EWM28136.1, cds2534 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28136.1 vs. NCBI_GenBank
Match: gi|585110480|gb|EWM28136.1| (Endonuclease/exonuclease/phosphatase [Nannochloropsis gaditana]) HSP 1 Score: 932.169 bits (2408), Expect = 0.000e+0 Identity = 452/452 (100.00%), Postives = 452/452 (100.00%), Query Frame = 0 Query: 1 MSKLKRIKLKSQDPVEIVKVRDTIDDRNNDDAEEEGTRQLLNGGVEGKEGDKTPPPDDCERQLLSSSKQVTELVLQTERDLLARNSLPEKSFKVLSWNVNGLNGILNGKAAQINGNKGSNVLQQLVQEEGNVDVIFLQETKLQDAKCAAFEDVLPGYVAHWSCSKTKKGYAGVAAFVHEKYVKRCISSYSDANKGSSRGKQATLASFFPTKGKETEPTKGAEGRIAAMKTAACKSASMASSCSIKDKEIEDGDSSVEALQVLSVRRGCDGEDDEDEEGRVLTLEFGSFWVVGVYVTNSGMKLERLEYRLKQWNPSFQAYLARLNAVKPALVVGDMNVAPEASDVYNAGAKHLAKVPGLTPEEREAHAAWLRTGWKDTFRALHPDARGAYTYWNVKTRARAENKGLRLDLAVIGAADMDGGRGVRVRDSFILHEATIGFSDHAPIGVVLDLGA 452 MSKLKRIKLKSQDPVEIVKVRDTIDDRNNDDAEEEGTRQLLNGGVEGKEGDKTPPPDDCERQLLSSSKQVTELVLQTERDLLARNSLPEKSFKVLSWNVNGLNGILNGKAAQINGNKGSNVLQQLVQEEGNVDVIFLQETKLQDAKCAAFEDVLPGYVAHWSCSKTKKGYAGVAAFVHEKYVKRCISSYSDANKGSSRGKQATLASFFPTKGKETEPTKGAEGRIAAMKTAACKSASMASSCSIKDKEIEDGDSSVEALQVLSVRRGCDGEDDEDEEGRVLTLEFGSFWVVGVYVTNSGMKLERLEYRLKQWNPSFQAYLARLNAVKPALVVGDMNVAPEASDVYNAGAKHLAKVPGLTPEEREAHAAWLRTGWKDTFRALHPDARGAYTYWNVKTRARAENKGLRLDLAVIGAADMDGGRGVRVRDSFILHEATIGFSDHAPIGVVLDLGA Sbjct: 1 MSKLKRIKLKSQDPVEIVKVRDTIDDRNNDDAEEEGTRQLLNGGVEGKEGDKTPPPDDCERQLLSSSKQVTELVLQTERDLLARNSLPEKSFKVLSWNVNGLNGILNGKAAQINGNKGSNVLQQLVQEEGNVDVIFLQETKLQDAKCAAFEDVLPGYVAHWSCSKTKKGYAGVAAFVHEKYVKRCISSYSDANKGSSRGKQATLASFFPTKGKETEPTKGAEGRIAAMKTAACKSASMASSCSIKDKEIEDGDSSVEALQVLSVRRGCDGEDDEDEEGRVLTLEFGSFWVVGVYVTNSGMKLERLEYRLKQWNPSFQAYLARLNAVKPALVVGDMNVAPEASDVYNAGAKHLAKVPGLTPEEREAHAAWLRTGWKDTFRALHPDARGAYTYWNVKTRARAENKGLRLDLAVIGAADMDGGRGVRVRDSFILHEATIGFSDHAPIGVVLDLGA 452
BLAST of EWM28136.1 vs. NCBI_GenBank
Match: gi|298708328|emb|CBJ48391.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 242.276 bits (617), Expect = 2.235e-71 Identity = 163/429 (38.00%), Postives = 224/429 (52.21%), Query Frame = 0 Query: 72 ELVLQTERDLLARNSLPEK--SFKVLSWNVNGLNGILNGKAAQINGNKGSNVLQQLVQEEGNVDVIFLQETKLQDAKCAAF--EDVLPGYVAHWSCSKTKKGYAGVAAFVHEKYVKRCISSYSDANKGSSRG------------------KQATLASFF-PTKGKETEPTKGAEGRIAAMKTAACKSASMASSCSIKDKEIEDGDSSVEALQVLSVRRGCDGEDDEDEEGRVLTLEFGSFWVVGVYVTNSGMKLERLEYRLKQWNPSFQAYLARLNAV-KPALVVGDMNVAPEASDVYNAGAKHLAKVPGLTPEEREAHAAWLRTG-WKDTFRALHPDARGAYTYWNVKTRARAENKGLRLDLAVIGAADMD---------------------------GGRGVRVRDSFILHEATIGFSDHAPIGVVL 448 EL + T+RD + R P +F VLSWNVNG+ + KG L+++V++E D++ LQETK+Q+ A +D+LPGY + WSCS+TK GY+G A F ++ SD KG G KQ +++FF P K++ E AA + S A+S + D + G S +VLSVR G G+ + EGR +T+E+ F+VV VYV NSG KL RL+YR K+W+ + +AY+ L A KP ++ GD+NVA D+YN GAKHL K T EER++ +W+ G D FR LHPDA GAYTYW+V+T AR N+GLRLD V A + G +G+ V D F+L EAT+G SDH PIG+ L Sbjct: 54 ELPIFTKRDPIDRVPFPSTGTTFTVLSWNVNGV---------RATAKKGLEPLRRMVEKE-MPDIVCLQETKIQEKDVEALRAQDILPGYASEWSCSRTKLGYSGTAVFFTKQ---------SDPWKGDGGGIDATGNGLPSDEPARKKLKQGKISTFFSPKPSKKSAKGSAPESETPTRAPAAEPATSAAASTNSAD-SLPGGRS---GFKVLSVRFGIGGDSKHNNEGRSITVEYEKFFVVTVYVPNSGEKLVRLDYRTKEWDVALKAYVESLEAQGKPVVLNGDLNVAHLDLDIYNRGAKHLPKNAATTKEERDSFDSWVNGGKVSDAFRRLHPDAEGAYTYWSVRTGARPVNRGLRLDYFVCSNAVFEDGAAGGGQAKATARRAKGSAPKGKGATGAKGMVVHDCFMLDEATVGVSDHCPIGITL 459
BLAST of EWM28136.1 vs. NCBI_GenBank
Match: gi|693500749|emb|CEF97122.1| (Exodeoxyribonuclease III xth [Ostreococcus tauri]) HSP 1 Score: 195.667 bits (496), Expect = 8.009e-55 Identity = 145/414 (35.02%), Postives = 199/414 (48.07%), Query Frame = 0 Query: 52 KTPPPDDCERQLLSSSKQVTELVLQTERDLLARNSLP--------EKSFKVLSWNVNGLNGILNGKAAQINGNKGSNVLQQLVQEEGNVDVIFLQETKLQDAKCAAF----EDVLPGY-VAHWSCSKTKKGYAGVAAFVHEKYVKRCISSYSDANKGSSRGKQATLASFFPTKGKETEPTKGAEGRIAAMKTAACKSASMASSCSIKDKEIEDGDSSVEALQVLSVRRGCDGEDDEDEEGRVLTLEFGSFWVVGVYVTNSGMKLERLEYRLKQWNPSFQAYLARLNAVKPALVVGDMNVAPEASDVYNAGAKHLAKVPGLTPEEREAHAAWL-RTGWKDTFRALHPDARGAYTYWNVKTRARAENKGLRLDLAVIGAADMDG-GRGVRVRDSFILHEATIGFSDHAPIGVVLDL 450 K P P + + S +K+ + QTE +ARN P ++FK +SWNV GL + A+ L+ LV+EE DVI LQE KLQ + AF +++ PGY ++ S KKGY+G+ A V R E KG + I AM A K A + DG + +S G G +EGR LT+E+ F+VV YV NSG L+RL+YR+K+W +A+L L+A KP + +GD+NVA +D++N A H+ K G TP+ER A L G D+FR H DA G ++YW+V+ R NKGLRLD AV DG GV V D+FIL + T SDHAP+G+ L + Sbjct: 9 KRPKPSETK---ASKTKEPAKRFEQTE---IARNVAPGAKTTRDGRETFKAISWNVAGLRSFVEKSGAK---------LRALVEEE-RPDVIILQEHKLQMSHIDAFGSKLKELCPGYDTTRFAVSTAKKGYSGIVA------VSR-------------------------------EGRKGGQVTIEAMLGGASKPA------------VSDG------FKAVSHSEGLQGGTAYVDEGRTLTIEYEKFYVVSAYVPNSGQDLKRLDYRIKEWERDMKAHLKALDAKKPVIYIGDLNVAHLDADIWNVTASHIKKSAGTTPQERGAFGVMLEENGLHDSFRFFHGDAAGWFSYWSVRAGNRPFNKGLRLDYAVASKRLFDGDDSGVEVVDAFILDQVT--GSDHAPVGITLAI 349
BLAST of EWM28136.1 vs. NCBI_GenBank
Match: gi|523540403|ref|XP_003078172.2| (ARP protein (ISS), partial [Ostreococcus tauri]) HSP 1 Score: 196.823 bits (499), Expect = 4.582e-54 Identity = 153/459 (33.33%), Postives = 215/459 (46.84%), Query Frame = 0 Query: 7 IKLKSQDPVEIVKVRDTIDDRNNDDAEEEGTRQLLNGGVEGKEGDKTPPPDDCERQLLSSSKQVTELVLQTERDLLARNSLP--------EKSFKVLSWNVNGLNGILNGKAAQINGNKGSNVLQQLVQEEGNVDVIFLQETKLQDAKCAAF----EDVLPGY-VAHWSCSKTKKGYAGVAAFVHEKYVKRCISSYSDANKGSSRGKQATLASFFPTKGKETEPTKGAEGRIAAMKTAACKSASMASSCSIKDKEIEDGDSSVEALQVLSVRRGCDGEDDEDEEGRVLTLEFGSFWVVGVYVTNSGMKLERLEYRLKQWNPSFQAYLARLNAVKPALVVGDMNVAPEASDVYNAGAKHLAKVPGLTPEEREAHAAWL-RTGWKDTFRALHPDARGAYTYWNVKTRARAENKGLRLDLAVIGAADMDG-GRGVRVRDSFILHEATIGFSDHAPIGVVLDL 450 + L+ D V+ R + R+ A E + +N + K P P + + S +K+ + QTE +ARN P ++FK +SWNV GL + A+ L+ LV+EE DVI LQE KLQ + AF +++ PGY ++ S KKGY+G+ A V R E KG + I AM A K A + DG + +S G G +EGR LT+E+ F+VV YV NSG L+RL+YR+K+W +A+L L+A KP + +GD+NVA +D++N A H+ K G TP+ER A L G D+FR H DA G ++YW+V+ R NKGLRLD AV DG GV V D+FIL + T SDHAP+G+ L + Sbjct: 82 VSLRIDDDVDANSARRRVAPRSMTSANEAKSSGEMNAD---EPEAKRPKPSETK---ASKTKEPAKRFEQTE---IARNVAPGAKTTRDGRETFKAISWNVAGLRSFVEKSGAK---------LRALVEEE-RPDVIILQEHKLQMSHIDAFGSKLKELCPGYDTTRFAVSTAKKGYSGIVA------VSR-------------------------------EGRKGGQVTIEAMLGGASKPA------------VSDG------FKAVSHSEGLQGGTAYVDEGRTLTIEYEKFYVVSAYVPNSGQDLKRLDYRIKEWERDMKAHLKALDAKKPVIYIGDLNVAHLDADIWNVTASHIKKSAGTTPQERGAFGVMLEENGLHDSFRFFHGDAAGWFSYWSVRAGNRPFNKGLRLDYAVASKRLFDGDDSGVEVVDAFILDQVT--GSDHAPVGITLAI 464
BLAST of EWM28136.1 vs. NCBI_GenBank
Match: gi|1199288728|gb|OUS43864.1| (ARP protein, partial [Ostreococcus tauri]) HSP 1 Score: 195.282 bits (495), Expect = 1.378e-53 Identity = 153/459 (33.33%), Postives = 214/459 (46.62%), Query Frame = 0 Query: 7 IKLKSQDPVEIVKVRDTIDDRNNDDAEEEGTRQLLNGGVEGKEGDKTPPPDDCERQLLSSSKQVTELVLQTERDLLARNSLP--------EKSFKVLSWNVNGLNGILNGKAAQINGNKGSNVLQQLVQEEGNVDVIFLQETKLQDAKCAAF----EDVLPGY-VAHWSCSKTKKGYAGVAAFVHEKYVKRCISSYSDANKGSSRGKQATLASFFPTKGKETEPTKGAEGRIAAMKTAACKSASMASSCSIKDKEIEDGDSSVEALQVLSVRRGCDGEDDEDEEGRVLTLEFGSFWVVGVYVTNSGMKLERLEYRLKQWNPSFQAYLARLNAVKPALVVGDMNVAPEASDVYNAGAKHLAKVPGLTPEEREAHAAWL-RTGWKDTFRALHPDARGAYTYWNVKTRARAENKGLRLDLAVIGAADMDG-GRGVRVRDSFILHEATIGFSDHAPIGVVLDL 450 + L+ D V+ R + R+ A E + +N + K P P + + S +K+ + QTE +ARN P + FK +SWNV GL + A+ L+ LV+EE DVI LQE KLQ + AF +++ PGY ++ S KKGY+G+ A V R E KG + I AM A K A + DG + +S G G +EGR LT+E+ F+VV YV NSG L+RL+YR+K+W +A+L L+A KP + +GD+NVA +D++N A H+ K G TP+ER A L G D+FR H DA G ++YW+V+ R NKGLRLD AV DG GV V D+FIL + T SDHAP+G+ L + Sbjct: 76 VSLRIDDDVDANSARRRVAPRSMTSANEAKSSGEMNAD---EPEAKRPKPSETK---ASKTKEPAKRFEQTE---IARNVAPGAKTTRDGREIFKAISWNVAGLRSFVEKSGAK---------LRALVEEE-RPDVIILQEHKLQMSHIDAFGSKLKELCPGYDTTRFAVSTAKKGYSGIVA------VSR-------------------------------EGRKGGQVTIEAMLGGASKPA------------VSDG------FKAVSHSEGLQGGTAYVDEGRTLTIEYEKFYVVSAYVPNSGQDLKRLDYRIKEWERDMKAHLKALDAKKPVIYIGDLNVAHLDADIWNVTASHIKKSAGTTPQERGAFGVMLEENGLHDSFRFFHGDAAGWFSYWSVRAGNRPFNKGLRLDYAVASKRLFDGDDSGVEVVDAFILDQVT--GSDHAPVGITLAI 458
BLAST of EWM28136.1 vs. NCBI_GenBank
Match: gi|929762665|ref|XP_014156313.1| (hypothetical protein SARC_05307 [Sphaeroforma arctica JP610] >gi|906953039|gb|KNC82411.1| hypothetical protein SARC_05307 [Sphaeroforma arctica JP610]) HSP 1 Score: 193.741 bits (491), Expect = 2.318e-52 Identity = 141/429 (32.87%), Postives = 200/429 (46.62%), Query Frame = 0 Query: 76 QTERDLLARNSL-------PEKSFKVLSWNVNGLNGILNGKAAQINGNKGSNVLQQLVQEEGNVDVIFLQETKLQDAKC----AAFEDVLPGYVAHWSCSKTKKGYAGVAAFVHEKYVKRCISS---YSDANKGSS----------RGKQATLASFFPTKGKETEPTKGAEGRIAAMKTAACKSASMASSCSIKDKEIEDGDSSVEALQVLSVRRGCDGEDDEDEEGRVLTLEFGSFWVVGVYVTNSGMKLERLEYRLKQWNPSFQAYLARLNAVKPALVVGDMNVAPEASDVYNAGAKHLAKVPGLTPEEREAHAAWLRTG-WKDTFRALHPDARGAYTYWNVKTRARAENKGLRLDLAVIGAADMDG-----------------------------GRGVRVRDSFILHEATIGFSDHAPIGVVLDL 450 Q ER + R + E++F ++WNV GL +L +I ++LV E D + +QE KLQ A E +PGY +HW S KKGY+GVA F+ KY R S +DA G + +GKQA+L F K K+ E +E ++ KT + M + ++ +IE G DE GRV+T+E+ F++VG YV NSG L RLEYR+ WN S AY+ L KP ++ GD+NVA DVYN AKH+ K G TP+ER A + L G DTFR HPDARGA++YW+++ R N+G+RLD V +D +G ++ D++I E SDH P+G+ + + Sbjct: 129 QAERPMFERTPMTRKYKAGSEQAFVAVAWNVAGLRAVLR-TPQRIES------FRRLVDVE-KPDYLLIQEHKLQGKDVEEIETALEPYIPGYESHWVSSTGKKGYSGVAVFL--KYPVRNTPSDKQVADAGDGKNCANAKPNKEKKGKQASLKDMFGIK-KDVEQELVSE--TSSTKTMKNSDSQMYRAINVTMPKIE-------------------GASDE---GRVITVEYPHFYMVGAYVPNSGQNLARLEYRIGGWNKSLNAYMKELEKTKPVILGGDLNVAHTDQDVYNPEAKHIPKSAGTTPQERRAFSELLSDGEMVDTFRHYHPDARGAFSYWSMRVNNRVVNRGMRLDYFVASKILVDNTAKSSETTDQSTDATEKPALASKNATPYKTQGAQILDAWISPE--YNGSDHCPVGIAIAI 520
BLAST of EWM28136.1 vs. NCBI_GenBank
Match: gi|551675602|ref|XP_005840555.1| (apurinic/apyrimidinic endonuclease family member in base excision repair [Guillardia theta CCMP2712] >gi|428184721|gb|EKX53575.1| apurinic/apyrimidinic endonuclease family member in base excision repair [Guillardia theta CCMP2712]) HSP 1 Score: 191.815 bits (486), Expect = 2.451e-52 Identity = 143/436 (32.80%), Postives = 218/436 (50.00%), Query Frame = 0 Query: 22 DTIDDRNNDDAEEEGTRQLLNGGVEGKEGDKTPPPDDCERQLLSSSKQVTELVLQTERDLLARNSLPEKSFKVLSWNVNGLNGILNGKAAQINGNKGSNVLQQLVQEEGNVDVIFLQETKLQDAKCAAFEDVLP-------GYVAHWSCSKTKKGYAGVAAFVHEKYVKRCISSYSDANKGSSRGKQATLASFFPTKGKETEPTKGAEGRIAAMKTAACKSASMASSCSIKDKEIEDGDSSVEALQVLSVRRGCDGEDDEDEEGRVLTLEFGSFWVVGVYVTNSGMKLERLEYRLKQWNPSFQAYLARLNAV-KPALVVGDMNVAPEASDVYNAGAKHLAKVPGLTPEEREAHAAWLRTGWKDTFRALH-PDARGAYTYWNVKTRARAENKGLRLDLAVIGAADMDGGRGVRVRDSFILHEATIGFSDHAPIGVVL 448 DT D++ + E+ T++ + E DK P + Q + ++V + + E+ + LP K +K++SWNV + ++ K +L++L+++E D+I QETKL+ + +E++L GY AH+S S + K YAG V S +K +++ KQ + SFF KGK+++ K E AC + S K+ DG+ + E +Q EGR +T+EF SF+VV YV NSG KL+RLE+R K W+ YL +L A KP + GD+NVA +D++N GAKHL K G TPEER++ + L G+ D FR LH DA+G ++YW+V+ R N+GLRLD V + RV D+ I H+ + DHA I + L Sbjct: 63 DTQDEKKQAEPEK-VTKKRGKKETDTAESDK-PKKKAKDEQETNKKEKVVQEKVAIEKSDIKHAELPSKRYKIVSWNVTTIRSLMK---------KNPELLKKLMEQE-QPDLICFQETKLKQEEHDEYEEMLKSQFPGDQGYEAHFSSSLSNKSYAGTLVLVR-----------SSKDKATAQ-KQTKMDSFF--KGKDSKSAKKDE-------ETACPPLKVTFGLSTLSKD--DGEIAAEVIQ----------------EGRTITVEFESFFVVATYVPNSGEKLQRLEFRTKLWDRKVVEYLKKLEASGKPVIWCGDLNVAHLDNDIWNVGAKHLVKSAGTTPEERDSFSKILEEGYVDCFRHLHGEDAKGWFSYWSVRAGNRPWNRGLRLDYFVASKSLCSQDSLPRVVDADI-HDEFVAI-DHAAISLTL 445
BLAST of EWM28136.1 vs. NCBI_GenBank
Match: gi|219122782|ref|XP_002181718.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217406994|gb|EEC46932.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 188.348 bits (477), Expect = 1.105e-50 Identity = 142/414 (34.30%), Postives = 203/414 (49.03%), Query Frame = 0 Query: 56 PDDCERQLLSSSKQVTELVLQTERDLLARNSLPEK-------SFKVLSWNVNGLNGILNGKAAQINGNKGSNVLQQLVQEEGNVDVIFLQETKLQ-----DAKCAAFEDVLP--GYVAHWSCSKTKKGYAGVAAFVHEKYVKRCISSYSDANKGSSRGK-QATLASFFPTKGKETEPTKGAEGRIAAMKTAACKSASMASSCSIKDKEIEDGDSSVEALQVLSVRRGCDGEDDEDEEGRVLTLEFGSFWVVGVYVTNSGMKLERLEYRLKQWNPSFQAYLARLNAVK--PALVVGDMNVAPEASDVYNAGAKHLAKVPGLTPEEREAHAAWLRTGWKDTFRALHPDARGAYTYWNVKTRARAENKGLRLDLAVIGAADMDGGRGVRVRDSFILHEATIGFSDHAPIGVVLDLGA 452 P+D ++ K T VL TERD + R E+ + ++ SWNV GL ++ + L V+E NVDV+ LQETKLQ D K +L G+ +++SCS +KGY+G + FV + + KGS K Q TL S+F GK E SS S+K E D + + +S + D D EGR++ ++F SF + VYV NSG KLERL YR ++W+ F +++ + + P L +GD+NVA +V+N GAKHLAK G+T EER + A L G+ D FR LHP A+G Y+YW+ + R NKGLRLD + + D VRDS++L SDH P+ + L++ A Sbjct: 125 PEDTTKENSPKKKAPTHQVL-TERDDIPRLWSDEQAAKNGSYTMRIASWNVAGLRALMRN---------SPHALSDFVREH-NVDVLCLQETKLQESHLDDPKLKIRGHLLEKEGFDSYYSCSTARKGYSGTSVFVKRRQLI----------KGSKVAKKQKTLGSYF---GKNDE--------------------RETSSNSLKGTEELSIDPHLLVPEGVSFQMNVD---KHDSEGRIVVVDFPSFTMCNVYVPNSGQKLERLSYRTEEWDKDFLSFIQKKQKDRGVPVLWLGDLNVAHTNLEVWNDGAKHLAKQAGVTAEERASFEAQLNAGFIDAFRRLHPTAKGHYSYWSQRAGNREPNKGLRLDYFICDPSLFDEESKTIVRDSYVL--PLQQGSDHCPVVLELEIKA 489
BLAST of EWM28136.1 vs. NCBI_GenBank
Match: gi|167521904|ref|XP_001745290.1| (hypothetical protein, partial [Monosiga brevicollis MX1] >gi|163776248|gb|EDQ89868.1| predicted protein, partial [Monosiga brevicollis MX1]) HSP 1 Score: 169.474 bits (428), Expect = 5.632e-46 Identity = 90/197 (45.69%), Postives = 119/197 (60.41%), Query Frame = 0 Query: 252 GDSSVEALQVLSVRRGCDGEDDEDEEGRVLTLEFGSFWVVGVYVTNSGMKLERLEYRLKQWNPSFQAYLARLNAVKPALVVGDMNVAPEASDVYNAGAKHLAKVPGLTPEEREAHAAWLRTGWKDTFRALHPDARGAYTYWNVKTRARAENKGLRLDLAVIGAADMDGGRGVRVRDSFILHEATIGFSDHAPIGVVL 448 G + + LSV+ G D+EGR +T+E +V+GVYV NSG L+RL+YRL +WN F AY+ L A KP LVVGD+NVA D+YNAG HL K G TP+ER A +L G+ DTFR L+P+ GA+TYW+ +T R ++KGLRLD AV A ++ +R DS + SDH PI +VL Sbjct: 74 GATPTSDFRALSVQYGIKSAH-HDQEGRTITVELPDLFVIGVYVPNSGQDLKRLDYRLNEWNVDFLAYIRELEASKPVLVVGDLNVAHLDLDIYNAG--HLVKSAGCTPQERTAFTEFLDQGFTDTFRKLYPEHTGAFTYWSARTGGRQDSKGLRLDYAVCSNALLEANSPLRCLDSVM-------GSDHCPIAIVL 260 HSP 2 Score: 75.485 bits (184), Expect = 9.879e-12 Identity = 39/83 (46.99%), Postives = 49/83 (59.04%), Query Frame = 0 Query: 92 FKVLSWNVNGLNGILNGKAAQINGNKGSNVLQQLVQEEGNVDVIFLQETKLQDAKCAAFEDVLPGYVAHWSCSKTKKGYAGVA 174 V+SWNVNGL +L L LVQ E N D++FLQETKLQ + A + ++LPGY WSCS+ KKGY+G A Sbjct: 1 LHVVSWNVNGLRAVLKNH---------PKALPDLVQAE-NPDLLFLQETKLQASHVADYANLLPGYTGLWSCSRAKKGYSGTA 73
BLAST of EWM28136.1 vs. NCBI_GenBank
Match: gi|255075203|ref|XP_002501276.1| (predicted protein [Micromonas commoda] >gi|226516540|gb|ACO62534.1| predicted protein [Micromonas commoda]) HSP 1 Score: 169.859 bits (429), Expect = 4.887e-45 Identity = 94/185 (50.81%), Postives = 116/185 (62.70%), Query Frame = 0 Query: 276 EEGRVLTLEFGSFWVVGVYVTNSGMKLERLEYRLKQWNPSFQAYLARLNAV---KPALVVGDMNVAPEASDVYNAGAKHLAKVPGLTPEEREAHAAWLRT----GWKDTFRALHPDARGAYTYWNVKTRARAENKGLRLDLAVIGAADMDGGR---GVRVRDSFILHEATIGFSDHAPIGVVLDL 450 +EGRVLTLEF +F +V YV NSG KLERLEYRLK+W+ F+AYLA L+ KP +V GD+NV D+YN A H K GLTPEER ++W RT DTFRA HP+ARG Y+YW+ + + N+GLRLD M GR GVRV DSF+L + SDHAP+G+ L L Sbjct: 171 DEGRVLTLEFDAFTMVFTYVPNSGQKLERLEYRLKKWDVDFRAYLAHLDGETRGKPVIVGGDLNVGHLDEDIYNVDAPHTKKQCGLTPEER---SSWTRTLESVKLVDTFRAFHPNARGWYSYWSGRAGNKPRNRGLRLDYFAASERIMSSGRDGGGVRVVDSFVLDKLVAEASDHAPVGITLAL 352 The following BLAST results are available for this feature:
BLAST of EWM28136.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|