EWM28292.1, cds2492 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28292.1 vs. NCBI_GenBank
Match: gi|585110637|gb|EWM28292.1| (THUMP domain-containing protein [Nannochloropsis gaditana]) HSP 1 Score: 399.053 bits (1024), Expect = 1.274e-140 Identity = 197/197 (100.00%), Postives = 197/197 (100.00%), Query Frame = 0 Query: 1 MVPIETGCRGTCGVSIPKDGPLSPVKACIRMLEEAKTGQSSTRGIIKLMPLERICFGGNLEALKREARDLLLEKGLIVEKEEHAEKASGQIGLESERKAVDSSSRPTYMVSLCRRNYAAHSRDEIFKTLGDVIGGRWKVDLTCPDYVLLVEAIKGTIGVGICPRFIELKKYNLRQLQDEARKEDQALQGKIRAEKRE 197 MVPIETGCRGTCGVSIPKDGPLSPVKACIRMLEEAKTGQSSTRGIIKLMPLERICFGGNLEALKREARDLLLEKGLIVEKEEHAEKASGQIGLESERKAVDSSSRPTYMVSLCRRNYAAHSRDEIFKTLGDVIGGRWKVDLTCPDYVLLVEAIKGTIGVGICPRFIELKKYNLRQLQDEARKEDQALQGKIRAEKRE Sbjct: 1 MVPIETGCRGTCGVSIPKDGPLSPVKACIRMLEEAKTGQSSTRGIIKLMPLERICFGGNLEALKREARDLLLEKGLIVEKEEHAEKASGQIGLESERKAVDSSSRPTYMVSLCRRNYAAHSRDEIFKTLGDVIGGRWKVDLTCPDYVLLVEAIKGTIGVGICPRFIELKKYNLRQLQDEARKEDQALQGKIRAEKRE 197
BLAST of EWM28292.1 vs. NCBI_GenBank
Match: gi|1214665174|gb|OWY93016.1| (hypothetical protein PHMEG_00037736 [Phytophthora megakarya]) HSP 1 Score: 73.9442 bits (180), Expect = 3.363e-12 Identity = 50/180 (27.78%), Postives = 88/180 (48.89%), Query Frame = 0 Query: 1 MVPIETGCRGTCGVSIPKDGPLSPVKACIRMLEEAK-TGQSSTRGIIKLMPLERICFGGNLEALKREARDLLLEKGLIVEKEEHAEKASGQIGLESERKAVDSSSRPTYMVSLCRRNYAAHSRDEIFKTLGDVIG-GRWKVDLTCPDYVLLVEAIKGTIGVGICPRFIELKKYNLRQLQD 178 ++TG +G + KD +SP ++ EE + T ++R I +++PLE++ + ++EA+K A ++ +EH E + E+KA D + V RRN R + ++ +++G + KV+LT P VL+VE + T G + F KKYN+R + D Sbjct: 109 FTALDTGVKGAILIQF-KDSNVSPTALMNKIFEEVESTKDFASRFIQRMIPLEKVGYS-SVEAIKELAAPMV---------KEHLE------AFKEEQKAADKDGDFEFAVEFNRRNCTNLDRMSVINSIVELVGEDKTKVNLTTPRSVLMVEVFRNTCGFSVLTEFHRFKKYNVRSIID 271
BLAST of EWM28292.1 vs. NCBI_GenBank
Match: gi|1214689681|gb|OWZ05173.1| (hypothetical protein PHMEG_00022781 [Phytophthora megakarya]) HSP 1 Score: 73.559 bits (179), Expect = 3.936e-12 Identity = 50/180 (27.78%), Postives = 88/180 (48.89%), Query Frame = 0 Query: 1 MVPIETGCRGTCGVSIPKDGPLSPVKACIRMLEEAK-TGQSSTRGIIKLMPLERICFGGNLEALKREARDLLLEKGLIVEKEEHAEKASGQIGLESERKAVDSSSRPTYMVSLCRRNYAAHSRDEIFKTLGDVIG-GRWKVDLTCPDYVLLVEAIKGTIGVGICPRFIELKKYNLRQLQD 178 ++TG +G + KD +SP ++ EE + T ++R I +++PLE++ + ++EA+K A ++ +EH E + E+KA D + V RRN R + ++ +++G + KV+LT P VL+VE + T G + F KKYN+R + D Sbjct: 109 FTALDTGVKGAILIQF-KDSNVSPTALMNKIFEEVESTKDFASRFIQRMIPLEKVGYS-SVEAIKELAAPMV---------KEHLE------AFKEEQKAADKDGDFEFAVEFNRRNCTNLDRMSVINSIVELVGEDKTKVNLTTPRSVLMVEVFRNTCGFSVLTEFHRFKKYNVRSIID 271
BLAST of EWM28292.1 vs. NCBI_GenBank
Match: gi|1069594184|ref|XP_018170198.1| (hypothetical protein QG37_02506 [[Candida] auris] >gi|908570918|gb|KNE00475.1| hypothetical protein QG37_02506 [[Candida] auris]) HSP 1 Score: 72.7886 bits (177), Expect = 6.512e-12 Identity = 52/189 (27.51%), Postives = 92/189 (48.68%), Query Frame = 0 Query: 1 MVPIETGCRGTCGVSIPKDGPLSPVKACIRMLEEA-KTGQSSTRGIIKLMPLERICFGGNLEALKREARDLLLEKGLIVEKEEHAEKASGQIGLESERKAVDSSSRPTYMVSLCRRNYAAHSRDEIFKTLGDVIGGRW--KVDLTCPDYVLLVEAIKGTIGVGICPRFIELKKYNLRQLQDEARKEDQA 186 +PI+ GC C V I P+ P + R+ +EA + + TR KL P+ +++ LK+ A +L E H + GQ L+ + + + RRN+ +D+I KT+ +G + KVDL D ++LVE K +G+ + ++ L+K+NL+Q+ ++ KE++A Sbjct: 100 FLPIDLGCE--CLVFIKIRKPVEPAEFIRRICKEALQLREKQTRFTQKLTPI-TYSVSASIDELKKLAHMVL---------EPHFHQKEGQKALK-------------FAIQVTRRNFNTLEKDDIIKTIATCVGHEYGHKVDLKNYDKLILVECFKNNVGMSVVSEYLPLEKFNLQQIFEKNMKENEA 263
BLAST of EWM28292.1 vs. NCBI_GenBank
Match: gi|1063242008|gb|ODQ64840.1| (hypothetical protein NADFUDRAFT_47403 [Nadsonia fulvescens var. elongata DSM 6958]) HSP 1 Score: 72.7886 bits (177), Expect = 8.442e-12 Identity = 57/193 (29.53%), Postives = 94/193 (48.70%), Query Frame = 0 Query: 1 MVPIETGCRGTCGVSIPKDGPLSPVKACIRMLEEAK-TGQSSTRGIIKLMPLERICFGGNLEALKREARDLLLEKGLIVEKEEHAEKASGQIGLESERKAVDSSSRPTYMVSLCRRNYAAHSRDEIFKTLGDVIGGRW--KVDLTCPDYVLLVEAIKGTIGVGIC-PRFIELKKYNLRQL---QDEARKEDQA 186 PI GC C + I P+ PV +R+ E K +G TR +L+P+ + GNL+ L + A D++L+ ES++K + RP RN+ +RDE+ + + + +G KVDL P+ V+LVE KG++G+ + P+F EL +YNL+ + Q+ + +D A Sbjct: 125 FTPISVGCE--CVLFIRTRKPVDPVDFSLRLCREMKESGSKRTRYTQRLIPVS-LTATGNLDELSKLA-DIVLKP---------------HFHQESDQKGYKFAIRPQ------NRNHNNMTRDEVIRKVAERVGNEHGHKVDLKHPEKVILVECFKGSVGMSVVDPQFDELDRYNLQTIFEKQNSLKLDDNA 292
BLAST of EWM28292.1 vs. NCBI_GenBank
Match: gi|695434318|ref|XP_009531396.1| (hypothetical protein PHYSODRAFT_466328, partial [Phytophthora sojae] >gi|348674148|gb|EGZ13967.1| hypothetical protein PHYSODRAFT_466328, partial [Phytophthora sojae]) HSP 1 Score: 70.0922 bits (170), Expect = 5.780e-11 Identity = 49/180 (27.22%), Postives = 88/180 (48.89%), Query Frame = 0 Query: 1 MVPIETGCRGTCGVSIPKDGPLSPVKACIRMLEEAK-TGQSSTRGIIKLMPLERICFGGNLEALKREARDLLLEKGLIVEKEEHAEKASGQIGLESERKAVDSSSRPTYMVSLCRRNYAAHSRDEIFKTLGDVIG-GRWKVDLTCPDYVLLVEAIKGTIGVGICPRFIELKKYNLRQLQD 178 P++TG +G + KD +SP ++ E+ + T ++R I+++ PLE++ + ++EA+K A ++ + H E + E+KA + + V RRN + ++ L +++G + KV+LT P VLL+E + T G I F KKYN+R + D Sbjct: 114 FTPLDTGVKGAILIQF-KDDTISPTALLSKIFEQVESTKDFASRFIMRMTPLEKVGYS-SVEAIKELAAPMI---------KTHLE------AFKEEQKAAGTDEPLEFAVEFKRRNCTNLNSMDVINGLVELVGEDKTKVNLTTPRSVLLIEVFRNTCGFSILTDFHRFKKYNVRSVID 276
BLAST of EWM28292.1 vs. NCBI_GenBank
Match: gi|566021878|gb|ETI44789.1| (hypothetical protein F443_10544 [Phytophthora parasitica P1569] >gi|570982594|gb|ETP42655.1| hypothetical protein F442_10440 [Phytophthora parasitica P10297]) HSP 1 Score: 70.0922 bits (170), Expect = 6.387e-11 Identity = 49/180 (27.22%), Postives = 88/180 (48.89%), Query Frame = 0 Query: 1 MVPIETGCRGTCGVSIPKDGPLSPVKACIRMLEEAKTGQS-STRGIIKLMPLERICFGGNLEALKREARDLLLEKGLIVEKEEHAEKASGQIGLESERKAVDSSSRPTYMVSLCRRNYAAHSRDEIFKTLGDVIG-GRWKVDLTCPDYVLLVEAIKGTIGVGICPRFIELKKYNLRQLQD 178 ++TG +G + KD +SP ++ EE ++ + ++R I +++PLE++ + ++EA+K A ++ + H E ++ERKA + V RRN + ++ L +++G + KV+LT P VL+VE + T G I F KKYN+R + D Sbjct: 113 FTALDTGVKGAVLIQF-KDDNVSPTALLSKIFEEVESSKDFASRFIQRMIPLEKVGYS-SVEAIKELAAPMI---------KAHLE------AFKAERKAAGKDEDFEFAVDFKRRNCTNLNSMDVINALVELVGEDKTKVNLTTPRSVLMVEVFRNTCGFSILTDFHRFKKYNVRSIID 275
BLAST of EWM28292.1 vs. NCBI_GenBank
Match: gi|1183364065|gb|ORX90736.1| (thump-domain-containing protein [Basidiobolus meristosporus CBS 931.73]) HSP 1 Score: 69.707 bits (169), Expect = 6.513e-11 Identity = 50/181 (27.62%), Postives = 88/181 (48.62%), Query Frame = 0 Query: 12 CGVSIPKDGPLSPVKACIRMLEEAK-TGQSSTRGIIKLMPLERICFGGNLEALKREARDLLLEKGLIVEKEEHAEKASGQIGLESERKAVDSSSRP-TYMVSLCRRNYAAHSRDEIFKTLGDVIGGRWKVDLTCPDYVLLVEAIKGTIGVGICPRFIELKKYNLRQLQDEARKEDQALQGK 190 C V I P+ P +L++ K TG TR ++L+P+ C+ N+ ++ A+ LL A G+ + P TY + RN + RDE+ K++ ++G + KV+L PD+V+++E K G+ + + ELKK+NL Q+ E+ K+ +A++ K Sbjct: 117 CVVFIKTKEPIVPTDLAAYILKDLKETGVKKTRFALRLIPISNTCYA-NMSDIEAAAKKLL------------APHFHGE------------NQEPVTYAIVPKIRNNSKIDRDELIKSVAGLVGDKHKVNLEKPDFVIIIEIFKSICGISVVKDYYELKKFNL-QVLFESLKQPKAVEDK 271
BLAST of EWM28292.1 vs. NCBI_GenBank
Match: gi|301107283|ref|XP_002902724.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262098598|gb|EEY56650.1| conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 69.707 bits (169), Expect = 1.047e-10 Identity = 52/180 (28.89%), Postives = 86/180 (47.78%), Query Frame = 0 Query: 1 MVPIETGCRGTCGVSIPKDGPLSPVKACIRMLEEAK-TGQSSTRGIIKLMPLERICFGGNLEALKREARDLLLEKGLIVEKEEHAEKASGQIGLESERKAVDSSSRPTYMVSLCRRNYAAHSRDEIFKTLGDVIGG-RWKVDLTCPDYVLLVEAIKGTIGVGICPRFIELKKYNLRQLQD 178 ++TG +G + KD LSP ++ EE + T ++R I +++PLE++ + ++EA+K A ++ + H E + E+KA + V RRN ++ TL D++G + KV+LT P VL+VE + T G I F KKYN+R + D Sbjct: 112 FTALDTGVKGAVLIQF-KDDRLSPTALLSKVFEEVESTKDFASRFIQRMIPLEKVGYS-SVEAIKELAGPMI---------KAHLE------AFKDEQKAAGKDETFEFAVEFKRRNCTNLISMDVIDTLVDLVGEEKTKVNLTAPRSVLMVEVFRNTCGFSILTDFHRFKKYNVRSIID 274
BLAST of EWM28292.1 vs. NCBI_GenBank
Match: gi|567987887|gb|ETL38178.1| (hypothetical protein L916_10206 [Phytophthora parasitica]) HSP 1 Score: 68.9366 bits (167), Expect = 1.882e-10 Identity = 48/180 (26.67%), Postives = 88/180 (48.89%), Query Frame = 0 Query: 1 MVPIETGCRGTCGVSIPKDGPLSPVKACIRMLEEAKTGQS-STRGIIKLMPLERICFGGNLEALKREARDLLLEKGLIVEKEEHAEKASGQIGLESERKAVDSSSRPTYMVSLCRRNYAAHSRDEIFKTLGDVIG-GRWKVDLTCPDYVLLVEAIKGTIGVGICPRFIELKKYNLRQLQD 178 ++TG +G + KD +SP ++ EE ++ + ++R I +++PLE++ + ++EA+K A ++ + H E ++E+KA + V RRN + ++ L +++G + KV+LT P VL+VE + T G I F KKYN+R + D Sbjct: 113 FTALDTGVKGAVLIQF-KDDNVSPTALLSKIFEEVESSKDFASRFIQRMIPLEKVGYS-SVEAIKELAAPMI---------KAHLE------AFKAEQKAAGKDEDFEFAVDFKRRNCTNLNSMDVINALVELVGEDKTKVNLTTPRSVLMVEVFRNTCGFSILTDFHRFKKYNVRSIID 275 The following BLAST results are available for this feature:
BLAST of EWM28292.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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