EWM28222.1, cds2523 (CDS) Nannochloropsis gaditana

Overview
NameEWM28222.1
Unique Namecds2523
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002459.1:596976..597953 -
Alignment locationCM002459.1:596451..596888 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM28222.1
Productc2h2 zinc finger protein
Orig transcript idgnl|cribi|Naga_100004g175.9153.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:596976..597953 -
CM002459.1supercontigCM002459.1:596451..596888 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0046872metal ion binding
Vocabulary: INTERPRO
TermDefinition
IPR007087Znf_C2H2
IPR019446DUF2431
IPR015880Znf_C2H2-like
Homology
BLAST of EWM28222.1 vs. NCBI_GenBank
Match: gi|585110567|gb|EWM28222.1| (c2h2 zinc finger protein [Nannochloropsis gaditana])

HSP 1 Score: 984.171 bits (2543), Expect = 0.000e+0
Identity = 471/471 (100.00%), Postives = 471/471 (100.00%), Query Frame = 0
Query:    1 MKRKHAETLCTKPLRVLVLGDGNLSYSLGLAERLPGAQLLATSFDNPQELHRKYTESHATVTRLEALGARVRVIYGVDALNILETLRRVQMEEGKRADSFREPPHDSVSNCARTADGHPLEVFDHVIFNHPHTGWEDIHRHRALLAHFLESAKAVLACSTTQGTEGGQVHVTLAGDQCKRWKLLQTAARLGFKLRHICDFYRQFGPDHPPVDIKRHQSGKSFRIRGLPSFTYSFTLEEVSYYSATANAAYSFPPSPSLWRHAYDPEEHEAAMTIRPGNKGVAGGSKGAPITDVVKSIKCDTCEKCFRGPKDLRKHMGDAHDKPPVQAEGLPCEACGRDFRDEAALGQHQRAKHSGRFQDLKPDWSTAALNVSETDESNAQPSLHFQGVEKEAYEASRADREEDMVLCTVCDYYVASRTAEHLADLRPPERPIYNCRSCDRTFRELRALKQHANACWPFKNGHGIERGNKEK 471
            MKRKHAETLCTKPLRVLVLGDGNLSYSLGLAERLPGAQLLATSFDNPQELHRKYTESHATVTRLEALGARVRVIYGVDALNILETLRRVQMEEGKRADSFREPPHDSVSNCARTADGHPLEVFDHVIFNHPHTGWEDIHRHRALLAHFLESAKAVLACSTTQGTEGGQVHVTLAGDQCKRWKLLQTAARLGFKLRHICDFYRQFGPDHPPVDIKRHQSGKSFRIRGLPSFTYSFTLEEVSYYSATANAAYSFPPSPSLWRHAYDPEEHEAAMTIRPGNKGVAGGSKGAPITDVVKSIKCDTCEKCFRGPKDLRKHMGDAHDKPPVQAEGLPCEACGRDFRDEAALGQHQRAKHSGRFQDLKPDWSTAALNVSETDESNAQPSLHFQGVEKEAYEASRADREEDMVLCTVCDYYVASRTAEHLADLRPPERPIYNCRSCDRTFRELRALKQHANACWPFKNGHGIERGNKEK
Sbjct:    1 MKRKHAETLCTKPLRVLVLGDGNLSYSLGLAERLPGAQLLATSFDNPQELHRKYTESHATVTRLEALGARVRVIYGVDALNILETLRRVQMEEGKRADSFREPPHDSVSNCARTADGHPLEVFDHVIFNHPHTGWEDIHRHRALLAHFLESAKAVLACSTTQGTEGGQVHVTLAGDQCKRWKLLQTAARLGFKLRHICDFYRQFGPDHPPVDIKRHQSGKSFRIRGLPSFTYSFTLEEVSYYSATANAAYSFPPSPSLWRHAYDPEEHEAAMTIRPGNKGVAGGSKGAPITDVVKSIKCDTCEKCFRGPKDLRKHMGDAHDKPPVQAEGLPCEACGRDFRDEAALGQHQRAKHSGRFQDLKPDWSTAALNVSETDESNAQPSLHFQGVEKEAYEASRADREEDMVLCTVCDYYVASRTAEHLADLRPPERPIYNCRSCDRTFRELRALKQHANACWPFKNGHGIERGNKEK 471          
BLAST of EWM28222.1 vs. NCBI_GenBank
Match: gi|553195474|ref|XP_005856154.1| (hypothetical protein NGA_2113200, partial [Nannochloropsis gaditana CCMP526] >gi|422292905|gb|EKU20206.1| hypothetical protein NGA_2113200, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 336.265 bits (861), Expect = 6.442e-112
Identity = 163/163 (100.00%), Postives = 163/163 (100.00%), Query Frame = 0
Query:    1 MKRKHAETLCTKPLRVLVLGDGNLSYSLGLAERLPGAQLLATSFDNPQELHRKYTESHATVTRLEALGARVRVIYGVDALNILETLRRVQMEEGKRADSFREPPHDSVSNCARTADGHPLEVFDHVIFNHPHTGWEDIHRHRALLAHFLESAKAVLACSTTQG 163
            MKRKHAETLCTKPLRVLVLGDGNLSYSLGLAERLPGAQLLATSFDNPQELHRKYTESHATVTRLEALGARVRVIYGVDALNILETLRRVQMEEGKRADSFREPPHDSVSNCARTADGHPLEVFDHVIFNHPHTGWEDIHRHRALLAHFLESAKAVLACSTTQG
Sbjct:    2 MKRKHAETLCTKPLRVLVLGDGNLSYSLGLAERLPGAQLLATSFDNPQELHRKYTESHATVTRLEALGARVRVIYGVDALNILETLRRVQMEEGKRADSFREPPHDSVSNCARTADGHPLEVFDHVIFNHPHTGWEDIHRHRALLAHFLESAKAVLACSTTQG 164          
BLAST of EWM28222.1 vs. NCBI_GenBank
Match: gi|1214690434|gb|OWZ05666.1| (hypothetical protein PHMEG_00022207 [Phytophthora megakarya])

HSP 1 Score: 166.007 bits (419), Expect = 9.282e-43
Identity = 146/455 (32.09%), Postives = 200/455 (43.96%), Query Frame = 0
Query:   15 RVLVLGDGNLSYSLGLAERLPGA-QLLATSFDNPQELHRKYTESHATVTRLEALGARVRVIYGVDALNILETLRRVQMEEGKRADSFREPPHDSVSNCARTADGHPLEVFDHVIFNHPHTGWEDIHRHRALLAHFLESAKAVLACSTTQGTEGGQVHVTLAGDQCKRWKLLQTAARLGFKLRHICDFYRQFGPDHPPVDIKRHQSGKSFRIRGLPSFTYSFTLE-EVSYYSATANAAYSFPPSPSLWRHAYDP---EEHEAAMTIRPGNKGVAGGSKGAPITDVVKSIKCDTCEKCFRGPKDLRKHMGDAHDKPPVQAEG-------LPCEACGRDFRDEAALGQHQRAKHSGRFQDLKPDWSTAALNVSETDESNAQPSLHFQGVEKEAYEASRADREEDMVLCTVC--DYYVASRTAEHLADLRPPERPIYNCRSCDRTFRELRALKQHANAC 455
            RVL +GDGN SYSL LA++     QL ATS+D+  EL  KY ES    T+L+ LGA   V++ VDA NI E+L   Q                                FD V+FNHPH G E++ RH++LL+HF  SA  VL  +      G  + +TLA  Q +RW+ ++ A + G +L    D            + KRHQ+GKSF         +  TL  E    S+T    + F       + A DP   ++ E+A T+  G K V+   K    +++     C  CE+ F+  + LR H+   H+      EG       LPCE C R F+ E A  QHQ AKH G+   +KPDW      V  T                EA        E +   C++C   +        H   L+P       C +C R F E RAL+QH N C
Sbjct:   40 RVLTVGDGNFSYSLALAKQTDTTLQLTATSYDSYDELVAKYPESKRICTQLKELGA--SVLHRVDATNIRESLVAEQK-------------------------------FDSVVFNHPHCGEENVRRHQSLLSHFYASALDVLEENEENEWNG--ILLTLAEGQPERWQAVERAQKAGLRLHRQVDNVDNDEVFGFAYERKRHQNGKSF---------HQVTLHGERKKQSST---LFIFRRQ----KDAMDPVKVKDTESATTLESGEK-VSASRKRKAESELPHEFACTQCERSFKSSQGLRTHVHMVHE-----LEGGAPKKVLLPCEFCDRTFKKEDARRQHQLAKH-GKDPLIKPDWFEKQQTVPTT--------------VSEAESVVSTSAEAEAKTCSICQLSFPTTEDFDAHWQKLQPRAAAKRKCATCAREFDEERALRQHQNFC 422          
BLAST of EWM28222.1 vs. NCBI_GenBank
Match: gi|301101473|ref|XP_002899825.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262102827|gb|EEY60879.1| conserved hypothetical protein [Phytophthora infestans T30-4])

HSP 1 Score: 160.229 bits (404), Expect = 1.557e-40
Identity = 137/459 (29.85%), Postives = 202/459 (44.01%), Query Frame = 0
Query:   16 VLVLGDGNLSYSLGLAERLPG------AQLLATSFDNPQELHRKYTESHATVTRLEALGARVRVIYGVDALNILETLRRVQMEEGKRADSFREPPHDSVSNCARTADGHPLEVFDHVIFNHPHTGWEDIHRHRALLAHFLESAKAVLACSTTQGTEGGQVHVTLAGDQCKRWKLLQTAARLGFKLRHICDFYRQFGPDHPPVDIKRHQSGKSFRIRGL-------PSFTYSFTLEEVSYYSATA-NAAYSFPPSPSLWRHAYDPEEHEAAMTIRPGNKGVAGGSKGAPITDVVKSIKCDTCEKCFRGPKDLRKHMGDAHD---KPPVQAEGLPCEACGRDFRDEAALGQHQRAKHSGRFQDLKPDWSTAALNVSETDESNAQPSLHFQGVEKEAYEASRADREEDMVLCTVC--DYYVASRTAEHLADLRPPERPIYNCRSCDRTFRELRALKQHANAC 455
            VL +GDGN SYSL LA++          QL ATS+D+  EL  KY ES     +L+ LGA V  ++ VDA N+ E+L                            A G     FD V+FNHPH G E++ RH++LL+HF  SA  +L    ++  EG  + +TLA  Q +RW+ ++ A + G +L    D            + KRHQ+GKSF    L        S  + F  +  +  +AT  + A S  P+ +L R +    + +A                    +++     C  C+  F+  + LR H+   H+           LPCE C R F+ E A  QHQ AKH G+   ++PDW        +T+ +NA         +K    A+    + D   C++C   +  +     H   L+P      NC +C R F E RAL+QH N C
Sbjct:   37 VLTVGDGNFSYSLALAKQHKNQGNDTPVQLTATSYDSYNELVAKYPESKRICGQLKELGASV--MHRVDATNLRESL---------------------------VAAGAEQLTFDAVVFNHPHCGEENVRRHQSLLSHFYTSALEIL--EDSEEDEGNGILLTLAEGQPERWQAVERALQAGLRLHRRVDDVDNDAVFGLKYERKRHQNGKSFHQVTLHGERKKQASTLFIFRRQNKATEAATGEDKATSTDPAVTLERKSSLSRKRKAE-------------------SELPFEFACTQCDMSFKSAQGLRTHVHMVHELEGDAKANKVLLPCEFCDRTFKKEDARRQHQLAKH-GKDPLIRPDW----YEKQQTEAANAASRYS----DKVVAAAASLTTDSDPKTCSICLLSFTTSEDFDAHWQKLQPRASAKRNCPTCSREFDEERALRQHQNFC 436          
BLAST of EWM28222.1 vs. NCBI_GenBank
Match: gi|675190487|ref|XP_008904128.1| (hypothetical protein PPTG_10506 [Phytophthora parasitica INRA-310] >gi|567962900|gb|ETK88412.1| hypothetical protein L915_07328 [Phytophthora parasitica] >gi|567991610|gb|ETL41813.1| hypothetical protein L916_07274 [Phytophthora parasitica] >gi|568051299|gb|ETM48207.1| hypothetical protein L914_07221 [Phytophthora parasitica] >gi|568095605|gb|ETN10367.1| hypothetical protein PPTG_10506 [Phytophthora parasitica INRA-310])

HSP 1 Score: 157.532 bits (397), Expect = 1.475e-39
Identity = 141/459 (30.72%), Postives = 201/459 (43.79%), Query Frame = 0
Query:   15 RVLVLGDGNLSYSLGLAERLPGA------QLLATSFDNPQELHRKYTESHATVTRLEALGARVRVIYGVDALNILETLRRVQMEEGKRADSFREPPHDSVSNCARTADGHPLEVFDHVIFNHPHTGWEDIHRHRALLAHFLESAKAVLACSTTQGTEGGQVHVTLAGDQCKRWKLLQTAARLGFKL-RHI--CDFYRQFGPDHPPVDIKRHQSGKSFRIRGLPSFTYSFTLEEVSYYSATANAAYSFPPSPSLWRHAYDPEEHEAAMTIRPGNKGVAGGSKGAPITDVVKSIKCDTCEKCFRGPKDLRKHMGDAHDKPPVQAEG-------LPCEACGRDFRDEAALGQHQRAKHSGRFQDLKPDWSTAALNVSETDESNAQPSLHFQGVEKEAYEASRADREEDMVLCTVC--DYYVASRTAEHLADLRPPERPIYNCRSCDRTFRELRALKQHANAC 455
            RVL +GDGN +YSL LA++          QL A+S+D+  EL  KY E      +L+ LGA V  ++ VDA N+ E+L     E+ K                           FD VIFNHPH G E++ RH++LL+HF  SA  V+     +  E   + +TLA  Q +RW+ ++ A + G +L R +   D    FG  +   D KRHQ+GKSF               +V+ +      A +      ++R A D +   A        K   G  K    +++     C  CE+ F+  + LR H+   H+      EG       LPCE C R F+   A  QHQ AKH G+   +KPDW       + T ESN  P+         A  +S A+ +     C++C   +        H   L+P       C  C R F E RAL+QH N C
Sbjct:   36 RVLTVGDGNFTYSLALAKQHKNQSNDTPLQLTASSYDSYDELVAKYPECKRICAQLKELGASV--LHRVDATNLRESLVAAGAEQLK---------------------------FDAVIFNHPHCGEENVRRHQSLLSHFYASALDVI--EDNEEDEESGILLTLAEGQPERWQAVERALKAGLRLHRQVDEVDNDEVFGLVY---DRKRHQNGKSFH--------------QVTLHGERKKQASTL----FIFRRATDEDNVPATAPSVSEEKSAPGSRKRKAESELPLEFACTQCERSFKSAQGLRTHVHMVHE-----LEGGANKKVLLPCEFCDRTFKKGDARRQHQLAKH-GKDPLIKPDWYDK--QQTATSESNVAPT--------PAVLSSNAEPK----TCSICHLSFTTTEEFGAHWQKLQPRAATKRKCAICTREFDEERALRQHQNFC 422          
BLAST of EWM28222.1 vs. NCBI_GenBank
Match: gi|570953008|gb|ETP18265.1| (hypothetical protein F441_07482 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 156.377 bits (394), Expect = 3.774e-39
Identity = 141/459 (30.72%), Postives = 201/459 (43.79%), Query Frame = 0
Query:   15 RVLVLGDGNLSYSLGLAERLPGA------QLLATSFDNPQELHRKYTESHATVTRLEALGARVRVIYGVDALNILETLRRVQMEEGKRADSFREPPHDSVSNCARTADGHPLEVFDHVIFNHPHTGWEDIHRHRALLAHFLESAKAVLACSTTQGTEGGQVHVTLAGDQCKRWKLLQTAARLGFKL-RHI--CDFYRQFGPDHPPVDIKRHQSGKSFRIRGLPSFTYSFTLEEVSYYSATANAAYSFPPSPSLWRHAYDPEEHEAAMTIRPGNKGVAGGSKGAPITDVVKSIKCDTCEKCFRGPKDLRKHMGDAHDKPPVQAEG-------LPCEACGRDFRDEAALGQHQRAKHSGRFQDLKPDWSTAALNVSETDESNAQPSLHFQGVEKEAYEASRADREEDMVLCTVC--DYYVASRTAEHLADLRPPERPIYNCRSCDRTFRELRALKQHANAC 455
            RVL +GDGN +YSL LA++          QL A+S+D+  EL  KY E      +L+ LGA V  ++ VDA N+ E+L     E+ K                           FD VIFNHPH G E++ RH++LL+HF  SA  V+     +  E   + +TLA  Q +RW+ ++ A + G +L R +   D    FG  +   D KRHQ+GKSF               +V+ +      A +      ++R A D +   A        K   G  K    +++     C  CE+ F+  + LR H+   H+      EG       LPCE C R F+   A  QHQ AKH G+   +KPDW       + T ESN  P+         A  +S A+ +     C++C   +        H   L+P       C  C R F E RAL+QH N C
Sbjct:   36 RVLTVGDGNFTYSLALAKQHKNQSNDTPLQLTASSYDSYDELVAKYPECKRICAQLKELGASV--LHRVDATNLRESLVAAGAEQLK---------------------------FDAVIFNHPHCGEENVRRHQSLLSHFYASALDVI--EDNEEDEESGILLTLAEGQPERWQAVERALKAGLRLHRQVDEVDNDEVFGLVY---DRKRHQNGKSFH--------------QVTLHGERKKQASTL----FIFRRATDEDNVPATAPSVSEEKSAPGSRKRKAESELPLEFACTQCERSFKSAQGLRTHVHMVHE-----LEGGANKKVLLPCEFCDRTFKKGDARRQHQLAKH-GKDPLIKPDWYDK--QQTATLESNVAPT--------PAVLSSNAEPK----TCSICHLSFTTTEEFGAHWQKLQPRAATKRKCAICTREFDEERALRQHQNFC 422          
BLAST of EWM28222.1 vs. NCBI_GenBank
Match: gi|566025567|gb|ETI48478.1| (hypothetical protein F443_07496 [Phytophthora parasitica P1569] >gi|570987483|gb|ETP46203.1| hypothetical protein F442_07513 [Phytophthora parasitica P10297] >gi|970638985|gb|KUF82265.1| hypothetical protein AM587_10007567 [Phytophthora nicotianae] >gi|970655673|gb|KUF93798.1| hypothetical protein AM588_10004380 [Phytophthora nicotianae])

HSP 1 Score: 156.377 bits (394), Expect = 3.774e-39
Identity = 141/459 (30.72%), Postives = 201/459 (43.79%), Query Frame = 0
Query:   15 RVLVLGDGNLSYSLGLAERLPGA------QLLATSFDNPQELHRKYTESHATVTRLEALGARVRVIYGVDALNILETLRRVQMEEGKRADSFREPPHDSVSNCARTADGHPLEVFDHVIFNHPHTGWEDIHRHRALLAHFLESAKAVLACSTTQGTEGGQVHVTLAGDQCKRWKLLQTAARLGFKL-RHI--CDFYRQFGPDHPPVDIKRHQSGKSFRIRGLPSFTYSFTLEEVSYYSATANAAYSFPPSPSLWRHAYDPEEHEAAMTIRPGNKGVAGGSKGAPITDVVKSIKCDTCEKCFRGPKDLRKHMGDAHDKPPVQAEG-------LPCEACGRDFRDEAALGQHQRAKHSGRFQDLKPDWSTAALNVSETDESNAQPSLHFQGVEKEAYEASRADREEDMVLCTVC--DYYVASRTAEHLADLRPPERPIYNCRSCDRTFRELRALKQHANAC 455
            RVL +GDGN +YSL LA++          QL A+S+D+  EL  KY E      +L+ LGA V  ++ VDA N+ E+L     E+ K                           FD VIFNHPH G E++ RH++LL+HF  SA  V+     +  E   + +TLA  Q +RW+ ++ A + G +L R +   D    FG  +   D KRHQ+GKSF               +V+ +      A +      ++R A D +   A        K   G  K    +++     C  CE+ F+  + LR H+   H+      EG       LPCE C R F+   A  QHQ AKH G+   +KPDW       + T ESN  P+         A  +S A+ +     C++C   +        H   L+P       C  C R F E RAL+QH N C
Sbjct:   36 RVLTVGDGNFTYSLALAKQHKNQSNDTPLQLTASSYDSYDELVAKYPECKRICAQLKELGASV--LHRVDATNLRESLVAAGAEQLK---------------------------FDAVIFNHPHCGEENVRRHQSLLSHFYASALDVI--EDNEEDEESGILLTLAEGQPERWQAVERALKAGLRLHRQVDEVDNDEVFGLVY---DRKRHQNGKSFH--------------QVTLHGERKKQASTL----FIFRRATDEDNVPATAPSVSEEKLAPGSRKRKAESELPLEFACTQCERSFKSAQGLRTHVHMVHE-----LEGGANKKVLLPCEFCDRTFKKGDARRQHQLAKH-GKDPLIKPDWYDK--QQTATSESNVAPT--------PAVLSSNAEPK----TCSICHLSFTTTEEFGAHWQKLQPRAATKRKCAICTREFDEERALRQHQNFC 422          
BLAST of EWM28222.1 vs. NCBI_GenBank
Match: gi|568020850|gb|ETL94966.1| (hypothetical protein L917_07162 [Phytophthora parasitica])

HSP 1 Score: 156.377 bits (394), Expect = 4.265e-39
Identity = 141/459 (30.72%), Postives = 201/459 (43.79%), Query Frame = 0
Query:   15 RVLVLGDGNLSYSLGLAERLPGA------QLLATSFDNPQELHRKYTESHATVTRLEALGARVRVIYGVDALNILETLRRVQMEEGKRADSFREPPHDSVSNCARTADGHPLEVFDHVIFNHPHTGWEDIHRHRALLAHFLESAKAVLACSTTQGTEGGQVHVTLAGDQCKRWKLLQTAARLGFKL-RHI--CDFYRQFGPDHPPVDIKRHQSGKSFRIRGLPSFTYSFTLEEVSYYSATANAAYSFPPSPSLWRHAYDPEEHEAAMTIRPGNKGVAGGSKGAPITDVVKSIKCDTCEKCFRGPKDLRKHMGDAHDKPPVQAEG-------LPCEACGRDFRDEAALGQHQRAKHSGRFQDLKPDWSTAALNVSETDESNAQPSLHFQGVEKEAYEASRADREEDMVLCTVC--DYYVASRTAEHLADLRPPERPIYNCRSCDRTFRELRALKQHANAC 455
            RVL +GDGN +YSL LA++          QL A+S+D+  EL  KY E      +L+ LGA V  ++ VDA N+ E+L     E+ K                           FD VIFNHPH G E++ RH++LL+HF  SA  V+     +  E   + +TLA  Q +RW+ ++ A + G +L R +   D    FG  +   D KRHQ+GKSF               +V+ +      A +      ++R A D +   A        K   G  K    +++     C  CE+ F+  + LR H+   H+      EG       LPCE C R F+   A  QHQ AKH G+   +KPDW       + T ESN  P+         A  +S A+ +     C++C   +        H   L+P       C  C R F E RAL+QH N C
Sbjct:   36 RVLTVGDGNFTYSLALAKQHKNQSNDTPLQLTASSYDSYDELVAKYPECKRICAQLKELGASV--LHRVDATNLRESLVAAGAEQLK---------------------------FDAVIFNHPHCGEENVRRHQSLLSHFYASALDVI--EDNEEDEESGILLTLAEGQPERWQAVERALKAGLRLHRQVDEVDNDEVFGLVY---DRKRHQNGKSFH--------------QVTLHGERKKQASTL----FIFRRATDEDNVPATAPSVSEEKLAPGSRKRKAESELPLEFACTQCERSFKSAQGLRTHVHMVHE-----LEGGANKKVLLPCEFCDRTFKKGDARRQHQLAKH-GKDPLIKPDWYDK--QQTATSESNVAPT--------PAVLSSNAEPK----TCSICHLSFTTTEEFGAHWQKLQPRAATKRKCAICTREFDEERALRQHQNFC 422          
BLAST of EWM28222.1 vs. NCBI_GenBank
Match: gi|570329309|gb|ETO77257.1| (hypothetical protein F444_07516 [Phytophthora parasitica P1976])

HSP 1 Score: 155.992 bits (393), Expect = 4.723e-39
Identity = 140/459 (30.50%), Postives = 199/459 (43.36%), Query Frame = 0
Query:   15 RVLVLGDGNLSYSLGLAERLPGA------QLLATSFDNPQELHRKYTESHATVTRLEALGARVRVIYGVDALNILETLRRVQMEEGKRADSFREPPHDSVSNCARTADGHPLEVFDHVIFNHPHTGWEDIHRHRALLAHFLESAKAVLACSTTQGTEGGQVHVTLAGDQCKRWKLLQTAARLGFKLRHICDFYRQ---FGPDHPPVDIKRHQSGKSFRIRGLPSFTYSFTLEEVSYYSATANAAYSFPPSPSLWRHAYDPEEHEAAMTIRPGNKGVAGGSKGAPITDVVKSIKCDTCEKCFRGPKDLRKHMGDAHDKPPVQAEG-------LPCEACGRDFRDEAALGQHQRAKHSGRFQDLKPDWSTAALNVSETDESNAQPSLHFQGVEKEAYEASRADREEDMVLCTVC--DYYVASRTAEHLADLRPPERPIYNCRSCDRTFRELRALKQHANAC 455
            RVL +GDGN +YSL LA++          QL A+S+D+  EL  KY E      +L+ LGA V  ++ VDA N+ E+L     E+ K                           FD VIFNHPH G E++ RH++LL+HF  SA  V+     +  E   + +TLA  Q +RW+ ++ A + G +L    D       FG  +   D KRHQ+GKSF               +V+ +      A +      ++R A D +   A        K   G  K    +++     C  CE+ F+  + LR H+   H+      EG       LPCE C R F+   A  QHQ AKH G+   +KPDW       + T ESN  P+         A  +S A+ +     C++C   +        H   L+P       C  C R F E RAL+QH N C
Sbjct:   36 RVLTVGDGNFTYSLALAKQHKNQSNDTPLQLTASSYDSYDELVAKYPECKRICAQLKELGASV--LHRVDATNLRESLVAAGAEQLK---------------------------FDAVIFNHPHCGEENVRRHQSLLSHFYASALDVI--EDNEEDEESGILLTLAEGQPERWQAVERALKAGLRLHRQVDEVDNDEVFGLVY---DRKRHQNGKSFH--------------QVTLHGERKKQASTL----FIFRRATDEDNVPATAPSVSEEKLAPGSRKRKAESELPLEFACTQCERSFKSAQGLRTHVHMVHE-----LEGGANKKVLLPCEFCDRTFKKGDARRQHQLAKH-GKDPLIKPDWYDK--QQTATSESNVAPT--------PAVLSSNAEPK----TCSICHLSFTTTEEFGAHWQKLQPRAATKRKCAICTREFDEERALRQHQNFC 422          
BLAST of EWM28222.1 vs. NCBI_GenBank
Match: gi|695461904|ref|XP_009538325.1| (hypothetical protein PHYSODRAFT_532154 [Phytophthora sojae] >gi|348666601|gb|EGZ06428.1| hypothetical protein PHYSODRAFT_532154 [Phytophthora sojae])

HSP 1 Score: 154.451 bits (389), Expect = 1.890e-38
Identity = 143/470 (30.43%), Postives = 203/470 (43.19%), Query Frame = 0
Query:   15 RVLVLGDGNLSYSLGLAERLPGA-------QLLATSFDNPQELHRKYTESHATVTRLEALGARVRVIYGVDALNILETLRRVQMEEGKRADSFREPPHDSVSNCARTADGHPLEVFDHVIFNHPHTGWEDIHRHRALLAHFLESAKAVL----ACSTTQGTEGGQVHVTLAGDQCKRWKLLQTAARLGFKL-RHI--CDFYRQFGPDHPPVDIKRHQSGKSFRIRGLPSFTYSFTLEEVSYYSATANAAYSFPPSPSLWRHAYDPEEHEAAMTIRPGNKGVAGGSKGAPITDVVKS-------IKCDTCEKCFRGPKDLRKHMGDAHDKPPVQAEG--LPCEACGRDFRDEAALGQHQRAKHSGRFQDLKPDWSTAALNVSETDESNAQPSLHFQGVEKEAYEASRADREEDMV----LCTVC--DYYVASRTAEHLADLRPPERPIYNCRSCDRTFRELRALKQHANAC 455
            RVL +GDGN SYSL LA++           QL ATS+D+  EL  KY ES     +L+ LGA V  ++ VDA NI E+L                            A G   + F  V+FNHPH G E++ RH++LL+HF  SA  VL         Q  E G + +TLA  Q +RW+ +Q A   G KL R +   D   +FG ++   + KRHQ+GKSF               +V+ +      A +      ++R              + G K  A  ++ AP++   K+         C  CE+ F+  + LR H+   H+     ++   LPCE C R F+ E A  QHQ AKH G+   +KPDW                    ++  +  A +A  A  E         C++C   +  A     H   L+P       C +C R F E RAL+QH N C
Sbjct:   37 RVLTVGDGNFSYSLALAKQHKSKGDDTRPLQLTATSYDSYDELVAKYPESKRICAQLKELGASV--LHRVDATNIRESL---------------------------VAAGATSDKFHSVVFNHPHCGEENVRRHQSLLSHFYASALEVLEKGEGDEVEQSEESG-ILLTLAEGQPERWQAVQRALSAGLKLHRQVDNVDSDAKFGLEY---ERKRHQNGKSFH--------------QVTLHGERKKQASTL----FIFRRQ------------KAGEKVEAVEAEVAPVSRKRKAESELPLEFACTQCERSFKSAQGLRTHVHMVHELEGGASKKLLLPCEFCDRTFKKEDARRQHQLAKH-GKDPLIKPDW--------------------YEKQQAAASDAPSATTEAPATAEPQTCSICQLSFATAQEFDAHWQKLQPRSAAKRKCATCSREFDEERALRQHQNFC 422          
The following BLAST results are available for this feature:
BLAST of EWM28222.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585110567|gb|EWM28222.1|0.000e+0100.00c2h2 zinc finger protein [Nannochloropsis gaditana... [more]
gi|553195474|ref|XP_005856154.1|6.442e-112100.00hypothetical protein NGA_2113200, partial [Nannoch... [more]
gi|1214690434|gb|OWZ05666.1|9.282e-4332.09hypothetical protein PHMEG_00022207 [Phytophthora ... [more]
gi|301101473|ref|XP_002899825.1|1.557e-4029.85conserved hypothetical protein [Phytophthora infes... [more]
gi|675190487|ref|XP_008904128.1|1.475e-3930.72hypothetical protein PPTG_10506 [Phytophthora para... [more]
gi|570953008|gb|ETP18265.1|3.774e-3930.72hypothetical protein F441_07482 [Phytophthora para... [more]
gi|566025567|gb|ETI48478.1|3.774e-3930.72hypothetical protein F443_07496 [Phytophthora para... [more]
gi|568020850|gb|ETL94966.1|4.265e-3930.72hypothetical protein L917_07162 [Phytophthora para... [more]
gi|570329309|gb|ETO77257.1|4.723e-3930.50hypothetical protein F444_07516 [Phytophthora para... [more]
gi|695461904|ref|XP_009538325.1|1.890e-3830.43hypothetical protein PHYSODRAFT_532154 [Phytophtho... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2531rna2531Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications