetical protein F443_04665 [Phytophthora para... [more]
gi|675186167|ref|XP_008901968.1|0.000e+054.08hypothetical protein PPTG_08964 [Phytophthora para... [more]
gi|301092199|ref|XP_002996959.1|0.000e+051.22conserved hypothetical protein [Phytophthora infes... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2573rna2573Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications