EWM28179.1, cds2489 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM28179.1 vs. NCBI_GenBank
Match: gi|585110524|gb|EWM28179.1| (hypothetical protein Naga_100004g139 [Nannochloropsis gaditana]) HSP 1 Score: 603.979 bits (1556), Expect = 0.000e+0 Identity = 291/291 (100.00%), Postives = 291/291 (100.00%), Query Frame = 0
Query: 1 MTVTQNQEGNLMANSRVYLLWQRRQRAGRELGRPAKSFFFEEDETHTSYVHVAYHYYDKYKQAMFDVTGLEVVILIGAASFLLGKKEVPQLARIVGRGTGKLVALLNTAREQFVDATQNTHLSKLTDEVRQNMNELNSIRSEVRAAGLRPSRRMPTSEAVSKLTSPLQPEKEMSSFPKPSASSCGKQEGSSFFLGKSSGSKFSKIDLDKKRKLGELAIAELLLQESVLGKEGGTLCRSQKKLVVSPHAKAGSAVLDDVIFENLLWNQMDHTLKINEGGKVPDVPPQKDCAT 291
MTVTQNQEGNLMANSRVYLLWQRRQRAGRELGRPAKSFFFEEDETHTSYVHVAYHYYDKYKQAMFDVTGLEVVILIGAASFLLGKKEVPQLARIVGRGTGKLVALLNTAREQFVDATQNTHLSKLTDEVRQNMNELNSIRSEVRAAGLRPSRRMPTSEAVSKLTSPLQPEKEMSSFPKPSASSCGKQEGSSFFLGKSSGSKFSKIDLDKKRKLGELAIAELLLQESVLGKEGGTLCRSQKKLVVSPHAKAGSAVLDDVIFENLLWNQMDHTLKINEGGKVPDVPPQKDCAT
Sbjct: 1 MTVTQNQEGNLMANSRVYLLWQRRQRAGRELGRPAKSFFFEEDETHTSYVHVAYHYYDKYKQAMFDVTGLEVVILIGAASFLLGKKEVPQLARIVGRGTGKLVALLNTAREQFVDATQNTHLSKLTDEVRQNMNELNSIRSEVRAAGLRPSRRMPTSEAVSKLTSPLQPEKEMSSFPKPSASSCGKQEGSSFFLGKSSGSKFSKIDLDKKRKLGELAIAELLLQESVLGKEGGTLCRSQKKLVVSPHAKAGSAVLDDVIFENLLWNQMDHTLKINEGGKVPDVPPQKDCAT 291
BLAST of EWM28179.1 vs. NCBI_GenBank
Match: gi|585110525|gb|EWM28180.1| (hypothetical protein Naga_100004g139 [Nannochloropsis gaditana]) HSP 1 Score: 310.457 bits (794), Expect = 6.349e-104 Identity = 162/185 (87.57%), Postives = 162/185 (87.57%), Query Frame = 0
Query: 63 AMFDVTGLEVVILIGAASFLLGK-----------------------KEVPQLARIVGRGTGKLVALLNTAREQFVDATQNTHLSKLTDEVRQNMNELNSIRSEVRAAGLRPSRRMPTSEAVSKLTSPLQPEKEMSSFPKPSASSCGKQEGSSFFLGKSSGSKFSKIDLDKKRKLGELAIAELLLQ 224
AMFDVTGLEVVILIGAASFLLGK KEVPQLARIVGRGTGKLVALLNTAREQFVDATQNTHLSKLTDEVRQNMNELNSIRSEVRAAGLRPSRRMPTSEAVSKLTSPLQPEKEMSSFPKPSASSCGKQEGSSFFLGKSSGSKFSKIDLDKKRKLGELAIAELLLQ
Sbjct: 13 AMFDVTGLEVVILIGAASFLLGKDLVCFYSHLCPFDSSHFTLFPGKKEVPQLARIVGRGTGKLVALLNTAREQFVDATQNTHLSKLTDEVRQNMNELNSIRSEVRAAGLRPSRRMPTSEAVSKLTSPLQPEKEMSSFPKPSASSCGKQEGSSFFLGKSSGSKFSKIDLDKKRKLGELAIAELLLQ 197
BLAST of EWM28179.1 vs. NCBI_GenBank
Match: gi|675183657|ref|XP_008900713.1| (hypothetical protein PPTG_08388 [Phytophthora parasitica INRA-310] >gi|566030638|gb|ETI53549.1| hypothetical protein F443_03533 [Phytophthora parasitica P1569] >gi|567968282|gb|ETK93425.1| hypothetical protein L915_03415 [Phytophthora parasitica] >gi|567996732|gb|ETL46834.1| hypothetical protein L916_03368 [Phytophthora parasitica] >gi|568098915|gb|ETN13633.1| hypothetical protein PPTG_08388 [Phytophthora parasitica INRA-310] >gi|570958380|gb|ETP23359.1| hypothetical protein F441_03527 [Phytophthora parasitica CJ01A1] >gi|570994159|gb|ETP51351.1| hypothetical protein F442_03516 [Phytophthora parasitica P10297] >gi|970628991|gb|KUF76407.1| Sulfatase protein [Phytophthora nicotianae]) HSP 1 Score: 75.0998 bits (183), Expect = 1.275e-12 Identity = 60/173 (34.68%), Postives = 94/173 (54.34%), Query Frame = 0
Query: 72 VVILIGAASFLLGKKEVPQLARIVGRGTGKLVALLNTAREQFVDATQNTHLSKLTDEVRQNMNELNSIRSEVRAAGLRPSRRMPTSEAVSKLTSPLQPEKEMSSFPKPSASSCGKQEGSSFFLGKSSGSKFSKIDL---DKKRKLGE--LAIAELLLQES------VLGKEGG 233
V + + +SFLLG++E+P++ R VG +G+ V + A+++F DAT++ + KL E ++ + ELN IRSE+ + G PTS+AV + T+P +++ P AS Q +S G+SS S S + D R+ E LA+AEL L E V +EGG
Sbjct: 7 VFVTVTMSSFLLGRRELPKIGRFVGVYSGRSVGAILRAKKEFFDATKDNDIVKLQREFQRGIEELNEIRSELTSVGSMRRPLQPTSDAVPR-TAPRGTANHLAA-AAPGASEPAVQTSTSPAGGRSSVSLASANEYEMQDGVRRSAEASLAMAELKLAEQNKFAPRVESQEGG 177
BLAST of EWM28179.1 vs. NCBI_GenBank
Match: gi|568056397|gb|ETM53109.1| (hypothetical protein L914_03394 [Phytophthora parasitica] >gi|570334286|gb|ETO82234.1| hypothetical protein F444_03602 [Phytophthora parasitica P1976]) HSP 1 Score: 75.0998 bits (183), Expect = 1.533e-12 Identity = 60/173 (34.68%), Postives = 94/173 (54.34%), Query Frame = 0
Query: 72 VVILIGAASFLLGKKEVPQLARIVGRGTGKLVALLNTAREQFVDATQNTHLSKLTDEVRQNMNELNSIRSEVRAAGLRPSRRMPTSEAVSKLTSPLQPEKEMSSFPKPSASSCGKQEGSSFFLGKSSGSKFSKIDL---DKKRKLGE--LAIAELLLQES------VLGKEGG 233
V + + +SFLLG++E+P++ R VG +G+ V + A+++F DAT++ + KL E ++ + ELN IRSE+ + G PTS+AV + T+P +++ P AS Q +S G+SS S S + D R+ E LA+AEL L E V +EGG
Sbjct: 21 VFVTVTMSSFLLGRRELPKIGRFVGVYSGRSVGAILRAKKEFFDATKDNDIVKLQREFQRGIEELNEIRSELTSVGSMRRPLQPTSDAVPR-TAPRGTANHLAA-AAPGASEPAVQTSTSPAGGRSSVSLASANEYEMQDGVRRSAEASLAMAELKLAEQNKFAPRVESQEGG 191
BLAST of EWM28179.1 vs. NCBI_GenBank
Match: gi|568025945|gb|ETL99946.1| (hypothetical protein L917_03294 [Phytophthora parasitica]) HSP 1 Score: 74.7146 bits (182), Expect = 1.795e-12 Identity = 56/159 (35.22%), Postives = 89/159 (55.97%), Query Frame = 0
Query: 72 VVILIGAASFLLGKKEVPQLARIVGRGTGKLVALLNTAREQFVDATQNTHLSKLTDEVRQNMNELNSIRSEVRAAGLRPSRRMPTSEAVSKLTSPLQPEKEMSSFPKPSASSCGKQEGSSFFLGKSSGSKFSKIDL---DKKRKLGE--LAIAELLLQE 225
V + + +SFLLG++E+P++ R VG +G+ V + A+++F DAT++ + KL E ++ + ELN IRSE+ + G PTS+AV + T+P +++ P AS Q +S G+SS S S + D R+ E LA+AEL L E
Sbjct: 7 VFVTVTMSSFLLGRRELPKIGRFVGVYSGRSVGAILRAKKEFFDATKDNDIVKLQREFQRGIEELNEIRSELTSVGSMRRPLQPTSDAVPR-TAPRGTANHLAA-AAPGASEPAVQTSTSPAGGRSSVSLASANEYEMQDGVRRSAEASLAMAELKLAE 163
BLAST of EWM28179.1 vs. NCBI_GenBank
Match: gi|1214703948|gb|OWZ15880.1| (Sulfatase [Phytophthora megakarya]) HSP 1 Score: 73.1738 bits (178), Expect = 6.565e-12 Identity = 57/171 (33.33%), Postives = 89/171 (52.05%), Query Frame = 0
Query: 72 VVILIGAASFLLGKKEVPQLARIVGRGTGKLVALLNTAREQFVDATQNTHLSKLTDEVRQNMNELNSIRSEVRAAG-----LRPSRRMPTSEA-------VSKLTSPLQPEKEMSSFPKPSASSCGKQEGSSFFLGKSSGSKFSKIDL---DKKRKLGE--LAIAELLLQE 225
V + + AASFLLG++E+P++ R VG +G+ V + A+++F DAT++ L KL E ++ + ELN IRSE+ + G L+P+ P+S A + T P P ++S+ P G+SS S S ++ D R+ E LA+AEL L E
Sbjct: 7 VFVTVTAASFLLGRRELPKIGRFVGLYSGRSVGAIIRAKKEFFDATKDNDLVKLQREFQRGIEELNEIRSELTSVGSMRRPLQPTGSAPSSTASGTVIRSAAGTTVPNVPTAQVSTSP---------------LGGRSSVSLASTVEYEMQDGVRRSAEASLAMAELKLAE 162
BLAST of EWM28179.1 vs. NCBI_GenBank
Match: gi|299470224|emb|CBN79528.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 72.0182 bits (175), Expect = 3.692e-11 Identity = 33/83 (39.76%), Postives = 56/83 (67.47%), Query Frame = 0
Query: 64 MFDVTGLEVVILIGAASFLLGKKEVPQLARIVGRGTGKLVALLNTAREQFVDATQNTHLSKLTDEVRQNMNELNSIRSEVRAA 146
MFDV E+V++ GAA LLGK+++P + R+ GRG GK+ L+ R + + +Q + L +L +E+R N+++L I++E+R A
Sbjct: 1 MFDVGMAEMVVIGGAAILLLGKRDMPLVFRLAGRGVGKVSGLVQGGRARMNELSQGSDLLQLQNEIRSNLDDLRVIKAELRGA 83
BLAST of EWM28179.1 vs. NCBI_GenBank
Match: gi|695457475|ref|XP_009537205.1| (hypothetical protein PHYSODRAFT_306726 [Phytophthora sojae] >gi|348667814|gb|EGZ07639.1| hypothetical protein PHYSODRAFT_306726 [Phytophthora sojae]) HSP 1 Score: 68.9366 bits (167), Expect = 2.516e-10 Identity = 38/107 (35.51%), Postives = 60/107 (56.07%), Query Frame = 0
Query: 72 VVILIGAASFLLGKKEVPQLARIVGRGTGKLVALLNTAREQFVDATQNTHLSKLTDEVRQNMNELNSIRSEVRAAGLRPSRRMPTSEAVSKLTSPLQPEKEMSSFPK 178
V + + A+SFLLG++E+P++ R +G +G+ V + A+++F DAT++ L KL E ++ + ELN IRSE+ G + PLQP SS PK
Sbjct: 7 VFVTVTASSFLLGRRELPKIGRFLGLYSGRSVGAILRAKKEFFDATKDNDLVKLQREFQRGIEELNEIRSELTTVG--------------NMRRPLQPSGVPSSAPK 99
BLAST of EWM28179.1 vs. NCBI_GenBank
Match: gi|1028942038|ref|XP_016714236.1| (PREDICTED: sec-independent protein translocase protein TatB-like [Gossypium hirsutum]) HSP 1 Score: 67.3958 bits (163), Expect = 1.186e-9 Identity = 30/85 (35.29%), Postives = 56/85 (65.88%), Query Frame = 0
Query: 64 MFDVTGLEVVILIGAASFLLGKKEVPQLARIVGRGTGKLVALLNTAREQFVDATQNTHLSKLTDEVRQNMNELNSIRSEVRAAGL 148
MF ++ E+ +LIGA + L+G K++P++A++ GR G+ + + AR QF +A Q + ++T E++ M +L++IR E+R+ L
Sbjct: 1 MFGISYGELFLLIGATAALVGPKDLPKIAKVAGRFAGRSIGYVQLARGQFDNAMQQSQARQVTKELQDTMAQLDAIRHEIRSLSL 85
BLAST of EWM28179.1 vs. NCBI_GenBank
Match: gi|698783269|ref|XP_009824678.1| (hypothetical protein H257_02645 [Aphanomyces astaci] >gi|574120728|gb|ETV86206.1| hypothetical protein H257_02645 [Aphanomyces astaci]) HSP 1 Score: 65.4698 bits (158), Expect = 4.172e-9 Identity = 35/116 (30.17%), Postives = 67/116 (57.76%), Query Frame = 0
Query: 67 VTGLEVVILIGAASFLLGKKEVPQLARIVGRGTGKLVALLNTAREQFVDATQNTHLSKLTDEVRQNMNELNSIRSEVRAAGLRPSRRMPTSEAVSKLTSPLQPEKEMSSFPKPSAS 182
V+ E+ I+I A +L+G+KE+P++A++ GR G+ V + A+ ++ +AT+N+ L K+ E+++ ++ELN IRSE+ +S + P +P ++ P +AS
Sbjct: 2 VSWAEIGIVIVAGGYLIGRKELPRMAKMGGRYVGRTVGAVLRAKNEYFEATKNSDLVKMQSELQKGLDELNQIRSEM--------------TTISSMKRPYRPVSTPANRPPATAS 103 The following BLAST results are available for this feature:
BLAST of EWM28179.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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