EWM28192.1, cds2495 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28192.1 vs. NCBI_GenBank
Match: gi|585110537|gb|EWM28192.1| (x-ray repair cross-complementing protein 6 [Nannochloropsis gaditana]) HSP 1 Score: 1372.45 bits (3551), Expect = 0.000e+0 Identity = 664/664 (100.00%), Postives = 664/664 (100.00%), Query Frame = 0
Query: 1 MLTEDDMEVNDSADEEDGFSKDFDVIEDNLMVLIDARPPMLVENVQGTVPLVTALGIIHHVLKRKIMINQRDHVGILLFGAEAVDEKGEIVGSGNAKFSDMSRMSQVWGNQVHELQTLGQPTAKRIKQIERLCHEDTNIMNGLCLKHAQKLPGSSTSAALRDGLRACLRMLEGQSRKELDSRRIWLFTNEDDPSQVNDPSQVIKDAREGGVEMWVWHFPAQDGREFNRNKFYEPLLAAPTRFVQDGYKIADEKDPGYCTKMIDAGSGDVNSLLLGARTPLFKKRRYVRTKLHISVDPPISLDVAFYKTIQRCRKPMPVKLAAVSNRRLATSTKWMCEDLVQYVDPELDVACGLEFGKGGVTIPLHSAAYEMKQRVCQRDPGLHLLAFLPAEELAWELNVTSSTLIYPEEMALKGCTRAFSAIRKAMLQQHKMALVRLHINAVSYPRLAVLLAPPATPGLELIVLPFLDDLRAIESPHLESLPALPSMDQKEAAKSVISRLAMRWEEYYQGYSNPGLQKFYAGLQALALEQSEVDWNESADDRTWPDEKELLGRTGEAMRGLWESSRDPDKVLNGGSSGKRKSTVAGVDRLLSLKKEKREVKDSGKAEKGHHDSVKSEFEAFEGAQTREGLSKLTVRKLKDLCQELKLHVSGRKDDLIDRLLSQG 664
MLTEDDMEVNDSADEEDGFSKDFDVIEDNLMVLIDARPPMLVENVQGTVPLVTALGIIHHVLKRKIMINQRDHVGILLFGAEAVDEKGEIVGSGNAKFSDMSRMSQVWGNQVHELQTLGQPTAKRIKQIERLCHEDTNIMNGLCLKHAQKLPGSSTSAALRDGLRACLRMLEGQSRKELDSRRIWLFTNEDDPSQVNDPSQVIKDAREGGVEMWVWHFPAQDGREFNRNKFYEPLLAAPTRFVQDGYKIADEKDPGYCTKMIDAGSGDVNSLLLGARTPLFKKRRYVRTKLHISVDPPISLDVAFYKTIQRCRKPMPVKLAAVSNRRLATSTKWMCEDLVQYVDPELDVACGLEFGKGGVTIPLHSAAYEMKQRVCQRDPGLHLLAFLPAEELAWELNVTSSTLIYPEEMALKGCTRAFSAIRKAMLQQHKMALVRLHINAVSYPRLAVLLAPPATPGLELIVLPFLDDLRAIESPHLESLPALPSMDQKEAAKSVISRLAMRWEEYYQGYSNPGLQKFYAGLQALALEQSEVDWNESADDRTWPDEKELLGRTGEAMRGLWESSRDPDKVLNGGSSGKRKSTVAGVDRLLSLKKEKREVKDSGKAEKGHHDSVKSEFEAFEGAQTREGLSKLTVRKLKDLCQELKLHVSGRKDDLIDRLLSQG
Sbjct: 1 MLTEDDMEVNDSADEEDGFSKDFDVIEDNLMVLIDARPPMLVENVQGTVPLVTALGIIHHVLKRKIMINQRDHVGILLFGAEAVDEKGEIVGSGNAKFSDMSRMSQVWGNQVHELQTLGQPTAKRIKQIERLCHEDTNIMNGLCLKHAQKLPGSSTSAALRDGLRACLRMLEGQSRKELDSRRIWLFTNEDDPSQVNDPSQVIKDAREGGVEMWVWHFPAQDGREFNRNKFYEPLLAAPTRFVQDGYKIADEKDPGYCTKMIDAGSGDVNSLLLGARTPLFKKRRYVRTKLHISVDPPISLDVAFYKTIQRCRKPMPVKLAAVSNRRLATSTKWMCEDLVQYVDPELDVACGLEFGKGGVTIPLHSAAYEMKQRVCQRDPGLHLLAFLPAEELAWELNVTSSTLIYPEEMALKGCTRAFSAIRKAMLQQHKMALVRLHINAVSYPRLAVLLAPPATPGLELIVLPFLDDLRAIESPHLESLPALPSMDQKEAAKSVISRLAMRWEEYYQGYSNPGLQKFYAGLQALALEQSEVDWNESADDRTWPDEKELLGRTGEAMRGLWESSRDPDKVLNGGSSGKRKSTVAGVDRLLSLKKEKREVKDSGKAEKGHHDSVKSEFEAFEGAQTREGLSKLTVRKLKDLCQELKLHVSGRKDDLIDRLLSQG 664
BLAST of EWM28192.1 vs. NCBI_GenBank
Match: gi|553196542|ref|XP_005856369.1| (ku p70 dna, partial [Nannochloropsis gaditana CCMP526] >gi|422292694|gb|EKU19996.1| ku p70 dna, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 244.202 bits (622), Expect = 1.704e-74 Identity = 117/118 (99.15%), Postives = 118/118 (100.00%), Query Frame = 0
Query: 461 LIVLPFLDDLRAIESPHLESLPALPSMDQKEAAKSVISRLAMRWEEYYQGYSNPGLQKFYAGLQALALEQSEVDWNESADDRTWPDEKELLGRTGEAMRGLWESSRDPDKVLNGGSSG 578
+IVLPFLDDLRAIESPHLESLPALPSMDQKEAAKSVISRLAMRWEEYYQGYSNPGLQKFYAGLQALALEQSEVDWNESADDRTWPDEKELLGRTGEAMRGLWESSRDPDKVLNGGSSG
Sbjct: 1 MIVLPFLDDLRAIESPHLESLPALPSMDQKEAAKSVISRLAMRWEEYYQGYSNPGLQKFYAGLQALALEQSEVDWNESADDRTWPDEKELLGRTGEAMRGLWESSRDPDKVLNGGSSG 118
BLAST of EWM28192.1 vs. NCBI_GenBank
Match: gi|695397520|ref|XP_009521762.1| (hypothetical protein PHYSODRAFT_484094 [Phytophthora sojae] >gi|348686659|gb|EGZ26474.1| hypothetical protein PHYSODRAFT_484094 [Phytophthora sojae]) HSP 1 Score: 185.267 bits (469), Expect = 7.861e-47 Identity = 180/654 (27.52%), Postives = 286/654 (43.73%), Query Frame = 0
Query: 27 EDNLMVLIDARPPMLV------ENVQGTVPLVTALGIIHHVLKRKIMINQRDHVGILLFGAEAVDEKGEIVGSGNAKFSDMSRMSQVWGNQVHELQTLGQPTAKRIKQIERLCHEDTNIMNGLCLKHAQKLPGSSTSAALRDGLRACLRMLEGQSRKELDSRRIWLFTNEDDPS-----QVNDPSQVIKDAREGGVEMWVWHFPAQDGREFNRNKFYEPLLAAPTRFVQDGYKIADEKDPGYCTKMIDAGSGDVNSLLLGARTPLFKKRRYVRTKLHISVDPPISLDVAFYKTIQRCRKPMPVKLAAVSNRRLATSTKWMCEDLVQYVDPELDVACGLEFGKGGVTIPLHSAAYEMKQRVCQRDPGLHLLAFLPAEELAWELNVTSSTLIYPEEMALKGCTRAFSAIRKAMLQQHKMALVRLHINAVSYPRLAVL---------LAPPATPGLELIVLPFLDDLRAIESPHLESLPALPSMDQKEAAKSVISRLAMRWEEYYQGYSNPGLQKFYAGLQALALEQSEVDWNESADDRTWPDEKELLGRTGEAMRGLWESSRDPDKVLNGGSSGKRKSTVAGVDRLLSLKKEKREVKDSGKAEKGHHDSVKSEFEAFEGAQTREGLSKLTVRKLKDLCQELKLHVSGRKDDLIDRL 660
+D L+VL+D R M E + + ++ +LK K++ N + ++ FG E G + QV+ELQ LG P+A+RIK ++ L D ++++ KL + + L C + K+ DS+RIW+FTN+D P +V + +++ E + +++ F+ +KFY + F D + E + Y G ++ L+ G+ F+KRR LHI+ +S+ V Y + RK PV L A +N L T TKW+CED Y+ P+ + +++G V E+K PGL L+ F P L W N+ S +YP + ++G + AF AI +M++++K AL RL S PRL L + GL +I LP+LDD+R I P P ++ +AAK +IS L + ++ NP LQK YA +QALAL++ + ++E A D T PD E G+ +A+ E V G + + + KR+V +GK E G K E+ A + + K T+ +LK L GRK DL+D +
Sbjct: 28 KDALIVLLDVRKVMFTPYPHADEAKAPSTWFHAVVELVIKLLKSKVVANDNSQLSVVFFGTNKRGEAGTL-------------------EQVYELQPLGYPSAQRIKDLQALLEADVQ-AEYESMENSDKL-------SFSNALWQCGISFSNANLKKKDSQRIWIFTNDDSPQGPDGEEVGRIQKQVQNHTELKRTLNLFYITPPGKESFDLSKFYG---CSFKDFSADANEEVVENEASYQPAF---PVGSLDDLMDGSLRKRFRKRRLTAFPLHIT--KGVSIGVELYALVVVQRKNTPVALDASTNTPLKTETKWLCEDTGAYLTPD-QIKKYIDYGGKRVYF-TRDDVVEIKHYDA---PGLQLICFKPLSSLKWNENIRSPYFVYPCDGYIEGSSTAFMAILNSMVRKNKFALARLIARKTSEPRLVALVPQEEENDEMGQVQPSGLNVIFLPYLDDIRDI--------PVDP--EKIDAAKHLISTLKLTEAPSFE---NPELQKHYAAIQALALDEEVLQFDE-AKDTTLPD-AEGFGQDEDAITAFRE--------------------VCGGELIDASTNAKRKVTKAGKPEAGETFD-KEEWAALVASN---AIQKKTIPQLKAFLHAHGLAAVGRKADLVDAV 602
BLAST of EWM28192.1 vs. NCBI_GenBank
Match: gi|1173959255|gb|OQS05508.1| (ATP-dependent DNA helicase 2 subunit [Thraustotheca clavata]) HSP 1 Score: 182.185 bits (461), Expect = 9.544e-46 Identity = 171/652 (26.23%), Postives = 282/652 (43.25%), Query Frame = 0
Query: 30 LMVLIDARPPMLVENVQGTVPLVTALGIIHHVLKRKIMINQRDHVGILLFGAEAVDEKGEIVGSGNAKFSDMSRMSQVWGNQVHELQTLGQPTAKRIKQIERLCHEDTNIMNGLCLKHAQKLPGSSTSAALRDGLRACLRMLEGQSRKELDSRRIWLFTNEDDPSQVN--DPSQVIK---DAREGGVEMWVWHFPAQDGREFNRNKFYEPLLAAPTRFVQDGYKIADEKDPGYCTKMIDAGSGDVNSLLLGARTPLFKKRRYVRTKLHISVDPPISLDVAFYKTIQRCRKPMPVKLAAVSNRRLATSTKWMCEDLVQYVDPELDVACGLEFGKGGVTIPLHSAAYEMKQRVCQRDPGLHLLAFLPAEELAWELNVTSSTLIYPEEMALKGCTRAFSAIRKAMLQQHKMALVRLHINAVSYPRLAVLLAPPAT---------PGLELIVLPFLDDLRAIESPHLESLPALPSMDQKEAAKSVISRLAMRWEEYYQGYSNPGLQKFYAGLQALALEQSEVDWNESADDRTWPDEKELLGRTGEAMRGLWESSRDPDKVLNGG-----SSGKRKSTVAGVDRLLSLKKEKREVKDSGKAEKGHHDSVKSEFEAFEGAQTREGLSKLTVRKLKDLCQELKLHVSGRKDDLIDRLLS 662
L+VL+D R + G T + ++ +LK KI+ N +GI+ FG + V+E Q LG P+A RIKQ+ L D G S+ +L + L + K+ DS+ IW+ TN +DP+ N + +V+K + E + +++ P F+ + FY + T QD P Y + + + R+ T L ++ I++ V Y + KP P+ L A +N L T TKW+C++ Y+ PE V +E+GK V + ++ +M + GL LL F P L N+ + IYP E ++G T AF A+ ++M+++ MA+ RL + + PRL ++ G LI LP++DD+R + + H P++DQ +AAK VI L ++ +Q NP LQK YA +QALAL +S + +++ DD T PD ++G + ES R+ L GG + KRK++ G K +K+ K H+ V ++ ++ ++K TV +LK SG+KD+L++R ++
Sbjct: 27 LLVLLDVRSSLFTPLEDGNTWFNTCVEMLVKLLKSKIIANDNSLMGIIFFGTSQTKNVNSL-------------------EHVYEFQELGFPSAHRIKQLRELMTVDFAKEYGSM--------ASNDQVSLSNALWHAGIAFSNANLKKKDSQTIWILTNNEDPTIGNAEECERVLKQFTNHMELKRSIQLFYMPPPAKESFSLSSFYSRMFMEATMLAQDDLSTLQ---PAYAIHTYQE---------MMEESLRKRFRKRRLTTLSWTIAKGIAIGVELYALTVKQAKPSPINLEAETNSILKTETKWLCDETGMYLTPE-QVKKYIEYGKQRV----YFSSDDMVELKYFDAAGLQLLGFQPKSLLKDHENLRAPYFIYPAEGYIEGSTVAFVALLQSMVKKDVMAIARLIVRKNTPPRLVAIVPQEEIYDDQGQIQPSGFNLIFLPYVDDVRNLRADHNSQRD--PTLDQVDAAKKVIQSLTIKEVPSFQ---NPELQKHYASIQALALNESSLAFDDK-DDTTLPD---VVGFKRNKVVSALESFRE----LCGGDELAKDNAKRKASTPGG------KGDKKAAK--------HNADVSTDLATWKKLAASGVVAKKTVVELKAFLSAHGQSTSGKKDELVNRAMA 607
BLAST of EWM28192.1 vs. NCBI_GenBank
Match: gi|700422827|ref|XP_009949739.1| (PREDICTED: X-ray repair cross-complementing protein 6, partial [Leptosomus discolor]) HSP 1 Score: 176.792 bits (447), Expect = 5.921e-44 Identity = 171/651 (26.27%), Postives = 282/651 (43.32%), Query Frame = 0
Query: 28 DNLMVLIDARPPMLVENVQGTVPLVTALGIIHHVLKRKIMINQRDHVGILLFGAEAVDEKGEIVGSGNAKFSDMSRMSQVWGNQVHELQTLGQPTAKRIKQIERLCHEDTNIMNGLCLKHAQKLPGSSTSAALRDGLRACLRMLEGQSRKELDSRRIWLFTNEDDPSQVNDPSQV------IKDAREGGVEMWVWHFPAQDGREFNRNKFYEPLLAAPTRFVQDGYKIADEKDPGYCTKMIDAGSGDVNSLLLGARTPLFKKRRYVRTKLHISVDPPISLDVAFYKTIQRCRKPMPVKLAAVSNRRLATSTKWMCEDLVQYVDPELDVACGLEFGKGGVTIPLHSAAYEMKQRVCQRD-PGLHLLAFLPAEELAWELNVTSSTLIYPEEMALKGCTRAFSAIRKAMLQQHKMALVRLHINAVSYPRLAVLLAPP----------ATPGLELIVLPFLDDLRAIESPHLESLPALPSMDQKEAAKSVISRLAMRWEEYYQGYSNPGLQKFYAGLQALALEQSEVDWNESADDRTWPDEKELLGRTGEAMRGLWESSRDPDKVLNGGSSGKRKSTVAGVDRLLSLKKEKREVKDSGKAEKGHHDSVKSEFEAFEGAQTREGLSKLTVRKLKDLCQELKLHVSGRKDDLIDRLL 661
D+L+ L+DA M + G P + I +V KI+ + RD + ++ +G E +A F V+ LQ L P AKR+ ++++ ++ ++ +K G + +L + L AC + R L +RI LFTNEDDP ND ++ D R+ G+ + + H G F+ + FY +D IA+++D G + S + L+ R KKR VR L+++ D +SL V Y +Q+ KP PVKL +N + T T+ + P D +G + + E + + + D PGL L+ F P L ++ S IYPEE + G T F+A+ L++ MAL R + PR L+ A PG +I LP+ DD+R ++ E +PA S +Q + K +I +L ++ + NP LQ+ + L+ALAL++ E E A+D T P +E+ R G + E PD +G + +++++ ++ ++ K E++ +KG L KLTV LKD C+ L G+K +L+D L+
Sbjct: 22 DSLIFLVDASKAMFESDGDGVTPFDMTVQCIRNVYTSKIISSDRDLLSVVFYGTEK--------NKNSADFK-----------HVYVLQELDNPGAKRVLELDQYRGDEGQVL-------FRKTFGHNADYSLGEALWACSNLF-SDVRVRLSHKRIMLFTNEDDP-HANDSAKAKLARTRAGDLRDTGIILDLMHLKKPGG--FDISLFY-----------RDIINIAEDEDLGVQPE----ESVKLEHLMKKVRAKETKKRTLVRLNLYLNKD--LSLAVGVYNLVQKAHKPFPVKLYRETNEPVKTKTRMFNGKTGSLLLPS-DTKRAQTYGNRQIVL-----EKEETEEIKRFDSPGLFLIGFKPLSMLKQHHHIKPSQFIYPEESLVNGSTTLFNALLIKCLEREVMALCRYTTRRNTPPRFVALVPQEEEVDEQKVQIAPPGFHIIFLPYADDIRNVD--FTEKVPA--SQEQVDKMKEIIQKLRFKYRT--DSFENPVLQQHFRNLEALALDEME---PEKAEDLTMPKSEEMNRRLGNLVEEFKELVYPPDYNPDGMAVKRKQASDNQTEKRPKVEVSKDELR--SHVQKG-------------------TLGKLTVPVLKDACRIYGLKGGGKKQELMDVLM 589
BLAST of EWM28192.1 vs. NCBI_GenBank
Match: gi|695145457|ref|XP_009500118.1| (PREDICTED: X-ray repair cross-complementing protein 6, partial [Phalacrocorax carbo]) HSP 1 Score: 175.637 bits (444), Expect = 1.109e-43 Identity = 170/649 (26.19%), Postives = 277/649 (42.68%), Query Frame = 0
Query: 28 DNLMVLIDARPPMLVENVQGTVPLVTALGIIHHVLKRKIMINQRDHVGILLFGAEAVDEKGEIVGSGNAKFSDMSRMSQVWGNQVHELQTLGQPTAKRIKQIERLCHEDTNIMNGLCLKHAQKLPGSSTSAALRDGLRACLRMLEGQSRKELDSRRIWLFTNEDDPSQVNDPSQV------IKDAREGGVEMWVWHFPAQDGREFNRNKFYEPLLAAPTRFVQDGYKIADEKDPGYCTKMIDAGSGDVNSLLLGARTPLFKKRRYVRTKLHISVDPPISLDVAFYKTIQRCRKPMPVKLAAVSNRRLATSTKWMCEDLVQYVDPELDVACGLEFGKGGVTIPLHSAAYEMKQRVCQRDPGLHLLAFLPAEELAWELNVTSSTLIYPEEMALKGCTRAFSAIRKAMLQQHKMALVRLHINAVSYPRLAVLL----------APPATPGLELIVLPFLDDLRAIESPHLESLPALPSMDQKEAAKSVISRLAMRWEEYYQGYSNPGLQKFYAGLQALALEQSEVDWNESADDRTWPDEKELLGRTGEAMRGLWESSRDPDKVLNGGSSGKRKSTVAGVDRLLSLKKEKREVKDSGKAEKGHHDSVKSEFEAFEGAQTREGLSKLTVRKLKDLCQELKLHVSGRKDDLIDRL 660
D+L+ L+DA M + G P + I V KI+ + RD + ++ +G E + + ++ LQ L P AKR+ +++R ++ I+ ++ G + +L + L AC + R L +RI LFTNED+P ND ++ D R+ G+ + + H G F+ + FY +D IA+++D G + SG + L+ R KKR VR L++S D +SL V Y IQ+ KP PVKL +N + T T+ + P D +G + + + PGL L+ F P L ++ S IYPEE + G T F+A+ L++ MAL R + PR L+ A PG +I LP+ DD R ++ E +PA S +Q + K +I +L ++ + NP LQ+ + L+ALAL+ E E A+D T P +E+ R G + E PD +G ++ +++ + + K+ K E+ + D ++S + + L KLTV LKD C+ +L G+K +L+D L
Sbjct: 9 DSLIFLVDASEAMFESDGDGVTPFDMTIQCIRSVYTSKIISSDRDLLSVVFYGTEKNKNQADF-------------------KHIYVLQELDNPGAKRVLELDRYRGDEGQIL-------FRETFGHNADYSLGEALWACSNLF-SDVRVRLSHKRIMLFTNEDNP-HANDSAKAKLARTRAGDLRDTGIILDLMHLKKPGG--FDISLFY-----------RDIINIAEDEDLG----IQPEESGKLEHLMKNVRAKETKKRTLVRLNLYLSKD--LSLSVGVYNLIQKAYKPYPVKLYRETNEPVKTKTRMFNGKTGSLLLPS-DTKRAQTYGNRQIVLEKEETEELKRFD----SPGLFLIGFKPLSMLKQHHHMKPSQFIYPEESLVSGSTTLFNALLMKCLEREVMALCRYTARRNTPPRFVALVPQEEEVDEQKVQVAPPGFHIIFLPYADDKRNVD--FTEKVPA--SQEQVDKMKEIIQKLRFKYRT--DSFENPVLQQHFRNLEALALDMME---PEQAEDLTMPKVEEMNRRLGNLVEEFKELVYAPDYSPDGNAAKRKQPSDWQTE-----KRPKVEISE---------DELRSHVQ-------KGTLGKLTVPVLKDACRFYRLRGGGKKQELMDAL 575
BLAST of EWM28192.1 vs. NCBI_GenBank
Match: gi|699671329|ref|XP_009900754.1| (PREDICTED: X-ray repair cross-complementing protein 6 isoform X1 [Picoides pubescens]) HSP 1 Score: 176.022 bits (445), Expect = 1.169e-43 Identity = 181/650 (27.85%), Postives = 278/650 (42.77%), Query Frame = 0
Query: 28 DNLMVLIDARPPMLVENVQGTVPLVTALGIIHHVLKRKIMINQRDHVGILLFGAEAVDEKGEIVGSGNAKFSDMSRMSQVWGNQVHELQTLGQPTAKRIKQIERLCHEDTNIMNGLCLKHAQKLPGSSTSAALRDGLRACLRMLEGQSRKELDSRRIWLFTNEDDPSQVNDPSQV------IKDAREGGVEMWVWHFPAQDGREFNRNKFYEPLLAAPTRFVQDGYKIADEKDPGYCTKMIDAGSGDVNSLLLGARTPLFKKRRYVRTKLHISVDPPISLDVAFYKTIQRCRKPMPVKLAAVSNRRLATSTKWMCEDLVQYVDPELDVACGLEFGKGGVTIPLHSAAYEMKQRVCQRDP-GLHLLAFLPAEELAWELNVTSSTLIYPEEMALKGCTRAFSAIRKAMLQQHKMALVRLHINAVSYPRLAVLLAPP----------ATPGLELIVLPFLDDLRAIESPHLESLPALPSMDQKEAAKSVISRLAMRWEEYYQGYSNPGLQKFYAGLQALALEQSEVDWNESADDRTWPDEKELLGRTGEAMRGLWESSRDPDKVLNGGSSGKRKSTVAGVDRLLSLKKEKREVKDSGKAEKGHHDSVKSEFEAFEGAQTREGLSKLTVRKLKDLCQELKLHVSGRKDDLIDRL 660
D+L+ L+DA M + +G P + I +V KI+ + +D + ++ +G E +A F V+ LQ L P AKR+ ++++ ++ G L H G + +L + L AC + R L +RI LFTNEDDP ND ++ D R+ G+ + + H G F+ + FY +D +A+++D G K S + L+ R KKR VR L++S D +SL VA Y IQ+ KP PVKL +N + T T+ + P D +G + E + + Q DP GL L+ F P L ++ S IYPEE + G T F+A+ L++ MAL R + PR L+ PG +I LP+ DD R ++ E +PA S Q + K +I +L ++ G+ NP LQ+ + L+ALAL+ E E A+D T P +E+ R G + + PD +G + KRK T G + K+ K EV + E + + L KLTV LKD C+ L+ G+K +L+D L
Sbjct: 39 DSLIFLVDASKAMFESDEEGMTPFEMTIQCIRNVYTSKIISSDKDLLSVVFYGTEN--------SKNSADFK-----------HVYVLQDLDNPGAKRVLELDQYGGDE-----GQALFHDTF--GHNADYSLGEALWACSNLF-SDVRVRLSHKRIMLFTNEDDP-HANDSAKAKLARTRAGDLRDTGIILDLMHLKKPGG--FDISLFY-----------RDIINLAEDEDLGIQPK----ESEKLEHLMKKVRAKQTKKRAMVRLNLYLSKD--LSLSVAVYNLIQKAYKPYPVKLYRETNEPVKTKTRTFSSQTGSLLLPS-DTKRAQTYGNRQIV-----LEKEETEELKQFDPPGLFLIGFKPLSMLKHHHHIKHSQFIYPEESLVSGSTTLFNALLMKCLEREVMALCRYTARRNTPPRFVALVPQEEELDEQKVQITPPGFHVIFLPYADDKRKVDC--TEKVPA--SRMQVDKMKEIIQKLRFKYRT--DGFENPVLQQHFRNLEALALDMME---PEQAEDLTMPKVEEMNRRLGNLVEEFKQLVYPPDYNPDGKAV-KRKQTSDGQ----TEKRPKVEVSE----------------EELQSHVQKGTLGKLTVSTLKDACRLYGLNDGGKKQELMDAL 605
BLAST of EWM28192.1 vs. NCBI_GenBank
Match: gi|675174031|ref|XP_008895900.1| (hypothetical protein, variant 1 [Phytophthora parasitica INRA-310] >gi|566013497|gb|ETI36408.1| hypothetical protein, variant 1 [Phytophthora parasitica P1569] >gi|568009126|gb|ETL83337.1| hypothetical protein, variant 1 [Phytophthora parasitica] >gi|568103537|gb|ETN18194.1| hypothetical protein, variant 1 [Phytophthora parasitica INRA-310] >gi|570317224|gb|ETO65172.1| hypothetical protein, variant 1 [Phytophthora parasitica P1976] >gi|570941017|gb|ETP06274.1| hypothetical protein, variant 1 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 175.252 bits (443), Expect = 3.048e-43 Identity = 179/661 (27.08%), Postives = 290/661 (43.87%), Query Frame = 0
Query: 27 EDNLMVLIDARPPMLVENVQGTVP-----LVTALGIIHHVLKRKIMINQRDHVGILLFGAEAVDEKGEIVGSGNAKFSDMSRMSQVWGNQVHELQTLGQPTAKRIKQIERLCHEDTNIMNGLCLKHAQKLPGSSTSAALRDGLRACLRMLEGQSRKELDSRRIWLFTNEDDPS-----QVNDPSQVIKDAREGGVEMWVWHFPAQDGREFNRNKFYEPLLAAPTRFVQDGYKIADEKDPGYCTKMIDAGSGDVNSLLLGARTPLFKKRRYVRTKLHISVDPPISLDVAFYKTIQRCRKPMPVKLAAVSNRRLATSTKWMCEDLVQYVDPELDVACGLEFGKGGVTIPLHSAAYEMKQRVCQRDPGLHLLAFLPAEELAWELNVTSSTLIYPEEMALKGCTRAFSAIRKAMLQQHKMALVRLHINAVSYPRLAVL---------LAPPATPGLELIVLPFLDDLRAIESPHLESLPALPSM--DQK--EAAKSVISRLAMRWEEYYQGYSNPGLQKFYAGLQALALEQSEVDWNESADDRTWPDEKELLGRTGEAMRGLWESSRDP--DKVLNGGSSGKRKSTVAGVDRLLSLKKEKREVKDSGKAEKGHHDSVKSEFEAFEGAQTREGLSKLTVRKLKDLCQELKLHVSGRKDDLIDRLLS 662
+D L+VL+D R M T + ++ +LK K++ N + ++ FG E G + QV+E Q LG P+A+RIK ++ L D ++++ KL + + L C + K+ DS+RIW+FTN+D P +V + +++ E + +++ F+ KFY F + +E T ++ L+ G+ F+KRR LHI+ +S+ V Y + RK PV L A +N L T TKW+CED Y+ P+ + +++G V E+K PGL L+ F P L W N+ S +YP + ++G + AF AI +M+++ K AL RL S PRL L + G +I LP+LDD+R + P P M DQ+ +AAK +IS+L + ++ NP LQK YA +QALAL + ++++E+ D T PD G + E ++ + RD +++ ++ KRKS+ +G + + K K + + K E K+E+ A + + K TV +LK L GRK +LID + S
Sbjct: 30 KDALIVLLDVRKAMFSPYPHATAEAPSTWFHAVVELVIKLLKSKVVANDNSLLSVVFFGTNKRGEAGAL-------------------EQVYEFQPLGFPSAQRIKDLQALLEADIQ-SEFESMQNSDKL-------SFSNALWQCGISFSNANLKKKDSQRIWIFTNDDSPEGPDAEEVGRIQKQVQNHTELKRTLNLFYITPPGKENFDLAKFYG------CNFKDFSAEEDEENVEDEATFQPAFPVSSLDDLMDGSLRKRFRKRRLTTFPLHIT--KGVSIGVELYALVVVQRKNTPVALDASTNTPLKTETKWLCEDTGAYLTPD-QIKKYIDYGGKRVYF-TRDDVVEIKHYDA---PGLQLICFKPLNSLKWNENIRSPYFVYPCDGYIEGSSTAFMAILNSMVRKQKFALARLIARKTSEPRLVALVPQEEENDEMGQVQPSGFNVIFLPYLDDIRDV--------PVDPVMNVDQEKIKAAKQLISKLKLTEAPSFE---NPELQKHYAAIQALALNEEALEFDENK-DTTLPDAD---GFSQEEVKDAITNFRDVCGGDLIDVSTAAKRKSSASGGRKSTTKKTAKAKAGSANKPE-AEETFDKNEWAALVASNV---IQKKTVAQLKAFLHAHGLAAVGRKAELIDAVKS 631
BLAST of EWM28192.1 vs. NCBI_GenBank
Match: gi|570971234|gb|ETP34353.1| (hypothetical protein, variant 1 [Phytophthora parasitica P10297]) HSP 1 Score: 175.252 bits (443), Expect = 3.138e-43 Identity = 179/661 (27.08%), Postives = 290/661 (43.87%), Query Frame = 0
Query: 27 EDNLMVLIDARPPMLVENVQGTVP-----LVTALGIIHHVLKRKIMINQRDHVGILLFGAEAVDEKGEIVGSGNAKFSDMSRMSQVWGNQVHELQTLGQPTAKRIKQIERLCHEDTNIMNGLCLKHAQKLPGSSTSAALRDGLRACLRMLEGQSRKELDSRRIWLFTNEDDPS-----QVNDPSQVIKDAREGGVEMWVWHFPAQDGREFNRNKFYEPLLAAPTRFVQDGYKIADEKDPGYCTKMIDAGSGDVNSLLLGARTPLFKKRRYVRTKLHISVDPPISLDVAFYKTIQRCRKPMPVKLAAVSNRRLATSTKWMCEDLVQYVDPELDVACGLEFGKGGVTIPLHSAAYEMKQRVCQRDPGLHLLAFLPAEELAWELNVTSSTLIYPEEMALKGCTRAFSAIRKAMLQQHKMALVRLHINAVSYPRLAVL---------LAPPATPGLELIVLPFLDDLRAIESPHLESLPALPSM--DQK--EAAKSVISRLAMRWEEYYQGYSNPGLQKFYAGLQALALEQSEVDWNESADDRTWPDEKELLGRTGEAMRGLWESSRD--PDKVLNGGSSGKRKSTVAGVDRLLSLKKEKREVKDSGKAEKGHHDSVKSEFEAFEGAQTREGLSKLTVRKLKDLCQELKLHVSGRKDDLIDRLLS 662
+D L+VL+D R M T + ++ +LK K++ N + ++ FG E G + QV+E Q LG P+A+RIK ++ L D ++++ KL + + L C + K+ DS+RIW+FTN+D P +V + +++ E + +++ F+ KFY F + +E T ++ L+ G+ F+KRR LHI+ +S+ V Y + RK PV L A +N L T TKW+CED Y+ P+ + +++G V E+K PGL L+ F P L W N+ S +YP + ++G + AF AI +M+++ K AL RL S PRL L + G +I LP+LDD+R + P P M DQ+ +AAK +IS+L + ++ NP LQK YA +QALAL + ++++E+ D T PD G + E ++ + RD +++ ++ KRKS+ +G + + K K + + K E K+E+ A + + K TV +LK L GRK +LID + S
Sbjct: 30 KDALIVLLDVRKAMFSPYPHATAEAPSTWFHAVVELVIKLLKSKVVANDNSLLSVVFFGTNKRGEAGAL-------------------EQVYEFQPLGFPSAQRIKDLQALLEADIQ-SEFESMQNSDKL-------SFSNALWQCGISFSNANLKKKDSQRIWIFTNDDSPEGPDAEEVGRIQKQVQNHTELKRTLNLFYITPPGKENFDLAKFYG------CNFKDFSAEEDEENVEDEATFQPAFPVSSLDDLMDGSLRKRFRKRRLTTFPLHIT--KGVSIGVELYALVVVQRKNTPVALDASTNTPLKTETKWLCEDTGAYLTPD-QIKKYIDYGGKRVYF-TRDDVVEIKHYDA---PGLQLICFKPLNSLKWNENIRSPYFVYPCDGYIEGSSTAFMAILNSMVRKQKFALARLIARKTSEPRLVALVPQEEENDEMGQVQPSGFNVIFLPYLDDIRDV--------PVDPVMNVDQEKIKAAKQLISKLKLTEAPSFE---NPELQKHYAAIQALALNEEALEFDENK-DTTLPDAD---GFSQEEVKDAITNFRDVCGGDLIDVSTAAKRKSSASGGRKSTTKKTAKAKAGSANKPE-AEETFDKNEWAALVASN---AIQKKTVAQLKAFLHAHGLAAVGRKAELIDAVKS 631
BLAST of EWM28192.1 vs. NCBI_GenBank
Match: gi|567950975|gb|ETK76682.1| (hypothetical protein, variant 1 [Phytophthora parasitica] >gi|567979639|gb|ETL30115.1| hypothetical protein, variant 1 [Phytophthora parasitica]) HSP 1 Score: 175.252 bits (443), Expect = 3.664e-43 Identity = 179/661 (27.08%), Postives = 290/661 (43.87%), Query Frame = 0
Query: 27 EDNLMVLIDARPPMLVENVQGTVP-----LVTALGIIHHVLKRKIMINQRDHVGILLFGAEAVDEKGEIVGSGNAKFSDMSRMSQVWGNQVHELQTLGQPTAKRIKQIERLCHEDTNIMNGLCLKHAQKLPGSSTSAALRDGLRACLRMLEGQSRKELDSRRIWLFTNEDDPS-----QVNDPSQVIKDAREGGVEMWVWHFPAQDGREFNRNKFYEPLLAAPTRFVQDGYKIADEKDPGYCTKMIDAGSGDVNSLLLGARTPLFKKRRYVRTKLHISVDPPISLDVAFYKTIQRCRKPMPVKLAAVSNRRLATSTKWMCEDLVQYVDPELDVACGLEFGKGGVTIPLHSAAYEMKQRVCQRDPGLHLLAFLPAEELAWELNVTSSTLIYPEEMALKGCTRAFSAIRKAMLQQHKMALVRLHINAVSYPRLAVL---------LAPPATPGLELIVLPFLDDLRAIESPHLESLPALPSM--DQK--EAAKSVISRLAMRWEEYYQGYSNPGLQKFYAGLQALALEQSEVDWNESADDRTWPDEKELLGRTGEAMRGLWESSRDP--DKVLNGGSSGKRKSTVAGVDRLLSLKKEKREVKDSGKAEKGHHDSVKSEFEAFEGAQTREGLSKLTVRKLKDLCQELKLHVSGRKDDLIDRLLS 662
+D L+VL+D R M T + ++ +LK K++ N + ++ FG E G + QV+E Q LG P+A+RIK ++ L D ++++ KL + + L C + K+ DS+RIW+FTN+D P +V + +++ E + +++ F+ KFY F + +E T ++ L+ G+ F+KRR LHI+ +S+ V Y + RK PV L A +N L T TKW+CED Y+ P+ + +++G V E+K PGL L+ F P L W N+ S +YP + ++G + AF AI +M+++ K AL RL S PRL L + G +I LP+LDD+R + P P M DQ+ +AAK +IS+L + ++ NP LQK YA +QALAL + ++++E+ D T PD G + E ++ + RD +++ ++ KRKS+ +G + + K K + + K E K+E+ A + + K TV +LK L GRK +LID + S
Sbjct: 30 KDALIVLLDVRKAMFSPYPHATAEAPSTWFHAVVELVIKLLKSKVVANDNSLLSVVFFGTNKRGEAGAL-------------------EQVYEFQPLGFPSAQRIKDLQALLEADIQ-SEFESMQNSDKL-------SFSNALWQCGISFSNANLKKKDSQRIWIFTNDDSPEGPDAEEVGRIQKQVQNHTELKRTLNLFYITPPGKENFDLAKFYG------CNFKDFSAEEDEENVEDEATFQPAFPVSSLDDLMDGSLRKRFRKRRLTTFPLHIT--KGVSIGVELYALVVVQRKNTPVALDASTNTPLKTETKWLCEDTGAYLTPD-QIKKYIDYGGKRVYF-TRDDVVEIKHYDA---PGLQLICFKPLNSLKWNENIRSPYFVYPCDGYIEGSSTAFMAILNSMVRKQKFALARLIARKTSEPRLVALVPQEEENDEMGQVQPSGFNVIFLPYLDDIRDV--------PVDPVMNVDQEKIKAAKQLISKLRLTEAPSFE---NPELQKHYAAIQALALNEEALEFDENK-DTTLPDAD---GFSQEEVKDAITNFRDVCGGDLIDVSTAAKRKSSASGGRKSTTKKTAKAKAGSANKPE-AEETFDKNEWAALVASNV---IQKKTVAQLKAFLHAHGLAAVGRKAELIDAVKS 631 The following BLAST results are available for this feature:
BLAST of EWM28192.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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