EWM30426.1, cds249 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM30426.1 vs. NCBI_GenBank
Match: gi|585113087|gb|EWM30426.1| (uncharacterized protein Naga_100210g9 [Nannochloropsis gaditana]) HSP 1 Score: 280.796 bits (717), Expect = 8.567e-96 Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 0
Query: 1 MASTDMSIQHGEIVFLHELVRSPEPYRRTRERSVRVTGRCVHVDTHQKRLIIQDRSNRLTVNIELIADQLFAIDGLYQFIGELREERGEVVMGGTTDDSCTVLRARVARAVDGLDMSLYEQSVRLRRAFLERHGLGQGK 139
MASTDMSIQHGEIVFLHELVRSPEPYRRTRERSVRVTGRCVHVDTHQKRLIIQDRSNRLTVNIELIADQLFAIDGLYQFIGELREERGEVVMGGTTDDSCTVLRARVARAVDGLDMSLYEQSVRLRRAFLERHGLGQGK
Sbjct: 1 MASTDMSIQHGEIVFLHELVRSPEPYRRTRERSVRVTGRCVHVDTHQKRLIIQDRSNRLTVNIELIADQLFAIDGLYQFIGELREERGEVVMGGTTDDSCTVLRARVARAVDGLDMSLYEQSVRLRRAFLERHGLGQGK 139
BLAST of EWM30426.1 vs. NCBI_GenBank
Match: gi|1009113782|ref|XP_015873333.1| (PREDICTED: uncharacterized protein LOC107410420 [Ziziphus jujuba] >gi|1009113784|ref|XP_015873334.1| PREDICTED: uncharacterized protein LOC107410420 [Ziziphus jujuba]) HSP 1 Score: 72.4034 bits (176), Expect = 9.928e-14 Identity = 49/129 (37.98%), Postives = 70/129 (54.26%), Query Frame = 0
Query: 1 MASTDMSIQHGEIVFLHELVRSPEPYRRTRERSVRVTGRCVHVDTHQKRLIIQDRSNRLTVNIELIADQLFAIDGLYQFIGELREERGEVVMGGTTDDSCTVLRARVARAVDGLDMSLYEQSVRLRRAF 129
MAS+ +I+ G +V L +L S + Y ++ S+RVTG+ II D S L +N + I D F + +YQFIGEL D+ VL+ARV R VDG+D++LY QS+RL + F
Sbjct: 1 MASS--AIKSGALVALQDLHPSSQYY--SQGTSLRVTGKLQEYSVETAIAIIADGSANLKINTQHIRDLNFRVGSIYQFIGELL----------IHTDNEAVLQARVGRNVDGMDLNLYHQSLRLLKQF 115
BLAST of EWM30426.1 vs. NCBI_GenBank
Match: gi|1173941392|gb|OQR90567.1| (hypothetical protein THRCLA_22535 [Thraustotheca clavata]) HSP 1 Score: 72.0182 bits (175), Expect = 1.064e-13 Identity = 43/124 (34.68%), Postives = 70/124 (56.45%), Query Frame = 0
Query: 8 IQHGEIVFLHELVRSPEPYRRTRERSVRVTGRCVHVDTHQKRLIIQDRSNRLTVNIELIADQLFAIDGLYQFIGELREERGEVVMGGTTDDSCTVLRARVARAVDGLDMSLYEQSVRLRRAFLE 131
+ GEIV + E++R R+RSVRVTGR D Q+ I +++ + V EL+++ + LYQFIGE E+ GE+ L+AR+ R VDGLD+ ++ ++++RR F++
Sbjct: 2 LAAGEIVQIDEILRDN-----MRDRSVRVTGRLDSFDASQRTASISFQNSSMKVTTELLSNVELNLGSLYQFIGETYEQNGEL-----------RLKARIGRNVDGLDIQMFLDALKIRREFIK 109
BLAST of EWM30426.1 vs. NCBI_GenBank
Match: gi|470392865|ref|XP_004334810.1| (Hypothetical protein ACA1_093430 [Acanthamoeba castellanii str. Neff] >gi|440791559|gb|ELR12797.1| Hypothetical protein ACA1_093430 [Acanthamoeba castellanii str. Neff]) HSP 1 Score: 71.633 bits (174), Expect = 2.839e-13 Identity = 48/127 (37.80%), Postives = 73/127 (57.48%), Query Frame = 0
Query: 6 MSIQHGEIVFLHELVRSPEPYRRTRERSVRVTGRCVHVDTHQKRLIIQD---RSNRLTVNIELIADQLFAIDGLYQFIGELREERGEVVMGGTTDDSCTVLRARVARAVDGLDMSLYEQSVRLRRAF 129
+ +Q G+I + E++ + + +SVRV G+ V D R++++ R++RLTV+ L+ A L+Q IGELR R E GG VL ARVAR VDGLD+ LY++++RL+R F
Sbjct: 12 VPLQFGQIKHIEEILAT----KDLNGQSVRVLGKVVEFDIPSNRVVLESPHGRTHRLTVDTRLLEAMPLATHSLFQVIGELR--RQEDQPGGY------VLEARVARNVDGLDIGLYDEALRLKRQF 126
BLAST of EWM30426.1 vs. NCBI_GenBank
Match: gi|1150731736|ref|XP_020276638.1| (CST complex subunit TEN1 [Asparagus officinalis]) HSP 1 Score: 71.2478 bits (173), Expect = 3.300e-13 Identity = 47/131 (35.88%), Postives = 72/131 (54.96%), Query Frame = 0
Query: 1 MASTDMSIQHGEIVFLHELVRSPEPYRRTRERSVRVTGRCVHVDTHQKRLIIQDRSNRLTVNIELIADQLFAIDGLYQFIGELREERGEVVMGGTTDDSCTVLRARVARAVDGLDMSLYEQSVRLRRAFLE 131
MA +D I+ G++V LHEL S ++ S+RVTG+ II D L +N + + + ID +YQFIGEL+ + ++ +L+ARV R VDG+D++LY Q+++LRR F E
Sbjct: 1 MAPSD--IKPGKLVALHELEASSPFFKHGS--SLRVTGKLQAHSVETGIAIITDGGVSLKINTKHLTNLSLRIDSIYQFIGELQIQ----------SENDAILQARVGRNVDGIDLNLYYQTMKLRRKFEE 117
BLAST of EWM30426.1 vs. NCBI_GenBank
Match: gi|743883021|ref|XP_011036913.1| (PREDICTED: uncharacterized protein LOC105134261 isoform X3 [Populus euphratica]) HSP 1 Score: 70.8626 bits (172), Expect = 3.684e-13 Identity = 46/128 (35.94%), Postives = 69/128 (53.91%), Query Frame = 0
Query: 6 MSIQHGEIVFLHELVRSPEPYRRTRERSVRVTGRCVHVDTHQKRLIIQDRSNRLTVNIELIADQLFAIDGLYQFIGELREERGEVVMGGTTDDSCTVLRARVARAVDGLDMSLYEQSVRLRRAFLERH 133
M+I+HGE+V L EL S P+ + + SVRVTG+ ++ D + L ++ + + D F + +YQFIGEL + DS +L+ARV R DG+D+SLY QS++L R H
Sbjct: 1 MAIKHGELVTLEELNPS-SPFFK-QGASVRVTGKLQQYTVETAIAVVADGNATLKIDTQHLRDISFRMGSVYQFIGELLIQ----------PDSEAILQARVGRIADGIDLSLYPQSLQLLRQVQADH 116
BLAST of EWM30426.1 vs. NCBI_GenBank
Match: gi|1141982164|gb|ONK63387.1| (uncharacterized protein A4U43_C07F14600 [Asparagus officinalis]) HSP 1 Score: 70.8626 bits (172), Expect = 6.091e-13 Identity = 47/131 (35.88%), Postives = 72/131 (54.96%), Query Frame = 0
Query: 1 MASTDMSIQHGEIVFLHELVRSPEPYRRTRERSVRVTGRCVHVDTHQKRLIIQDRSNRLTVNIELIADQLFAIDGLYQFIGELREERGEVVMGGTTDDSCTVLRARVARAVDGLDMSLYEQSVRLRRAFLE 131
MA +D I+ G++V LHEL S ++ S+RVTG+ II D L +N + + + ID +YQFIGEL+ + ++ +L+ARV R VDG+D++LY Q+++LRR F E
Sbjct: 1 MAPSD--IKPGKLVALHELEASSPFFKHGS--SLRVTGKLQAHSVETGIAIITDGGVSLKINTKHLTNLSLRIDSIYQFIGELQIQ----------SENDAILQARVGRNVDGIDLNLYYQTMKLRRKFEE 117
BLAST of EWM30426.1 vs. NCBI_GenBank
Match: gi|1179530892|ref|XP_020686535.1| (CST complex subunit TEN1 [Dendrobium catenatum]) HSP 1 Score: 70.0922 bits (170), Expect = 7.548e-13 Identity = 48/129 (37.21%), Postives = 68/129 (52.71%), Query Frame = 0
Query: 1 MASTDMSIQHGEIVFLHELVRSPEPYRRTRERSVRVTGRCVHVDTHQKRLIIQDRSNRLTVNIELIADQLFAIDGLYQFIGELREERGEVVMGGTTDDSCTVLRARVARAVDGLDMSLYEQSVRLRRAF 129
MAS+ I+ G +V L EL S ++ + S+RVTG+ II D L ++ + + D F I+ +YQFIGEL D VL+AR+ R VDG+D++LY QS+RLRR F
Sbjct: 1 MASS--IIKPGLLVALQELQPSSPFFKEGQ--SIRVTGKLQSYSVESAIAIIVDGGATLLIDTQHLRDINFRINSIYQFIGELL----------IPHDGQVVLKARIGRNVDGIDLNLYHQSIRLRRKF 115
BLAST of EWM30426.1 vs. NCBI_GenBank
Match: gi|1021499872|ref|XP_016193216.1| (CST complex subunit TEN1 [Arachis ipaensis]) HSP 1 Score: 70.0922 bits (170), Expect = 8.245e-13 Identity = 49/130 (37.69%), Postives = 66/130 (50.77%), Query Frame = 0
Query: 6 MSIQHGEIVFLHELVRSPEPYRRTRERSVRVTGRCVHVDTHQKRLIIQDRSNRLTVNIELIADQLFAIDGLYQFIGEL--REERGEVVMGGTTDDSCTVLRARVARAVDGLDMSLYEQSVRLRRAFLERH 133
+ I+ G +V L EL S +++ S+RVTG+ I D S+ L VN E + D F + +YQFIGEL R E E VL+ARV R VDG+D++LY QS+ L R F H
Sbjct: 4 IEIKSGALVTLQELNHSSPFFKQGA--SLRVTGKLQEYTLETALATIVDGSDFLKVNTEHLRDLTFKVGSIYQFIGELQIRSENNE-----------GVLQARVGRNVDGIDLNLYHQSLLLLRQFQANH 120
BLAST of EWM30426.1 vs. NCBI_GenBank
Match: gi|1150134952|ref|XP_020211010.1| (CST complex subunit TEN1 [Cajanus cajan]) HSP 1 Score: 69.707 bits (169), Expect = 1.055e-12 Identity = 49/133 (36.84%), Postives = 70/133 (52.63%), Query Frame = 0
Query: 1 MASTDMSIQHGEIVFLHELVRSPEPYRRTRERSVRVTGRCVHVDTHQKRLIIQDRSNRLTVNIELIADQLFAIDGLYQFIGELREERGEVVMGGTTDDSCTVLRARVARAVDGLDMSLYEQSVRLRRAFLERH 133
MAS + I+ G +V L +L R P+ + + S+R+ G+ T II D + L VN E + D +F + +YQFIGEL D+ VL+ARV R VDG+D++LY QS+ L R F H
Sbjct: 1 MAS--LEIKSGALVSLQDL-RPSSPFFK-QGASLRIIGKLQEYSTETGLAIIIDGDDILKVNTEHLRDLIFHVGSVYQFIGELL----------IQPDNEGVLQARVGRNVDGIDLNLYHQSLLLLRQFQANH 119 The following BLAST results are available for this feature:
BLAST of EWM30426.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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