EWM28122.1, cds2538 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28122.1 vs. NCBI_GenBank
Match: gi|585110466|gb|EWM28122.1| (fusca protein fus6 [Nannochloropsis gaditana]) HSP 1 Score: 1107.82 bits (2864), Expect = 0.000e+0 Identity = 539/539 (100.00%), Postives = 539/539 (100.00%), Query Frame = 0
Query: 1 MTLFIQDLLLKYMLLQKALPAFSSISHASKAHLLFWIYVYTADIDTYAARYAGYTKLRRLLFIAQHCKSRELDAYRLALDALTQPRSLNIQLYRKVMGLVAGRLGPAYSLDATWAEEIDKRAAMQKERLESDLQTSRTGMAKESIRLGYQDLGEFHYARGDLDNALKNFVRTRDYCSIARHNVEMCLNVIKVSVGLDSFAHVSTYVSKAEHATGMNDPKVRHKLKAAAGLAQLSQHNYDSAARKFLDCGPSGLTRGTPQDPGPASFAHVLAPEDVATYGGLCALASLDRPELKRSLLENTTFKGLLDLVPMVRELIYDFCRSRYGACLGALAALKPELLLDVHLHRHVESLYQRIRERCLLQYFIPYLSVDLGSMANTFDTPLPRLEKEIAGLIVTNRMPARIDSQRKTLHRRQVDPREAGYKKVFSMGQEFLREMRAMLFRMSLLEHSVFVEAETRGGAGGGGDARSGGRAGTLGSPHPSQGRAARGQGAGGGTSQARGGDAVLEGESSPEEDTDMGEDFGSANQQDPDLEATLTGEG 539
MTLFIQDLLLKYMLLQKALPAFSSISHASKAHLLFWIYVYTADIDTYAARYAGYTKLRRLLFIAQHCKSRELDAYRLALDALTQPRSLNIQLYRKVMGLVAGRLGPAYSLDATWAEEIDKRAAMQKERLESDLQTSRTGMAKESIRLGYQDLGEFHYARGDLDNALKNFVRTRDYCSIARHNVEMCLNVIKVSVGLDSFAHVSTYVSKAEHATGMNDPKVRHKLKAAAGLAQLSQHNYDSAARKFLDCGPSGLTRGTPQDPGPASFAHVLAPEDVATYGGLCALASLDRPELKRSLLENTTFKGLLDLVPMVRELIYDFCRSRYGACLGALAALKPELLLDVHLHRHVESLYQRIRERCLLQYFIPYLSVDLGSMANTFDTPLPRLEKEIAGLIVTNRMPARIDSQRKTLHRRQVDPREAGYKKVFSMGQEFLREMRAMLFRMSLLEHSVFVEAETRGGAGGGGDARSGGRAGTLGSPHPSQGRAARGQGAGGGTSQARGGDAVLEGESSPEEDTDMGEDFGSANQQDPDLEATLTGEG
Sbjct: 1 MTLFIQDLLLKYMLLQKALPAFSSISHASKAHLLFWIYVYTADIDTYAARYAGYTKLRRLLFIAQHCKSRELDAYRLALDALTQPRSLNIQLYRKVMGLVAGRLGPAYSLDATWAEEIDKRAAMQKERLESDLQTSRTGMAKESIRLGYQDLGEFHYARGDLDNALKNFVRTRDYCSIARHNVEMCLNVIKVSVGLDSFAHVSTYVSKAEHATGMNDPKVRHKLKAAAGLAQLSQHNYDSAARKFLDCGPSGLTRGTPQDPGPASFAHVLAPEDVATYGGLCALASLDRPELKRSLLENTTFKGLLDLVPMVRELIYDFCRSRYGACLGALAALKPELLLDVHLHRHVESLYQRIRERCLLQYFIPYLSVDLGSMANTFDTPLPRLEKEIAGLIVTNRMPARIDSQRKTLHRRQVDPREAGYKKVFSMGQEFLREMRAMLFRMSLLEHSVFVEAETRGGAGGGGDARSGGRAGTLGSPHPSQGRAARGQGAGGGTSQARGGDAVLEGESSPEEDTDMGEDFGSANQQDPDLEATLTGEG 539
BLAST of EWM28122.1 vs. NCBI_GenBank
Match: gi|585110465|gb|EWM28121.1| (fusca protein fus6 [Nannochloropsis gaditana]) HSP 1 Score: 1022.69 bits (2643), Expect = 0.000e+0 Identity = 497/497 (100.00%), Postives = 497/497 (100.00%), Query Frame = 0
Query: 43 DIDTYAARYAGYTKLRRLLFIAQHCKSRELDAYRLALDALTQPRSLNIQLYRKVMGLVAGRLGPAYSLDATWAEEIDKRAAMQKERLESDLQTSRTGMAKESIRLGYQDLGEFHYARGDLDNALKNFVRTRDYCSIARHNVEMCLNVIKVSVGLDSFAHVSTYVSKAEHATGMNDPKVRHKLKAAAGLAQLSQHNYDSAARKFLDCGPSGLTRGTPQDPGPASFAHVLAPEDVATYGGLCALASLDRPELKRSLLENTTFKGLLDLVPMVRELIYDFCRSRYGACLGALAALKPELLLDVHLHRHVESLYQRIRERCLLQYFIPYLSVDLGSMANTFDTPLPRLEKEIAGLIVTNRMPARIDSQRKTLHRRQVDPREAGYKKVFSMGQEFLREMRAMLFRMSLLEHSVFVEAETRGGAGGGGDARSGGRAGTLGSPHPSQGRAARGQGAGGGTSQARGGDAVLEGESSPEEDTDMGEDFGSANQQDPDLEATLTGEG 539
DIDTYAARYAGYTKLRRLLFIAQHCKSRELDAYRLALDALTQPRSLNIQLYRKVMGLVAGRLGPAYSLDATWAEEIDKRAAMQKERLESDLQTSRTGMAKESIRLGYQDLGEFHYARGDLDNALKNFVRTRDYCSIARHNVEMCLNVIKVSVGLDSFAHVSTYVSKAEHATGMNDPKVRHKLKAAAGLAQLSQHNYDSAARKFLDCGPSGLTRGTPQDPGPASFAHVLAPEDVATYGGLCALASLDRPELKRSLLENTTFKGLLDLVPMVRELIYDFCRSRYGACLGALAALKPELLLDVHLHRHVESLYQRIRERCLLQYFIPYLSVDLGSMANTFDTPLPRLEKEIAGLIVTNRMPARIDSQRKTLHRRQVDPREAGYKKVFSMGQEFLREMRAMLFRMSLLEHSVFVEAETRGGAGGGGDARSGGRAGTLGSPHPSQGRAARGQGAGGGTSQARGGDAVLEGESSPEEDTDMGEDFGSANQQDPDLEATLTGEG
Sbjct: 55 DIDTYAARYAGYTKLRRLLFIAQHCKSRELDAYRLALDALTQPRSLNIQLYRKVMGLVAGRLGPAYSLDATWAEEIDKRAAMQKERLESDLQTSRTGMAKESIRLGYQDLGEFHYARGDLDNALKNFVRTRDYCSIARHNVEMCLNVIKVSVGLDSFAHVSTYVSKAEHATGMNDPKVRHKLKAAAGLAQLSQHNYDSAARKFLDCGPSGLTRGTPQDPGPASFAHVLAPEDVATYGGLCALASLDRPELKRSLLENTTFKGLLDLVPMVRELIYDFCRSRYGACLGALAALKPELLLDVHLHRHVESLYQRIRERCLLQYFIPYLSVDLGSMANTFDTPLPRLEKEIAGLIVTNRMPARIDSQRKTLHRRQVDPREAGYKKVFSMGQEFLREMRAMLFRMSLLEHSVFVEAETRGGAGGGGDARSGGRAGTLGSPHPSQGRAARGQGAGGGTSQARGGDAVLEGESSPEEDTDMGEDFGSANQQDPDLEATLTGEG 551
BLAST of EWM28122.1 vs. NCBI_GenBank
Match: gi|168011167|ref|XP_001758275.1| (predicted protein [Physcomitrella patens] >gi|162690731|gb|EDQ77097.1| predicted protein [Physcomitrella patens]) HSP 1 Score: 416.387 bits (1069), Expect = 1.659e-138 Identity = 207/406 (50.99%), Postives = 279/406 (68.72%), Query Frame = 0
Query: 43 DIDTYAARYAGYTKLRRLLFIAQHCKSR--ELDAYRLALDALTQPRSLNIQLYRKVMGLVAGRLGPAYSLDATWAEEIDKRAAMQKERLESDLQTSRTGMAKESIRLGYQDLGEFHYARGDLDNALKNFVRTRDYCSIARHNVEMCLNVIKVSVGLDSFAHVSTYVSKAEHATGMNDPKVRHKLKAAAGLAQLSQHNYDSAARKFLDCGPSGLTRGTPQDPGPASFAHVLAPEDVATYGGLCALASLDRPELKRSLLENTTFKGLLDLVPMVRELIYDFCRSRYGACLGALAALKPELLLDVHLHRHVESLYQRIRERCLLQYFIPYLSVDLGSMANTFDTPLPRLEKEIAGLIVTNRMPARIDSQRKTLHRRQVDPREAGYKKVFSMGQEFLREMRAMLFRMSLL 446
D+++YA+ Y+G+TK+ RL FIA H SR EL+A R+ALD + + N L+++ + + GRLGP Y LD W + +++RAA ++E+LE +L RT + KESIR+GY DLG+FHYARGDL A K +VRTRDYC+ ++H + MCLNVI VS+ L F HVS YVSKA+ + DP V KLK AAGLA L Y AARKF+D T + G ++++ V+AP+DVATYGGLCALAS DR ELK +++N F+ L+LVP VRELI+DF SRY +CLG L LKP LLLD+HL+ HVE+LY++IR + L+QY P++SVDL +MA+ F T + LEKE+A LI N++ ARIDS K L+ R D R +++V G +F RE RAML R +L+
Sbjct: 20 DVESYASLYSGHTKIARLHFIADHSNSRNLELEALRMALDEIRKGE--NTVLFKECVEKINGRLGPGYGLDQEWIDTVERRAAQRQEKLEMELNGYRTNLIKESIRMGYNDLGDFHYARGDLQQAFKCYVRTRDYCTTSKHIIAMCLNVILVSIELGHFVHVSNYVSKADQTPDVQDPVVLAKLKCAAGLAHLESKKYKLAARKFVD---------TNFELG-SNYSDVIAPQDVATYGGLCALASFDRAELKSKVIDNINFRNFLELVPEVRELIHDFYASRYASCLGYLQKLKPNLLLDIHLYDHVETLYEQIRHKALIQYTNPFISVDLNTMASAFKTSVTGLEKELAALITENQIQARIDSHNKILYARHADQRNTTFQRVLQTGSDFQRETRAMLLRANLM 413
BLAST of EWM28122.1 vs. NCBI_GenBank
Match: gi|1026756136|gb|OAE18628.1| (hypothetical protein AXG93_1923s1850 [Marchantia polymorpha subsp. ruderalis]) HSP 1 Score: 416.772 bits (1070), Expect = 5.234e-138 Identity = 208/413 (50.36%), Postives = 278/413 (67.31%), Query Frame = 0
Query: 43 DIDTYAARYAGYTKLRRLLFIAQHCKSR--ELDAYRLALDALTQPRSLNIQLYRKVMGLVAGRLGPAYSLDATWAEEIDKRAAMQKERLESDLQTSRTGMAKESIRLGYQDLGEFHYARGDLDNALKNFVRTRDYCSIARHNVEMCLNVIKVSVGLDSFAHVSTYVSKAEHATGMNDPKVRHKLKAAAGLAQLSQHNYDSAARKFLDCGPSGLTRGTPQDPGPASFAHVLAPEDVATYGGLCALASLDRPELKRSLLENTTFKGLLDLVPMVRELIYDFCRSRYGACLGALAALKPELLLDVHLHRHVESLYQRIRERCLLQYFIPYLSVDLGSMANTFDTPLPRLEKEIAGLIVTNRMPARIDSQRKTLHRRQVDPREAGYKKVFSMGQEFLREMRAMLFRMSLLEHSVFVE 453
D+++YA+ Y G+TK+ RL FIA HC SR EL+A R+A D + R N LYR+ + +AGRLG Y LD W + +D+RAA ++E+LE +L +T + KESIR+GY DLG+F Y RGDL A K +VRTRDYC+ ++H + MCLNVI VS+ L F HVS YVSKA+ + DP V KL+ AAGLA L Y AARKF+D T + G +F V+AP+DVATYGGLCALAS DR ELK +++N F+ L+LVP VRELI+DF SRY +CLG L LKP LLLD+HL+ HVE+LY+++R + L+QY P++SVDL +MA+ F T + LEKE+A LI+ N++ ARIDS K L R D R A +++V G +F R+ RAML R +L+ H ++
Sbjct: 47 DVESYASLYTGHTKIARLHFIADHCHSRALELEALRMASDEI--KRGENTALYRESVDKIAGRLGSTYLLDQEWVDVVDRRAAQRQEKLEMELNGYKTNLIKESIRMGYNDLGDFFYGRGDLQQAFKCYVRTRDYCTTSKHIIAMCLNVILVSIELGQFVHVSNYVSKADQTPDVQDPIVLAKLRCAAGLAHLESKKYKLAARKFVD---------THFELGN-NFTEVIAPQDVATYGGLCALASFDRAELKSKVIDNINFRNFLELVPEVRELIHDFYASRYASCLGYLQKLKPNLLLDIHLYDHVEALYEQVRHKALIQYTNPFISVDLNTMASAFKTSVAGLEKELAALIMENQIQARIDSHNKILFARHADQRNATFQRVLQTGSDFQRDTRAMLLRANLMRHDFIMK 447
BLAST of EWM28122.1 vs. NCBI_GenBank
Match: gi|672159518|ref|XP_008799523.1| (PREDICTED: COP9 signalosome complex subunit 1 [Phoenix dactylifera]) HSP 1 Score: 413.69 bits (1062), Expect = 4.064e-137 Identity = 206/408 (50.49%), Postives = 275/408 (67.40%), Query Frame = 0
Query: 43 DIDTYAARYAGYTKLRRLLFIAQHCKSR--ELDAYRLALDALTQPRSLNIQLYRKVMGLVAGRLGPAYSLDATWAEEIDKRAAMQKERLESDLQTSRTGMAKESIRLGYQDLGEFHYARGDLDNALKNFVRTRDYCSIARHNVEMCLNVIKVSVGLDSFAHVSTYVSKAEHATGMNDPKVRHKLKAAAGLAQLSQHNYDSAARKFLDCGPSGLTRGTPQDPGPASFAHVLAPEDVATYGGLCALASLDRPELKRSLLENTTFKGLLDLVPMVRELIYDFCRSRYGACLGALAALKPELLLDVHLHRHVESLYQRIRERCLLQYFIPYLSVDLGSMANTFDTPLPRLEKEIAGLIVTNRMPARIDSQRKTLHRRQVDPREAGYKKVFSMGQEFLREMRAMLFRMSLLEH 448
D++ YA+ Y G TK+ RLLFIA C + +L+A RLA D + + + QLYR+ +AGRLGP Y+LD WA+ ID+RA +K++LE++L +T + KESIR+GY DLG+F+YA G L +A KN+VRTRDYC+ ++H ++MCLNVI VS+ L F HVS YVSKAE DP KL+ AAGLA L Y AARKFL+ GP ++A V+AP+DVATYGGLCAL+S DR ELK +++N F+ L+LVP VRELI+DF SRY +CL L LKP LLLD+HLH HVE+LY +IR + ++QY P++SVDL +MA+ F T + LEKE+ LI N++ ARIDS K L+ R D R A +++V G EF R+ RAML R +L++H
Sbjct: 41 DVEAYASLYTGRTKVTRLLFIADRCGNEGMQLEALRLAYDEIKKGE--DSQLYREAASKIAGRLGPQYTLDQAWADSIDRRAEQRKDKLENELSGYKTNLIKESIRMGYNDLGDFYYAHGQLGDAFKNYVRTRDYCTTSKHIIQMCLNVILVSIELGQFMHVSNYVSKAEQTPDTLDPVTVAKLRCAAGLAYLEAKKYKLAARKFLETGPE----------LGNNYAEVIAPQDVATYGGLCALSSFDRTELKNKVIDNINFRNFLELVPEVRELIHDFYASRYASCLEYLENLKPNLLLDIHLHDHVETLYTQIRHKAIIQYTHPFISVDLHTMADAFKTGVAGLEKELEALITDNQIQARIDSHNKILYARHADQRNATFQRVLQTGVEFERDARAMLLRANLIKH 436
BLAST of EWM28122.1 vs. NCBI_GenBank
Match: gi|1070964966|gb|OEL29857.1| (COP9 signalosome complex subunit 1 [Dichanthelium oligosanthes]) HSP 1 Score: 412.149 bits (1058), Expect = 1.294e-136 Identity = 197/408 (48.28%), Postives = 279/408 (68.38%), Query Frame = 0
Query: 43 DIDTYAARYAGYTKLRRLLFIAQHC--KSRELDAYRLALDALTQPRSLNIQLYRKVMGLVAGRLGPAYSLDATWAEEIDKRAAMQKERLESDLQTSRTGMAKESIRLGYQDLGEFHYARGDLDNALKNFVRTRDYCSIARHNVEMCLNVIKVSVGLDSFAHVSTYVSKAEHATGMNDPKVRHKLKAAAGLAQLSQHNYDSAARKFLDCGPSGLTRGTPQDPGPASFAHVLAPEDVATYGGLCALASLDRPELKRSLLENTTFKGLLDLVPMVRELIYDFCRSRYGACLGALAALKPELLLDVHLHRHVESLYQRIRERCLLQYFIPYLSVDLGSMANTFDTPLPRLEKEIAGLIVTNRMPARIDSQRKTLHRRQVDPREAGYKKVFSMGQEFLREMRAMLFRMSLLEH 448
D++ YA +Y+G T+L RL+F+A+ C ++ +L+A R+A D + R ++QL+R V + GRLGP Y LD W + + +RA +KE+LE++L RT + KESIR+GY D+G+F YA G L +A K+++RTRDYC+ ++H V+MC+NVI VS+ L FAHVS YVSKAE + DP + KL+AAAGLA L Y AARKF++ +G+ G +++ V+AP+DVA YG LCALAS DR +LK +++N F+ L+LVP VREL+ DF SRYG+CLG L LKP LLLD+HLH HVE+LY IR + ++QY +P++SVDL +MA F T + LEKE+A LI N++ ARIDS K L+ R D R +++V G EF R++++ML R +LL+H
Sbjct: 36 DVEAYAGQYSGRTRLARLIFVAERCGVEAMQLEALRMAYDEI--KRREDVQLHRDVAHKINGRLGPRYGLDQAWVDNVSRRAEQRKEKLENELNGYRTNLIKESIRMGYNDIGDFFYAHGQLSDAFKSYIRTRDYCTTSKHIVQMCMNVILVSIELGQFAHVSNYVSKAEQTPDLLDPIIVAKLRAAAGLANLETKKYKLAARKFVE---TGIELGN-------NYSEVIAPQDVAVYGALCALASFDRSDLKSKVIDNINFRNFLELVPEVRELVNDFYASRYGSCLGHLEKLKPNLLLDIHLHEHVETLYTDIRHKAIIQYTLPFISVDLNTMATAFKTSVSMLEKELAALITENKIQARIDSHNKILYARHADQRNTTFQRVLQTGNEFERDVKSMLLRANLLKH 431
BLAST of EWM28122.1 vs. NCBI_GenBank
Match: gi|225453732|ref|XP_002272895.1| (PREDICTED: COP9 signalosome complex subunit 1 [Vitis vinifera] >gi|296089065|emb|CBI38768.3| unnamed protein product, partial [Vitis vinifera]) HSP 1 Score: 410.994 bits (1055), Expect = 3.511e-136 Identity = 206/414 (49.76%), Postives = 275/414 (66.43%), Query Frame = 0
Query: 43 DIDTYAARYAGYTKLRRLLFIAQHCKSREL--DAYRLALDALTQPRSLNIQLYRKVMGLVAGRLGPAYSLDATWAEEIDKRAAMQKERLESDLQTSRTGMAKESIRLGYQDLGEFHYARGDLDNALKNFVRTRDYCSIARHNVEMCLNVIKVSVGLDSFAHVSTYVSKAEHATGMNDPKVRHKLKAAAGLAQLSQHNYDSAARKFLDCGPSGLTRGTPQDPGPASFAHVLAPEDVATYGGLCALASLDRPELKRSLLENTTFKGLLDLVPMVRELIYDFCRSRYGACLGALAALKPELLLDVHLHRHVESLYQRIRERCLLQYFIPYLSVDLGSMANTFDTPLPRLEKEIAGLIVTNRMPARIDSQRKTLHRRQVDPREAGYKKVFSMGQEFLREMRAMLFRMSLLEHSVFVEA 454
DI+ YA+ Y+G TK+ RLLFIA C++R++ +AYR+A D + + N QLYR+V+ + GRLGP Y LD W E +++RA +KE+LE++L RT + KESIR+GY D G+F+YA G L +A KN+VRTRDYC+ ++H + MCLN I VS+ + F HV++YVSKAE DP KL+ AAGLA L Y AARKFL+ G + G ++ V+AP+DVATYGGLCALAS DR ELK +++N F+ L+LVP VRELI+DF S Y +CL L LK LLLD+HLH HVE LY +IR + L+QY P++SVDL MAN F T + LEKE+ LI N++ ARIDS K L+ R D R A +++V G EF R++RAML R +LL+H + A
Sbjct: 36 DIEAYASLYSGRTKITRLLFIADRCENRQMQMEAYRMAYDEIKKGE--NTQLYREVVQKIDGRLGPQYGLDLVWTESVERRADQRKEKLENELNAYRTNLIKESIRMGYNDFGDFYYAHGLLADAFKNYVRTRDYCTTSKHIIHMCLNAILVSIEMGQFTHVTSYVSKAEQTPEALDPVTVAKLRCAAGLAHLEAKKYKLAARKFLETGA---------ELGN-NYTEVIAPQDVATYGGLCALASFDRTELKNKVIDNLNFRNFLELVPEVRELIHDFYSSHYASCLDYLGNLKTNLLLDIHLHDHVEMLYNQIRHKALIQYTHPFVSVDLRMMANAFKTSVAGLEKELEALITDNQIQARIDSHNKILYARHADQRNATFQRVLQTGNEFDRDVRAMLLRANLLKHEYNLRA 437
BLAST of EWM28122.1 vs. NCBI_GenBank
Match: gi|719998787|ref|XP_010255512.1| (PREDICTED: COP9 signalosome complex subunit 1 [Nelumbo nucifera]) HSP 1 Score: 410.994 bits (1055), Expect = 4.040e-136 Identity = 204/414 (49.28%), Postives = 279/414 (67.39%), Query Frame = 0
Query: 43 DIDTYAARYAGYTKLRRLLFIAQHC--KSRELDAYRLALDALTQPRSLNIQLYRKVMGLVAGRLGPAYSLDATWAEEIDKRAAMQKERLESDLQTSRTGMAKESIRLGYQDLGEFHYARGDLDNALKNFVRTRDYCSIARHNVEMCLNVIKVSVGLDSFAHVSTYVSKAEHATGMNDPKVRHKLKAAAGLAQLSQHNYDSAARKFLDCGPSGLTRGTPQDPGPASFAHVLAPEDVATYGGLCALASLDRPELKRSLLENTTFKGLLDLVPMVRELIYDFCRSRYGACLGALAALKPELLLDVHLHRHVESLYQRIRERCLLQYFIPYLSVDLGSMANTFDTPLPRLEKEIAGLIVTNRMPARIDSQRKTLHRRQVDPREAGYKKVFSMGQEFLREMRAMLFRMSLLEHSVFVEA 454
D++ YA+ Y+G TK+ RLLFIA C +S +L+A R+A D + + N QL+R+V+ + GRLGPAY +D WA+ +D+RA +KE+LE++L + RT + KESIR+GY D G+F+YA G L +A KN+VRTRDYC+ ++H ++MCLN I VS+ + F HV++YVSKAE DP KL+ AAGLA L Y AARKFL+ GP + G ++ V+AP+DVATYGGLCALAS DR ELK +++N F+ L+LVP VRELI+DF S Y +CL L LK LLLD+HL+ HVE+LY +IR + L+QY P++SVDL MA+ F T + LEKE+ LI N++ ARIDS K L+ R D R A +++V G EF R++RAML R +LL+H + A
Sbjct: 35 DVEAYASLYSGRTKITRLLFIADQCGNQSMQLEALRMAYDEIKKGE--NTQLFREVVQKIDGRLGPAYRMDQAWADNVDRRAEQRKEKLENELNSYRTNLIKESIRMGYNDFGDFYYAHGALGDAFKNYVRTRDYCTTSKHIIQMCLNAILVSIEMGQFTHVNSYVSKAEQTPDALDPVTVAKLRCAAGLAHLDGKKYKLAARKFLETGP---------ELGN-NYTEVIAPQDVATYGGLCALASFDRTELKNKVIDNLNFRNFLELVPEVRELIHDFYSSHYASCLEYLENLKANLLLDIHLYDHVETLYNQIRHKALIQYTHPFVSVDLRMMASAFKTSVAGLEKELEALITDNQIQARIDSHNKILYARHADQRNATFQRVLQTGSEFDRDVRAMLLRANLLKHEYNLRA 436
BLAST of EWM28122.1 vs. NCBI_GenBank
Match: gi|1190982246|ref|XP_020880001.1| (COP9 signalosome complex subunit 1 [Arabidopsis lyrata subsp. lyrata]) HSP 1 Score: 410.994 bits (1055), Expect = 4.362e-136 Identity = 202/409 (49.39%), Postives = 276/409 (67.48%), Query Frame = 0
Query: 43 DIDTYAARYAGYTKLRRLLFIAQHC---KSRELDAYRLALDALTQPRSLNIQLYRKVMGLVAGRLGPAYSLDATWAEEIDKRAAMQKERLESDLQTSRTGMAKESIRLGYQDLGEFHYARGDLDNALKNFVRTRDYCSIARHNVEMCLNVIKVSVGLDSFAHVSTYVSKAEHATGMNDPKVRHKLKAAAGLAQLSQHNYDSAARKFLDCGPSGLTRGTPQDPGPASFAHVLAPEDVATYGGLCALASLDRPELKRSLLENTTFKGLLDLVPMVRELIYDFCRSRYGACLGALAALKPELLLDVHLHRHVESLYQRIRERCLLQYFIPYLSVDLGSMANTFDTPLPRLEKEIAGLIVTNRMPARIDSQRKTLHRRQVDPREAGYKKVFSMGQEFLREMRAMLFRMSLLEH 448
DI+ YAA Y G TK+ RLLFIA HC + +L+A R+A D + + N QL+R+V+ + GRLG Y +D++W E +D+RA +K +LE++L + RT + KESIR+GY D G+F+YA G L +A KN++RTRDYC+ +H + MC+N I VS+ + F HV++YV+KAE DP V KL+ A+GLA L Y AARKFLD P S+ V+AP+D+ATYGGLCALAS DR ELK+ +++N F+ L+LVP VRELI DF SRY +CL LA+LK LLLD+HLH HV++LY +IR++ L+QY +P++SVDL MA+ F T + LEKE+ LI N++ ARIDS K L+ R D R A ++KV MG EF R++RAML R +LL+H
Sbjct: 35 DIEAYAALYKGRTKIMRLLFIANHCGGNHAIQLEALRMAYDEIKKGE--NTQLFREVVNKIGGRLGDKYGMDSSWCEAVDRRAEQKKGKLENELSSYRTNLIKESIRMGYNDFGDFYYACGMLGDAFKNYIRTRDYCTTTKHIIHMCMNAILVSIEMGQFTHVTSYVNKAEQNPDPLDPIVIAKLRCASGLAHLELKKYKLAARKFLDVNPEL----------GNSYNEVIAPQDIATYGGLCALASFDRSELKQKVIDNINFRNFLELVPEVRELINDFYSSRYASCLEYLASLKANLLLDIHLHDHVDTLYDQIRKKALIQYTLPFVSVDLSRMADAFKTSVSGLEKELEALITDNQIQARIDSHNKILYARHADQRNATFQKVLQMGNEFDRDVRAMLLRANLLKH 431
BLAST of EWM28122.1 vs. NCBI_GenBank
Match: gi|1109195446|ref|XP_019189529.1| (PREDICTED: COP9 signalosome complex subunit 1-like [Ipomoea nil]) HSP 1 Score: 410.609 bits (1054), Expect = 6.190e-136 Identity = 208/419 (49.64%), Postives = 273/419 (65.16%), Query Frame = 0
Query: 43 DIDTYAARYAGYTKLRRLLFIAQHCK--SRELDAYRLALDALTQPRSLNIQLYRKVMGLVAGRLGPAYSLDATWAEEIDKRAAMQKERLESDLQTSRTGMAKESIRLGYQDLGEFHYARGDLDNALKNFVRTRDYCSIARHNVEMCLNVIKVSVGLDSFAHVSTYVSKAEHATGMNDPKVRHKLKAAAGLAQLSQHNYDSAARKFLDCGPSGLTRGTPQDPGPASFAHVLAPEDVATYGGLCALASLDRPELKRSLLENTTFKGLLDLVPMVRELIYDFCRSRYGACLGALAALKPELLLDVHLHRHVESLYQRIRERCLLQYFIPYLSVDLGSMANTFDTPLPRLEKEIAGLIVTNRMPARIDSQRKTLHRRQVDPREAGYKKVFSMGQEFLREMRAMLFRMSLLEHSVFVEAETRGG 459
DI+ Y A Y+G TK+ RLLFIA C S +L+A R+A D + + N QL+R+V+ + GRLGP Y DA W + +D+RA +KE+LE++L RT + KESIR+GY D G+F+YA G L A KN+VRTRDYC+ A+H + MCLN I VS+ + F HV++YVSKAE + DP KL+ AAGLA L Y AARKFL+ G QD G ++ V+AP+DVATYGGLCALAS DR ELK +++N F+ L+LVP VRELI DF S Y +CL L LK LLLD+HLH HVE+LY +IR + L+QY P++SVDL MAN F T + LEKE+ LI N++ ARIDS K L+ R D R A +++V G EF R++RAML R +LL+H + + G
Sbjct: 37 DIEAYDALYSGRTKIMRLLFIADRCNNTSMQLEALRMAYDEIKKGE--NTQLFREVVQKINGRLGPNYGPDAGWTDSVDRRAEQRKEKLENELNAYRTNLIKESIRMGYNDFGDFYYAHGQLGEAFKNYVRTRDYCTTAKHIIHMCLNAILVSIEMGQFTHVTSYVSKAEQSQDALDPITTAKLRCAAGLAHLEAKKYKLAARKFLEVG---------QDLGN-NYTEVIAPQDVATYGGLCALASFDRVELKSKVIDNINFRNFLELVPEVRELIQDFYTSHYASCLEYLGNLKANLLLDIHLHDHVETLYSQIRNKALIQYTHPFVSVDLNMMANAFKTTVTGLEKELESLITDNQIQARIDSHNKILYARHADQRNATFQRVLQTGGEFDRDVRAMLLRANLLKHEYNARSSRKHG 443 The following BLAST results are available for this feature:
BLAST of EWM28122.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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