EWM28136.1, cds2534 (CDS) Nannochloropsis gaditana

Overview
NameEWM28136.1
Unique Namecds2534
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002459.1:619763..621121 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM28136.1
ProductEndonuclease/exonuclease/phosphatase
Orig transcript idgnl|cribi|Naga_100036g43.2556.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:619763..621121 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0006950response to stress
GO:0006259DNA metabolic process
GO:0006281DNA repair
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
GO:0004518nuclease activity
Vocabulary: INTERPRO
TermDefinition
IPR005135Endo/exonuclease/phosphatase
IPR004808AP_endonuc_1
Homology
BLAST of EWM28136.1 vs. NCBI_GenBank
Match: gi|585110480|gb|EWM28136.1| (Endonuclease/exonuclease/phosphatase [Nannochloropsis gaditana])

HSP 1 Score: 932.169 bits (2408), Expect = 0.000e+0
Identity = 452/452 (100.00%), Postives = 452/452 (100.00%), Query Frame = 0
Query:    1 MSKLKRIKLKSQDPVEIVKVRDTIDDRNNDDAEEEGTRQLLNGGVEGKEGDKTPPPDDCERQLLSSSKQVTELVLQTERDLLARNSLPEKSFKVLSWNVNGLNGILNGKAAQINGNKGSNVLQQLVQEEGNVDVIFLQETKLQDAKCAAFEDVLPGYVAHWSCSKTKKGYAGVAAFVHEKYVKRCISSYSDANKGSSRGKQATLASFFPTKGKETEPTKGAEGRIAAMKTAACKSASMASSCSIKDKEIEDGDSSVEALQVLSVRRGCDGEDDEDEEGRVLTLEFGSFWVVGVYVTNSGMKLERLEYRLKQWNPSFQAYLARLNAVKPALVVGDMNVAPEASDVYNAGAKHLAKVPGLTPEEREAHAAWLRTGWKDTFRALHPDARGAYTYWNVKTRARAENKGLRLDLAVIGAADMDGGRGVRVRDSFILHEATIGFSDHAPIGVVLDLGA 452
            MSKLKRIKLKSQDPVEIVKVRDTIDDRNNDDAEEEGTRQLLNGGVEGKEGDKTPPPDDCERQLLSSSKQVTELVLQTERDLLARNSLPEKSFKVLSWNVNGLNGILNGKAAQINGNKGSNVLQQLVQEEGNVDVIFLQETKLQDAKCAAFEDVLPGYVAHWSCSKTKKGYAGVAAFVHEKYVKRCISSYSDANKGSSRGKQATLASFFPTKGKETEPTKGAEGRIAAMKTAACKSASMASSCSIKDKEIEDGDSSVEALQVLSVRRGCDGEDDEDEEGRVLTLEFGSFWVVGVYVTNSGMKLERLEYRLKQWNPSFQAYLARLNAVKPALVVGDMNVAPEASDVYNAGAKHLAKVPGLTPEEREAHAAWLRTGWKDTFRALHPDARGAYTYWNVKTRARAENKGLRLDLAVIGAADMDGGRGVRVRDSFILHEATIGFSDHAPIGVVLDLGA
Sbjct:    1 MSKLKRIKLKSQDPVEIVKVRDTIDDRNNDDAEEEGTRQLLNGGVEGKEGDKTPPPDDCERQLLSSSKQVTELVLQTERDLLARNSLPEKSFKVLSWNVNGLNGILNGKAAQINGNKGSNVLQQLVQEEGNVDVIFLQETKLQDAKCAAFEDVLPGYVAHWSCSKTKKGYAGVAAFVHEKYVKRCISSYSDANKGSSRGKQATLASFFPTKGKETEPTKGAEGRIAAMKTAACKSASMASSCSIKDKEIEDGDSSVEALQVLSVRRGCDGEDDEDEEGRVLTLEFGSFWVVGVYVTNSGMKLERLEYRLKQWNPSFQAYLARLNAVKPALVVGDMNVAPEASDVYNAGAKHLAKVPGLTPEEREAHAAWLRTGWKDTFRALHPDARGAYTYWNVKTRARAENKGLRLDLAVIGAADMDGGRGVRVRDSFILHEATIGFSDHAPIGVVLDLGA 452          
BLAST of EWM28136.1 vs. NCBI_GenBank
Match: gi|298708328|emb|CBJ48391.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 242.276 bits (617), Expect = 2.235e-71
Identity = 163/429 (38.00%), Postives = 224/429 (52.21%), Query Frame = 0
Query:   72 ELVLQTERDLLARNSLPEK--SFKVLSWNVNGLNGILNGKAAQINGNKGSNVLQQLVQEEGNVDVIFLQETKLQDAKCAAF--EDVLPGYVAHWSCSKTKKGYAGVAAFVHEKYVKRCISSYSDANKGSSRG------------------KQATLASFF-PTKGKETEPTKGAEGRIAAMKTAACKSASMASSCSIKDKEIEDGDSSVEALQVLSVRRGCDGEDDEDEEGRVLTLEFGSFWVVGVYVTNSGMKLERLEYRLKQWNPSFQAYLARLNAV-KPALVVGDMNVAPEASDVYNAGAKHLAKVPGLTPEEREAHAAWLRTG-WKDTFRALHPDARGAYTYWNVKTRARAENKGLRLDLAVIGAADMD---------------------------GGRGVRVRDSFILHEATIGFSDHAPIGVVL 448
            EL + T+RD + R   P    +F VLSWNVNG+         +    KG   L+++V++E   D++ LQETK+Q+    A   +D+LPGY + WSCS+TK GY+G A F  ++         SD  KG   G                  KQ  +++FF P   K++      E        AA  + S A+S +  D  +  G S     +VLSVR G  G+   + EGR +T+E+  F+VV VYV NSG KL RL+YR K+W+ + +AY+  L A  KP ++ GD+NVA    D+YN GAKHL K    T EER++  +W+  G   D FR LHPDA GAYTYW+V+T AR  N+GLRLD  V   A  +                           G +G+ V D F+L EAT+G SDH PIG+ L
Sbjct:   54 ELPIFTKRDPIDRVPFPSTGTTFTVLSWNVNGV---------RATAKKGLEPLRRMVEKE-MPDIVCLQETKIQEKDVEALRAQDILPGYASEWSCSRTKLGYSGTAVFFTKQ---------SDPWKGDGGGIDATGNGLPSDEPARKKLKQGKISTFFSPKPSKKSAKGSAPESETPTRAPAAEPATSAAASTNSAD-SLPGGRS---GFKVLSVRFGIGGDSKHNNEGRSITVEYEKFFVVTVYVPNSGEKLVRLDYRTKEWDVALKAYVESLEAQGKPVVLNGDLNVAHLDLDIYNRGAKHLPKNAATTKEERDSFDSWVNGGKVSDAFRRLHPDAEGAYTYWSVRTGARPVNRGLRLDYFVCSNAVFEDGAAGGGQAKATARRAKGSAPKGKGATGAKGMVVHDCFMLDEATVGVSDHCPIGITL 459          
BLAST of EWM28136.1 vs. NCBI_GenBank
Match: gi|693500749|emb|CEF97122.1| (Exodeoxyribonuclease III xth [Ostreococcus tauri])

HSP 1 Score: 195.667 bits (496), Expect = 8.009e-55
Identity = 145/414 (35.02%), Postives = 199/414 (48.07%), Query Frame = 0
Query:   52 KTPPPDDCERQLLSSSKQVTELVLQTERDLLARNSLP--------EKSFKVLSWNVNGLNGILNGKAAQINGNKGSNVLQQLVQEEGNVDVIFLQETKLQDAKCAAF----EDVLPGY-VAHWSCSKTKKGYAGVAAFVHEKYVKRCISSYSDANKGSSRGKQATLASFFPTKGKETEPTKGAEGRIAAMKTAACKSASMASSCSIKDKEIEDGDSSVEALQVLSVRRGCDGEDDEDEEGRVLTLEFGSFWVVGVYVTNSGMKLERLEYRLKQWNPSFQAYLARLNAVKPALVVGDMNVAPEASDVYNAGAKHLAKVPGLTPEEREAHAAWL-RTGWKDTFRALHPDARGAYTYWNVKTRARAENKGLRLDLAVIGAADMDG-GRGVRVRDSFILHEATIGFSDHAPIGVVLDL 450
            K P P + +    S +K+  +   QTE   +ARN  P         ++FK +SWNV GL   +    A+         L+ LV+EE   DVI LQE KLQ +   AF    +++ PGY    ++ S  KKGY+G+ A      V R                               E  KG +  I AM   A K A            + DG       + +S   G  G     +EGR LT+E+  F+VV  YV NSG  L+RL+YR+K+W    +A+L  L+A KP + +GD+NVA   +D++N  A H+ K  G TP+ER A    L   G  D+FR  H DA G ++YW+V+   R  NKGLRLD AV      DG   GV V D+FIL + T   SDHAP+G+ L +
Sbjct:    9 KRPKPSETK---ASKTKEPAKRFEQTE---IARNVAPGAKTTRDGRETFKAISWNVAGLRSFVEKSGAK---------LRALVEEE-RPDVIILQEHKLQMSHIDAFGSKLKELCPGYDTTRFAVSTAKKGYSGIVA------VSR-------------------------------EGRKGGQVTIEAMLGGASKPA------------VSDG------FKAVSHSEGLQGGTAYVDEGRTLTIEYEKFYVVSAYVPNSGQDLKRLDYRIKEWERDMKAHLKALDAKKPVIYIGDLNVAHLDADIWNVTASHIKKSAGTTPQERGAFGVMLEENGLHDSFRFFHGDAAGWFSYWSVRAGNRPFNKGLRLDYAVASKRLFDGDDSGVEVVDAFILDQVT--GSDHAPVGITLAI 349          
BLAST of EWM28136.1 vs. NCBI_GenBank
Match: gi|523540403|ref|XP_003078172.2| (ARP protein (ISS), partial [Ostreococcus tauri])

HSP 1 Score: 196.823 bits (499), Expect = 4.582e-54
Identity = 153/459 (33.33%), Postives = 215/459 (46.84%), Query Frame = 0
Query:    7 IKLKSQDPVEIVKVRDTIDDRNNDDAEEEGTRQLLNGGVEGKEGDKTPPPDDCERQLLSSSKQVTELVLQTERDLLARNSLP--------EKSFKVLSWNVNGLNGILNGKAAQINGNKGSNVLQQLVQEEGNVDVIFLQETKLQDAKCAAF----EDVLPGY-VAHWSCSKTKKGYAGVAAFVHEKYVKRCISSYSDANKGSSRGKQATLASFFPTKGKETEPTKGAEGRIAAMKTAACKSASMASSCSIKDKEIEDGDSSVEALQVLSVRRGCDGEDDEDEEGRVLTLEFGSFWVVGVYVTNSGMKLERLEYRLKQWNPSFQAYLARLNAVKPALVVGDMNVAPEASDVYNAGAKHLAKVPGLTPEEREAHAAWL-RTGWKDTFRALHPDARGAYTYWNVKTRARAENKGLRLDLAVIGAADMDG-GRGVRVRDSFILHEATIGFSDHAPIGVVLDL 450
            + L+  D V+    R  +  R+   A E  +   +N     +   K P P + +    S +K+  +   QTE   +ARN  P         ++FK +SWNV GL   +    A+         L+ LV+EE   DVI LQE KLQ +   AF    +++ PGY    ++ S  KKGY+G+ A      V R                               E  KG +  I AM   A K A            + DG       + +S   G  G     +EGR LT+E+  F+VV  YV NSG  L+RL+YR+K+W    +A+L  L+A KP + +GD+NVA   +D++N  A H+ K  G TP+ER A    L   G  D+FR  H DA G ++YW+V+   R  NKGLRLD AV      DG   GV V D+FIL + T   SDHAP+G+ L +
Sbjct:   82 VSLRIDDDVDANSARRRVAPRSMTSANEAKSSGEMNAD---EPEAKRPKPSETK---ASKTKEPAKRFEQTE---IARNVAPGAKTTRDGRETFKAISWNVAGLRSFVEKSGAK---------LRALVEEE-RPDVIILQEHKLQMSHIDAFGSKLKELCPGYDTTRFAVSTAKKGYSGIVA------VSR-------------------------------EGRKGGQVTIEAMLGGASKPA------------VSDG------FKAVSHSEGLQGGTAYVDEGRTLTIEYEKFYVVSAYVPNSGQDLKRLDYRIKEWERDMKAHLKALDAKKPVIYIGDLNVAHLDADIWNVTASHIKKSAGTTPQERGAFGVMLEENGLHDSFRFFHGDAAGWFSYWSVRAGNRPFNKGLRLDYAVASKRLFDGDDSGVEVVDAFILDQVT--GSDHAPVGITLAI 464          
BLAST of EWM28136.1 vs. NCBI_GenBank
Match: gi|1199288728|gb|OUS43864.1| (ARP protein, partial [Ostreococcus tauri])

HSP 1 Score: 195.282 bits (495), Expect = 1.378e-53
Identity = 153/459 (33.33%), Postives = 214/459 (46.62%), Query Frame = 0
Query:    7 IKLKSQDPVEIVKVRDTIDDRNNDDAEEEGTRQLLNGGVEGKEGDKTPPPDDCERQLLSSSKQVTELVLQTERDLLARNSLP--------EKSFKVLSWNVNGLNGILNGKAAQINGNKGSNVLQQLVQEEGNVDVIFLQETKLQDAKCAAF----EDVLPGY-VAHWSCSKTKKGYAGVAAFVHEKYVKRCISSYSDANKGSSRGKQATLASFFPTKGKETEPTKGAEGRIAAMKTAACKSASMASSCSIKDKEIEDGDSSVEALQVLSVRRGCDGEDDEDEEGRVLTLEFGSFWVVGVYVTNSGMKLERLEYRLKQWNPSFQAYLARLNAVKPALVVGDMNVAPEASDVYNAGAKHLAKVPGLTPEEREAHAAWL-RTGWKDTFRALHPDARGAYTYWNVKTRARAENKGLRLDLAVIGAADMDG-GRGVRVRDSFILHEATIGFSDHAPIGVVLDL 450
            + L+  D V+    R  +  R+   A E  +   +N     +   K P P + +    S +K+  +   QTE   +ARN  P         + FK +SWNV GL   +    A+         L+ LV+EE   DVI LQE KLQ +   AF    +++ PGY    ++ S  KKGY+G+ A      V R                               E  KG +  I AM   A K A            + DG       + +S   G  G     +EGR LT+E+  F+VV  YV NSG  L+RL+YR+K+W    +A+L  L+A KP + +GD+NVA   +D++N  A H+ K  G TP+ER A    L   G  D+FR  H DA G ++YW+V+   R  NKGLRLD AV      DG   GV V D+FIL + T   SDHAP+G+ L +
Sbjct:   76 VSLRIDDDVDANSARRRVAPRSMTSANEAKSSGEMNAD---EPEAKRPKPSETK---ASKTKEPAKRFEQTE---IARNVAPGAKTTRDGREIFKAISWNVAGLRSFVEKSGAK---------LRALVEEE-RPDVIILQEHKLQMSHIDAFGSKLKELCPGYDTTRFAVSTAKKGYSGIVA------VSR-------------------------------EGRKGGQVTIEAMLGGASKPA------------VSDG------FKAVSHSEGLQGGTAYVDEGRTLTIEYEKFYVVSAYVPNSGQDLKRLDYRIKEWERDMKAHLKALDAKKPVIYIGDLNVAHLDADIWNVTASHIKKSAGTTPQERGAFGVMLEENGLHDSFRFFHGDAAGWFSYWSVRAGNRPFNKGLRLDYAVASKRLFDGDDSGVEVVDAFILDQVT--GSDHAPVGITLAI 458          
BLAST of EWM28136.1 vs. NCBI_GenBank
Match: gi|929762665|ref|XP_014156313.1| (hypothetical protein SARC_05307 [Sphaeroforma arctica JP610] >gi|906953039|gb|KNC82411.1| hypothetical protein SARC_05307 [Sphaeroforma arctica JP610])

HSP 1 Score: 193.741 bits (491), Expect = 2.318e-52
Identity = 141/429 (32.87%), Postives = 200/429 (46.62%), Query Frame = 0
Query:   76 QTERDLLARNSL-------PEKSFKVLSWNVNGLNGILNGKAAQINGNKGSNVLQQLVQEEGNVDVIFLQETKLQDAKC----AAFEDVLPGYVAHWSCSKTKKGYAGVAAFVHEKYVKRCISS---YSDANKGSS----------RGKQATLASFFPTKGKETEPTKGAEGRIAAMKTAACKSASMASSCSIKDKEIEDGDSSVEALQVLSVRRGCDGEDDEDEEGRVLTLEFGSFWVVGVYVTNSGMKLERLEYRLKQWNPSFQAYLARLNAVKPALVVGDMNVAPEASDVYNAGAKHLAKVPGLTPEEREAHAAWLRTG-WKDTFRALHPDARGAYTYWNVKTRARAENKGLRLDLAVIGAADMDG-----------------------------GRGVRVRDSFILHEATIGFSDHAPIGVVLDL 450
            Q ER +  R  +        E++F  ++WNV GL  +L     +I         ++LV  E   D + +QE KLQ         A E  +PGY +HW  S  KKGY+GVA F+  KY  R   S    +DA  G +          +GKQA+L   F  K K+ E    +E   ++ KT     + M  + ++   +IE                   G  DE   GRV+T+E+  F++VG YV NSG  L RLEYR+  WN S  AY+  L   KP ++ GD+NVA    DVYN  AKH+ K  G TP+ER A +  L  G   DTFR  HPDARGA++YW+++   R  N+G+RLD  V     +D                               +G ++ D++I  E     SDH P+G+ + +
Sbjct:  129 QAERPMFERTPMTRKYKAGSEQAFVAVAWNVAGLRAVLR-TPQRIES------FRRLVDVE-KPDYLLIQEHKLQGKDVEEIETALEPYIPGYESHWVSSTGKKGYSGVAVFL--KYPVRNTPSDKQVADAGDGKNCANAKPNKEKKGKQASLKDMFGIK-KDVEQELVSE--TSSTKTMKNSDSQMYRAINVTMPKIE-------------------GASDE---GRVITVEYPHFYMVGAYVPNSGQNLARLEYRIGGWNKSLNAYMKELEKTKPVILGGDLNVAHTDQDVYNPEAKHIPKSAGTTPQERRAFSELLSDGEMVDTFRHYHPDARGAFSYWSMRVNNRVVNRGMRLDYFVASKILVDNTAKSSETTDQSTDATEKPALASKNATPYKTQGAQILDAWISPE--YNGSDHCPVGIAIAI 520          
BLAST of EWM28136.1 vs. NCBI_GenBank
Match: gi|551675602|ref|XP_005840555.1| (apurinic/apyrimidinic endonuclease family member in base excision repair [Guillardia theta CCMP2712] >gi|428184721|gb|EKX53575.1| apurinic/apyrimidinic endonuclease family member in base excision repair [Guillardia theta CCMP2712])

HSP 1 Score: 191.815 bits (486), Expect = 2.451e-52
Identity = 143/436 (32.80%), Postives = 218/436 (50.00%), Query Frame = 0
Query:   22 DTIDDRNNDDAEEEGTRQLLNGGVEGKEGDKTPPPDDCERQLLSSSKQVTELVLQTERDLLARNSLPEKSFKVLSWNVNGLNGILNGKAAQINGNKGSNVLQQLVQEEGNVDVIFLQETKLQDAKCAAFEDVLP-------GYVAHWSCSKTKKGYAGVAAFVHEKYVKRCISSYSDANKGSSRGKQATLASFFPTKGKETEPTKGAEGRIAAMKTAACKSASMASSCSIKDKEIEDGDSSVEALQVLSVRRGCDGEDDEDEEGRVLTLEFGSFWVVGVYVTNSGMKLERLEYRLKQWNPSFQAYLARLNAV-KPALVVGDMNVAPEASDVYNAGAKHLAKVPGLTPEEREAHAAWLRTGWKDTFRALH-PDARGAYTYWNVKTRARAENKGLRLDLAVIGAADMDGGRGVRVRDSFILHEATIGFSDHAPIGVVL 448
            DT D++   + E+  T++      +  E DK P     + Q  +  ++V +  +  E+  +    LP K +K++SWNV  +  ++          K   +L++L+++E   D+I  QETKL+  +   +E++L        GY AH+S S + K YAG    V            S  +K +++ KQ  + SFF  KGK+++  K  E         AC    +    S   K+  DG+ + E +Q                EGR +T+EF SF+VV  YV NSG KL+RLE+R K W+     YL +L A  KP +  GD+NVA   +D++N GAKHL K  G TPEER++ +  L  G+ D FR LH  DA+G ++YW+V+   R  N+GLRLD  V   +        RV D+ I H+  +   DHA I + L
Sbjct:   63 DTQDEKKQAEPEK-VTKKRGKKETDTAESDK-PKKKAKDEQETNKKEKVVQEKVAIEKSDIKHAELPSKRYKIVSWNVTTIRSLMK---------KNPELLKKLMEQE-QPDLICFQETKLKQEEHDEYEEMLKSQFPGDQGYEAHFSSSLSNKSYAGTLVLVR-----------SSKDKATAQ-KQTKMDSFF--KGKDSKSAKKDE-------ETACPPLKVTFGLSTLSKD--DGEIAAEVIQ----------------EGRTITVEFESFFVVATYVPNSGEKLQRLEFRTKLWDRKVVEYLKKLEASGKPVIWCGDLNVAHLDNDIWNVGAKHLVKSAGTTPEERDSFSKILEEGYVDCFRHLHGEDAKGWFSYWSVRAGNRPWNRGLRLDYFVASKSLCSQDSLPRVVDADI-HDEFVAI-DHAAISLTL 445          
BLAST of EWM28136.1 vs. NCBI_GenBank
Match: gi|219122782|ref|XP_002181718.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217406994|gb|EEC46932.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 188.348 bits (477), Expect = 1.105e-50
Identity = 142/414 (34.30%), Postives = 203/414 (49.03%), Query Frame = 0
Query:   56 PDDCERQLLSSSKQVTELVLQTERDLLARNSLPEK-------SFKVLSWNVNGLNGILNGKAAQINGNKGSNVLQQLVQEEGNVDVIFLQETKLQ-----DAKCAAFEDVLP--GYVAHWSCSKTKKGYAGVAAFVHEKYVKRCISSYSDANKGSSRGK-QATLASFFPTKGKETEPTKGAEGRIAAMKTAACKSASMASSCSIKDKEIEDGDSSVEALQVLSVRRGCDGEDDEDEEGRVLTLEFGSFWVVGVYVTNSGMKLERLEYRLKQWNPSFQAYLARLNAVK--PALVVGDMNVAPEASDVYNAGAKHLAKVPGLTPEEREAHAAWLRTGWKDTFRALHPDARGAYTYWNVKTRARAENKGLRLDLAVIGAADMDGGRGVRVRDSFILHEATIGFSDHAPIGVVLDLGA 452
            P+D  ++     K  T  VL TERD + R    E+       + ++ SWNV GL  ++             + L   V+E  NVDV+ LQETKLQ     D K      +L   G+ +++SCS  +KGY+G + FV  + +           KGS   K Q TL S+F   GK  E                       SS S+K  E    D  +   + +S +   D     D EGR++ ++F SF +  VYV NSG KLERL YR ++W+  F +++ +    +  P L +GD+NVA    +V+N GAKHLAK  G+T EER +  A L  G+ D FR LHP A+G Y+YW+ +   R  NKGLRLD  +   +  D      VRDS++L       SDH P+ + L++ A
Sbjct:  125 PEDTTKENSPKKKAPTHQVL-TERDDIPRLWSDEQAAKNGSYTMRIASWNVAGLRALMRN---------SPHALSDFVREH-NVDVLCLQETKLQESHLDDPKLKIRGHLLEKEGFDSYYSCSTARKGYSGTSVFVKRRQLI----------KGSKVAKKQKTLGSYF---GKNDE--------------------RETSSNSLKGTEELSIDPHLLVPEGVSFQMNVD---KHDSEGRIVVVDFPSFTMCNVYVPNSGQKLERLSYRTEEWDKDFLSFIQKKQKDRGVPVLWLGDLNVAHTNLEVWNDGAKHLAKQAGVTAEERASFEAQLNAGFIDAFRRLHPTAKGHYSYWSQRAGNREPNKGLRLDYFICDPSLFDEESKTIVRDSYVL--PLQQGSDHCPVVLELEIKA 489          
BLAST of EWM28136.1 vs. NCBI_GenBank
Match: gi|167521904|ref|XP_001745290.1| (hypothetical protein, partial [Monosiga brevicollis MX1] >gi|163776248|gb|EDQ89868.1| predicted protein, partial [Monosiga brevicollis MX1])

HSP 1 Score: 169.474 bits (428), Expect = 5.632e-46
Identity = 90/197 (45.69%), Postives = 119/197 (60.41%), Query Frame = 0
Query:  252 GDSSVEALQVLSVRRGCDGEDDEDEEGRVLTLEFGSFWVVGVYVTNSGMKLERLEYRLKQWNPSFQAYLARLNAVKPALVVGDMNVAPEASDVYNAGAKHLAKVPGLTPEEREAHAAWLRTGWKDTFRALHPDARGAYTYWNVKTRARAENKGLRLDLAVIGAADMDGGRGVRVRDSFILHEATIGFSDHAPIGVVL 448
            G +     + LSV+ G       D+EGR +T+E    +V+GVYV NSG  L+RL+YRL +WN  F AY+  L A KP LVVGD+NVA    D+YNAG  HL K  G TP+ER A   +L  G+ DTFR L+P+  GA+TYW+ +T  R ++KGLRLD AV   A ++    +R  DS +        SDH PI +VL
Sbjct:   74 GATPTSDFRALSVQYGIKSAH-HDQEGRTITVELPDLFVIGVYVPNSGQDLKRLDYRLNEWNVDFLAYIRELEASKPVLVVGDLNVAHLDLDIYNAG--HLVKSAGCTPQERTAFTEFLDQGFTDTFRKLYPEHTGAFTYWSARTGGRQDSKGLRLDYAVCSNALLEANSPLRCLDSVM-------GSDHCPIAIVL 260          

HSP 2 Score: 75.485 bits (184), Expect = 9.879e-12
Identity = 39/83 (46.99%), Postives = 49/83 (59.04%), Query Frame = 0
Query:   92 FKVLSWNVNGLNGILNGKAAQINGNKGSNVLQQLVQEEGNVDVIFLQETKLQDAKCAAFEDVLPGYVAHWSCSKTKKGYAGVA 174
              V+SWNVNGL  +L               L  LVQ E N D++FLQETKLQ +  A + ++LPGY   WSCS+ KKGY+G A
Sbjct:    1 LHVVSWNVNGLRAVLKNH---------PKALPDLVQAE-NPDLLFLQETKLQASHVADYANLLPGYTGLWSCSRAKKGYSGTA 73          
BLAST of EWM28136.1 vs. NCBI_GenBank
Match: gi|255075203|ref|XP_002501276.1| (predicted protein [Micromonas commoda] >gi|226516540|gb|ACO62534.1| predicted protein [Micromonas commoda])

HSP 1 Score: 169.859 bits (429), Expect = 4.887e-45
Identity = 94/185 (50.81%), Postives = 116/185 (62.70%), Query Frame = 0
Query:  276 EEGRVLTLEFGSFWVVGVYVTNSGMKLERLEYRLKQWNPSFQAYLARLNAV---KPALVVGDMNVAPEASDVYNAGAKHLAKVPGLTPEEREAHAAWLRT----GWKDTFRALHPDARGAYTYWNVKTRARAENKGLRLDLAVIGAADMDGGR---GVRVRDSFILHEATIGFSDHAPIGVVLDL 450
            +EGRVLTLEF +F +V  YV NSG KLERLEYRLK+W+  F+AYLA L+     KP +V GD+NV     D+YN  A H  K  GLTPEER   ++W RT       DTFRA HP+ARG Y+YW+ +   +  N+GLRLD        M  GR   GVRV DSF+L +     SDHAP+G+ L L
Sbjct:  171 DEGRVLTLEFDAFTMVFTYVPNSGQKLERLEYRLKKWDVDFRAYLAHLDGETRGKPVIVGGDLNVGHLDEDIYNVDAPHTKKQCGLTPEER---SSWTRTLESVKLVDTFRAFHPNARGWYSYWSGRAGNKPRNRGLRLDYFAASERIMSSGRDGGGVRVVDSFVLDKLVAEASDHAPVGITLAL 352          
The following BLAST results are available for this feature:
BLAST of EWM28136.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585110480|gb|EWM28136.1|0.000e+0100.00Endonuclease/exonuclease/phosphatase [Nannochlorop... [more]
gi|298708328|emb|CBJ48391.1|2.235e-7138.00conserved unknown protein [Ectocarpus siliculosus][more]
gi|693500749|emb|CEF97122.1|8.009e-5535.02Exodeoxyribonuclease III xth [Ostreococcus tauri][more]
gi|523540403|ref|XP_003078172.2|4.582e-5433.33ARP protein (ISS), partial [Ostreococcus tauri][more]
gi|1199288728|gb|OUS43864.1|1.378e-5333.33ARP protein, partial [Ostreococcus tauri][more]
gi|929762665|ref|XP_014156313.1|2.318e-5232.87hypothetical protein SARC_05307 [Sphaeroforma arct... [more]
gi|551675602|ref|XP_005840555.1|2.451e-5232.80apurinic/apyrimidinic endonuclease family member i... [more]
gi|219122782|ref|XP_002181718.1|1.105e-5034.30predicted protein [Phaeodactylum tricornutum CCAP ... [more]
gi|167521904|ref|XP_001745290.1|5.632e-4645.69hypothetical protein, partial [Monosiga brevicolli... [more]
gi|255075203|ref|XP_002501276.1|4.887e-4550.81predicted protein [Micromonas commoda] >gi|2265165... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2542rna2542Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications