EWM28128.1, cds2564 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28128.1 vs. NCBI_GenBank
Match: gi|585110472|gb|EWM28128.1| (atp phosphoribosyltransferase [Nannochloropsis gaditana]) HSP 1 Score: 617.461 bits (1591), Expect = 0.000e+0 Identity = 303/303 (100.00%), Postives = 303/303 (100.00%), Query Frame = 0
Query: 1 MSLTSNAGTLKPANILIGVPKKGRLNEKVSKLLDGAGLEYRRPDRVDVAVCTGLPVTLVFLPAADIAAYVGEGNVDMGITGQDILQETLSESPDAHITELLELGFGKCSLSLQAPVKDKISNAKELSGCRIVTSFPALTRAFFDKLDAETGRHTKVRTVSGSVEAACGLGLADAVVDLVETGTTMRAAGLDVVAEVMVSQAVLIANPNSSHQDLIALILKRIEGYITATQYMMISYNVRRESLGNTLAITPGKRSPTVSTLEEDGWVAVQALVRRKESNVKMDQLHDAGATDILLFPISNSRM 303
MSLTSNAGTLKPANILIGVPKKGRLNEKVSKLLDGAGLEYRRPDRVDVAVCTGLPVTLVFLPAADIAAYVGEGNVDMGITGQDILQETLSESPDAHITELLELGFGKCSLSLQAPVKDKISNAKELSGCRIVTSFPALTRAFFDKLDAETGRHTKVRTVSGSVEAACGLGLADAVVDLVETGTTMRAAGLDVVAEVMVSQAVLIANPNSSHQDLIALILKRIEGYITATQYMMISYNVRRESLGNTLAITPGKRSPTVSTLEEDGWVAVQALVRRKESNVKMDQLHDAGATDILLFPISNSRM
Sbjct: 1 MSLTSNAGTLKPANILIGVPKKGRLNEKVSKLLDGAGLEYRRPDRVDVAVCTGLPVTLVFLPAADIAAYVGEGNVDMGITGQDILQETLSESPDAHITELLELGFGKCSLSLQAPVKDKISNAKELSGCRIVTSFPALTRAFFDKLDAETGRHTKVRTVSGSVEAACGLGLADAVVDLVETGTTMRAAGLDVVAEVMVSQAVLIANPNSSHQDLIALILKRIEGYITATQYMMISYNVRRESLGNTLAITPGKRSPTVSTLEEDGWVAVQALVRRKESNVKMDQLHDAGATDILLFPISNSRM 303
BLAST of EWM28128.1 vs. NCBI_GenBank
Match: gi|551670869|ref|XP_005838192.1| (hypothetical protein GUITHDRAFT_159337 [Guillardia theta CCMP2712] >gi|428182351|gb|EKX51212.1| hypothetical protein GUITHDRAFT_159337 [Guillardia theta CCMP2712]) HSP 1 Score: 361.688 bits (927), Expect = 1.491e-122 Identity = 178/296 (60.14%), Postives = 227/296 (76.69%), Query Frame = 0
Query: 9 TLKPANILIGVPKKGRLNEKVSKLL-DGAGLEYRRPDRVDVAVCTGLPVTLVFLPAADIAAYVGEGNVDMGITGQDILQETLSESPDAHITELLELGFGKCSLSLQAPVKDKISNAKELSGCRIVTSFPALTRAFFDKLDAETGRHTKVRTVSGSVEAACGLGLADAVVDLVETGTTMRAAGLDVVAEVMVSQAVLIANPNSSHQDLIALILKRIEGYITATQYMMISYNVRRESLGNTLAITPGKRSPTVSTLEEDGWVAVQALVRRKESNVKMDQLHDAGATDILLFPISNSRM 303
++ P N+L+GVPKKGRL+E+ KLL GAGLE++RP+R+D+A CT LPVTLVFLPA DIA YV EGNVDMGITG D+++ET ++ D I + +LGFG+C L++QAP + + +A L+G R+VTSFPA+ +F K + ++ TK++ VSGSVEAACGLGLADAVVDLVETGTTMRAAGL++V +M ++AVLI N N+ + L+ I KRIEGY TAT+Y MI YNV+RE+L LAITPGKRSPTVS LEE GW AV ALV +K++ MD+L GA IL+F ISNSRM
Sbjct: 3 SIPPENLLMGVPKKGRLHEQCMKLLVQGAGLEHKRPERLDIAHCTDLPVTLVFLPAHDIATYVAEGNVDMGITGMDVIEETEPQNKDLSI--VAKLGFGQCKLAVQAPAAEGLKDASVLAGKRVVTSFPAIAEKYFSKYENDSTGKTKIKFVSGSVEAACGLGLADAVVDLVETGTTMRAAGLEIVETIMETEAVLIKNVNTPYPALVETIKKRIEGYQTATKYQMIQYNVQRENLEKALAITPGKRSPTVSALEESGWCAVSALVHKKDAAKIMDELERVGADSILIFSISNSRM 296
BLAST of EWM28128.1 vs. NCBI_GenBank
Match: gi|299471537|emb|CBN80023.1| (ATP phosphoribosyltransferase [Ectocarpus siliculosus]) HSP 1 Score: 359.762 bits (922), Expect = 1.081e-121 Identity = 177/302 (58.61%), Postives = 231/302 (76.49%), Query Frame = 0
Query: 2 SLTSNAGTLKPANILIGVPKKGRLNEKVSKLLDGAGLEYRRPDRVDVAVCTGLPVTLVFLPAADIAAYVGEGNVDMGITGQDILQETLSESPDAHITELLELGFGKCSLSLQAPVKDKISNAKELSGCRIVTSFPALTRAFFDKLDAETGRHTKVRTVSGSVEAACGLGLADAVVDLVETGTTMRAAGLDVVAEVMVSQAVLIANPNSSHQDLIALILKRIEGYITATQYMMISYNVRRESLGNTLAITPGKRSPTVSTLEEDGWVAVQALVRRKESNVKMDQLHDAGATDILLFPISNSRM 303
++T N + N+++ VPKKGRL ++ KLL GAG+++RRP RVD+A C+ LPVTLVFLPA DIA +VGEGNVD+GITG D+++ET S D+ I +ELGFGKC L +QAPV I++ K LSG RIVTSFPA+ +AFFD+ D TK++ VSGSVEAACGLGLADAVVDLVETGTTM+AAGL+VVAEVM SQ +LI + H++++ LI++RIEGYITA +Y+M+SYN +E+L + PGKRSPTVS L+ +GW AVQAL+ +K+S+ MD+L GATDILLF + N+R+
Sbjct: 3 TVTGNNSMIPADNVVMAVPKKGRLYDRCMKLLAGAGMDHRRPARVDIAQCSDLPVTLVFLPAHDIAMFVGEGNVDIGITGLDVVKET---SDDSEIEVAMELGFGKCRLCVQAPVSAGITDVKTLSGKRIVTSFPAVCKAFFDQYDTPD-NPTKIKYVSGSVEAACGLGLADAVVDLVETGTTMKAAGLEVVAEVMDSQCLLIVGKGTKHREMVDLIVRRIEGYITAEKYLMVSYNTSKENLEACKQVAPGKRSPTVSQLDTEGWFAVQALILKKDSSRVMDELQGCGATDILLFAMHNTRI 300
BLAST of EWM28128.1 vs. NCBI_GenBank
Match: gi|1210521300|dbj|GAX20048.1| (ATP phosphoribosyltransferase [Fistulifera solaris]) HSP 1 Score: 358.221 bits (918), Expect = 1.187e-120 Identity = 170/292 (58.22%), Postives = 224/292 (76.71%), Query Frame = 0
Query: 12 PANILIGVPKKGRLNEKVSKLLDGAGLEYRRPDRVDVAVCTGLPVTLVFLPAADIAAYVGEGNVDMGITGQDILQETLSESPDAHITELLELGFGKCSLSLQAPVKDKISNAKELSGCRIVTSFPALTRAFFDKLDAETGRHTKVRTVSGSVEAACGLGLADAVVDLVETGTTMRAAGLDVVAEVMVSQAVLIANPNSSHQDLIALILKRIEGYITATQYMMISYNVRRESLGNTLAITPGKRSPTVSTLEEDGWVAVQALVRRKESNVKMDQLHDAGATDILLFPISNSRM 303
P N VPKKGRLNEKV ++L GAG+E+ R R+DVA+C LP+T+VFLPA+DIA YVGEGN+D+GITG D+++E++ E + ++++LGFGKC L +QAPV D+I N ++L+G RIVTSFPALT+ FF LDA+ G TK+ VSGSVEAACGLGLADAVVDLVETGTTM+AAGL+VV++++ +QA+LIANP + HQD++ LI +R+EG+ITA + + YN+ L AITPGKRSPT++ L++ +V ALV + N MDQLHD GATDIL+ +SNSRM
Sbjct: 43 PGNCRFAVPKKGRLNEKVMEMLSGAGIEFHREPRLDVALCKNLPITIVFLPASDIAKYVGEGNIDLGITGYDVVEESMVE-----VNKIMDLGFGKCKLCVQAPVVDEIKNVEDLAGKRIVTSFPALTKKFFGPLDAKKGVETKINFVSGSVEAACGLGLADAVVDLVETGTTMKAAGLEVVSDILSTQAILIANPKAQHQDIVDLIQRRLEGFITARNSVFVVYNISNHLLAKATAITPGKRSPTITALDDGESKSVSALVPKANVNDIMDQLHDVGATDILVMNLSNSRM 329
BLAST of EWM28128.1 vs. NCBI_GenBank
Match: gi|1072230769|gb|OEU15502.1| (HisG-domain-containing protein [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 355.91 bits (912), Expect = 3.153e-120 Identity = 169/292 (57.88%), Postives = 225/292 (77.05%), Query Frame = 0
Query: 12 PANILIGVPKKGRLNEKVSKLLDGAGLEYRRPDRVDVAVCTGLPVTLVFLPAADIAAYVGEGNVDMGITGQDILQETLSESPDAHITELLELGFGKCSLSLQAPVKDKISNAKELSGCRIVTSFPALTRAFFDKLDAETGRHTKVRTVSGSVEAACGLGLADAVVDLVETGTTMRAAGLDVVAEVMVSQAVLIANPNSSHQDLIALILKRIEGYITATQYMMISYNVRRESLGNTLAITPGKRSPTVSTLEEDGWVAVQALVRRKESNVKMDQLHDAGATDILLFPISNSRM 303
P N+ +PKKGRL EKV ++L G+G+E+RR R+DVA+C GLP+TL+FLPAADIA +VGEGNVD+GITG+DI++E + E + ++ELGFGKC L +QAPV D I++ + L+G RIVTSFP +T+ FF D + G T + VSGSVEAACGLGLADAVVDLVETGTTMRAAGL+VV +++ +QAVLI+NP+S H+DL+A + +RIEGYIT+ +Y+M+ YN+ E + +TPGK+SPTV++LE AV AL+ +KE + KMD LHD GATDIL+ ++NSRM
Sbjct: 9 PENLKFAIPKKGRLMEKVVEMLKGSGIEFRRQPRLDVALCVGLPITLIFLPAADIAKFVGEGNVDLGITGEDIVKENMVE-----VDTIMELGFGKCKLCVQAPVTDNITDVESLAGKRIVTSFPDITKQFFQTYDEKLGVTTNINYVSGSVEAACGLGLADAVVDLVETGTTMRAAGLEVVHDILSTQAVLISNPHSEHKDLVAKLQRRIEGYITSRKYVMMMYNISNELFQAAILVTPGKKSPTVTSLEGGKDKAVSALILKKEVSDKMDALHDVGATDILVLELNNSRM 295
BLAST of EWM28128.1 vs. NCBI_GenBank
Match: gi|219111937|ref|XP_002177720.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217410605|gb|EEC50534.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 352.829 bits (904), Expect = 4.250e-119 Identity = 171/292 (58.56%), Postives = 222/292 (76.03%), Query Frame = 0
Query: 12 PANILIGVPKKGRLNEKVSKLLDGAGLEYRRPDRVDVAVCTGLPVTLVFLPAADIAAYVGEGNVDMGITGQDILQETLSESPDAHITELLELGFGKCSLSLQAPVKDKISNAKELSGCRIVTSFPALTRAFFDKLDAETGRHTKVRTVSGSVEAACGLGLADAVVDLVETGTTMRAAGLDVVAEVMVSQAVLIANPNSSHQDLIALILKRIEGYITATQYMMISYNVRRESLGNTLAITPGKRSPTVSTLEEDGWVAVQALVRRKESNVKMDQLHDAGATDILLFPISNSRM 303
P N +PKKGRL++K+ ++L G+G+E+RR R+DVA+C LP+TLVFLPA+DIA YVGEGN+D+GITG DI++E+ E + +++LGFGKC L +Q P D I++ L+G RIVTSFP LT+ FF D E G TKV+ VSGSVEAACGLGLAD +VDLVETGTTMRAAGL+VVA+++ +QA+LIAN ++ H D+I LI +R+EGYITAT+Y+M+ YNV E + +AITPGKRSPT++ L++ AV +LV KE N KMD LHD GATDIL+ ISNSRM
Sbjct: 9 PENCRFAIPKKGRLHDKILQMLKGSGIEFRREPRLDVALCVDLPITLVFLPASDIAKYVGEGNIDLGITGLDIVKESQVE-----VDHVMDLGFGKCKLCVQVPSDDNITDVSTLAGKRIVTSFPELTKQFFQPFDDELGVETKVKFVSGSVEAACGLGLADGIVDLVETGTTMRAAGLEVVADIISTQAMLIANTHTKHIDIIHLIKRRLEGYITATKYVMLVYNVSNELVERAVAITPGKRSPTITALDDGNSKAVSSLVLAKEVNQKMDALHDIGATDILVLDISNSRM 295
BLAST of EWM28128.1 vs. NCBI_GenBank
Match: gi|1210526948|dbj|GAX14275.1| (ATP phosphoribosyltransferase [Fistulifera solaris]) HSP 1 Score: 351.673 bits (901), Expect = 1.543e-118 Identity = 167/292 (57.19%), Postives = 222/292 (76.03%), Query Frame = 0
Query: 12 PANILIGVPKKGRLNEKVSKLLDGAGLEYRRPDRVDVAVCTGLPVTLVFLPAADIAAYVGEGNVDMGITGQDILQETLSESPDAHITELLELGFGKCSLSLQAPVKDKISNAKELSGCRIVTSFPALTRAFFDKLDAETGRHTKVRTVSGSVEAACGLGLADAVVDLVETGTTMRAAGLDVVAEVMVSQAVLIANPNSSHQDLIALILKRIEGYITATQYMMISYNVRRESLGNTLAITPGKRSPTVSTLEEDGWVAVQALVRRKESNVKMDQLHDAGATDILLFPISNSRM 303
P N VPKKGRLNEKV ++L GAG+E+ R R+DVA+C LP+T+VFLPA+DIA YVGEG++D+GITG D+++E++ E + ++++LGFGKC L +QAPV D+I N ++L+G RIVTSFPALT+ FF LD + G TK+ VSGSVEAACGLGLADAVVDLVETGTTM+AAGL+VV++++ +QA+LIANP + HQD++ LI +R+EG+ITA + + YN+ L AITPGKRSPT++ L++ +V ALV + N MDQLHD GATDIL+ +SN RM
Sbjct: 9 PGNCRFAVPKKGRLNEKVMEMLSGAGIEFHREPRLDVALCKNLPITIVFLPASDIAKYVGEGDIDLGITGYDVVEESMVE-----VNKIMDLGFGKCKLCVQAPVVDEIKNVEDLAGKRIVTSFPALTKKFFGPLDYKKGVETKINFVSGSVEAACGLGLADAVVDLVETGTTMKAAGLEVVSDILSTQAILIANPKAQHQDIVDLIQRRLEGFITARNSVFVVYNISNHLLAKATAITPGKRSPTITALDDGESKSVSALVPKANVNDIMDQLHDIGATDILVMNLSNCRM 295
BLAST of EWM28128.1 vs. NCBI_GenBank
Match: gi|695433286|ref|XP_009531143.1| (hypothetical protein PHYSODRAFT_511531 [Phytophthora sojae] >gi|348673895|gb|EGZ13714.1| hypothetical protein PHYSODRAFT_511531 [Phytophthora sojae]) HSP 1 Score: 347.436 bits (890), Expect = 7.762e-117 Identity = 167/288 (57.99%), Postives = 222/288 (77.08%), Query Frame = 0
Query: 15 ILIGVPKKGRLNEKVSKLLDGAGLEYRRPDRVDVAVCTGLPVTLVFLPAADIAAYVGEGNVDMGITGQDILQETLSESPDAHITELLELGFGKCSLSLQAPVKDKISNAKELSGCRIVTSFPALTRAFFDKLDAETGRHTKVRTVSGSVEAACGLGLADAVVDLVETGTTMRAAGLDVVAEVMVSQAVLIANPNSSHQDLIALILKRIEGYITATQYMMISYNVRRESLGNTLAITPGKRSPTVSTLEEDGWVAVQALVRRKESNVKMDQLHDAGATDILLFPISNSR 302
+L VPKKGRL++K+ KLL GAGL+Y RP+RVD+A+C+ LPVTLVFLPA+DIA YVGEGN+D+GITGQDI+ E+ + ++ ELL+LGFGKC+L +Q PVKD ++ + L+G RIVTSFP +TR +F + + E TK++ V GSVEAAC LGLAD +VDLVETGTTM+AAGL++++ ++ +QAVLIANP S+H+DL+ + +RI GYITAT+Y M++YNV +E L ITPG+RSPTV+TL G+ AV A+V K + MDQLH GATDI++F I N R
Sbjct: 17 LLFAVPKKGRLHDKILKLLKGAGLDYHRPNRVDIALCSSLPVTLVFLPASDIATYVGEGNLDLGITGQDIIAESRT-----NVEELLQLGFGKCALGVQTPVKDAVAAPELLAGKRIVTSFPEVTRDYFKQFETEATGPTKIKYVGGSVEAACSLGLADGIVDLVETGTTMKAAGLEMISTILTTQAVLIANPQSAHKDLVHKVHQRILGYITATKYRMVTYNVDQEKLDEATKITPGRRSPTVNTLVGGGY-AVSAMVEEKNVSEVMDQLHAIGATDIMIFNIENCR 298
BLAST of EWM28128.1 vs. NCBI_GenBank
Match: gi|301108253|ref|XP_002903208.1| (ATP phosphoribosyltransferase [Phytophthora infestans T30-4] >gi|301108351|ref|XP_002903257.1| ATP phosphoribosyltransferase [Phytophthora infestans T30-4] >gi|262097580|gb|EEY55632.1| ATP phosphoribosyltransferase [Phytophthora infestans T30-4] >gi|262097629|gb|EEY55681.1| ATP phosphoribosyltransferase [Phytophthora infestans T30-4]) HSP 1 Score: 347.051 bits (889), Expect = 9.980e-117 Identity = 168/288 (58.33%), Postives = 223/288 (77.43%), Query Frame = 0
Query: 15 ILIGVPKKGRLNEKVSKLLDGAGLEYRRPDRVDVAVCTGLPVTLVFLPAADIAAYVGEGNVDMGITGQDILQETLSESPDAHITELLELGFGKCSLSLQAPVKDKISNAKELSGCRIVTSFPALTRAFFDKLDAETGRHTKVRTVSGSVEAACGLGLADAVVDLVETGTTMRAAGLDVVAEVMVSQAVLIANPNSSHQDLIALILKRIEGYITATQYMMISYNVRRESLGNTLAITPGKRSPTVSTLEEDGWVAVQALVRRKESNVKMDQLHDAGATDILLFPISNSR 302
+L VPKKGRL++K+ KLL GAGL+Y RP+RVD+A+C+ LPVTLVFLPA+DIA YVGEGN+D+GITGQDI+ E+ ++ + ELL LGFG+CSL +Q PVKD I++ + L+G RIVTSFP TR +F + + E TK++ VSGSVEAAC LGLAD +VDLVETGTTM+AAGL++++ ++ +QAVLIANP S+H+DL+ + +RI G+ITAT+Y M++YNV +E L ITPG+RSPTV+ L G+ AV A+V K+ + MDQLHD GATDI++F I N R
Sbjct: 17 LLFAVPKKGRLHDKILKLLKGAGLDYHRPNRVDIALCSSLPVTLVFLPASDIATYVGEGNLDLGITGQDIIAESCTK-----VEELLPLGFGQCSLGVQTPVKDAITSPELLAGKRIVTSFPETTRDYFKQFETEATGPTKIKYVSGSVEAACSLGLADGIVDLVETGTTMKAAGLELISTILKTQAVLIANPQSAHKDLVHKVHQRILGFITATKYRMVTYNVDKEKLEEATKITPGRRSPTVNGLVGGGY-AVSAMVEVKDVSDVMDQLHDVGATDIMIFNIENCR 298
BLAST of EWM28128.1 vs. NCBI_GenBank
Match: gi|568017427|gb|ETL91604.1| (ATP phosphoribosyltransferase [Phytophthora parasitica] >gi|568047830|gb|ETM44898.1| ATP phosphoribosyltransferase [Phytophthora parasitica] >gi|570325802|gb|ETO73750.1| ATP phosphoribosyltransferase [Phytophthora parasitica P1976] >gi|570983074|gb|ETP42972.1| ATP phosphoribosyltransferase [Phytophthora parasitica P10297]) HSP 1 Score: 346.665 bits (888), Expect = 1.355e-116 Identity = 169/288 (58.68%), Postives = 223/288 (77.43%), Query Frame = 0
Query: 15 ILIGVPKKGRLNEKVSKLLDGAGLEYRRPDRVDVAVCTGLPVTLVFLPAADIAAYVGEGNVDMGITGQDILQETLSESPDAHITELLELGFGKCSLSLQAPVKDKISNAKELSGCRIVTSFPALTRAFFDKLDAETGRHTKVRTVSGSVEAACGLGLADAVVDLVETGTTMRAAGLDVVAEVMVSQAVLIANPNSSHQDLIALILKRIEGYITATQYMMISYNVRRESLGNTLAITPGKRSPTVSTLEEDGWVAVQALVRRKESNVKMDQLHDAGATDILLFPISNSR 302
+L VPKKGRL++K+ KLL GAGL+Y RP+RVD+A+C+ LPVTLVFLPA+DIA YVGEGN+D+GITGQDI+ E+ ++ + ELL LGFGKCSL +Q PVKD I++ + L+G RIVTSFP +TR +F + + E TK++ VSGSVEAAC LGLAD +VDLVETGTTM+AAGL++++ ++ +QAVLIANP S+ +DL+ + +RI GYITAT+Y M++YNV +E L ITPG+RSPTV+ L G+ AV A+V K+ + MDQLHD GATDI++F I N R
Sbjct: 17 LLFAVPKKGRLHDKILKLLKGAGLDYHRPNRVDIALCSSLPVTLVFLPASDIATYVGEGNLDLGITGQDIIAESRTK-----VDELLPLGFGKCSLGVQTPVKDAIASPELLAGKRIVTSFPEVTREYFKQFETEATGPTKIKYVSGSVEAACSLGLADGIVDLVETGTTMKAAGLELISTILKTQAVLIANPQSARKDLVHKVHQRILGYITATKYRMVTYNVDKEKLDAATKITPGRRSPTVNGLVGGGY-AVSAMVEVKDVSDVMDQLHDVGATDIMIFNIENCR 298 The following BLAST results are available for this feature:
BLAST of EWM28128.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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