EWM28131.1, cds2551 (CDS) Nannochloropsis gaditana

Overview
NameEWM28131.1
Unique Namecds2551
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002459.1:668258..668458 -
Alignment locationCM002459.1:666319..668124 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM28131.1
Productpuff-specific protein bx42
Orig transcript idgnl|cribi|Naga_100036g26.2551.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:668258..668458 -
CM002459.1supercontigCM002459.1:666319..668124 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0006950response to stress
GO:0006139nucleobase-containing compound metabolic process
GO:0042221response to chemical
GO:0009628response to abiotic stimulus
GO:0000398mRNA splicing, via spliceosome
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
GO:0005681spliceosomal complex
Vocabulary: INTERPRO
TermDefinition
IPR017862SKI-int_prot_SKIP
IPR004015SKI-int_prot_SKIP_SNW-dom
Homology
BLAST of EWM28131.1 vs. NCBI_GenBank
Match: gi|585110475|gb|EWM28131.1| (puff-specific protein bx42 [Nannochloropsis gaditana])

HSP 1 Score: 1347.41 bits (3486), Expect = 0.000e+0
Identity = 668/668 (100.00%), Postives = 668/668 (100.00%), Query Frame = 0
Query:    1 MLLTNYNHGHEYETGPRIQSCQCNRSSSSGHLGTMATLGLSRLLPKPTQTYQVHKDDPSPTALARLEISGKKVIPPYGERNGFVPRAVGDFGDGGAFPEVHVVQYPLNMGKKDAASASNAIVSVDVAADGKVNFDAIVRQGTNRNKIVHSKLSDMRGGDADENVLSKPTPEEEAEQAAKTKSALEALIGGKIAAARPVQLAKAPGSEEPTYVRYTPNPNAPGYNTNAKQRVIELVDAQVDPMEPAKHKHKKVPRGPPEDPVPVLHSPPRKVSVEDQEAWKIPPCISNWKNAKGYTIPLDKRLAADGRGLQETTINPKFAALPQALYIAEDKAREQIAARAKIDQKIKKLEREQKEQELRELAARSRMARAGVPGEVGGRREEESVGHYGRAGGGAGGVRERVEDVGEERGAEVVRGMTEEERVAAAQRDKLRVERRKELERDMRKDNMRGAMRKGKLDRDGERDISEKIALGMHVGSAKLTGDEVYDSRLFNQGGGVEAGFGGEDEYNVYNKALFDKGTGSSIYRPRGDVGVGGLDEDGGADAEAQYKKIANADKFRPDRGFAGADYHGGGQARDKPVQFEREGGREGGGRESGGSGRREDEEDFFGVGDFVEEGGGGKRKDPLGRIGGRGLMSAGTAGSKEELEMGSKRQKINFTEAGGGGRRERSP 668
            MLLTNYNHGHEYETGPRIQSCQCNRSSSSGHLGTMATLGLSRLLPKPTQTYQVHKDDPSPTALARLEISGKKVIPPYGERNGFVPRAVGDFGDGGAFPEVHVVQYPLNMGKKDAASASNAIVSVDVAADGKVNFDAIVRQGTNRNKIVHSKLSDMRGGDADENVLSKPTPEEEAEQAAKTKSALEALIGGKIAAARPVQLAKAPGSEEPTYVRYTPNPNAPGYNTNAKQRVIELVDAQVDPMEPAKHKHKKVPRGPPEDPVPVLHSPPRKVSVEDQEAWKIPPCISNWKNAKGYTIPLDKRLAADGRGLQETTINPKFAALPQALYIAEDKAREQIAARAKIDQKIKKLEREQKEQELRELAARSRMARAGVPGEVGGRREEESVGHYGRAGGGAGGVRERVEDVGEERGAEVVRGMTEEERVAAAQRDKLRVERRKELERDMRKDNMRGAMRKGKLDRDGERDISEKIALGMHVGSAKLTGDEVYDSRLFNQGGGVEAGFGGEDEYNVYNKALFDKGTGSSIYRPRGDVGVGGLDEDGGADAEAQYKKIANADKFRPDRGFAGADYHGGGQARDKPVQFEREGGREGGGRESGGSGRREDEEDFFGVGDFVEEGGGGKRKDPLGRIGGRGLMSAGTAGSKEELEMGSKRQKINFTEAGGGGRRERSP
Sbjct:    1 MLLTNYNHGHEYETGPRIQSCQCNRSSSSGHLGTMATLGLSRLLPKPTQTYQVHKDDPSPTALARLEISGKKVIPPYGERNGFVPRAVGDFGDGGAFPEVHVVQYPLNMGKKDAASASNAIVSVDVAADGKVNFDAIVRQGTNRNKIVHSKLSDMRGGDADENVLSKPTPEEEAEQAAKTKSALEALIGGKIAAARPVQLAKAPGSEEPTYVRYTPNPNAPGYNTNAKQRVIELVDAQVDPMEPAKHKHKKVPRGPPEDPVPVLHSPPRKVSVEDQEAWKIPPCISNWKNAKGYTIPLDKRLAADGRGLQETTINPKFAALPQALYIAEDKAREQIAARAKIDQKIKKLEREQKEQELRELAARSRMARAGVPGEVGGRREEESVGHYGRAGGGAGGVRERVEDVGEERGAEVVRGMTEEERVAAAQRDKLRVERRKELERDMRKDNMRGAMRKGKLDRDGERDISEKIALGMHVGSAKLTGDEVYDSRLFNQGGGVEAGFGGEDEYNVYNKALFDKGTGSSIYRPRGDVGVGGLDEDGGADAEAQYKKIANADKFRPDRGFAGADYHGGGQARDKPVQFEREGGREGGGRESGGSGRREDEEDFFGVGDFVEEGGGGKRKDPLGRIGGRGLMSAGTAGSKEELEMGSKRQKINFTEAGGGGRRERSP 668          
BLAST of EWM28131.1 vs. NCBI_GenBank
Match: gi|553178664|ref|XP_005852589.1| (SNW domain-containing protein 1 [Nannochloropsis gaditana CCMP526] >gi|422295942|gb|EKU23241.1| SNW domain-containing protein 1 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 687.182 bits (1772), Expect = 0.000e+0
Identity = 335/335 (100.00%), Postives = 335/335 (100.00%), Query Frame = 0
Query:   35 MATLGLSRLLPKPTQTYQVHKDDPSPTALARLEISGKKVIPPYGERNGFVPRAVGDFGDGGAFPEVHVVQYPLNMGKKDAASASNAIVSVDVAADGKVNFDAIVRQGTNRNKIVHSKLSDMRGGDADENVLSKPTPEEEAEQAAKTKSALEALIGGKIAAARPVQLAKAPGSEEPTYVRYTPNPNAPGYNTNAKQRVIELVDAQVDPMEPAKHKHKKVPRGPPEDPVPVLHSPPRKVSVEDQEAWKIPPCISNWKNAKGYTIPLDKRLAADGRGLQETTINPKFAALPQALYIAEDKAREQIAARAKIDQKIKKLEREQKEQELRELAARSRMAR 369
            MATLGLSRLLPKPTQTYQVHKDDPSPTALARLEISGKKVIPPYGERNGFVPRAVGDFGDGGAFPEVHVVQYPLNMGKKDAASASNAIVSVDVAADGKVNFDAIVRQGTNRNKIVHSKLSDMRGGDADENVLSKPTPEEEAEQAAKTKSALEALIGGKIAAARPVQLAKAPGSEEPTYVRYTPNPNAPGYNTNAKQRVIELVDAQVDPMEPAKHKHKKVPRGPPEDPVPVLHSPPRKVSVEDQEAWKIPPCISNWKNAKGYTIPLDKRLAADGRGLQETTINPKFAALPQALYIAEDKAREQIAARAKIDQKIKKLEREQKEQELRELAARSRMAR
Sbjct:    1 MATLGLSRLLPKPTQTYQVHKDDPSPTALARLEISGKKVIPPYGERNGFVPRAVGDFGDGGAFPEVHVVQYPLNMGKKDAASASNAIVSVDVAADGKVNFDAIVRQGTNRNKIVHSKLSDMRGGDADENVLSKPTPEEEAEQAAKTKSALEALIGGKIAAARPVQLAKAPGSEEPTYVRYTPNPNAPGYNTNAKQRVIELVDAQVDPMEPAKHKHKKVPRGPPEDPVPVLHSPPRKVSVEDQEAWKIPPCISNWKNAKGYTIPLDKRLAADGRGLQETTINPKFAALPQALYIAEDKAREQIAARAKIDQKIKKLEREQKEQELRELAARSRMAR 335          
BLAST of EWM28131.1 vs. NCBI_GenBank
Match: gi|298710859|emb|CBJ26368.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 520.776 bits (1340), Expect = 3.010e-175
Identity = 291/603 (48.26%), Postives = 386/603 (64.01%), Query Frame = 0
Query:   43 LLPKPTQTYQVHKDDPSPTALARLEISGKKVIPPYGERNGFVPRAVGDFGDGGAFPEVHVVQYPLNMGKKDAA---------------------SASNAIVSVDVAADGKVNFDAIVRQGTNRNKIVHSKLSDMRGGDADENVLSKPTPEEEAEQAAKTKSALEALIGGKIAAARPVQLAKAPGSEEPTYVRYTPNPNAPGYNTNAKQRVIELVDAQVDPMEPAKHKHKKVPRGPPEDPVPVLHSPPRKVSVEDQEAWKIPPCISNWKNAKGYTIPLDKRLAADGRGLQETTINPKFAALPQALYIAEDKAREQIAARAKIDQKIKKLEREQKEQELRELAARSRMARAGVPGEVGGRREEESVGHYGR---AGGGAGGVRERVEDVGEERGAEVVRGMTEEERVAAAQRDKLRVERRKELERDMRKDNMRGAMRKGKLDRDGERDISEKIALGMHVGSAKLTGDEVYDSRLFNQGGGVEAGFGGEDEYNVYNKALFDKGTGSSIYRPRGDVGVGGLDEDGGADAEAQYKKIANADKFRPDRGFAGADYHGGGQARDKPVQFEREGGREGGGRESGGSGRREDEEDFFGVGDFVEEGGGGKRK 621
             LP P   Y+VH D+      + L  + K  +PPYG+R  FVPRA  DFGDGGAFPE+HV Q+PL MG+                         S S AIV+VDV  +GKV  DAIV+QGTNR+KIV+S+LS+++    D   L  PT +EEA  A +T+ A E LIG K+ +A P  +      +E  +++YTPNPNAPGYN NAKQRV+ +V AQVDPMEP KHKHKKVPR P +DPVPVLHSPPRKV+V+DQ+AWKIPPC+SNWKNA+GYTIPLDKRLAADGRGLQE T++P FA L ++LYIAE KARE+   R ++ +++   E++QKE +LR+LA+R+R+ RAG+    GG ++++S    G    +G G           G   G      M +EERVAA QR++LR ER+K+ ERD+R DNMRG M+K KLD++ +RDISEKIALGMH G     G ++YD+RLFNQ  G+++GFG ED Y VY+K +F++G   S+Y+P+ D G          DA+ Q  ++   ++FR DRGF G +  G   AR+ PVQFE +                  E D FG+  F+++    K+K
Sbjct:    5 FLPAPRHKYEVHADE---GLSSLLPPAPKHKVPPYGQRQSFVPRAQADFGDGGAFPEIHVAQFPLEMGRPATKKAGAAAGGGGGVGGTSGLGDNSGSTAIVAVDVDENGKVKHDAIVKQGTNRDKIVYSQLSNIKEKRGDVEKLQAPTADEEALTAERTRQAFEKLIGAKVTSATPGSIGDQ-TRKEAEFIKYTPNPNAPGYNNNAKQRVVRMVAAQVDPMEPPKHKHKKVPRAPADDPVPVLHSPPRKVTVQDQQAWKIPPCVSNWKNARGYTIPLDKRLAADGRGLQENTVSPNFATLSESLYIAERKAREETRLRGEMLKQVAMREKDQKEADLRDLASRARLERAGI--ARGGAQDDDSDDDEGAPRPSGAGDARYGGGGGRGGGGGGGGGGGAMGDEERVAAEQRERLRAERKKDRERDLRIDNMRGGMKKQKLDKEKDRDISEKIALGMHKGGGGKGGADLYDARLFNQSAGMDSGFGAEDGYGVYSKPMFNRGEAQSVYKPKTDDGD------AWGDADQQMSQLTGTERFRADRGFKGTE-SGATGARNAPVQFEADPA----------------EADPFGLDAFLKDAKSSKKK 578          
BLAST of EWM28131.1 vs. NCBI_GenBank
Match: gi|676382055|ref|XP_009034306.1| (hypothetical protein AURANDRAFT_52680 [Aureococcus anophagefferens] >gi|323454848|gb|EGB10717.1| hypothetical protein AURANDRAFT_52680 [Aureococcus anophagefferens])

HSP 1 Score: 455.677 bits (1171), Expect = 5.605e-150
Identity = 268/558 (48.03%), Postives = 367/558 (65.77%), Query Frame = 0
Query:   39 GLSRLLPKPTQTYQVHKDDPSPTALARLEISGKKVIPPYGERNGFVPRAVGDFGDGGAFPEVHVVQYPLNMG-KKDAASASNAIVSVDVAADGKVNFDAIVRQGTNRNKIVHSKLSDMRGGDADENVLSKPTPEEEAEQAAKTKSALEALIGGKIAAARPVQLAKA--PGSEEPTYVRYTPNPNAPGYNTNAKQRVIELVDAQVDPMEPAKHKHKKVPRGPPEDPVPVLHSPP----RKVSVEDQEAWKIPPCISNWKNAKGYTIPLDKRLAADGRGLQETTINPKFAALPQALYIAEDKAREQIAARAKIDQKIKKLEREQKEQELRELAARSRMARAGVPGEVGGRREEESVGHYGRAGGGAGGVRERVEDVGE---ERGAEVVRGMTEEERVAA---AQRDKLRVERRKELERDMRKDNMRGAMRKGKLDRDGERDISEKIALGMHVGSAKLTGDEVYDSRLFNQGGGVEAGFGGEDEYNVYNKALFDKGTGSSIYRPR-GDVGVGGLDEDGGADAEAQYKKIANADKF-RPDRGFAGADYHGGGQARDKPVQFE 581
             LSR LP P + Y V KD+      A         IP YG R GFVPR++GDFGDGGA+PEVHV QYPL MG K++A S+S A+V+++V  DG V +DAIV+QG N+ +IV + L D++  +  E+ L+ P+ E EA  A +T++AL A++ GKI +A+P  + +A  P  ++ T+VRYTPNP+APGY+ +A QR+++LVD QVDPM P KHKH K+PRGPP  PVPV         RKV+V DQ++WKIPPC+SNWKNA+GYTIPLDKRLAADGRGLQE T+N  FA L +ALYIAE  AR+ + ARA+I       E+E +E  LR+LAA +R  RA    ++  RR            GGA   R R +       + G E++ G  +E+   A   A+R+++RVER+++ ER MR DN +G M++ +L+R+ +RD+SEK+ALG+  G+AKL G+  +D RLFNQ  G+++GFG + +YNVY+K L D+   ++IYRPR  D G  G       D +AQ   +  + KF  P+RGFAG     G ++RDKPVQFE
Sbjct:    9 ALSRALPTPAREYVVWKDEDKRKKSAPGTARTTAKIPGYGSRRGFVPRSLGDFGDGGAYPEVHVAQYPLGMGTKEEARSSSTAVVALEVGEDGAVKYDAIVKQGENKGRIVQTSLEDVKEKEGAEDALALPSAEAEAAAAQRTQAALGAILDGKINSAKPTHVPEACDPNRQKATFVRYTPNPSAPGYSASASQRIVKLVDQQVDPMAPPKHKHTKIPRGPPSPPVPVPVPVLHSPPRKVTVHDQQSWKIPPCVSNWKNARGYTIPLDKRLAADGRGLQEQTVNNDFATLAEALYIAERSARDDVRARAQIRNSNALREKEAQEARLRDLAASARDERA----KLADRR------------GGAAAPRPRDDGAAAFFGDDGDELLGGGADEDPAVAAGRAEREQVRVERKRDRERQMRLDNAKGDMKRSRLERERDRDVSEKVALGLLKGTAKLAGEAQFDKRLFNQSSGMDSGFGDDGDYNVYSKPLLDREDATAIYRPREADAGKYG-------DGDAQLADLTASSKFAAPERGFAGT-AGAGPRSRDKPVQFE 542          
BLAST of EWM28131.1 vs. NCBI_GenBank
Match: gi|1179546420|ref|XP_020694187.1| (SNW/SKI-interacting protein [Dendrobium catenatum] >gi|1179546422|ref|XP_020694188.1| SNW/SKI-interacting protein [Dendrobium catenatum])

HSP 1 Score: 429.869 bits (1104), Expect = 1.448e-139
Identity = 261/594 (43.94%), Postives = 361/594 (60.77%), Query Frame = 0
Query:   74 IPPYGERNGFVPRAVGDFGDGGAFPEVHVVQYPLNMGKKDAASASNAIVSVDVAADGKVNFDAIVRQGTNRNKIVHSKLSDMRGGDADENVLSKPTPEEEA-----EQAAKTKSALEALIGGKIAAARPVQLAKAPGSEEPTYVRYTPNPNAPGYNTNAKQRVIELVDAQVDPMEPAKHKHKKVPRGPPEDPVPVLHSPPRKVSVEDQEAWKIPPCISNWKNAKGYTIPLDKRLAADGRGLQETTINPKFAALPQALYIAEDKAREQIAARAKIDQKIKKLEREQKEQELRELAARSRMARAGVPGEVGGRREEESVGHYGRAGGGAGGVRERVEDVGEERGAEVVRGMTEEERVAAAQRDKLRVERRKELERDMRKDNMRGAM-RKGKLDRDGERDISEKIALGMHVGSAKLTGDEVYDSRLFNQGGGVEAGFGGEDEYNVYNKALFD-KGTGSSIYRPRGDVGVGGLDEDGGADAEAQYKKIANADKFRPDRGFAGADYHGGGQARDKPVQFEREGGREGGGRESGGSGRREDEEDFFGVGDFVEEGGGGKRKDPLGRIGGRGLMSAGTAGS-KEELE-MGSKRQKINFTEA 658
            +PPYG+R+GFVPR   DFGDGGAFPE+HV QYPL MG+KD    S  I+ + V + GKV FDAIV+Q  N +KIV+S+  D+    + +    K  PEE+      E   +TK+ALE ++  +++AA+P  +     S+E  Y++Y P+  +  +N+ AK+R+I +V+   DP+EP K KHK+VP+     PVPV+HSPPR V+V+DQ+ WKIPPCISNWKN KGYTIPLDKRLAADGRGLQE  IN  FA L +ALY+AE KARE +A R+K+ +++   E+E+KEQELR LA ++R  R G+                         + +  +D G E+        T  ER    QRDK+R ERR+E ER+ R +    AM +K K+ RD +RDISEK+ALGM    A+  G+ +YD RLFNQ  G+E+GF GED+YN+Y+K LF  + T S++YRPR D         GGAD   Q +KI   D+F+PD+ F+G      G  RD+PV+F+                 +++E D FG+  F+ E   GK+   + +IGG G M A    S +++ E  GS R +I+F  A
Sbjct:   49 VPPYGKRSGFVPRKPEDFGDGGAFPEIHVAQYPLGMGRKDEKPGSK-ILPLTVDSSGKVAFDAIVKQNENASKIVYSQHKDLVPKVSTDE---KEEPEEQLQKEIEETTQRTKAALEKIVNVRLSAAQPKNVPTQ--SQESKYIKYKPSQQSAAFNSGAKERIIRMVEMPADPLEPPKFKHKRVPKASGSPPVPVMHSPPRPVTVKDQQDWKIPPCISNWKNPKGYTIPLDKRLAADGRGLQEVQINDNFAKLSEALYVAEQKAREAVAMRSKVQRELMLKEKERKEQELRALAQKARSERTGI--------------APAPVAPAHAMLDDDDDDAGMEQHEPPPHKETRAEREERLQRDKIREERRRERERERRLEAKDAAMGKKSKITRDRDRDISEKVALGMANTGAR-QGEVMYDQRLFNQDKGMESGFTGEDQYNIYDKGLFTAQPTLSTLYRPRKDTDSEMY---GGAD--EQLEKIMKTDRFKPDKAFSGVQDRPSGSKRDRPVEFD-----------------KQEENDPFGLDQFLTEVKKGKKA--MDKIGGGGTMKASAGSSMRDDYEGGGSGRTRISFERA 597          
BLAST of EWM28131.1 vs. NCBI_GenBank
Match: gi|586757697|ref|XP_006853611.1| (SNW/SKI-interacting protein [Amborella trichopoda] >gi|548857272|gb|ERN15078.1| hypothetical protein AMTR_s00056p00045910 [Amborella trichopoda])

HSP 1 Score: 429.098 bits (1102), Expect = 3.037e-139
Identity = 269/633 (42.50%), Postives = 370/633 (58.45%), Query Frame = 0
Query:   35 MATLGLSRLLPKP-TQTYQVH--KDDP-------SPTALARLEISGKKVIPPYGERNGFVPRAVGDFGDGGAFPEVHVVQYPLNMGKKDAASASNAIVSVDVAADGKVNFDAIVRQGTNRNKIVHSKLSDMRGGDADENVLSKPTPEEEAEQAAKTKSALEALIGGKIAAARPVQLAKAPGSEEPTYVRYTPNPNAPGYNTNAKQRVIELVDAQVDPMEPAKHKHKKVPRGPPEDPVPVLHSPPRKVSVEDQEAWKIPPCISNWKNAKGYTIPLDKRLAADGRGLQETTINPKFAALPQALYIAEDKAREQIAARAKIDQKIKKLEREQKEQELRELAARSRMARAGVPGEVGGRREEESVGHYGRAGGGAGGVRERVEDVGEERGAEVVRGMTEEERVAAAQRDKLRVERRKELERDMRKDNMRGAMRKGKLDRDGERDISEKIALGMHVGSAKLTGDEVYDSRLFNQGGGVEAGFGGEDEYNVYNKALFD-KGTGSSIYRPRGDVGVGGLDEDGGADAEAQYKKIANADKFRPDRGFAGADYHGGGQARDKPVQFEREGGREGGGRESGGSGRREDEEDFFGVGDFVEEGGGGKRKDPLGRIGGRGLMSAGT-AGSKEELEMGSKRQKINF 655
            MATL    LLP+P ++T  V+    DP        P   +   +S  K IPPYG+R GFVPR   DFGDGGAFPE+H+ QYPL MG+K+    S  I+ + V A G V FDAIV+Q  N +KIV+S+  D+     ++        EE AE   +TK ALE ++  +++AA+P  + +   S + T+++Y P+  +  +N+ AK+R+I +VD  VDP+EP K KHK+VP+     PVPV+HSPPR V+V+DQ+ WKIPPCISNWKN KGYTIPLDKRLAADGRGLQE  IN  FA L +ALY+AE KARE +  R+KI +++   E+ +KEQELR LA ++R  R G  G V    ++ ++          GG  ER  D+  ER  E VR   EE      +       RR+       +       +K K+ RD +RDISEK+ALGM   +   +G+ +YD RLFNQ  G+E+GF  +D+YN+Y+K LF    T S++YRP+ D      D D    A+ Q +K+   D+FRPD+GFAGA    G   RD+PV+FE+E                 +E D FG+  F+ E   GK+   + +IGG G M A   A  +E  E GS R +++F
Sbjct:    1 MATL--KELLPQPKSETTGVYDFSSDPWFKDRFIDPAKSSSNSVSKAKSIPPYGKRAGFVPRKPEDFGDGGAFPEIHIAQYPLGMGRKEEKRDSK-ILPLTVDAQGNVAFDAIVKQNENASKIVYSQHKDLLPKLINDEEKKDEEEEEIAETTQRTKEALEKIVNVRLSAAQPKNVPQQ--STDATFIKYKPSQQSAAFNSGAKERIIRMVDMPVDPLEPPKFKHKRVPKASGSPPVPVMHSPPRPVTVKDQQDWKIPPCISNWKNPKGYTIPLDKRLAADGRGLQEVQINDNFAKLSEALYVAEQKAREAVEMRSKIQRELMLKEKNRKEQELRALAQKARSERTGA-GPVVAAVDKGTIDGREEISPFNGG--ERRGDM--ERMKENVRETKEEREERLKREAIREERRRERERERRLEAKEVAMGKKSKITRDRDRDISEKVALGM--ATTGRSGEVMYDQRLFNQEKGMESGFAADDQYNIYDKGLFTAHSTLSTLYRPKKDT-----DSDAYGGADEQLEKVLKTDRFRPDKGFAGASEKAG--PRDRPVEFEQEA----------------EEADPFGLDQFLTEVKKGKKA--MDKIGGGGTMKASAGAAMRESYEGGSSRTRVDF 596          
BLAST of EWM28131.1 vs. NCBI_GenBank
Match: gi|1002244267|ref|XP_015626352.1| (PREDICTED: SNW/SKI-interacting protein [Oryza sativa Japonica Group] >gi|47497360|dbj|BAD19399.1| putative GAMYB-binding protein [Oryza sativa Japonica Group] >gi|113537715|dbj|BAF10098.1| Os02g0759800 [Oryza sativa Japonica Group] >gi|125541209|gb|EAY87604.1| hypothetical protein OsI_09015 [Oryza sativa Indica Group] >gi|125583761|gb|EAZ24692.1| hypothetical protein OsJ_08462 [Oryza sativa Japonica Group] >gi|937905967|dbj|BAS81021.1| Os02g0759800 [Oryza sativa Japonica Group])

HSP 1 Score: 425.631 bits (1093), Expect = 8.286e-138
Identity = 268/639 (41.94%), Postives = 370/639 (57.90%), Query Frame = 0
Query:   40 LSRLLPKP---TQTYQVHKDDP------------SPTALARLEISG-KKVIPPYGERNGFVPRAVGDFGDGGAFPEVHVVQYPLNMGKKDAASASNAIVSVDVAADGKVNFDAIVRQGTNRNKIVHSKLSDMRGGDADENVLSKPTPEEEAEQ----AAKTKSALEALIGGKIAAARPVQLAKAPGSEEPTYVRYTPNPNAPGYNTNAKQRVIELVDAQVDPMEPAKHKHKKVPRGPPEDPVPVLHSPPRKVSVEDQEAWKIPPCISNWKNAKGYTIPLDKRLAADGRGLQETTINPKFAALPQALYIAEDKAREQIAARAKIDQKIKKLEREQKEQELRELAARSRMARAGVPGEVGGRREEESVGHYGRAGGGAGGVRERVEDVGEERGAEVVRGMTEEERVAAAQRDKLRVERRKELERDMRKDNMRGAMRKGKLDRDGERDISEKIALGMHVGSAKLTGDEVYDSRLFNQGGGVEAGFGGEDEYNVYNKALFD-KGTGSSIYRPRGDVGVGGLDEDGGADAEAQYKKIANADKFRPDRGFAGADYHGGGQARDKPVQFEREGGREGGGRESGGSGRREDEEDFFGVGDFVEEGGGGKRKDPLGRIGGRGLMSA-GTAGSKEELE-MGSKRQKINF 655
            L  LLP P     T+  H  DP            S  A A  + SG  K +PPYG+R GFVPR   DFGDGGAFPE+HV QYPL MG++D    S  I+++ V A G V FDA+V+QG N +KIV+SK SD+    A  +  +    EE  +Q      +TK+ALE ++  +++AA+P  +       E  +++Y P+  +  +N+ AK+R+I + +   DP+EP K KHK+VPR     PVPV+HSPPR V+V+DQ+ WKIPPCISNWKN KGYTIPLDKRLAADGRGLQE  IN  FA L +ALY+AE KARE +  R+K+ ++++  E+E+KEQELR LA ++RM R G P    G            AGGG G V +R ED+  E+  E  R   EE      +       RR+       +       +K KL RD +RD+SEKIALGM        G+ +YD RLFNQ  G+++GF  +D+YN+Y+K LF  + T S++YRP+ D      D D   DA+ Q +K+   D+F+PD+GF+GA    G   RD+PV+F+                 +++E D FG+  F+ E   GK+   + +IG  G M A G +  +++ E  GS R +INF
Sbjct:    4 LKELLPTPKAAASTFYDHSSDPWFKERYGGESAQSDAAAAAAKPSGPAKPVPPYGKRGGFVPRRPEDFGDGGAFPEIHVAQYPLGMGRRDEKGGSK-ILALTVDAKGSVAFDAVVKQGENASKIVYSKHSDLVPKIATADSEATADDEEYQKQIEETTERTKAALEKVVNVRLSAAQPKNVPTH--DSESKFIKYKPSQQSAAFNSGAKERIIRMSEMAQDPLEPPKFKHKRVPRASGSPPVPVMHSPPRPVTVKDQQDWKIPPCISNWKNPKGYTIPLDKRLAADGRGLQEVQINDNFAKLSEALYVAEQKAREAVQMRSKVQRELQLKEKERKEQELRALAQKARMERTGAPPAPTGV----------PAGGGRGAVDDREEDMDLEQPREQRRESREEREARIERDRIREERRRERERERRLEARDAAMGKKSKLTRDRDRDVSEKIALGMASTGGAKGGEVMYDQRLFNQDKGMDSGFATDDQYNIYSKGLFTAQPTLSTLYRPKKDG-----DSDVYGDADEQLEKVMKTDRFKPDKGFSGASERSG--KRDRPVEFD-----------------KQEENDPFGLDQFLTEVKKGKKA--VEKIGSGGAMRASGGSSMRDDYEGGGSGRSRINF 603          
BLAST of EWM28131.1 vs. NCBI_GenBank
Match: gi|586754905|ref|XP_006852956.1| (SNW/SKI-interacting protein [Amborella trichopoda] >gi|548856570|gb|ERN14423.1| hypothetical protein AMTR_s00033p00242900 [Amborella trichopoda])

HSP 1 Score: 424.861 bits (1091), Expect = 1.462e-137
Identity = 270/644 (41.93%), Postives = 370/644 (57.45%), Query Frame = 0
Query:   35 MATLGLSRLLPKPTQT----YQVHKD--------DPSPTALARLEISGKKVIPPYGERNGFVPRAVGDFGDGGAFPEVHVVQYPLNMGKKDAASASNAIVSVDVAADGKVNFDAIVRQGTNRNKIVHSKLSDMRGGDADENVLSKPTPEEE-AEQAAKTKSALEALIGGKIAAARPVQLAKAPGSEEPTYVRYTPNPNAPGYNTNAKQRVIELVDAQVDPMEPAKHKHKKVPRGPPEDPVPVLHSPPRKVSVEDQEAWKIPPCISNWKNAKGYTIPLDKRLAADGRGLQETTINPKFAALPQALYIAEDKAREQIAARAKIDQKIKKLEREQKEQELRELAARSRMARAGV--------PGEVGGRREEESVGHYGRAGGGAGGVRERVEDVGEERGAEVVRGMTEEERVAAAQRDKLRVERRKELERDMRKDNMRGAMRKGKLDRDGERDISEKIALGMHVGSAKLTGDEVYDSRLFNQGGGVEAGFGGEDEYNVYNKALFD-KGTGSSIYRPRGDVGVGGLDEDGGADAEAQYKKIANADKFRPDRGFAGADYHGGGQARDKPVQFEREGGREGGGRESGGSGRREDEEDFFGVGDFVEEGGGGKRKDPLGRIGGRGLMSAGT-AGSKEELEMGSKRQKINF 655
            MATL    LLP P  T    Y    D        DP+ +++     S  K IPPYG+R GFVPR   DFGDGGAFPE+H+ QYPL MG+K+    S  I+ + V A G V FDAIV+Q  N +KIV+S+  D+     ++        EEE A    +TK ALE ++  +++AA+P  + +   S + T+++Y P+  +  +N+ AK+R+I +VD  VDP+EP K KHK+VP+     PVPV+HSPPR V+V+DQ+ WKIPPCISNWKN KGYTIPLDKRLAADGRGLQE  IN  FA L +ALY+AE KARE +  R+KI +++   E+ +KEQELR LA ++R  R G          G + G  E     + G   G    V+E + +  E R          EER+      + R   R+   R   K+   G  +K K+ RD +RDISEK+ALGM   +   +G+ +YD RLFNQ  G+E+GF  +D+YN+Y+K LF  + T S++YRP+ D      D D    A+ Q +K+   D+FRPDRGF GA    G   RD+PV+FE+E                 +E D FG+  F+ E   GK+   + +IGG G M A   A  +E  E GS R +++F
Sbjct:    1 MATL--KELLPHPKSTTTGVYDFSSDPWFKDRFIDPAKSSIN--SASKAKPIPPYGKRAGFVPRKPEDFGDGGAFPEIHIAQYPLGMGRKEEKRDSK-ILPLTVDAHGNVAFDAIVKQNENASKIVYSQHKDLLPKLMNDEEKKDEEEEEEIANTTQRTKEALEKIVNVRLSAAQPKNVPQQ--STDATFIKYKPSQQSAAFNSGAKERIIRMVDMPVDPLEPPKFKHKRVPKALGSPPVPVMHSPPRPVTVKDQQDWKIPPCISNWKNPKGYTIPLDKRLAADGRGLQEVQINDNFAKLSEALYVAEQKAREAVEMRSKIQRELMLKEKNRKEQELRALAQKARSERTGAGPVVAASDKGAIDGAEEVTPSFNGGERRGDFDRVKENIRETKEGR----------EERLKREAIREERRRERERERRLEAKEVAMG--KKSKITRDRDRDISEKVALGM--ATTGRSGEVMYDQRLFNQEKGMESGFATDDQYNIYDKGLFTAQSTLSTLYRPKKDA-----DSDMYGGADEQLEKVLKTDRFRPDRGFEGASEKTG--PRDRPVEFEKEA----------------EEADPFGLDQFLTEVKKGKKA--MDKIGGGGTMKASAGAAMRESYEGGSSRTRVDF 598          
BLAST of EWM28131.1 vs. NCBI_GenBank
Match: gi|1002844146|ref|XP_015689371.1| (PREDICTED: SNW/SKI-interacting protein [Oryza brachyantha])

HSP 1 Score: 424.861 bits (1091), Expect = 1.729e-137
Identity = 254/592 (42.91%), Postives = 356/592 (60.14%), Query Frame = 0
Query:   72 KVIPPYGERNGFVPRAVGDFGDGGAFPEVHVVQYPLNMGKKDAASASNAIVSVDVAADGKVNFDAIVRQGTNRNKIVHSKLSDMRGGDADENVLSKPTPEEE-----AEQAAKTKSALEALIGGKIAAARPVQLAKAPGSEEPTYVRYTPNPNAPGYNTNAKQRVIELVDAQVDPMEPAKHKHKKVPRGPPEDPVPVLHSPPRKVSVEDQEAWKIPPCISNWKNAKGYTIPLDKRLAADGRGLQETTINPKFAALPQALYIAEDKAREQIAARAKIDQKIKKLEREQKEQELRELAARSRMARAGVPGEVGGRREEESVGHYGRAGGGAGGVRERVEDVGEERGAEVVRGMTEEERVAAAQRDKLRVERRKELERDMRKDNMRGAMRKGKLDRDGERDISEKIALGMHVGSAKLTGDEVYDSRLFNQGGGVEAGFGGEDEYNVYNKALFD-KGTGSSIYRPRGDVGVGGLDEDGGADAEAQYKKIANADKFRPDRGFAGADYHGGGQARDKPVQFEREGGREGGGRESGGSGRREDEEDFFGVGDFVEEGGGGKRKDPLGRIGGRGLMSA-GTAGSKEELE-MGSKRQKINF 655
            K +PPYG+R GFVPR   DFGDGGAFPE+HV QYPL MG++D    S  I+++ V A G + FDA+V+QG N +KIV+SK SD+    A  +  S+ T +EE      E   +TK+ALE ++  +++AA+P  +       E  +++Y P+  +  +N+ AK+R+I + +   DP+EP K KHK+VPR     PVPV+HSPPR V+V+DQ+ WKIPPCISNWKN KGYTIPLDKRLAADGRGLQE  IN  FA L +ALY+AE KARE +  R+K+ ++++  E+E+KEQELR LA ++RM R G P    G            A GG G V +R ED+  E+  E  R   EE+     +       RR+       +       +K KL RD +RD+SEKIALGM        G+ +YD RLFNQ  G+++GF  +D+YN+Y+K LF  + T S++YRP+ D      D D   DA+ Q +K+   D+F+PD+GF+GA    G   RD+PV+F+                 +++E D FG+  F+ E   GK+   + +IG  G M A G +  +++ E  GS R +INF
Sbjct:   51 KPVPPYGKRGGFVPRRPEDFGDGGAFPEIHVAQYPLGMGRRDEKGGSK-ILALTVDAKGSIAFDAVVKQGENASKIVYSKHSDLVPKIATAD--SEATEDEEYQKQIEETTERTKAALEKVVNVRLSAAQPKNVPTH--DSESKFIKYKPSQQSAAFNSGAKERIIRMSEMAQDPLEPPKFKHKRVPRASGSPPVPVMHSPPRPVTVKDQQDWKIPPCISNWKNPKGYTIPLDKRLAADGRGLQEVQINDNFAKLSEALYVAEQKAREAVQMRSKVQRELQLKEKERKEQELRALAQKARMERTGAPPSSAG----------FPASGGRGAVDDRDEDMDLEQPREQRRESREEKEARIERDRIREERRRERERERRLEARDAAMGKKSKLTRDRDRDVSEKIALGMASTGGAKGGEVMYDQRLFNQDKGMDSGFAADDQYNIYSKGLFTAQPTLSTLYRPKKDG-----DSDVYGDADEQLEKVMKTDRFKPDKGFSGASERSG--KRDRPVEFD-----------------KQEENDPFGLDQFLTEVKKGKKA--VEKIGSGGTMKASGGSSMRDDYEGGGSGRSRINF 601          
BLAST of EWM28131.1 vs. NCBI_GenBank
Match: gi|1035924225|gb|OAY53813.1| (hypothetical protein MANES_03G025400 [Manihot esculenta])

HSP 1 Score: 424.861 bits (1091), Expect = 2.144e-137
Identity = 264/634 (41.64%), Postives = 367/634 (57.89%), Query Frame = 0
Query:   39 GLSRLLP---KPTQTYQVHKDDP------SPTALARLEISGKKVIPPYGERNGFVPRAVGDFGDGGAFPEVHVVQYPLNMGKKDAASASNAIVSVDVAADGKVNFDAIVRQGTNRNKIVHSKLSDM-----RGGDADENVLSKPTPEEEAEQAAKTKSALEALIGGKIAAARPVQLAKAPGSEEPTYVRYTPNPNAPGYNTNAKQRVIELVDAQVDPMEPAKHKHKKVPRGPPEDPVPVLHSPPRKVSVEDQEAWKIPPCISNWKNAKGYTIPLDKRLAADGRGLQETTINPKFAALPQALYIAEDKAREQIAARAKIDQKIKKLEREQKEQELRELAARSRMARAG-VPGEVGGRREEESVGHYGRAGGGAGGVRERVEDVGEERGAEVVRGMTEEERVAAAQRDKLRVERRKELERDMRKDNMRGAMRKGKLDRDGERDISEKIALGMHVGSAKLTGDEVYDSRLFNQGGGVEAGFGGEDEYNVYNKALFD-KGTGSSIYRPRGDVGVGGLDEDGGADAEAQYKKIANADKFRPDRGFAGADYHGGGQARDKPVQFEREGGREGGGRESGGSGRREDEEDFFGVGDFVEEGGGGKRKDPLGRIGGRGLMSAGTAGSKEE-LEMGSKRQKINF 655
             L  LLP     T TY  H  DP      S +   +  +   K +PPY ER GFVPR V DFGDGGAFPE+H+ QYPL+MG+  +A+    I+ + V A G V +DAIV+Q  N  KIV+S+  D+     R  +  +    +   +E  E   +TK+ALE ++  +++AA+P  + K   S +  Y++Y P+  +  +N+ AK+R+I +V+  VDP+EP K KHK+VP+     PVPV+HSPPR V+V+DQ+ WKIPPCISNWKN KGYTIPLDKRLAADGRGLQ+  IN  FA L +ALY+AE KARE +A R+K+ +++   E+E+KEQELR LA ++R  R G VP        ++S        G    VRER +DV  E   E    +  E+     +R++ R  R +       KD   G  +K K+ RD +RDISEK+ALGM    A   G+ +YD RLFNQ  G+++GF  +D+YNVY+K LF  + T S++YRP+ DV     D  GGAD   Q  KI   ++F+PD+ FAG     G   RD+PV+FE++                 +E D FG+  F+ E   GK+   + ++G  G M A    S  +  E GS R +I F
Sbjct:    3 ALKDLLPPAKSTTTTYYDHSSDPWFKQRFSSSEAEQTTVVNHKPVPPYMERKGFVPRKVEDFGDGGAFPEIHIAQYPLDMGRSKSANPGTKILPLTVDAHGNVAYDAIVKQNENAKKIVYSQHKDLIPKILRNDEDKDEDEDEDLQKEIEETTQETKAALEKIVNVRLSAAQPKNVPKQ--SSDSKYIKYKPSQQSAAFNSGAKERIIRMVEMPVDPLEPPKFKHKRVPKASGSPPVPVMHSPPRPVTVKDQQDWKIPPCISNWKNPKGYTIPLDKRLAADGRGLQDVQINDNFAKLSEALYVAEQKAREAVAMRSKVQKEMMMKEKERKEQELRALAQKARSERTGAVPPSSAPISSDKSAMGDVDMTGDYERVREREKDVPRESREEREERLQREKIREERRRERERERRLEA------KDAAMG--KKSKITRDRDRDISEKVALGMASTGAGRGGEVMYDQRLFNQEKGMDSGFATDDQYNVYDKGLFTAQPTLSTLYRPKKDVDA---DVYGGAD--EQLDKILKTERFKPDKAFAGTSEKTG--PRDRPVEFEKDA----------------EEADPFGLDQFLTEVKKGKKA--MDKVGTGGTMRASAGSSMRDGYEGGSGRTRIGF 601          
The following BLAST results are available for this feature:
BLAST of EWM28131.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585110475|gb|EWM28131.1|0.000e+0100.00puff-specific protein bx42 [Nannochloropsis gadita... [more]
gi|553178664|ref|XP_005852589.1|0.000e+0100.00SNW domain-containing protein 1 [Nannochloropsis g... [more]
gi|298710859|emb|CBJ26368.1|3.010e-17548.26conserved unknown protein [Ectocarpus siliculosus][more]
gi|676382055|ref|XP_009034306.1|5.605e-15048.03hypothetical protein AURANDRAFT_52680 [Aureococcus... [more]
gi|1179546420|ref|XP_020694187.1|1.448e-13943.94SNW/SKI-interacting protein [Dendrobium catenatum]... [more]
gi|586757697|ref|XP_006853611.1|3.037e-13942.50SNW/SKI-interacting protein [Amborella trichopoda]... [more]
gi|1002244267|ref|XP_015626352.1|8.286e-13841.94PREDICTED: SNW/SKI-interacting protein [Oryza sati... [more]
gi|586754905|ref|XP_006852956.1|1.462e-13741.93SNW/SKI-interacting protein [Amborella trichopoda]... [more]
gi|1002844146|ref|XP_015689371.1|1.729e-13742.91PREDICTED: SNW/SKI-interacting protein [Oryza brac... [more]
gi|1035924225|gb|OAY53813.1|2.144e-13741.64hypothetical protein MANES_03G025400 [Manihot escu... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2559rna2559Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications